Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 521 238.2 12299412 96.0% 11807435 93.0

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output
ATCAGGTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGC‑‑CAAG‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACTGACTAACCGCCACGGTAA  >  NC_000913/3222864‑3223041
                                                                                        |                                                                                             
ATCAGGTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGC                                                                                      >  SRR4302532.4557715/1‑94 (MQ=60)
ATCAGGTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGC                                                                                      >  SRR4302532.5519167/1‑94 (MQ=60)
ATCAGGTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGC                                                                                      >  SRR4302532.5577145/1‑94 (MQ=60)
 TCAGGTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCC                                                                                     >  SRR4302532.39629/1‑94 (MQ=60)
  CAGGTGTCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCA                                                                                    <  SRR4302532.1074731/94‑1 (MQ=60)
  CAGGTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCA                                                                                    >  SRR4302532.5145163/1‑94 (MQ=60)
   AGGTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGTCGCAGCA‑‑‑‑CCGTCGATGCCAT                                                                                   <  SRR4302532.4813828/94‑1 (MQ=60)
   AGGTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCAT                                                                                   >  SRR4302532.319011/1‑94 (MQ=60)
   AGGTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCAT                                                                                   >  SRR4302532.2635912/1‑94 (MQ=60)
    GGTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATG                                                                                  >  SRR4302532.3001694/1‑94 (MQ=60)
    GGTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATG                                                                                  <  SRR4302532.4863421/94‑1 (MQ=60)
    GGTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATG                                                                                  >  SRR4302532.5297100/1‑94 (MQ=60)
     GTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGT                                                                                 <  SRR4302532.6255976/94‑1 (MQ=60)
     GTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGT                                                                                 <  SRR4302532.5637910/94‑1 (MQ=60)
      TGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTT                                                                                <  SRR4302532.2980786/94‑1 (MQ=60)
       GGCGTATTGCGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTC                                                                               <  SRR4302532.476554/94‑1 (MQ=60)
       GGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTC                                                                               <  SRR4302532.2151247/94‑1 (MQ=60)
       GGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTC                                                                               >  SRR4302532.6000510/1‑94 (MQ=60)
       GGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTC                                                                               <  SRR4302532.3355837/94‑1 (MQ=60)
       GGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTC                                                                               >  SRR4302532.4118597/1‑94 (MQ=60)
       GGCGTATTACGGTCGTGGACCGGGCGAAAACCAAGCCGACAGCCCGCAAGCTAACATCATCTATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTC                                                                               >  SRR4302532.1684594/1‑94 (MQ=57)
         CGTATTACGGTCGTGGACCGGGCGAAACCTACACCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGA                                                                             <  SRR4302532.2577644/94‑1 (MQ=60)
          GTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAG                                                                            >  SRR4302532.49662/1‑94 (MQ=60)
          GTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAG                                                                            <  SRR4302532.3175027/94‑1 (MQ=60)
           TATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGA                                                                           >  SRR4302532.5633242/1‑94 (MQ=60)
           TATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGA                                                                           >  SRR4302532.683191/1‑94 (MQ=60)
           TATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGA                                                                           >  SRR4302532.4166788/1‑94 (MQ=60)
            ATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAA                                                                          >  SRR4302532.2155053/1‑94 (MQ=60)
            ATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAA                                                                          >  SRR4302532.3666979/1‑94 (MQ=60)
             TTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAAC                                                                         >  SRR4302532.3092144/1‑94 (MQ=60)
              TACGGTCGTGGACCGGGCGAAACCTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACT                                                                        <  SRR4302532.4742787/94‑1 (MQ=60)
              TACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACT                                                                        <  SRR4302532.4050434/94‑1 (MQ=60)
                CGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTAT                                                                      <  SRR4302532.1158135/94‑1 (MQ=60)
                 GGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATC                                                                     >  SRR4302532.3068867/1‑94 (MQ=60)
                 GGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATC                                                                     >  SRR4302532.5342660/1‑94 (MQ=60)
                 GGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATC                                                                     <  SRR4302532.6195184/94‑1 (MQ=60)
                  GTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCC                                                                    >  SRR4302532.3112074/1‑94 (MQ=60)
                   tcggtgacaGGGCGACAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGCCGATGCCATGTTCGAGAACTATCCC                                                                   <  SRR4302532.31822/85‑1 (MQ=60)
                   TCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCC                                                                   <  SRR4302532.6026715/94‑1 (MQ=60)
                   TCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCC                                                                   >  SRR4302532.555657/1‑94 (MQ=60)
                    CGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCT                                                                  <  SRR4302532.6294885/94‑1 (MQ=60)
                     GTGGACCGGGCGAAAACTACGCCTACAGGCAGCAGGCTAACATCATCCATTTCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTT                                                                 <  SRR4302532.4421208/94‑1 (MQ=60)
                     GTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTT                                                                 <  SRR4302532.963129/94‑1 (MQ=60)
                     GTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTT                                                                 <  SRR4302532.1378730/94‑1 (MQ=60)
                     GTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTT                                                                 >  SRR4302532.6225149/1‑94 (MQ=60)
                     GTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTT                                                                 <  SRR4302532.4852332/94‑1 (MQ=60)
                      TGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTC                                                                >  SRR4302532.5434428/1‑94 (MQ=60)
                      TGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTC                                                                <  SRR4302532.6128486/94‑1 (MQ=60)
                       GGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCC                                                               <  SRR4302532.4734130/94‑1 (MQ=60)
                       GGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCC                                                               <  SRR4302532.113962/94‑1 (MQ=60)
                       GGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCC                                                               <  SRR4302532.887454/94‑1 (MQ=60)
                       GGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCC                                                               <  SRR4302532.113961/94‑1 (MQ=60)
                        GACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCC                                                              >  SRR4302532.4282368/1‑94 (MQ=60)
                        GACCGGGCGAAAACAACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCC                                                              <  SRR4302532.2799963/94‑1 (MQ=60)
                          CCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGC                                                            >  SRR4302532.2064762/1‑94 (MQ=60)
                          CCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGCCGATGCCATGTTCGTGAACTATACCTTCCCGC                                                            >  SRR4302532.3489584/1‑94 (MQ=60)
                            GGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAG                                                          >  SRR4302532.45602/1‑94 (MQ=60)
                            GGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAG                                                          <  SRR4302532.1061097/94‑1 (MQ=60)
                               CGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAAC                                                       >  SRR4302532.3236019/1‑94 (MQ=60)
                               CGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAAC                                                       <  SRR4302532.2084622/94‑1 (MQ=60)
                                 AAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAA                                                     <  SRR4302532.1439756/94‑1 (MQ=60)
                                  AAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAAC                                                    <  SRR4302532.4471000/94‑1 (MQ=60)
                                  AAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAAC                                                    >  SRR4302532.5592002/1‑94 (MQ=60)
                                  AAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAAC                                                    <  SRR4302532.2762234/94‑1 (MQ=60)
                                    ACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGG                                                  <  SRR4302532.6083845/94‑1 (MQ=60)
                                    ACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGG                                                  >  SRR4302532.979167/1‑94 (MQ=60)
                                     CTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGT                                                 <  SRR4302532.2854711/94‑1 (MQ=60)
                                     CTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGT                                                 >  SRR4302532.6326535/1‑94 (MQ=60)
                                      TACCCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTA                                                <  SRR4302532.2450910/94‑1 (MQ=60)
                                         GCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACC                                             >  SRR4302532.2266209/1‑94 (MQ=60)
                                         CCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACC                                             <  SRR4302532.2000504/94‑1 (MQ=60)
                                          CCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCG                                            >  SRR4302532.2431676/1‑94 (MQ=60)
                                          CCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCG                                            >  SRR4302532.4421640/1‑94 (MQ=60)
                                          CCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCG                                            <  SRR4302532.4360201/94‑1 (MQ=60)
                                           CGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGT                                           <  SRR4302532.2935508/94‑1 (MQ=60)
                                             ACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCA                                         <  SRR4302532.1753812/94‑1 (MQ=60)
                                             ACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCA                                         <  SRR4302532.2570358/94‑1 (MQ=60)
                                              CAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAG                                        >  SRR4302532.4537244/1‑94 (MQ=60)
                                               AGCCAGCGGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCCGAACAACGGTAACCGTCAGC                                       >  SRR4302532.949021/1‑94 (MQ=60)
                                               AGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGC                                       >  SRR4302532.3484969/1‑94 (MQ=60)
                                               AGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGC                                       <  SRR4302532.2459178/94‑1 (MQ=60)
                                               AGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGC                                       >  SRR4302532.3657605/1‑94 (MQ=60)
                                                 CCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCAT                                     >  SRR4302532.5973742/1‑94 (MQ=60)
                                                 CCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCAT                                     >  SRR4302532.1930725/1‑94 (MQ=60)
                                                 CCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCAT                                     <  SRR4302532.3548661/94‑1 (MQ=60)
                                                  CAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATG                                    >  SRR4302532.2961880/1‑94 (MQ=60)
                                                  CAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCCTCCCGCAGAACAACGGTAACCGCCAGCATG                                    >  SRR4302532.3751596/1‑94 (MQ=60)
                                                      AGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCG                                <  SRR4302532.2319687/94‑1 (MQ=60)
                                                      AGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCG                                >  SRR4302532.1372637/1‑94 (MQ=60)
                                                      AGGCTAACATCATAGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGACAACTCTCCCTTCCCGCAGAACAACGGCAACCGTCAGGATGTCCG                                >  SRR4302532.5589995/1‑94 (MQ=57)
                                                       GGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGC                               >  SRR4302532.1597611/1‑94 (MQ=60)
                                                         CTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTG                             >  SRR4302532.2380979/1‑94 (MQ=60)
                                                         CTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTG                             >  SRR4302532.4698544/1‑94 (MQ=60)
                                                         CTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCCTCAGCATGTCCGCTG                             >  SRR4302532.4599105/1‑94 (MQ=60)
                                                          TAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGG                            >  SRR4302532.386145/1‑94 (MQ=60)
                                                          TAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGG                            >  SRR4302532.3760745/1‑94 (MQ=60)
                                                          TAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGG                            >  SRR4302532.4893424/1‑94 (MQ=60)
                                                            ACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGAC                          <  SRR4302532.6088938/94‑1 (MQ=60)
                                                             CATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACG                         <  SRR4302532.396683/94‑1 (MQ=60)
                                                             CATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACG                         <  SRR4302532.1820060/94‑1 (MQ=60)
                                                             CATCATCGATATCTGGCGC‑‑‑‑AGCCCCGTCGATGCCATGTTCTAGAACTATCCCTTCCTGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACG                         <  SRR4302532.6226311/94‑1 (MQ=60)
                                                              ATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGcggg                        >  SRR4302532.1607385/1‑90 (MQ=60)
                                                              ATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGG                        <  SRR4302532.1142662/94‑1 (MQ=60)
                                                                CATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCA                      >  SRR4302532.4333208/1‑94 (MQ=60)
                                                                 CTCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCAC                     <  SRR4302532.1724389/94‑1 (MQ=60)
                                                                 ATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCAC                     >  SRR4302532.4667136/1‑94 (MQ=60)
                                                                  TCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACT                    <  SRR4302532.944224/94‑1 (MQ=60)
                                                                  TCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACT                    <  SRR4302532.1571229/94‑1 (MQ=60)
                                                                   CGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACTG                   <  SRR4302532.3049434/94‑1 (MQ=60)
                                                                      tcgatatcgggcgcagcaCCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACT                    <  SRR4302532.201628/76‑1 (MQ=60)
                                                                      TATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACTGACT                >  SRR4302532.3878602/1‑94 (MQ=60)
                                                                      TATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACTGACT                <  SRR4302532.3076840/94‑1 (MQ=60)
                                                                      TATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACTGACT                >  SRR4302532.1772637/1‑94 (MQ=60)
                                                                           atctggcgcagcaCCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACTccata               >  SRR4302532.5182030/14‑89 (MQ=60)
                                                                           atctggcgcagcaCCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACTGACTA               >  SRR4302532.6009653/14‑94 (MQ=60)
                                                                            tctggcgcagcaCCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACTGACTAA              <  SRR4302532.5091711/82‑1 (MQ=60)
                                                                             ctggcgcagcaCCGTCGATGCCATGTGCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACTGACTAAC             <  SRR4302532.2910378/83‑1 (MQ=60)
                                                                              tggcgcagcaCCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACTGACTAACC            <  SRR4302532.4123983/84‑1 (MQ=60)
                                                                              tggcgcagcaCCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACTGACTAACC            <  SRR4302532.6159889/84‑1 (MQ=60)
                                                                               ggcgcagcaCCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACTGACTAACCG           <  SRR4302532.4460516/85‑1 (MQ=60)
                                                                                 cgcagcaCCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACTGACTAACCGCC         >  SRR4302532.1618471/8‑94 (MQ=60)
                                                                                 cgcagcaCCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACTGACTAACCGCC         >  SRR4302532.2759178/8‑94 (MQ=60)
                                                                                  gcggcaCCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACTGACTAACCGCCA        <  SRR4302532.6057274/88‑1 (MQ=60)
                                                                                  gcagcaCCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACTGACTAACCGCCA        <  SRR4302532.3332096/88‑1 (MQ=60)
                                                                                  gcagcaCCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACTGACTAACCGCCA        <  SRR4302532.920986/88‑1 (MQ=60)
                                                                                   cagcaCCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACTGACTAACCGCCAC       <  SRR4302532.791925/89‑1 (MQ=60)
                                                                                    agcaCCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACTGACTAACCGCCACG      >  SRR4302532.4853420/5‑94 (MQ=60)
                                                                                    agcaCCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACTGACTAACCGCCACG      >  SRR4302532.1813461/5‑94 (MQ=60)
                                                                                     gcaCCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACGGACTAACCGCCACGG     <  SRR4302532.3474849/91‑1 (MQ=60)
                                                                                     C‑‑CCGTCGATTCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACTGACTAACCGCCACGGTA   <  SRR4302532.1574581/94‑1 (MQ=60)
                                                                                      caCCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACTGACTAACCGCCACGGT    >  SRR4302532.5310818/3‑94 (MQ=60)
                                                                                      caCCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACTGACTAACCGCCACGGT    <  SRR4302532.4397757/92‑1 (MQ=60)
                                                                                      caCCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACTGACTAACCGCCACGGA    >  SRR4302532.1395793/3‑94 (MQ=60)
                                                                                        CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACTGACTAACCGCCACGGTAA  >  SRR4302532.3553858/1‑94 (MQ=60)
                                                                                        |                                                                                             
ATCAGGTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGC‑‑CAAG‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACTGACTAACCGCCACGGTAA  >  NC_000913/3222864‑3223041

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑