Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 521 238.2 12299412 96.0% 11807435 93.0

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output
AGATTTTTGCCGACGTGTTCAACCTTCCGGCACGACGTAACGCCATTAACGGTTGTGCAAGCCTGGGGGCAGCGATTAATACAGCGGTAGGTCTGGGGCTATACCCGGATTACGCAACGGCTGTCGATAACATGGTTCGCGTGAAAGATATCTTTATACCGATTGAGAGCAATGCCAAACGCTAC  >  NC_000913/2901083‑2901267
                                                                                           |                                                                                             
AGATTTTTGCCGACGTGTTCAACCTTCCGGCACGACGTAACGCCATTAACGGTTGTGCAAGCCTGGGGGCAGCGATTAATACAGCGGTAGGTCG                                                                                             >  SRR4302532.1927793/1‑94 (MQ=60)
AGATTTTTGCCGACGTGTTCAACCTTCCGGCACGACGTAACGCCATTAACGGTTGTGCAAGCCTGGGGGCAGCGATTAATACAGCGGTAGGCCT                                                                                             <  SRR4302532.5266492/94‑1 (MQ=60)
AGATTTTTGCCGACGTGTTCAACCTTCCGGCACGACGTAACGCCATTAACGGTTGTGCAAGCCTGGGGGCAGCGATTAATACAGCGGTAGGCCT                                                                                             <  SRR4302532.6031840/94‑1 (MQ=60)
AGATTTTTGCCGACGTGTTCAACCTTCCGGCACGACGTAACGCCATTAACGGTTGTGCAAGCCTGGGGGCAGCGATTAATACAGCGGTAGGCCT                                                                                             <  SRR4302532.2684903/94‑1 (MQ=60)
 GATTTTTGCCGACGTGTTCACCCTGCCGGCACGACGTAACGCCATTAACGGTTGTGCAAGCCTGGGGGCAGCGATTAATACAGCGGTAGGCCTG                                                                                            <  SRR4302532.4634484/94‑1 (MQ=60)
  ATTTTTGCCGACGTGTTCAACCTTCCGGCACGACGTAACGCCATTAACGGTTGTGCAAGCCTGGGGGCAGCGATTAATACAGCGGTAGGTCTGG                                                                                           <  SRR4302532.2931289/94‑1 (MQ=60)
  ATTTTTGCCGACGTGTTCAACCTTCCGGCACGACGTAACGCCATTAACGGTTGTGCAAGCCTGGGGGCAGCGATTAATACAGCGGTAGGCCTGG                                                                                           >  SRR4302532.1963106/1‑94 (MQ=60)
  ATTTTTGCCGACGTGTTCAACCTTCCGGCACGACGTAACGCCATTAACGGTTGTGCAAGCCTGGGGGCAGCGATTAATACAGCGGTAGGCCTGG                                                                                           <  SRR4302532.5885906/94‑1 (MQ=60)
   TTTTTGCCGACGTGTTCAACCTTCCGGCACGACGTAACGCCATTAACGGTTGTGCAAGCCTGGGGGCAGCGATTAATACAGCGGTAGGTCTGGG                                                                                          <  SRR4302532.350908/94‑1 (MQ=60)
       TGCCGACGTGTTCAACCTTCCGGCACGACGTAACGCCATTAACGGTTGTGCAAGCCTGGGGGCAGCGATTAATACAGCGGTAGGTCTGGGGCTA                                                                                      >  SRR4302532.3952004/1‑94 (MQ=60)
         CCGACGTGTTCAACCTTCCGGCACGACGTAACGCCATTAACGGTTGTGCAAGCCTGGGGGCAGCGATTAATACAGCGGTAGGTCTGGGGCTATA                                                                                    >  SRR4302532.4111941/1‑94 (MQ=60)
         CCGACGTGTTCAACCTTCCGGCACGACGTAACGCCATTAACGGTTGTGCAAGCCTGGGGGCAGCGATTAATACAGCGGTAGGCCTGGGGCTATA                                                                                    >  SRR4302532.2650579/1‑94 (MQ=60)
          CGACGTGTTCAACCTTCCGGCACGACGTAACGCCATTAACGGTTGTGCAAGCCTGGGGGCAGCGATTAATACAGCGGTAGGTCTGGGGCTATAC                                                                                   >  SRR4302532.2822179/1‑94 (MQ=60)
          CGACGTGTTCAACCTTCCGGCACGACGTAACGCCATTAACGGTTGTGCAAGCCTGGGGGCAGCGATTAATACAGCGGTAGGCCTGGGGCTATAC                                                                                   <  SRR4302532.4556671/94‑1 (MQ=60)
           GACGTGTTCAACCTTCCGGCACGACGTAACGCCATTAACGGTTGTGCAAGCCTGGGGGCAGCGATTAATACAGCGGTAGGGCTGGGGCTATACC                                                                                  >  SRR4302532.5751812/1‑94 (MQ=60)
           GACGTGTTCAACCTTCCGGCACGACGTAACGCCATTAACGGTTGTGCAAGCCTGGGGGCAGCGATTAATACAGCGGTAGGCCTGGGGCTATACC                                                                                  >  SRR4302532.2626933/1‑94 (MQ=60)
           GACGTGTTCAACCTTCCGGCACGACGTAACGCCATTAACGGTTGTGCAAGCCTGGGGGCAGCGATTAATACAGCGGTAGGCCTGGGGCTATACC                                                                                  <  SRR4302532.4442252/94‑1 (MQ=60)
           GACGTGTTCAACCTTCCGGCACGACGTAACGCCATTAACGGTTGTGCAAGCCTGGGGGCAGCGATTAATACAGCGGTAGGCCTGGGGCTATACC                                                                                  >  SRR4302532.2833133/1‑94 (MQ=60)
            ACGTGTTCAACCTTCCGGCACGACGTAACGCCATTAACGGTTGTGCAAGCCTGGGGGCAGCGATTAATACAGCGGTAGGTCTGGGGCTATACCC                                                                                 <  SRR4302532.992606/94‑1 (MQ=60)
            ACGTGTTCAACCTTCCGGCACGACGTAACGCCATTAACGGTTGTGCAAGCCTGGGGGCAGCGATTAATACAGCGGTAGGCCTGGGGCTATACCC                                                                                 <  SRR4302532.5053980/94‑1 (MQ=60)
              GTGTTCAACCTTCCGGCACGACGTAACGCCATTAACGGTTGTGCAAGCCTGGGGGCGGCGATTAATACAGCGGTAGGTCTGGGGCTATACCCGG                                                                               <  SRR4302532.3424329/94‑1 (MQ=60)
              GTGTTCAACCTTCCGGCACGACGTAACGCCATTAACGGTTGTGCAAGCCTGGGGGCAGCGATTAATACAGCGGTAGGCCTGGGGCTATACCCGG                                                                               <  SRR4302532.3042295/94‑1 (MQ=60)
               TGTTCAACCTTCCGGCACGACGTAACGCCATTAACGGTTGTGCAAGCCTGGGGGCAGCGATTAATACAGCGGTAGGTCTGGGGCTATACCCGGA                                                                              >  SRR4302532.2140277/1‑94 (MQ=60)
               TGTTCAACCTTCCGGCACGACGTAACGCCATTAACGGTTGTGCAAGCCTGGGGGCAGCGATTAATACAGCGGTAGGTCTGGGGCTATACCCGGA                                                                              >  SRR4302532.2989196/1‑94 (MQ=60)
               TGTTCAACCTTCCGGCACGACGTAACGCCATTAACGGTTGTGCAAGCCTGGGGGCAGCGATTAATACAGCGGTAGGCCTGGGGCTATACCCGGA                                                                              >  SRR4302532.1949628/1‑94 (MQ=60)
                GTTCAACCTTCCGGCACGACGTAACGCCATTAACGGTTGTGCAAGCCTGGGGGCAGCGATTAATACAGCGGTAGGTCTGGGGCTATACCCGGAT                                                                             <  SRR4302532.5763946/94‑1 (MQ=60)
                GTTCAACCTTCCGGCACGACGTAACGCCATTAACGGTTGTGCAAGCCTGGGGGCAGCGATTAATACAGCGGTAGGCCTGGGGCTATACCCGGAT                                                                             >  SRR4302532.149358/1‑94 (MQ=60)
                GTTCAACCTTCCGGCACGACGTAACGCCATTAACGGTTGTGCAAGCCTGGGGGCAGCGATTAATACAGCGGTAGGCCTGGGGCTATACCCGGAT                                                                             <  SRR4302532.2303514/94‑1 (MQ=60)
                  TCAACCTTCCGGCACGACGTAACGCCATTAACGGTTGTGCAAGCCTGGGGGCAGCGATTAATACAGCGGTAGGTCTGGGGCTATACCCGGATTA                                                                           <  SRR4302532.2434436/94‑1 (MQ=60)
                      CCTTCCGGCACGACGTAACGCCATTAACGGTTGTGCAAGCCTGGGGGCAGCGATTAATACAGCGGTAGGCCTGGGGCTATACCCGGATTACGCA                                                                       >  SRR4302532.1790865/1‑94 (MQ=60)
                        TTCCGGCACGACGTAACGCCATTAACGGTTGTGCAAGCCTGGGGGCAGCGATTAATACAGCGGTAGGTCTGGGGCTATACCCGGATTACGCAAC                                                                     <  SRR4302532.4592027/94‑1 (MQ=60)
                         TCCTGCACGACGTAACGCCATTAACGGTTGTGCAAGCCTGGGGGCAGCGATTAATACAGCGGTAGGCCTGGGGCTATACCCGGATTACGCAACG                                                                    <  SRR4302532.6103514/94‑1 (MQ=60)
                         TCCGGCACGACGTAACGCCATTAACGGTTGTGCAAGCCTGGGGGCAGCGATTAATACAGCGGTAGGTCTGGGGCTATACCCGGATTACGCAACG                                                                    <  SRR4302532.2209852/94‑1 (MQ=60)
                         TCCGGCACGACGTAACGCCATTAACGGTTGTGCAAGCCTGGGGGCAGCGATTAATACAGCGGTAGGCCTGGGGCTATACCCGGATTACGCAACG                                                                    <  SRR4302532.2383849/94‑1 (MQ=60)
                          CCGGCACGACGTAACGCCATTAACGGTTGTGCAAGCCTGGGGGCAGCGATTAATACAGCGGTAGGTCTGGGGCTATACCCGGATTACGCAACGG                                                                   <  SRR4302532.2259616/94‑1 (MQ=60)
                          CCGGCACGACGTAACGCCATTAACGGTTGTGCAAGCCTGGGGGCAGCGATTAATACAGCGGTAGGCCTGGGGCTATACCCGGATTACGCAACGG                                                                   <  SRR4302532.1138591/94‑1 (MQ=60)
                           CGGCACGACGTAACGCCATTAACGGTTGTGCAAGCCTGGGGGCAGCGATTAATACAGCGGTAGGCCTGGGGCTATACCCGGATTACGCAACGGC                                                                  <  SRR4302532.5319681/94‑1 (MQ=60)
                            GGCACGACGTAACGCCATTAACGGTTGTGCAAGCCTGGGGGCAGCGATTAATACAGCGGTAGGCCTGGGGCTATACCCGGATTACGCAACGGCT                                                                 <  SRR4302532.2176699/94‑1 (MQ=60)
                             GCACGACGTAACGCCATTAACGGTTGTGCAAGCCTGGGGGCAGCGATTAATACAGCGGTAGGCCTGGGGCTATACCCGGATTACGCAACGGCTG                                                                <  SRR4302532.2275095/94‑1 (MQ=60)
                             GCACGACGTAACGCCATTAACGGTTGTGCAAGCCTGGGGGCAGCGATTAATACAGCGGTAGGCCTGGGGCTATACCCGGATTACGCAACGGCTG                                                                >  SRR4302532.4029863/1‑94 (MQ=60)
                              CACGACGTAACGCCATTAACGGTTGTGCAAGCCTGGGGGCAGCGATTAATACAGCGGTAGGCCTGGGGCTATACCCGGATTACGCAACGGCTGT                                                               <  SRR4302532.1547293/94‑1 (MQ=60)
                                CGACGTAACGCCATTAACGGTTGTGCAAGCCTGGGGGCAGCGATTAATACAGCGGTAGGCCTGGGGCTATACCCGGATTACGCAACGGCTGTCG                                                             <  SRR4302532.1692195/94‑1 (MQ=60)
                                   CGTAACGCCATTAACGGTTGTGCAAGCCTGGGGGCAGCGATTAATACAGCGGTAGGCCTGGGGCTATACCCGGATTACGCAACGGCTGTCGATA                                                          >  SRR4302532.1541258/1‑94 (MQ=60)
                                    GTAACGCCATTAACGGTTGTGCAAGCCTGGGGGCAGCGATTAATACAGCGGTAGGTCTGGGGCTATACCCGGATTACGCAACGGCTGTCGATAA                                                         <  SRR4302532.2805296/94‑1 (MQ=60)
                                     TAACGCCATTAACGGTTGTGCAAGCCTGGGGGCAGCGATTAATACAGCGGTAGGTCTGGGGCTATACCCGGATTACGCAACGGCTGTCGATAAC                                                        <  SRR4302532.4872353/94‑1 (MQ=60)
                                     TAACGCCATTAACGGTTGTGCAAGCCTGGGGGCAGCGATTAATACAGCGGTAGGTCTGGGGCTATACCCGGATTACGCAACGGCTGTCGATAAC                                                        <  SRR4302532.4872354/94‑1 (MQ=60)
                                     TAACGCCATTAACGGTTGTGCAAGCCTGGGGGCAGCGATTAATACAGCGGTAGGCCTGGGGCTATACCCGGATTACGCAACGGCTGTCGATAAC                                                        <  SRR4302532.3096215/94‑1 (MQ=60)
                                     TAACGCCATTAACGGTTGTGCAAGCCTGGGGGCAGCGATTAATACAGCGGCAGGTCTGGGGCTATACCCGGATTACGCAACGGCTGTCGATAAC                                                        >  SRR4302532.3263681/1‑94 (MQ=60)
                                      AACGCCATTAACGGTTGTGCAAGCCTGGGGGCAGCGATTAATACAGCGGTAGGCCTGGGGCTATACCCGGATTACGCAACGGCTGTCGATAACA                                                       <  SRR4302532.5878448/94‑1 (MQ=60)
                                       ACGCCATTAACGGTTGTGCAAGCCTGGGGGCAGCGATTAATACAGCGGTAGGCCTGGGGCTATACCCGGATTACGCAACGGCTGTCGATAACAT                                                      <  SRR4302532.4517767/94‑1 (MQ=60)
                                         GCCATTAACGGTTGTGCAAGCCTGGGGGCAGCGATTAATACAGCGGTAGGCCTGGGGCTATACCCGGATTACGCAACGGCTGTCGATAACATGG                                                    <  SRR4302532.3083346/94‑1 (MQ=60)
                                           CATTAACGGTTGTGCAAGCCTGGGGGCAGCGATTAATACAGCGGTAGGTCTGGGGCTATACCCGGATTACGCAACGGCTGTCGATAACATGGTT                                                  >  SRR4302532.5342472/1‑94 (MQ=60)
                                            ATTAACGGTTGTGCAAGCCTGGGGGCAGCGATTAATACAGCGGTAGGTCTGGGGCTATACCCGGATTACGCAACGGCTGTCGATAACATGGTTG                                                 >  SRR4302532.1072630/1‑94 (MQ=60)
                                             TTAACGGTTGTGCAAGCCTGGGGGCAGCGATTAATACAGCGGTAGGTCTGGGGCTATACCCGGATTACGCAACGGCTGTCGATAACATGGTTCG                                                >  SRR4302532.1093823/1‑94 (MQ=60)
                                             TTAACGGTTGTGCAAGCCTGGGGGCAGCGATTAATACAGCGGTAGGTCTGGGGCTATACCCGGATTACGCAACGGCTGTCGATAACATGGTTCG                                                <  SRR4302532.1607779/94‑1 (MQ=60)
                                              TAACGGTTGTGCAAGCCTGGGGGCAGCGATTAATACAGCGGTAGGCCTGGGGCTATACCCGGATTACGCAACGGCTGTCGATAACATGGTTCGC                                               <  SRR4302532.2097040/94‑1 (MQ=60)
                                              TAACGGTTGTGCAAGCCTGGGGGCAGCGATTAATACAGCGGTAGGCCTGGGGCTATACCCGGATTACGCAACGGCTGTCGATAACATGGTTCGC                                               >  SRR4302532.2780787/1‑94 (MQ=60)
                                                 CGGTTGTGCAAGCCTGGGGGCAGCGATTAATACAGCGGTAGGTCTGGGGCTATACCCGGATTACGCAACGGCTGTCGATAACATGGTTCGCGTG                                            >  SRR4302532.3114134/1‑94 (MQ=60)
                                                  GGTTGTGCAAGCCTGGGGGCAGCGATTAATACAGCGGTAGGTCTGGGGCTATACCCGGATTACGCAACGGCTGTCGATAACATGGTTCGCGTGA                                           >  SRR4302532.4334718/1‑94 (MQ=60)
                                                  GGTTGTGCAAGCCTGGGGGCAGCGATTAATACAGCGGTAGGCCTGGGGCTATACCCGGATTACGCAACGGCTGTCGATAACATGGTTCGCGTGA                                           >  SRR4302532.2259674/1‑94 (MQ=60)
                                                    TTGTGCAAGCCTGGGGGCAGCGATTAATACAGCGGTAGGTCTGGGGCTATACCCGGATTACGCAACGGCTGTCGATAACATGGTTCGCGTGAAA                                         <  SRR4302532.5652347/94‑1 (MQ=60)
                                                    TTGTGCAAGCCTGGGGGCAGCGATTAATACAGCGGTAGGTCTGGGGCTATACCCGGATTACGCAACGGCTGTCGATAACATGGTTCGCGTGAAA                                         >  SRR4302532.2444891/1‑94 (MQ=60)
                                                      GTGCAAGCCTGGGGGCAGCGATTAATACAGCGGTAGGTCTGGGGCTATACCCGGATTACGCAACGGCTGTCGATAACATGGTTCGCGTGAAAGA                                       <  SRR4302532.1926863/94‑1 (MQ=60)
                                                       TGCAAGCCTGGGGGCAGCGATTAATACAGCGGTAGGTCTGGGGCTATACCCGGATTACGCAACGGCTGTCGATAACATGGTTCGCGTGAAAGAT                                      <  SRR4302532.218528/94‑1 (MQ=60)
                                                        GCAAGCCTGGGGGCAGCGATTAATACAGCGGTAGGCCTGGGGCTATACCCGGATTACGCAACGGCTGTCGATAACATGGTTCGCGTGAAAGATA                                     <  SRR4302532.2082212/94‑1 (MQ=60)
                                                         CAAGCCTGGGGGCAGCGATTAATACAGCGGTAGGCCTGGGGCTATACCCGGATTACGCAACGGCTGTCGATAACATGGTTCGCGTGAAAGATAT                                    <  SRR4302532.2104918/94‑1 (MQ=60)
                                                         CAAGCCTGGGGGCAGCGATTAATACAGCGGTAGGCCTGGGGCTATACCCGGATTACGCAACGGCTGTCGATAACATGGTTCGCGTGAAAGATAT                                    >  SRR4302532.2333571/1‑94 (MQ=60)
                                                         CAAGCCTGGGGGCAGCGATTAATACAGCGGTAGGCCTGGGGCTATACCCGGATTACGCAACGGCTGTCGATAACATGGTTCGCGTGAAAGATAT                                    <  SRR4302532.4633984/94‑1 (MQ=60)
                                                          AAGCCTGGGGGCAGCGATTAATACAGCGGTAGGTCTGGGGCTATACCCGGATTACGCAACGGCTGTCGATAACATGGTTCGCGTGAAAGATATC                                   <  SRR4302532.4820560/94‑1 (MQ=60)
                                                          AAGCCTGGGGGCAGCGATTAATACAGCGGTAGGTCTGGGGCTATACCCGGATTACGCAACGGCTGTCGATAACATGGTTCGCGTGAAAGATATC                                   <  SRR4302532.2018563/94‑1 (MQ=60)
                                                            GCCTGGGGGCAGCGATTAATACAGCGGTAGGCCTGGGGCTATACCCGGATTACGCAACGGCTGTCGATAACATGGTTCGCGTGAAAGATATCTT                                 <  SRR4302532.2693658/94‑1 (MQ=60)
                                                             CCTGGGGGCAGCGATTAATACAGCGGTAGGTCTGGGGCTATACCCGGATTACGCAACGGCTGTCGATAACATGGTTCGCGTGAAAGATATCTTT                                <  SRR4302532.4851764/94‑1 (MQ=60)
                                                             CCTGGGGGCAGCGATTAATACAGCGGTAGGCCTGGGGCTATACCCGGATTACGCAACGGCTGTCGATAACATGGTTCGCGTGAAAGATATCTTT                                >  SRR4302532.3690297/1‑94 (MQ=60)
                                                             CCTGGGGGCAGCGATTAATACAGCGGTAGGCCTGGGGCTATACCCGGATTACGCAACGGCTGTCGATAACATGGTTCGCGTGAAAGATATCTTT                                <  SRR4302532.4775372/94‑1 (MQ=60)
                                                              CTGGGGGCAGCGATTAATACAGCGGTAGGTCTGGGGCTATACCCGGATTACGCAACGGCTGTCGATAACATGGTTCGCGTGAAAGATATCTTTA                               <  SRR4302532.3233233/94‑1 (MQ=60)
                                                              CTGGGGGCAGCGATTAATACAGCGGTAGGCCTGGGGCTATACCCGGATTACGCAACGGCTGTCGATAACATGGTTCGCGTGAAAGATATCTTTA                               <  SRR4302532.654832/94‑1 (MQ=60)
                                                              CTGGGGGCAGCGATTAATACAGCGGTAGGCCTGGGGCTATACCCGGATTACGCAACGGCTGTCGATAACATGGTTCGCGTGAAAGATATCTTTA                               >  SRR4302532.1052118/1‑94 (MQ=60)
                                                              CTGGGGGCAGCGATTAATACAGCGGTAGGCCTGGGGCTATACCCGGATTACGCAACGGCTGTCGATAACATGGTTCGCGTGAAAGATATCTTTA                               >  SRR4302532.2368489/1‑94 (MQ=60)
                                                              CTGGGGGCAGCGATTAATACAGCGGTAGGCCTGGGGCTATACCCGGATTACGCAACGGCTGTCGATAACATGGTTCGCGTGAAAGATATCTTTA                               <  SRR4302532.654831/94‑1 (MQ=60)
                                                               TGGGGGCAGCGATTAATACAGCGGTAGGTCTGGGGCTATACCCGGATTACGCAACGGCTGTCGATAACATGGTTCGCGTGAAAGATATCTTTAT                              <  SRR4302532.5995961/94‑1 (MQ=60)
                                                                   GGCAGCGATTAATACAGCGGTAGGTCTGGGGCTATACCCGGATTACGCAACGGCTGTCGATAACATGGTTCGCGTGAAAGATATCTTTATACCG                          <  SRR4302532.3115647/94‑1 (MQ=60)
                                                                   GGCAGCGATTAATACAGCGGTAGGTCTGGGGCTATACCCGGATTACGCAACGGCTGTCGATAACATGGTTCGCGTGAAAGATATCTTTATACCG                          <  SRR4302532.4350930/94‑1 (MQ=60)
                                                                   GGCAGCGATTAATACAGCGGTAGGCCTGGGGCTATCCCCGGATTACGCAACGGCTGTCGATAACATGGTTCGCGTGAAAGATATCTTTATACCG                          <  SRR4302532.220430/94‑1 (MQ=60)
                                                                   GGCAGCGATTAATACAGCGGTAGGCCTGGGGCTATACCCGGATTACGCAACGGCTGTCGATAACATGGTTCGCGTGAAAGATATCTTTATACCG                          >  SRR4302532.686218/1‑94 (MQ=60)
                                                                   GCCAGCGATTAATACAGCGGTAGCCCTGGCGCTATACCCGGATTACGCAACGGCTGTCGATAACATGGTTCGCGTGAAAGATATCTTTATACCG                          <  SRR4302532.3649612/94‑1 (MQ=60)
                                                                     CAGCGATTAATACAGCGGTAGGCCTGGGGCTATACCCGGATTACGCAACGGCTGTCGATAACATGGTTCGCGTGAAAGATATCTTTATACCGAT                        >  SRR4302532.4683624/1‑94 (MQ=60)
                                                                     CAGCGATTAATACAGCGGTAGGCCTGGGGCTATACCCGGATTACGCAACGGCTGTCGATAACATGGTTCGCGTGAAAGATATCTTTATACCGAT                        >  SRR4302532.537491/1‑94 (MQ=60)
                                                                      AGCGATTAATACAGCGGTAGGTCTGGGGCTATACCCGGATTACGCAACGGCTGTCGATAACATGGTTCGCGTGAAAGATATCTTTATACCGATT                       >  SRR4302532.4304717/1‑94 (MQ=60)
                                                                      AGCGATTAATACAGCGGTAGGCCTGGGGCTATACCCGGATTACGCAACGGCTGTCGATAACATGGTTCGCGTGAAAGATATCTTTATACCGATT                       >  SRR4302532.561463/1‑94 (MQ=60)
                                                                       GCGATTAATACAGCGGTAGGCCTGGGGCTATACCCGGATTACGCAACGGCTGTCGATAACATGGTTCGCGTGAAAGATATCTTTATACCGATTG                      <  SRR4302532.4550316/94‑1 (MQ=60)
                                                                         GATTAATACAGCGGTAGGTCTGGGGCTATACCCGGATTACGCAACGGCTGTCGATAACATGGTTCGCGTGAAAGATATCTTTATACCGATTGAG                    <  SRR4302532.3942971/94‑1 (MQ=60)
                                                                         GATTAATACAGCGGTAGGTCTGGGGCTATACCCGGATTACGCAACGGCTGTCGATAACATGGTTCGCGTGAAAGATATCTTTATACCGATTGAG                    <  SRR4302532.723912/94‑1 (MQ=60)
                                                                          ATTAATACAGCGGTAGGTCTGGGGCTATACCCGGATTACGCAACGGCTGTCGATAACATGGTTCGCGTGAAAGATATCTTTATACCGATTGAGA                   >  SRR4302532.5757276/1‑94 (MQ=60)
                                                                           TTAATACAGCGGTAGGTCTGGGGCTATACCCGGATTACGCAACGGCTGTCGATAACATGGTTCGCGTGAAAGATATCTTTATACCGATTGAGAG                  >  SRR4302532.1128327/1‑94 (MQ=60)
                                                                            TAATACAGCGGTAGGCCTGGGGCTATACCCGGATTACGCAACGGCTGTCGATAACATGGTTCGCGTGAAAGATATCTTTATACCGATTGAGAGC                 <  SRR4302532.4938271/94‑1 (MQ=60)
                                                                            TAATACAGCGGTAGGCCTGGGGCTATACCCGGATTACGCAACGACTGTCGATAACATGGTTCGCGTGAAAGATATCTTTATACCGATTGAGAGC                 <  SRR4302532.1695602/94‑1 (MQ=60)
                                                                             AATACAGCGGTAGGTCTGGGGCTATACCCGGATTACGCAACGGCTGTCGATAACATGGTTCGCGTGAAAGATATCTTTATACCGATTGAGAGCA                <  SRR4302532.3158305/94‑1 (MQ=60)
                                                                             AATACAGCGGTAGGTCTGGGGCTATACCCGGATTACGCAACGGCTGTCGATAACATGGTTCGCGTGAAAGATATCTTTATACCGATTGAGAGCA                <  SRR4302532.3158307/94‑1 (MQ=60)
                                                                                ACAGCGGTAGGTCTGGGGCTATACCCGGATTACGCAACGGCTGTCGATAACATGGTTCGCGTGAAAGATATCTTTATACCGATTGAGAGCAATG             <  SRR4302532.4867735/94‑1 (MQ=60)
                                                                                ACAGCGGTAGGCCTGGGGCTATACCCGGATTACGCAACGGCTGTCGATAACATGGTTCGCGTGAAAGATATCTTTATACCGATTGAGAGCAATG             >  SRR4302532.4383976/1‑94 (MQ=60)
                                                                                  AGCGGTAGGTCTGGGGCTATACCCGGATTACGCAACGGCTGTCGATAACATGGTTCGCGTGAAAGATATCTTTATACCGATTGAGAGCAATGCC           >  SRR4302532.845813/1‑94 (MQ=60)
                                                                                     GGTAGGTCTGGGGCTATACCCGGATTACGCAACGGCTGTCGATAACATGGTTCGCGTGAAAGATATCTTTATACCGATTGAGAGCAATGCCAAA        >  SRR4302532.5528853/1‑94 (MQ=60)
                                                                                     GGTAGGTCTGGGGCTATACCCGGATTACGACCCGGCTGTCGGTAACATGGTTCGCGTGAAAGATAGCTTTATACCGATTGAGAGCAACGCCAAC        >  SRR4302532.5528854/1‑94 (MQ=60)
                                                                                     GGTAGGCCTGGGGCTATACCCGGATTACGCAACGGCTGTCGATAACATGGTTCGCGTGAAAGATATCTTTATACCGATTGAGAGCAATGCCAAA        <  SRR4302532.4720834/94‑1 (MQ=60)
                                                                                      GTAGGCCTGGGGCTATACCCGGATTACGCAACGGCTGTCGATAACATGGTTCGCGTGAAAGATATCTTTATACCGATTGAGAGCAATGCCAAAC       <  SRR4302532.2839359/94‑1 (MQ=60)
                                                                                        AGGCCTGGGGCTATACCCGGATTACGCAACGGCTGTCGATAACATGGTTCGCGTGAAAGATATCTTTATACCGATTGAGAGCAATGCCAAACGC     >  SRR4302532.2998665/1‑94 (MQ=60)
                                                                                         GGCCTGGGGCTATACCCGGATTACGCAACGGCTGTCGATAACATGGTTCGCGTGAAAGATATCTTTATACCGATTGAGAGCAATGCCAAACGCT    <  SRR4302532.654820/94‑1 (MQ=60)
                                                                                          GCCTGGGGCTATACCCGGATTACGCAACGGCTGTCGATAACATGGTTCGCGTGAAAGATATCTTTATACCGATTGAGAGCAATGCCAAACGCTA   <  SRR4302532.4751317/94‑1 (MQ=60)
                                                                                           CCTGGGGCTATACCCGGATTACGCAACGGCTGTCGATAACATGGTTCGCGTGAAAGATATCTTTATACCGATTGAGAGCAATGCCAAACGCTAC  >  SRR4302532.5563110/1‑94 (MQ=60)
                                                                                           |                                                                                             
AGATTTTTGCCGACGTGTTCAACCTTCCGGCACGACGTAACGCCATTAACGGTTGTGCAAGCCTGGGGGCAGCGATTAATACAGCGGTAGGTCTGGGGCTATACCCGGATTACGCAACGGCTGTCGATAACATGGTTCGCGTGAAAGATATCTTTATACCGATTGAGAGCAATGCCAAACGCTAC  >  NC_000913/2901083‑2901267

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑