Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 521 238.2 12299412 96.0% 11807435 93.0

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output
AGATACGACCCGTGGTGAAGTTGTTGCGGCGGCTCATTTTGGTACGAATGAAACGCTCGTAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGTCTTCAGTAACGAACACTTCCCCGTGTTGGATTGGGCTCATAGTACCTGGATCGACGTTGATGTACGGATCCAGTTTCATGATGGTCACATTGA  >  NC_000913/2907403‑2907588
                                                                                            |                                                                                             
AGATACGACCCGTGGTGAAGTTGTTGCGGCGGCTCATTTTGGTACGAATGAAACGCTCGTAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGTC                                                                                              >  SRR4302532.5179516/1‑94 (MQ=60)
AGATACGACCCGTGGTGAAGTTGTTGCGGCGGCTCATTTTGGTACGAATGAAACGCTCGTAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGCC                                                                                              <  SRR4302532.4385128/94‑1 (MQ=60)
 GATACGACCCGTGGTGAAGTTGTTGCGGCGGCTCATTTTGGTACGAATGAAACGCTCGTAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGTCT                                                                                             <  SRR4302532.5315685/94‑1 (MQ=60)
  ATACGACCCGTGGTGAAGTTGTTGCGGCGGCTCATTTTGGTACGAATGAAACGCTCGTAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGTCTT                                                                                            <  SRR4302532.3866575/94‑1 (MQ=60)
  ATACGACCCGTGGTGAAGTTGTTGCGGCGGCTCATTTTGGTACGAATGAAACGCTCGTAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGTCTT                                                                                            <  SRR4302532.1899924/94‑1 (MQ=60)
   gacggagcgttgtgaagtggttgcgccgtgtgATTTTGGTACGAATGAAACGCTCGTAGTGCCCAAGGTCCAGGTCGGTTTCAGCGCTGTCTTC                                                                                           <  SRR4302532.1267240/62‑1 (MQ=60)
     CGACCCGTGGTGAAGTTGTTGCGGCGGCTCATTTTGGTACGAATGAAACGCTCGTAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGTCTTCAG                                                                                         >  SRR4302532.3781172/1‑94 (MQ=60)
      GACCCGTGGTGAAGTTGTTGCGGCGGCTCATTTTGGTACGAATGAAACGCTCGTAGTGCCCCAGGTCCAGGTCGGTTTCAGCTCCGTCTTCAGT                                                                                        <  SRR4302532.4876421/94‑1 (MQ=60)
       ACCCGTGGTGAAGTTGTTGCGGCGGCTCATTTTGGTACGAATGAAACGCTCGTAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGTCTTCAGTA                                                                                       >  SRR4302532.1169643/1‑94 (MQ=60)
       ACCCGTGGTGAAGTTGTTGCGGCGGCTCATTTTGGTACGAATGAAACGCTCGTAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGCCTTCAGTA                                                                                       >  SRR4302532.191449/1‑94 (MQ=60)
       ACCCGTGGTGAAGTTGTTGCGGCGGCTCATTTTGGTACGAATGAAACGCTCGTAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGCCTTCAGTA                                                                                       >  SRR4302532.2177524/1‑94 (MQ=60)
       ACCCGTGGTGAAGTTGTTGCGGCGGCTCATTTTGGTACGAATGAAACGCTCGTAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGCCTTCAGTA                                                                                       <  SRR4302532.4840297/94‑1 (MQ=60)
        CCCGTGGTGAAGTTGTTGCGGCGGCTCATTTTGGGACGAATGAAACGCTCGTAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGCCTTCAGTAA                                                                                      >  SRR4302532.4544843/1‑94 (MQ=60)
         CCGTGGTGAAGTTGTTGCGGCGGCTCATTTTGGTACGAATGAAACGCTCGTAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGTCTTCAGTAAC                                                                                     <  SRR4302532.6355647/94‑1 (MQ=60)
         CCGTGGTGAAGTTGTTGCGGCGGCTCATTTTGGTACGAATGAAACGCTCGTAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGCCTTCAGTAAC                                                                                     <  SRR4302532.4808186/94‑1 (MQ=60)
          CGTGGTGAAGTTGTTGCGGCGGCTCATTTTGGTACGAATGAAACGCTCGTAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGCCTTCAGTAACG                                                                                    >  SRR4302532.5919299/1‑94 (MQ=60)
          CGTGGTGAAGTTGTTGCGGCGGCTCATTTTGGTACGAATGAAACGCTCGTAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGCCTTCAGTAACG                                                                                    <  SRR4302532.1102719/94‑1 (MQ=60)
             GGTGAAGTTGTTGCGGCGGCTCATTTTGGTACGAATGAAACGCTCGTAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGCCTTCAGTAACGAAC                                                                                 >  SRR4302532.5235554/1‑94 (MQ=60)
             GGTGAAGTTGTTGCGGCGGCTCATTTTGGTACGAATGAAACGCTCGTAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGCCTTCAGTAACGAAC                                                                                 >  SRR4302532.2069782/1‑94 (MQ=60)
              GTGAAGTTGTTGCGGCGGCTCATTTTGGTACGAATGAAACGCTCGTAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGCCTTCAGTAACGAACA                                                                                <  SRR4302532.1955875/94‑1 (MQ=60)
              GTGAAGTTGTTGCGGCGGCTCATTTTGGTACGAATGAAACGCTCGTAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGCCTTCAGTAACGAACA                                                                                >  SRR4302532.648458/1‑94 (MQ=60)
                TAAGTTGTTGCGGCGGCTCATTTTGGTACGAATGAAACGCTCGTAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGTCTTCAGTAACGAACACT                                                                              <  SRR4302532.6006378/94‑1 (MQ=60)
                GAAGTTGTTGCGGCGGCTCATTTTGGTACGAATGAAACGCTCGTAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGCCTTCAGTAACGAACACT                                                                              >  SRR4302532.4687863/1‑94 (MQ=60)
                GAAGTTGTTGCGGCGGCTCATTTTGGTACGAATGAAACGCTCGTAGTGCCCCAGGTCCAGGTCGGCTTCAGCGCCGTCTTCAGTAACGAACACT                                                                              >  SRR4302532.5165647/1‑94 (MQ=60)
                 AAGTTGTTGCGGCGGCGCATTTTGGTACGAATGGAACGCTCGTAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGCCTTCCGTCACGAACACGT                                                                             >  SRR4302532.2731735/1‑94 (MQ=60)
                    TTGTTGCGGCGGCTCATTTTGGTACGAATGAAACGCTCGTAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGCCTTCAGTAACGAACACTTCCC                                                                          <  SRR4302532.1734744/94‑1 (MQ=60)
                      GTTGCGGCGGCTCATTTTGGTACGAATGAAACGCTCGTAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGCCTTCAGTAACGAACACTTCCCCG                                                                        <  SRR4302532.2076055/94‑1 (MQ=60)
                        TGCGGCGGCTCATTTTGGTACGAATGAAACGCTCGTAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGTCTTCAGTAACGAACACTTCCCCGTG                                                                      >  SRR4302532.2104521/1‑94 (MQ=60)
                         GCGGCGGCTCATTTTGGTACGAATGAAACGCTCGTAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGTCTTCAGTAACGAACACTTCCCCGTGT                                                                     <  SRR4302532.383777/94‑1 (MQ=60)
                          CGGCGGCTCATTTTGGTACGAATGAAACGCTCGTAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGTCTTCAGTAACGAACACTTCCCCGTGTT                                                                    <  SRR4302532.955512/94‑1 (MQ=60)
                          CGGCGGCTCATTTTGGTACGAATGAAACGCTCGTAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGCCTTCAGTAACGAACACTTCCCCGTGTT                                                                    <  SRR4302532.768664/94‑1 (MQ=60)
                          CGGCGGCTCATTTTGGTACGAATGAAACGCTCGTAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGCCTTCAGTAACGAACACTTCCCCGTGTT                                                                    >  SRR4302532.5352243/1‑94 (MQ=60)
                           GGCGGCTCATTTTGGTACGAATGAAACGCTCGTAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGTCTTCAGTAACGAACACTTCCCCGTGTTG                                                                   <  SRR4302532.6119731/94‑1 (MQ=60)
                           GGCGGCTCATTTTGGTACGAATGAAACGCTCGTAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGTCTTCAGTAACGAACACTTCCCCGTGTTG                                                                   >  SRR4302532.2765840/1‑94 (MQ=60)
                           GGCGGCTCATTTTGGTACGAATGAAACGCTCGTAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGCCTTCAGTAACGAACACTTCCCCGTGTTG                                                                   <  SRR4302532.4255514/94‑1 (MQ=60)
                           GGCGGCTCATTTTGGTACGAATGAAACGCTCGTAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGCCTTCAGTAACGAACACTTCCCCGTGTTG                                                                   >  SRR4302532.3837455/1‑94 (MQ=60)
                            GCGGCTCATTTTGGTACGAATGAAACGCTCGTAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGCCTTCAGTAACGAACACTTCCCCGTGTTGG                                                                  <  SRR4302532.5292383/94‑1 (MQ=60)
                             CGGCTCATTTTGGTACGAATGAAACGCTCGTAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGTCTTCAGTAACGAACACTTCCCCGTGTTGGA                                                                 >  SRR4302532.3979432/1‑94 (MQ=60)
                              GGCTCATTTTGGTACGAATGAAACGCTCGTAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGCCTTCAGTAACGAACACTTCCCCGTGTTGGAT                                                                <  SRR4302532.2684496/94‑1 (MQ=60)
                              GGCTCATTTTGGTACGAATGAAACGCTCGTAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGCCTTCAGTAACGAACACTTCCCCGTGTTGGAT                                                                <  SRR4302532.3561662/94‑1 (MQ=60)
                              GACTCATTTTGGTACGAATGAAGCGCTCGTAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGCCTTCAGTAACGAACACTTCCCCGTGTTGGAT                                                                <  SRR4302532.5634017/94‑1 (MQ=60)
                               GCTCATGTTGGGACGAATGAAACGCTCGTAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGCCTTCAGTAACGAACACTTCCCCGTGTTGGATT                                                               <  SRR4302532.2168398/94‑1 (MQ=60)
                                 TCATTTTGGTACGAATGAAACGCTCGTAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGCCTTCAGTAACGAACACTTCCCCGTGTTGGATTGG                                                             <  SRR4302532.2109066/94‑1 (MQ=60)
                                  CATTTTGGTACGAATGAAACGCTCGTAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGCCTTCAGTAACGAACACTTCCCCGTGTTGGATTGGG                                                            <  SRR4302532.4515131/94‑1 (MQ=60)
                                   ATTTTGGTACGAATGAAACGCTCGTAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGCCTTCAGTAACGAACACTTCCCCGTGTTGGATTGGGC                                                           >  SRR4302532.4687696/1‑94 (MQ=60)
                                   ATTTTGGTACGAATGAAACGCTCGTAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGCCTTCAGTAACGAACACTTCCCCGTGTTGGATTGGGC                                                           <  SRR4302532.1712475/94‑1 (MQ=60)
                                   ATTTTGGTACGAATGAAACGCTCGTAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCG‑CCTCAGTAACGGAAACTTTCCCGTGTTGGATTtgggt                                                          >  SRR4302532.4687849/1‑89 (MQ=60)
                                    TTTTGGTACGAATGAAACGCTCGTAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGCCTTCAGTAACGAACACTTCCCCGTGTTGGATTGGGCT                                                          <  SRR4302532.676580/94‑1 (MQ=60)
                                    TTTTGGTACGAATGAAACGCTCGTAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGCCTTCAGTAACGAACACTTCCCCGTGTTGGATTGGGCT                                                          <  SRR4302532.3283056/94‑1 (MQ=60)
                                       TGGTACGAATGAAACGCTCGTAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGTCTTCAGTAACGAACACTTCCCCGTGTTGGATTGGGCTCAT                                                       <  SRR4302532.3698632/94‑1 (MQ=60)
                                       TGGTACGAATGAAACGCTCGTAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGTCTTCAGTAACGAACACTTCCCCGTGTTGGATTGGGCTCAT                                                       <  SRR4302532.1540024/94‑1 (MQ=60)
                                       TGGTACGAATGAAACGCTCGTAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGCCTTCAGTAACGAACACTTCCCCGTGTTGGATTGGGCTCAT                                                       <  SRR4302532.1308453/94‑1 (MQ=60)
                                       TGGTACGAATGAAACGCTCGTAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGCCTTCAGTAACGAACACTTCCCCGTGTTGGATTGGGCTCAT                                                       <  SRR4302532.5067898/94‑1 (MQ=60)
                                        GGTACGAATGAAACGCTCGTAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGCCTTCAGTAACGAACACTTCCCCGTGTTGGATTGGGCTCATA                                                      <  SRR4302532.2556954/94‑1 (MQ=60)
                                        GGTACGAATGAAACGCTCGTAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGCCTTCAGTAACGAACACTTCCCCGTGTTGGATTGGGCTCATA                                                      <  SRR4302532.5201136/94‑1 (MQ=60)
                                         GTACGAATGAAACGCTCGTAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGCCTTCAGTAACGAACACTTCCCCGTGTTGGATTGGGCTCATAG                                                     <  SRR4302532.376144/94‑1 (MQ=60)
                                          TACGAATGAAACGCTCGTAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGCCTTCAGTAACGAACACTTCCCCGTGTTGGATTGGGCTCATAGT                                                    <  SRR4302532.1683131/94‑1 (MQ=60)
                                           ACGAATGAAACGCTCGTAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGCCTTCAGTAACGAACACTTCCCCGTGTTGGATTGGGCTCATAGTA                                                   <  SRR4302532.470947/94‑1 (MQ=60)
                                              AATGAAACGCTCGTAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGTCTTCAGTAACGAACACTTCCCCGTGTTGGATTGGGCTCATAGTACCT                                                <  SRR4302532.4085597/94‑1 (MQ=60)
                                              AATGAAACGCTCGTAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGTCTTCAGTAACGAACACTTCCCCGTGTTGGATTGGGCTCATAGTACCT                                                <  SRR4302532.2184557/94‑1 (MQ=60)
                                              AATGAAACGCTCGTAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGCCTTCAGTAACGAACACTTCCCCGTGTTGGATTGGGCTCATAGTACCT                                                <  SRR4302532.1769907/94‑1 (MQ=60)
                                              AATGAAACGCTCGTAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGCCTTCAGTAACGAACACTTCCCCGTGTTGGATTGGGCTCATAGTACCT                                                <  SRR4302532.2971771/94‑1 (MQ=60)
                                              AATGAAACGCTCGTAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGCCTTCAGTAACGAACACTTCCCCGTGTTGGATTGGGCTCATAGTACCT                                                <  SRR4302532.1652209/94‑1 (MQ=60)
                                                TGAAACGCTCGTAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGTCTTCAGTAACGAACACTTCCCCGTGTTGGATTGGGCTCATAGTACCTGG                                              >  SRR4302532.5942681/1‑94 (MQ=60)
                                                TGAAACGCTCGTAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGCCTTCAGTAACGAACACTTCCCCGTGTTGGATTGGGCTCATAGTACCTGG                                              <  SRR4302532.1418106/94‑1 (MQ=60)
                                                 GAAACGCTCGTAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGCCTTCAGTAACGAACACTTCCCCGTGTTGGATTGGGCTCATAGTACCTGGA                                             <  SRR4302532.272283/94‑1 (MQ=60)
                                                  AAACGCTCGTAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGTCTTCAGTAACGAACACTTCCCCGTGTTGGATTGGGCTCATAGTACCTGGAT                                            <  SRR4302532.1832328/94‑1 (MQ=60)
                                                  AAACGCTCGTAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGTCTTCAGTAACGAACACTTCCCCGTGTTGGATTGGGCTCATAGTACCTGGAT                                            >  SRR4302532.4209684/1‑94 (MQ=60)
                                                   AACGCTCGTAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGTCTTCAGTAACGAACACTTCCCCGTGTTGGATTGGGCTCATAGTACCTGGATC                                           <  SRR4302532.3932432/94‑1 (MQ=60)
                                                      GCTCGTAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGTCTTCAGTAACGAACACTTCCCCGTGTTGGATTGGGCTCATAGTACCTGGATCGAC                                        >  SRR4302532.6204481/1‑94 (MQ=60)
                                                      GCTCGTAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGCCTTCAGTAACGAACACTTCCCCGTGTTGGATTGGGCTCATAGTACCTGGATCGAC                                        >  SRR4302532.2053310/1‑94 (MQ=60)
                                                      GCTCGTAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGCCTTCAGTAACGAACACTTCCCCGTGTTGGATTGGGCTCATAGTACCTGGATCGAC                                        <  SRR4302532.3498698/94‑1 (MQ=60)
                                                        CCGTAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGTCTTCAGTAACGAACACTTCCCCGTGTTGGATTGGGCTCATAGTACCTGGATCGACGT                                      <  SRR4302532.4735994/94‑1 (MQ=60)
                                                         CGTCGTGCCCCAGGTCCAGGTCGGTTTCAGCGTCGTCTTCAGTAACGAACACTTCCCCGTGTTGGATTGGGCTCATAGTACCTTGATCGTCGTT                                     <  SRR4302532.852226/94‑1 (MQ=60)
                                                         CGTAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGTCTTCAGTAACGAACACTTCCCCGTGTTGGATTGGGCTCATAGTACCTGGATCGACGTT                                     <  SRR4302532.5892768/94‑1 (MQ=60)
                                                         CGTAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGCCTTCAGTAACGAACACTTCCCCGTGTTGGATTGGGCTCATAGTACCTGGATCGACGTT                                     <  SRR4302532.1448484/94‑1 (MQ=60)
                                                         CGTAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGCCTTCAGTAACGAACACTTCCCCGTGTTGGATTGGGCTCATAGTACCTGGATCGACGTT                                     <  SRR4302532.4635192/94‑1 (MQ=60)
                                                          GTAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGTCTTCAGTAACGAACACTTCCCCGTGTTGGATTGGGCTCATAGTACCTGGATCGACGTTG                                    >  SRR4302532.283701/1‑94 (MQ=60)
                                                          GTAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGCCTTCAGTAACGAACACTTCCCCGTGTTGGATTGGGCTCATAGTACCTGGATCGACGTTG                                    >  SRR4302532.2466634/1‑94 (MQ=60)
                                                          GTAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGCCTTCAGTAACGAACACTTCCCCGTGTTGGATTGGGCTCATAGTACCTGGATCGACGTTG                                    >  SRR4302532.3968528/1‑94 (MQ=60)
                                                           CAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGCCTTCAGTAACGAACACTTCCCCGTGTTGGATTGGGCTCATAGTACCTGGATCGACGTTGA                                   <  SRR4302532.2491464/94‑1 (MQ=60)
                                                            AGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGCCTTCAGTAACGAACACTTCCCCGTGTTGGATTGGGCTCATAGTACCTGGATCGACGTTGAT                                  <  SRR4302532.2525771/94‑1 (MQ=60)
                                                             GTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGTCTTCAGTAACGAACACTTCCCCGTGTTGGATTGGGCTCATAGTACCTGGATCGACGTTGATG                                 <  SRR4302532.1826838/94‑1 (MQ=60)
                                                              TGCCCCAGGTCCAGGTCGGTTTCAGCGCCGTCTTCAGTAACGAACACTTCCCCGTGTTGGATTGGGCTCATAGTACCTGGATCGACGTTGATGT                                <  SRR4302532.998096/94‑1 (MQ=60)
                                                              TGCCCCAGGTCCAGGTCGGTTTCAGCGCCGTCTTCAGTAACGAACACTTCCCCGTGTTGGATTGGGCTCATAGTACCTGGATCGACGTTGATGT                                <  SRR4302532.3319827/94‑1 (MQ=60)
                                                                CCCCAGGTCCAGGTCGGTTTCAGCGCCGTCTTCAGTAACGAACACTTCCCCGTGTTGGATTGGGCTCATAGTACCTGGATCGACGTTGATGTAC                              <  SRR4302532.2154971/94‑1 (MQ=60)
                                                                 CCCAGGTCCAGGTCGGTTTCAGCTCCGTCTTCAGTAACGAACACTTCCCCGTGTTGGATTGGGCTCATAGTACCTGGATCGACGTTGATGTACG                             <  SRR4302532.3618571/94‑1 (MQ=60)
                                                                 CCCAGGTCCAGGTCGGTTTCAGCGCCGCCTTCAGTAACGAACACTTCCCCGTGTTGGATTGGGCTCATAGTACCTGGATCGACGTTGATGTACG                             >  SRR4302532.2588690/1‑94 (MQ=60)
                                                                   CAGGTCCAGGTCGGTTTCAGCGCCGTCTTCAGTAACGAACACTTCCCCGTGTTGGATTGGGCTCATAGTACCTGGATCGACGTTGATGTACGGA                           <  SRR4302532.2719193/94‑1 (MQ=60)
                                                                   CAGGTCCAGGTCGGTTTCAGCGCCGCCTTCAGTAACGAACACTTCCCCGTGTTGGATTGGGCTCATAGTACCTGGATCGACGTTGATGTACGGA                           >  SRR4302532.4216238/1‑94 (MQ=60)
                                                                         CAGGTCGGTTTCAGCGCCGCCTTCAGTAACGAACACTTCCCCGTGTTGGATTGGGCTCATAGTACCTGGATCGACGTTGATGTACGGATCCAGT                     <  SRR4302532.3152935/94‑1 (MQ=60)
                                                                          AGGTCGGTTTCAGCGCCGCCTTCAGTAACGAACACTTCCCCGTGTTGGATTGGGCTCATAGTACCTGGATCGACGTTGATGTACGGATCCAGTT                    >  SRR4302532.929195/1‑94 (MQ=60)
                                                                           GGTCGGTTTCAGCGCCGTCTTCAGTAACGAACACTTCCCCGTGTTGGATTGGGCTCATAGTACCTGGATCGACGTTGATGTACGGATCCAGTTT                   >  SRR4302532.2587319/1‑94 (MQ=60)
                                                                           GGTCGGTTTCAGCGCCGCCTTCAGTAACGAACACTTCCCCGTGTTGGATTGGGCTCATAGTACCTGGATCGCCGCTGATGTACGCGTCCAGTTT                   >  SRR4302532.5155697/1‑94 (MQ=60)
                                                                           GGTCGGTTTCAGCGCCGCCTTCAGTAACGAACACTTCCCCGTGTTGGATTGGGCTCATAGTACCTGGATCGACGTTGATGTACGGATCCAGTTT                   <  SRR4302532.5871855/94‑1 (MQ=60)
                                                                            GTCGGTTTCAGCGCCGCCTTCAGTAACGAACACTTCCCCGTGTTGGATTGGGCTCATAGTACCTGGATCGACGTTGATGTACGGATCCAGTTTC                  >  SRR4302532.3680573/1‑94 (MQ=60)
                                                                              CGGTTTCAGCGCCGTCTTCAGTAACGAACACTTCCCCGTGTTGGATTGGGCTCATAGTACCTGGATCGACGTTGATGTACGGATCCAGTTTCAT                <  SRR4302532.4190475/94‑1 (MQ=60)
                                                                              CGGTTTCAGCGCCGCCTTCAGTAACGAACACTTCCCCGTGTTGGATTGGGCTCATAGTACCTGGATCGACGTTGATGTACGGATCCAGTTTCAT                <  SRR4302532.1571112/94‑1 (MQ=60)
                                                                              CGGTTTCAGCGCCGCCTTCAGTAACGAACACTTCCCCGTGTTGGATTGGGCTCATAGTACCTGGATCGACGTTGATGTACGGATCCAGTTTCAT                <  SRR4302532.4578453/94‑1 (MQ=60)
                                                                              CGGTTTCAGCGCCGCCTTCAGTAACGAACACTTCCCCGTGTTGGATTGGGCTCATAGTACCTGGATCGACGTTGATGTACGGATCCAGTTTCAT                <  SRR4302532.5790141/94‑1 (MQ=60)
                                                                              CGGTTTCAGCGCCGCCTTCAGTAACGAACACTTCCCCGTGTTGGATTGGGCTCATAGTACCTGGATCGACGTTGATGTACGGATCCAGTTTCAT                >  SRR4302532.2151065/1‑94 (MQ=60)
                                                                               GGTTTCAGCGCCGTCTTCAGTAACGAACACTTCCCCGTGTTGGATTGGGGTCATAGTATCTGGATCGACGATGATGTAAGGATGCAGCTTCATG               >  SRR4302532.3703216/1‑94 (MQ=60)
                                                                               GGTTTCAGCGCCGTCTTCAGTAACGAACACTTCCCCGTGTTGGATTGGGCTCATAGTACCTGGATCGACGTTGATGTACGGATCCAGTTTCATG               <  SRR4302532.6339926/94‑1 (MQ=60)
                                                                                 TTTCAGCGCCGTCTTCAGTAACGAACACTTCCCCGTGTTGGATTGGGCTCATAGTACCTGGATCGACGTTGATGTACGGATCCAGTTTCATGAT             <  SRR4302532.5693752/94‑1 (MQ=60)
                                                                                 TTTCAGCGCCGCCTTCAGTAACGAACACTTCCCCGTGTTGGATTGGGCTCATAGTACCTGGATCGACGTTGATGTACGGATCCAGTTTCATGAT             <  SRR4302532.4637662/94‑1 (MQ=60)
                                                                                  TTCAGCGCCGCCTTCAGTAACGAACACTTCCCCGTGTTGGATTGGGCTCATAGTACCTGGATCGACGTTGATGTACGGATCCAGTTTCATGATG            >  SRR4302532.4263191/1‑94 (MQ=60)
                                                                                  TTCAGCGCCGCCTTCAGTAACGAACACTTCCCCGTGTTGGATTGGGCTCATAGTACCTGGATCGACGTTGATGTACGGATCCAGTTTCATGATG            <  SRR4302532.3156431/94‑1 (MQ=60)
                                                                                    CAGCGCCGCCTTCAGTAACGAACACTTCCCCGTGTTGGATTGGGCTCATAGTACCTGGATCGACGTTGATGTACGGATCCAGTTTCATGATGGT          >  SRR4302532.6351352/1‑94 (MQ=60)
                                                                                     AGCGCCGTCTTCAGTAACGAATGCTTCCCCGTGTTGGATTGGGCTCATAGTACCTGGATCGACGTTGATGTACGGATCCAGTTTCATGATGGTC         >  SRR4302532.6262749/1‑94 (MQ=60)
                                                                                     AGCGCCGCCTTCAGTAACGAACACTTCCCCGTGTTGGATTGGGCTCATAGTACCTGGATCGACGTTGATGTACGGATCCAGTTTCATGATGGTC         <  SRR4302532.2438327/94‑1 (MQ=60)
                                                                                      GCGCCGCCTTCAGTAACGAACACTTCCCCGTGTTGGATTGGGCTCATAGTACCTGGATCGACGTTGATGTACGGATCCAGTTTCATGATGGTCA        <  SRR4302532.2764013/94‑1 (MQ=60)
                                                                                         CCGTCTTCAGTAACGAACACTTCCCCGTGTTGGATTGGGCTCATAGTACCTGGATCGACGTTGATGTACGGATCCAGTTTCATGATGGTCACAT     >  SRR4302532.3952699/1‑94 (MQ=60)
                                                                                          CGTCTTCAGTAACGAACACTTCCCCGTGTTGGATTGGGCTCATAGTACCTGGATCGACGTTGATGTACGGATCCAGTTTCATGATGGTCACATT    <  SRR4302532.3128235/94‑1 (MQ=60)
                                                                                          CGTCTTCAGTAACGAACACTTCCCCGTGTTGGATTGGGCTCATAGTACCTGGATCGACGTTGATGTACGGATCCAGTTTCATGATGGTCACATT    <  SRR4302532.2455084/94‑1 (MQ=60)
                                                                                          CGCCTTCAGTAACGAACACTTCCCCGTGTTGGATTGGGCTCATAGTACCTGGATCGACGTTGTTGTACGGATCCAGTTTCATGATGGTCACATT    <  SRR4302532.1492800/94‑1 (MQ=60)
                                                                                          CGCCTTCAGTAACGAACACTTCCCCGTGTTGGATTGGGCTCATAGTACCTGGATCGACGTTGATGTACGGATCCAGTTTCATGATGGTCACATT    >  SRR4302532.20018/1‑94 (MQ=60)
                                                                                          CGCCTTCAGTAACGAACACTTCCCCGTGTTGGATTGGGCTCATAGTACCTGGATCGACGTTGATGTACGGATCCAGTTTCATGATGGTCACATT    <  SRR4302532.944454/94‑1 (MQ=60)
                                                                                          CGCCTTAAGTAACGAACACTTCCCCGTGTTGGATTGGGCTCATTGTACCTGGATCGACGTTGATGTACGGATCCAGTTTCATGAAGGTCCCATT    <  SRR4302532.5686645/94‑1 (MQ=60)
                                                                                           GTCTTCAGTAACGAACACTTCCCCGTGTTGGATTGGGCTCATAGTACCTGGATCGACGTTGATGTACGGATCCAGTTTCATGATGGTCACATTG   <  SRR4302532.3874836/94‑1 (MQ=60)
                                                                                           GTCTTCAGTAACGAACACTTCACCGTGTTGGATTGGGCTCATAGTACCTGGATCGACGTTGATGTACGGATCCAGTTTCATGACGGTCACATTG   >  SRR4302532.1238079/1‑94 (MQ=60)
                                                                                           GCCTTCAGTAACGAACACTTCCCCGTGTTGGATTGGGCTCATAGTACCTGGATCGACGTTGATGTACGGATCCAGTTTCATGATGGTCACATTG   >  SRR4302532.5048909/1‑94 (MQ=60)
                                                                                            CCTTCAGTAACGAACACTTCCCCGTGTTGGATTGGGCTCATAGTACCTGGATCGACGTTGATGTACGGATCCAGTTTCATGATGGTCACATTGA  >  SRR4302532.2355569/1‑94 (MQ=60)
                                                                                            |                                                                                             
AGATACGACCCGTGGTGAAGTTGTTGCGGCGGCTCATTTTGGTACGAATGAAACGCTCGTAGTGCCCCAGGTCCAGGTCGGTTTCAGCGCCGTCTTCAGTAACGAACACTTCCCCGTGTTGGATTGGGCTCATAGTACCTGGATCGACGTTGATGTACGGATCCAGTTTCATGATGGTCACATTGA  >  NC_000913/2907403‑2907588

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑