Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
521 |
238.2 |
12299412 |
96.0% |
11807435 |
93.0 |
Breseq alignment
N/A
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCT‑CCTCT‑C‑CTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCT‑CCCCAAACGGGGCGAGGGGACTGACCGA > NC_000913/3237165‑3237348
|
ATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGA > SRR4302532.1724752/1‑94 (MQ=60)
ATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGA > SRR4302532.2543252/1‑94 (MQ=60)
ATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGA > SRR4302532.2543253/1‑94 (MQ=60)
TGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGAG > SRR4302532.5981764/1‑94 (MQ=60)
GATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGAGA > SRR4302532.4761740/1‑94 (MQ=60)
ATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGAGAG < SRR4302532.1408599/94‑1 (MQ=60)
ATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGAGAG < SRR4302532.3759082/94‑1 (MQ=60)
AAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGAGAGGG < SRR4302532.4069770/94‑1 (MQ=60)
AAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGAGAGGG > SRR4302532.5522319/1‑94 (MQ=60)
AAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGAGAGGG < SRR4302532.1623385/94‑1 (MQ=60)
AGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTTTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGT > SRR4302532.5296637/1‑94 (MQ=60)
AGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGT < SRR4302532.1849366/94‑1 (MQ=60)
AGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGT < SRR4302532.1910570/94‑1 (MQ=60)
AGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGAGAGGGT < SRR4302532.710261/94‑1 (MQ=60)
AGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGAGAGGGT < SRR4302532.2720540/94‑1 (MQ=60)
GCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGAGAGGGTC < SRR4302532.4009711/94‑1 (MQ=60)
CAGCGGGGGGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCG < SRR4302532.1595596/94‑1 (MQ=60)
AGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGAGAGGGTCGG > SRR4302532.3558415/1‑94 (MQ=60)
AGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGAGAGGGTCGG > SRR4302532.10650/1‑94 (MQ=60)
AGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGAGAGGGTCGG > SRR4302532.4190907/1‑94 (MQ=60)
GCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCGGG < SRR4302532.1891558/94‑1 (MQ=60)
CGGGGTGGATAATTTTTAATCTGCCGAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCGGGG > SRR4302532.6117656/1‑94 (MQ=60)
GGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCGGGGT < SRR4302532.5174791/94‑1 (MQ=60)
GGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGAGAGGGTCGGGGT > SRR4302532.629523/1‑94 (MQ=60)
GGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGAGAGGGTCGGGGG > SRR4302532.629522/1‑94 (MQ=60)
GGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGAGAGGGTCGGGGG > SRR4302532.2245933/1‑94 (MQ=60)
GGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTG > SRR4302532.1657731/1‑94 (MQ=60)
GGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTG > SRR4302532.2426756/1‑94 (MQ=60)
GGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGAGAGGGTCGGGGTG < SRR4302532.4313271/94‑1 (MQ=60)
TGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGAGAGGGTCGGGGTGAGG > SRR4302532.3380537/1‑94 (MQ=60)
GGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGAGAGGGTCGGGGTGAGGG > SRR4302532.3061560/1‑94 (MQ=60)
ATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTA < SRR4302532.1057257/94‑1 (MQ=60)
ATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGAGAGGGTCGGGGTGAGGGTA > SRR4302532.107912/1‑94 (MQ=60)
ATAATTTTTAATCTGCCGAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGAGAGGGTCGGGGTGAGGGTA > SRR4302532.5682505/1‑94 (MQ=60)
TAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAA > SRR4302532.5304557/1‑94 (MQ=60)
AATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAAT > SRR4302532.1903240/1‑94 (MQ=60)
ATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCT‑CTCTTCCAGCGAGAGGGTCGGGGTGAGGGTAATT > SRR4302532.5731195/1‑94 (MQ=60)
TTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAATTT < SRR4302532.1517710/94‑1 (MQ=60)
TTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTT > SRR4302532.3840739/1‑94 (MQ=60)
TTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAATTTT < SRR4302532.4376678/94‑1 (MQ=60)
TTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAATTTT > SRR4302532.190714/1‑94 (MQ=60)
TAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAATTTTTCG > SRR4302532.5218722/1‑94 (MQ=60)
AATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAATTTTTCGC < SRR4302532.3649116/94‑1 (MQ=60)
AATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAATTTTTCGC > SRR4302532.5410462/1‑94 (MQ=60)
TCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAATTTTTCGCAC < SRR4302532.5020716/94‑1 (MQ=60)
CTGCCTAAGCCGTGTCCCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAATTTTTCGCACC < SRR4302532.637429/94‑1 (MQ=60)
CTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACC > SRR4302532.5450915/1‑94 (MQ=60)
TGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAATTTTTCGCACCG > SRR4302532.140209/1‑94 (MQ=60)
TGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAATTTTTCGCACCG > SRR4302532.5200211/1‑94 (MQ=60)
TGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAATTTTTCGCACCG < SRR4302532.3835554/94‑1 (MQ=60)
TGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAATTTTTCGCACCG < SRR4302532.3228651/94‑1 (MQ=60)
CCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTCCCC‑CCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGAT < SRR4302532.305393/94‑1 (MQ=60)
CCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGAT > SRR4302532.4381363/1‑94 (MQ=60)
CCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGAT < SRR4302532.305392/94‑1 (MQ=60)
CCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGAT > SRR4302532.6180426/1‑94 (MQ=60)
CTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATG > SRR4302532.5362052/1‑94 (MQ=60)
CTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATG > SRR4302532.3559394/1‑94 (MQ=60)
CTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATG > SRR4302532.5019178/1‑94 (MQ=60)
CTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGCGAGAGGGTCGGGGGGAGGGAAATTTTTTGCACTGATG > SRR4302532.614041/1‑94 (MQ=60)
TAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGAGAGGGTCGGGGCGAGGGTAATTTTTCGCACCGATGC > SRR4302532.2216238/1‑94 (MQ=60)
AAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCT < SRR4302532.6106228/94‑1 (MQ=60)
AGCCGTGTCCCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTG < SRR4302532.2708867/94‑1 (MQ=60)
AGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTG < SRR4302532.616752/94‑1 (MQ=60)
GCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGG > SRR4302532.2180465/1‑94 (MQ=60)
CCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGC < SRR4302532.102154/94‑1 (MQ=60)
CCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGC > SRR4302532.5118269/1‑94 (MQ=60)
CGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCC < SRR4302532.1126205/94‑1 (MQ=60)
CGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCC > SRR4302532.4794361/1‑94 (MQ=60)
TGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTG < SRR4302532.3381250/94‑1 (MQ=60)
GTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGT > SRR4302532.2523581/1‑94 (MQ=60)
ACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTC > SRR4302532.5929955/1‑94 (MQ=60)
CTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTTCCC > SRR4302532.1875468/1‑94 (MQ=60)
CTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCC > SRR4302532.5039906/1‑94 (MQ=60)
CTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGAGAGGGTCGGGGAGAGGGTAATTTTTCGCACCGATGCTGGCCTGCTGCCC > SRR4302532.4944962/1‑94 (MQ=60)
TGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCT > SRR4302532.1887516/1‑94 (MQ=60)
GTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTC > SRR4302532.5366384/1‑94 (MQ=60)
GTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTC < SRR4302532.4470686/94‑1 (MQ=60)
ATTAACATGAGCGCCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCccccc > SRR4302532.3812843/1‑89 (MQ=60)
AACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCCA > SRR4302532.1044890/1‑94 (MQ=60)
ATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTtcccccccccccccc > SRR4302532.5687900/1‑79 (MQ=60)
GAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCT < SRR4302532.6157058/94‑1 (MQ=60)
GAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCT < SRR4302532.5811674/94‑1 (MQ=60)
AGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTC < SRR4302532.680991/94‑1 (MQ=60)
CACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCT‑C < SRR4302532.5118200/94‑1 (MQ=60)
ACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCT‑CC < SRR4302532.3840516/94‑1 (MQ=60)
CCGTTT‑TCTCCCTCTCC‑CTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCCCCCCCCAACCCCCT‑CCC > SRR4302532.2121071/1‑94 (MQ=60)
GTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCcccctcaacccctccccc > SRR4302532.5258741/1‑76 (MQ=60)
TTT‑TCTCCCTCTCC‑CTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTttccccccccccacccccccccccc > SRR4302532.2467232/1‑69 (MQ=60)
TT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCT‑CCCCAAA < SRR4302532.1150255/94‑1 (MQ=60)
TT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCT‑CCCCAAA > SRR4302532.1230346/1‑94 (MQ=60)
TT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCT‑CCCCAAA > SRR4302532.1230347/1‑94 (MQ=60)
ttctccctctcC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTCACCCTCT‑CCCCAAAC > SRR4302532.4519627/12‑94 (MQ=60)
ttctccctctcC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCT‑CCCCAAAC < SRR4302532.3050836/83‑1 (MQ=60)
ctccctctcC‑CTTCCAGGGGGAGGGCCGGGGGGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAAACCTCT‑CCCCCAACGG > SRR4302532.2149585/10‑94 (MQ=60)
tccctctcC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCCCACCCccaccccctcccccaaaagg > SRR4302532.1771753/9‑74 (MQ=60)
tccctctcC‑CTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCCCACCCccaccccccccccccacagg > SRR4302532.476301/9‑74 (MQ=60)
ccctctcC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCT‑CCCCcaaccgcg > SRR4302532.4279777/8‑86 (MQ=60)
ccctctcC‑CTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGGTCCCCccccccccccccccccccccccccccc > SRR4302532.1240901/8‑67 (MQ=60)
CCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAATTTTTCGCACTGATGCTGGCCTGTTCCCCTCACCCCAACCCTCTCCCCCAAAGGGGG > SRR4302532.1887993/1‑94 (MQ=60)
CCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCTTCT‑CCCCAAACGGGGC < SRR4302532.3686021/94‑1 (MQ=60)
CCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCT‑CCCCAAACGGGGC < SRR4302532.276388/94‑1 (MQ=60)
CCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCT‑CCCCAAACGGGGC < SRR4302532.3686020/94‑1 (MQ=60)
CCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCT‑CCCCAAACGGGGC < SRR4302532.3955511/94‑1 (MQ=60)
CTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCTCCTCACCCccaccctcccccccccccccggg > SRR4302532.2733242/1‑71 (MQ=60)
CTCTCC‑CTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCT‑CCCCCAACGGGGCG > SRR4302532.5348086/1‑94 (MQ=60)
CTC‑‑C‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCT‑CCCCACACGGGGCGAG > SRR4302532.2354532/1‑94 (MQ=60)
C‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTtcccccccccccccccccccccccaccaccggcggggg > SRR4302532.180395/1‑56 (MQ=60)
C‑CTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCCCT‑CCCCAAACGGGGGGAGGGG > SRR4302532.4162351/1‑94 (MQ=60)
TTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTTCCCTCCCCCCAACCCTCT‑CCCCCAACCGGGCGAGGGGgg > SRR4302532.3008024/1‑92 (MQ=60)
CCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTtccacccccctcaaccgcccccccaatgcggggtatgggcta > SRR4302532.4102229/1‑52 (MQ=60)
CAGGGGGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTtccccccccccccccccctccccccacccgggcgggggggggg > SRR4302532.2649816/1‑51 (MQ=60)
AGGGGGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCT‑CCCCAAACGGGGCGAGGGGACTGAC > SRR4302532.5249727/1‑94 (MQ=60)
GGGAGGGGGGGGGGGGGAGGTTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCT‑CCCCAAACGGGGCGAGGGGACTGACC < SRR4302532.4415558/94‑1 (MQ=60)
GGGGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTttccccccccccaccccccccccccacacgggggggggggggggac > SRR4302532.2775940/1‑48 (MQ=60)
GGGGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCT‑CCCCAAACGGGGCGAGGGGACTGACCG < SRR4302532.2388045/94‑1 (MQ=60)
AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGAGCCTGGCCTGTTtcccccccccccacccccccccccaaaagggcgggggggggagcccgg > SRR4302532.1647664/1‑46 (MQ=60)
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ATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCT‑CCTCT‑C‑CTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCT‑CCCCAAACGGGGCGAGGGGACTGACCGA > NC_000913/3237165‑3237348
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
