Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 521 238.2 12299412 96.0% 11807435 93.0

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output
GCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAGAAATCGAACCACTCGACCAGATTACCTGAAGAGGCCCCCACAATCGCCCAAATGC  >  NC_000913/2723523‑2723708
                                                                                             |                                                                                            
GCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGAT                                                                                              <  SRR4302532.5447206/94‑1 (MQ=60)
GCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGAC                                                                                              <  SRR4302532.1621139/94‑1 (MQ=60)
 CCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGACG                                                                                             >  SRR4302532.4642684/1‑94 (MQ=60)
  TAACCGCCTATTGGGCGCATCAGGAATCCGCCAGCAAAAATACCTGCTTGTTGTAGTAGTTTAGTCGTCGTGTTCCCGGAAGGGATGAAGATGT                                                                                            >  SRR4302532.1187758/1‑94 (MQ=60)
  CAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGACGT                                                                                            <  SRR4302532.1500837/94‑1 (MQ=60)
    ACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGGAGAAGACGTGG                                                                                          >  SRR4302532.4143458/1‑94 (MQ=60)
    ACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGG                                                                                          >  SRR4302532.134744/1‑94 (MQ=60)
    ACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGACGTGG                                                                                          <  SRR4302532.2949841/94‑1 (MQ=60)
     CCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGACGTGGG                                                                                         >  SRR4302532.1033901/1‑94 (MQ=60)
     CCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGACGCGGG                                                                                         >  SRR4302532.5728926/1‑94 (MQ=60)
       GCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGACGTGGGCA                                                                                       >  SRR4302532.5140455/1‑94 (MQ=60)
       GCCTATTGGGCGCATAAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGACGTGGGCA                                                                                       >  SRR4302532.996413/1‑94 (MQ=60)
         CTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAA                                                                                     >  SRR4302532.5733769/1‑94 (MQ=60)
         CTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGACGTGGGCAAA                                                                                     >  SRR4302532.3425386/1‑94 (MQ=60)
          TATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGACGTGGGCAAAG                                                                                    <  SRR4302532.5931848/94‑1 (MQ=60)
           ATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGACGTGGGCAAAGT                                                                                   <  SRR4302532.4424653/94‑1 (MQ=60)
           ATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTGCCCGGAAGGGAAGAAGACGTGGGCAAAGT                                                                                   <  SRR4302532.2533830/94‑1 (MQ=60)
            TTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTA                                                                                  <  SRR4302532.234550/94‑1 (MQ=60)
             TGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGACGTGGGCAAAGTAG                                                                                 >  SRR4302532.3123995/1‑94 (MQ=60)
             TGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGACGTGGGCAAAGTAG                                                                                 <  SRR4302532.656691/94‑1 (MQ=60)
              GGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGA                                                                                <  SRR4302532.4429110/94‑1 (MQ=60)
              GGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGACGTGGGCAAAGTAGA                                                                                <  SRR4302532.780296/94‑1 (MQ=60)
               GGCGTGTCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAG                                                                               <  SRR4302532.4410386/94‑1 (MQ=60)
               GGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGACGTGGGCAAAGTAGAG                                                                               <  SRR4302532.2606967/94‑1 (MQ=60)
                 CGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGACGTGGGCAAAGTAGAGTG                                                                             <  SRR4302532.3655473/94‑1 (MQ=60)
                  GCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGA                                                                            >  SRR4302532.106989/1‑94 (MQ=60)
                   CATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGAA                                                                           <  SRR4302532.5923464/94‑1 (MQ=60)
                    ATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGACGTGGGCAAAGTAGAGTGAAC                                                                          >  SRR4302532.841643/1‑94 (MQ=60)
                      CAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGACGTGGGCAAAGTAGAGTGAACAG                                                                        >  SRR4302532.6178695/1‑94 (MQ=60)
                       AGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGACGTGGGCAAAGTAGAGTGAACAGA                                                                       >  SRR4302532.5604284/1‑94 (MQ=60)
                       AGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGACGTGGGCAAAGTAGAGTGAACAGA                                                                       >  SRR4302532.3726012/1‑94 (MQ=60)
                         GAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGACGTGGGCAAAGTAGAGAGAACAGAAC                                                                     >  SRR4302532.3784092/1‑94 (MQ=60)
                           ATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGACGTGGGCAAAGTAGAGTGAACAGAACGG                                                                   >  SRR4302532.4730271/1‑94 (MQ=60)
                           ATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGACGTGGGCAAAGTAGAGTGAACAGAACGA                                                                   >  SRR4302532.4039354/1‑94 (MQ=60)
                           ATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGACGTGGGCAAAGTAGAGTGAACAGAACGA                                                                   <  SRR4302532.1401578/94‑1 (MQ=60)
                            TCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGAACGAG                                                                  <  SRR4302532.279049/94‑1 (MQ=60)
                             CCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGAACGAGA                                                                 >  SRR4302532.5251183/1‑94 (MQ=60)
                             CCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGAACGAGA                                                                 >  SRR4302532.4230204/1‑94 (MQ=60)
                               CGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGAACGAGaaa                                                               >  SRR4302532.3763908/1‑91 (MQ=60)
                               CGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGAACGAGTAG                                                               <  SRR4302532.1083072/94‑1 (MQ=60)
                               CGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGACGTGGGCAAAGTAGAGTGAACAGAACGAGTAG                                                               <  SRR4302532.2913754/94‑1 (MQ=60)
                               CGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGACGTGGGCAAAGTAGAGTGAACAGAACGAGTAG                                                               >  SRR4302532.215000/1‑94 (MQ=60)
                                 CAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGACGTGGGCAAAGTAGAGTGAACAGAACGAGTAGAC                                                             <  SRR4302532.905903/94‑1 (MQ=60)
                                 CAGCAAAAACACCTGCTGTTTGTAGGAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGAACGAGAAGAC                                                             >  SRR4302532.695595/1‑94 (MQ=60)
                                   GCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTCAACAGAACGAGTAGACAT                                                           >  SRR4302532.5038212/1‑94 (MQ=60)
                                   GCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGACGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACAT                                                           <  SRR4302532.5718829/94‑1 (MQ=60)
                                    CAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGACGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATA                                                          >  SRR4302532.4859779/1‑94 (MQ=60)
                                    CAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATA                                                          >  SRR4302532.3870531/1‑94 (MQ=60)
                                    CAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGACGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATA                                                          >  SRR4302532.2513787/1‑94 (MQ=60)
                                     AAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAG                                                         <  SRR4302532.5386945/94‑1 (MQ=60)
                                     AAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGACGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAG                                                         >  SRR4302532.1966274/1‑94 (MQ=60)
                                      AAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGACGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAGA                                                        <  SRR4302532.1516921/94‑1 (MQ=60)
                                       AAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGACGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAGAA                                                       <  SRR4302532.6191550/94‑1 (MQ=60)
                                       AAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGACGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAGAA                                                       <  SRR4302532.1527425/94‑1 (MQ=60)
                                         ACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAGAAAT                                                     >  SRR4302532.863932/1‑94 (MQ=60)
                                         ACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGACGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAGAAAT                                                     <  SRR4302532.5851393/94‑1 (MQ=60)
                                             CTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGACGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAGAAATCGAA                                                 >  SRR4302532.2726835/1‑94 (MQ=60)
                                              TGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAGAAATCGAAC                                                <  SRR4302532.5636059/94‑1 (MQ=60)
                                               GCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAGAAATCGAACC                                               >  SRR4302532.2536620/1‑94 (MQ=60)
                                                 TGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGACGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAGAAATCGAACCAC                                             <  SRR4302532.1823923/94‑1 (MQ=60)
                                                  GTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGACGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAGAAATCGAAACACT                                            >  SRR4302532.2887356/1‑94 (MQ=60)
                                                    TTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAGAAATCGAACCACTCG                                          <  SRR4302532.3049635/94‑1 (MQ=60)
                                                    TTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGACGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAGAAATCGAACCACTCG                                          <  SRR4302532.6301778/94‑1 (MQ=60)
                                                     TGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGACGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAGAAATCGAACCACTCGA                                         >  SRR4302532.2144745/1‑94 (MQ=60)
                                                       TAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGACGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAGAAATCGAACCACTCGACC                                       >  SRR4302532.3869753/1‑94 (MQ=60)
                                                        AGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAGAAATCGAACCACTCGACCA                                      >  SRR4302532.989249/1‑94 (MQ=60)
                                                         GTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGACGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAGAAATCGAACCACTCGACCAG                                     <  SRR4302532.1477675/94‑1 (MQ=60)
                                                             TTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAGAAATCGAACCACTCGACCAGATTA                                 >  SRR4302532.2222353/1‑94 (MQ=60)
                                                                 GTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAGAAATCGAACCACTCGACCAGATTACCTG                             <  SRR4302532.1126857/94‑1 (MQ=60)
                                                                 GTCGTCGTGTTCCCGGAAGGGAAGAAGACGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAGAAATCGAACCACTCGACCAGATTACCTG                             <  SRR4302532.3924713/94‑1 (MQ=60)
                                                                   CGTCGTGTTCCCGGAAGGGAAGAAGACGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAGAAATCGAACCACTCGACCAGATTACCTGAA                           >  SRR4302532.4787926/1‑94 (MQ=60)
                                                                    GTCGTGTTCCCGGAAGGGAAGAAGACGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAGAAATCGAACCACTCGACCAGATTACCTGAAG                          <  SRR4302532.725143/94‑1 (MQ=60)
                                                                     TCGTGTTCCCGGAAGGGAAGAAGGTGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAGAAATCGAACCACTCGACCAGATTACCTGAAGA                         <  SRR4302532.4641179/94‑1 (MQ=60)
                                                                      CGTGTTCCCGGAAGGGAAGGAGACGGGGGCAAAGTAGAGTGAACAGAAGGAGTAGACATAGAAATCGAACCACTCGACCAGGATACCTGAAGAG                        >  SRR4302532.1686149/1‑94 (MQ=60)
                                                                      CGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAGAAATCGAACCACTCGACCAGATTACCTGAAGAG                        <  SRR4302532.5659653/94‑1 (MQ=60)
                                                                      CGTGTTCCCGGAAGGGAAGAAGACGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAGAAATCGAACCACTCGACCAGATTACCTGAAGAG                        <  SRR4302532.896301/94‑1 (MQ=60)
                                                                      CGTGTCCCCGGAAGGGAAGAAGACGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAGAAATCGAACCACTCGACCAGATTACCTGAAGAG                        <  SRR4302532.25636/94‑1 (MQ=60)
                                                                         GTTCCCGGAAGGGAAGAAGACGTGGGCAAAGTAGAGTGAACAGAACGAGTAAACATAGAAATCGAACCACTCGACCAGATTACCTGAAGAGGCC                     <  SRR4302532.4787210/94‑1 (MQ=60)
                                                                           TCCCGGAAGGGAAGAATACGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAGAAATCGAACCACTCGACCAGATTACCTGAAGAGGCCCC                   <  SRR4302532.4674170/94‑1 (MQ=60)
                                                                           TCCCGGAAGGGAAGAAGACGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAGAAATCGAACCACTCGACCAGATTACCTGAAGAGGCCCC                   <  SRR4302532.3502112/94‑1 (MQ=60)
                                                                            CCCGGAAGGGAAGAAGACGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAGAAATCGAACCACTCGACCAGATTACCTGAAGAGGCCCCC                  >  SRR4302532.804449/1‑94 (MQ=60)
                                                                             CCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAGAAATCGAACCACTCGACCAGATTACCTGAAGAGGCCCCCA                 <  SRR4302532.2031969/94‑1 (MQ=60)
                                                                              CGGAAGGGAAGAAGACGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAGAAATCGAACCACTCGACCAGATTACCTGAAGAGGCCCCCAC                >  SRR4302532.1770902/1‑94 (MQ=60)
                                                                                     GAAGAAGACGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAGAAATCGAACCACTCGACCAGATTACCTGAAGAGGCCCCCACAATCGCC         >  SRR4302532.2350188/1‑94 (MQ=60)
                                                                                       AGAAGATGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAGAAATCGAACCACTCGACCAGATTACCTGAAGAGGCCCCCACAATCGCCCA       >  SRR4302532.1514592/1‑94 (MQ=60)
                                                                                        GAAGACGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAGAAATCGAACCACTCGACCAGATTACCTGAAGAGGCCCCCACAATCGCCCAA      >  SRR4302532.2142445/1‑94 (MQ=60)
                                                                                        GAAGACGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAGAAATCGAACCACTCGACCAGATTACCTGAAGAGGCCCCCACAATCGCCCAA      >  SRR4302532.463484/1‑94 (MQ=60)
                                                                                          AGATGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAGAAATCGAACCACTCGACCAGATTACCTGAAGAGGCCCCCACAATCGCCCAAAT    <  SRR4302532.4623880/94‑1 (MQ=60)
                                                                                          AGACGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAGAAATCGAACCACTCGACCAGATTACCTGAAGAGGCCCCCACAATCGCCCAAAT    <  SRR4302532.647818/94‑1 (MQ=60)
                                                                                          AGACGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAGAAATCGAACCACTCGACCAGATTACCTGAAGAGGCCCCCACAATCGCCCAAAT    >  SRR4302532.1260525/1‑94 (MQ=60)
                                                                                          AGACGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAGAAATCGAACCACTCGACCAGATTACCTGAAGAGGCCCCCACAATCGCCCAAAT    >  SRR4302532.3990304/1‑94 (MQ=60)
                                                                                            ATGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAGAAATCGAACCACTCGACCAGATTACCTGAAGAGGCCCCCACAATCGCCCAAATGC  <  SRR4302532.730753/94‑1 (MQ=60)
                                                                                             |                                                                                            
GCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAGAAATCGAACCACTCGACCAGATTACCTGAAGAGGCCCCCACAATCGCCCAAATGC  >  NC_000913/2723523‑2723708

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑