Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 521 238.2 12299412 96.0% 11807435 93.0

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output
GGTGCTTACCAAAGTTACGACCTTCACCACCACCATGTGGGTGGTCTACCGGGTTCATCGCGGTACCGCGAACGGTCGGACGAACACCACGCCAGCGTGCAGCACCTGCTTTACCCAGAACGCGCAGCATATGCTCAGCATTGCCAACTTCGCCCAGAGTTGCACGGCAGTCTGCTTCTACTTTACG  >  NC_000913/3448272‑3448458
                                                                                             |                                                                                             
GGTGCTTACCAAAGTTACGACCTTCACCACCACCATGTGGGTGGTCTACCGGGTTCATCGCGGTACCGCGAACGGTCGGACGCACACCACGCCG                                                                                               >  SRR4302532.5000846/1‑94 (MQ=60)
 GTGCTTACCAAAGTTACGACCTTCACCACCACCATGTGGGTGGTCTACCGGGTTCATCGCGGTACCGCGAACGGTCGGACGAACACCACGCCGG                                                                                              >  SRR4302532.4955759/1‑94 (MQ=60)
 GTGCTTACCAAAGTTACGACCTTCACCACCACCATGTGGGTGGTCTACCGGGTTCATCGCGGTACCGCGAACGGTCGGACGAACACCACGCCAG                                                                                              >  SRR4302532.1804463/1‑94 (MQ=60)
   GCTTACCAAAGTTACGACCTTCACCACCACCATGTGGGTGGTCTACCGGGTTCATCGCGGTACCGCGAACGGTCGGACGAACACCACGCCGGCG                                                                                            >  SRR4302532.3206657/1‑94 (MQ=60)
    CTTACCAAAGTTACGACCTTCACCACCACCATGTGGGTGGTCTACCGGGTTCATCGCGGTACCGCGAACGGTCGGACGAACACCACGCCAGCGT                                                                                           <  SRR4302532.5238501/94‑1 (MQ=60)
     TTACCAAAGTTACGACCTTCACCACCACCATGTGGGTGGTCTACCGGGTTCATCGCGGTACCGCGAACGGTCGGACGAACACCACGCCGGCGTG                                                                                          >  SRR4302532.2955118/1‑94 (MQ=60)
      TACCAAAGTTACGACCTTCACCACCACCATGTGGGTGGTCTACCGGGTTCATCGCGGTACCGCGAACGGTCGGACGAACACCACGCCAGCGTGC                                                                                         <  SRR4302532.3635004/94‑1 (MQ=60)
       ACCAAAGTTACGACCTTCACCACCACCATGTGGGTGGTCTACCGGGTTCATCGCGGTACCGCGAACGGTCGGACGAACACCACGCCGGCGTGCA                                                                                        >  SRR4302532.53070/1‑94 (MQ=60)
       ACCAAAGTTACGACCTTCACCACCACCATGTGGGTGGTCTACCGGGTTCATCGCGGTACCGCGAACGGTCGGACGAACACCACGCCGGCGTGCA                                                                                        >  SRR4302532.2363007/1‑94 (MQ=60)
          AAAGTTACGACCTTCACCACCACCATGTGGGTGGTCTACCGGGTTCATCGCGGTACCGCGAACGGTCGGACGAACACCACGCCGGCGTGCAGCA                                                                                     <  SRR4302532.4209411/94‑1 (MQ=60)
          AAAGTTACGACCTTCACCACCACCATGTGGGTGGTCTACCGGGTTCATCGCGGTACCGCGAACGGTCGGACGAACACCACGCCGGCGTGCAGCA                                                                                     >  SRR4302532.3890004/1‑94 (MQ=60)
          AAAGTTACGACCTTCACCACCACCATGTGGGTGGTCTACCGGGTTCATCGCGGTACCGCGAACGGTCGGACGAACACCACGCCAGCGTGCAGCA                                                                                     >  SRR4302532.2930414/1‑94 (MQ=60)
            AGTTACGACCTTCACCACCACCATGTGGGTGGTCTACCGGGTTCATCGCGGTACCGCGAACGGTCGGACGAACACCACGCCGGCGTGGAGCACC                                                                                   >  SRR4302532.2138647/1‑94 (MQ=60)
             GTTACGACCTTCACCACCACCATGTGGGTGGTCTACCGGGTTCATCGCGGTACCGCGAACGGTCGGACGAACACCACGCCGGCGTGCAGCACCT                                                                                  <  SRR4302532.3460509/94‑1 (MQ=60)
             GTTACGACCTTCACCACCACCATGTGGGTGGTCTACCGGGTTCATCGCGGTACCGCGAACGGTCGGACGAACACCACGCCGGCGTGCAGCACCT                                                                                  <  SRR4302532.3932615/94‑1 (MQ=60)
              TTACGACCTTCACCACCACCATGTGGGTGGTCTACCGGGTTCATCGCGGTACCGCGAACGGTCGGACGAACACCACGCCGGCGTGCAGCACCTG                                                                                 <  SRR4302532.2544158/94‑1 (MQ=60)
              TTACGACCTTCACCACCACCATGTGGGTGGTCTACCGGGTTCATCGCGGTACCGCGAACGGTCGGACGAACACCACGCCGGCGTGCAGCACCTG                                                                                 >  SRR4302532.2094106/1‑94 (MQ=60)
               TACGACCTTCACCACCACCATGTGGGTGGTCTACCGGGTTCATCGCGGTACCGCGAACGGTCGGACGAACACCACGCCGGCGGGCAGCACCTGT                                                                                >  SRR4302532.5355545/1‑94 (MQ=60)
                 CGACCTTCACCACCACCATGTGGGTGGTCTACCGGGTTCATCGCGGTACCGCGAACGGTCGGACGAACACCACGCCAGCGTGCAGCACCTGCTT                                                                              >  SRR4302532.6244296/1‑94 (MQ=60)
                  GACCTTCACCACCACCATGTGGGTGGTCTACCGGGTTCATCGCGGTACCGCGAACGGTCGGACGAACACCACGCCGGCGTGCAGCACCTGCTTT                                                                             >  SRR4302532.3289313/1‑94 (MQ=60)
                  GACCTTCACCACCACCATGTGGGTGGTCTACCGGGTTCATCGCGGTACCGCGAACGGTCGGACGAACACCACGCCAGCGTGCAGCACCTGCTTT                                                                             <  SRR4302532.3504375/94‑1 (MQ=60)
                  GACCTTCACCACCACCATGTGGGTGGTCTACCGGGTTCATCGCGGTACCGCGAACGGTCGGACGAACACCACGCCAGCGTGCAGCACCTGCTTT                                                                             <  SRR4302532.1145238/94‑1 (MQ=60)
                    CCTTCACCACCACCATGTGGGTGGTCTACCGGGTTCATCGCGGTACCGCGAACGGTCGGACGAACACCACGCCGGCGTGCAGCACCTGCTTTAC                                                                           <  SRR4302532.5634468/94‑1 (MQ=60)
                    CCTTCACCACCACCATGTGGGTGGTCTACCGGGTTCATCGCGGTACCGCGAACGGTCGGACGAACACCACGCCGGCGTGCAGCACCTGCTTTAC                                                                           >  SRR4302532.4698301/1‑94 (MQ=60)
                    CCTTCACCACCACCATGTGGGTGGTCTACCGGGTTCATCGCGGTACCGCGAACGGTCGGACGAACACCACGCCAGCGTGCAGCACCTGCTTTAC                                                                           <  SRR4302532.5007434/94‑1 (MQ=60)
                    CCTTCACCACCACCATGTGGGTGGTCTACCGGGTTCATCGCGGTACCGCGAACGGTCGGACGAACACCACGCCAGCGTGCAGCACCTGCTTTAC                                                                           >  SRR4302532.3242130/1‑94 (MQ=60)
                     CTTCACCACCACCATGTGGGTGGTCTACCGGGTTCATCGCGGTACCGCGAACGGTCGGACGAACACCACGCCGGCGTGCAGCACCTGCTTTACC                                                                          >  SRR4302532.1043088/1‑94 (MQ=60)
                     CTTCACCACCACCATGTGGGTGGTCTACCGGGTTCATCGCGGTACCGCGAACGGTCGGACGAACACCACGCCAGCGTGCAGCACCTGCTTTACC                                                                          <  SRR4302532.1667626/94‑1 (MQ=60)
                      TTCACCACCACCATGTGGGTGGTCTACCGGGTTCATCGCGGTACCGCGAACGGTCGGACGAACACCACGCCAGCGTGCAGCACCTGCTTTACCC                                                                         <  SRR4302532.5765393/94‑1 (MQ=60)
                      TTCACCACCACCATGTGGGTGGTCTACCGGGTTCATCGCGGTACCGCGAACGGTCGGACGAACACCACGCCAGCGTGCAGCACCTGCTTTACCC                                                                         >  SRR4302532.1808926/1‑94 (MQ=60)
                       TCACCACCACCATGTGGGTGGTCTACCGGGTTCATCGCGGTACCGCGAACGGTCGGACGAACACCACGCCGGCGTGCAGCACCTGCTTTACCCA                                                                        >  SRR4302532.5165021/1‑94 (MQ=60)
                        CACCACCACCATGTGGGTGGTCTACCGGGTTCATCGCGGTACCGCGAACGGTCGGACGAACACCACGCCAGCGTGCAGCACCTGCTTTACCCAG                                                                       >  SRR4302532.670536/1‑94 (MQ=60)
                           CACCACCATGTGGGTGGTCTACCGGGTTCATCGCGGTACCGCGAACGGTCGGACGAACACCACGCCGGCGTGCAGCACCTGCTTTACCCAGAAC                                                                    <  SRR4302532.1839399/94‑1 (MQ=60)
                           CACCACCATGTGGGTGGTCTACCGGGTTCATCGCGGTACCGCGAACGGTCGGACGAACACCACGCCAGCGTGCAGCACCTGCTTTACCCAGAAC                                                                    <  SRR4302532.3632824/94‑1 (MQ=60)
                           CACCACCATGTGGGTGGTCTACCGGGTTCATCGCGGTACCGCGAACGGTCGGACGAACACCACGCCAGCGTGCAGCACCTGCTTTACCCAGAAC                                                                    <  SRR4302532.5043308/94‑1 (MQ=60)
                            CCCACCATGTGGGTGGTCTACCGGGTTCATCGCGGTACCGCGAACGGTCGGACGAACACCACGCCGGCGTGCAGCACCTGCTTTACCCAGAACG                                                                   <  SRR4302532.5338140/94‑1 (MQ=60)
                            CCCACCATGTGGGTGGTCTACCGGGTTCATCGCGGTACCGCGAACGGTCGGACGAACACCACGCCAGCGTGCAGCACCTGCTTTACCCAGAACG                                                                   <  SRR4302532.391747/94‑1 (MQ=60)
                              CACCATGTGGGTGGTCTACCGGGTTCATCGCGGTACCGCGAACGGTCGGACGAACACCACGCCGGCGTGCAGCACCTGCTTTACCCAGAACGCG                                                                 <  SRR4302532.2530609/94‑1 (MQ=60)
                              CACCATGTGGGTGGTCTACCGGGTTCATCGCGGTACCGCGAACGGTCGGACGAACACCACGCCAGCGTGCAGCACCTGCTTTACCCAGAACGCG                                                                 <  SRR4302532.4880470/94‑1 (MQ=60)
                              CACCATGTGGGTGGTCTACCGGGTTCATCGCGGTACCGCGAACGGTCGGACGAACACCACGCCAGCGTGCAGCACCTGCTTTACCCAGAACGCG                                                                 <  SRR4302532.1406616/94‑1 (MQ=60)
                              CACCATGTGGGTGGTCTACCGGGTTCATCGCGGTACCGCGAACGGTCGGACGAACACCACGCCAGCGTGCAGCACCTGCTTTACCCAGAACGCG                                                                 <  SRR4302532.5888874/94‑1 (MQ=60)
                                 CATGTGGGTGGTCTACCGGGTTCATCGCGGTACCGCGAACGGTCGGACGAACACCACGCCGGCGTGCAGCACCTGCTTTACCCAGAACGCGCAG                                                              <  SRR4302532.4871277/94‑1 (MQ=60)
                                  ATGTGGGTGGTCTACCGGGTTCATCGCGGTACCGCGAACGGTCGGACGAACACCACGCCGGCGTGCAGCACCTGCTTTACCCAGAACGCGCAGC                                                             >  SRR4302532.2884084/1‑94 (MQ=60)
                                   TGTGGGTGGTCTACCGGGTTCATCGCGGTACCGCGGACGGTCGGACGAACACCACGCCCGCGTGCAGCACCTGCTTTAACCAGCACGCGCcgaa                                                            >  SRR4302532.3926637/1‑90 (MQ=60)
                                    GTGGGTGGTCTACCGGGTTCATCGCGGTACCGCGAACGGTCGGACGAACACCACGCCGGCGTGCAGCACCTGCTTTACCCAGAACGCGCAGCAT                                                           <  SRR4302532.4031317/94‑1 (MQ=60)
                                    GTGGGTGGTCTACCGGGTTCATCGCGGTACCGCGAACGGTCGGACGAACACCACGCCGGCGTGCAGCACCTGCTTTACCCAGAACGCGCAGCAT                                                           >  SRR4302532.5219307/1‑94 (MQ=60)
                                      GGGTGGTCTACCGGGTTCATCGCGGTACCGCGAACGGTCGGACGAACACCACGCCAGCGTGCAGCACCTGCTTTACCCAGAACGCGCAGCATAT                                                         <  SRR4302532.5882260/94‑1 (MQ=60)
                                        GTGGTCTACCGGGTTCATCGCGGTACCGCGAACGGTCGGACGAACACCACGCCGGCGTGCAGCACCTGCTTTACCCAGAACGCGCAGCATATGC                                                       <  SRR4302532.4636018/94‑1 (MQ=60)
                                          GGTCTACCGGGTTCATCGCGGTACCGCGAGCGGTCGGACGAACACCACGCCGGCGTGCAGCACCTGCTTTACCCAGAACGCGCCGCATATGCGC                                                     >  SRR4302532.1405794/1‑94 (MQ=60)
                                           GTCTACCGGGTTCATCGCGGTACCGCGAACGGTCGGACGAACACCACGCCGGCGTGCAGCACCTGCTTTACCCAGAACGCGCAGCATATGCTCA                                                    <  SRR4302532.1205528/94‑1 (MQ=60)
                                           GTCTACCGGGTTCATCGCGGTACCGCGAACGGTCGGACGAACACCACGCCGGCGTGCAGCACCTGCTTTACCCAGAACGCGCAGCATATGCTCA                                                    <  SRR4302532.1920929/94‑1 (MQ=60)
                                            TCTACCGGGTTCATCGCGGTACCGCGAACGGTCGGACGAACACCACGCCGGCGTGCAGCACCTGCTTTACCCAGAACGCGCAGCATATGCTCAG                                                   <  SRR4302532.5710383/94‑1 (MQ=60)
                                            TCTACCGGGTTCATCGCGGTACCGCGAACGGTCGGACGAACACCACGCCAGCGTGCAGCACCTGCTTTACCCAGAACGCGCAGCATATGCTCAG                                                   <  SRR4302532.2195670/94‑1 (MQ=60)
                                            TCTACCGGGTTCATCGCGGTACCGCGAACGGTCGGACGAACACCACGCCAGCGTGCAGCACCTGCTTTACCCAGAACGCGCAGCATATGCTCAG                                                   <  SRR4302532.6215249/94‑1 (MQ=60)
                                            TCTACCGGGTTCATCGCGGTACCGCGAACGGTCGGACGAACACCACGCCAGCGTGCAGCACCTGCTTTACCCAGAACGCGCAGCATATGCTCAG                                                   <  SRR4302532.4105997/94‑1 (MQ=60)
                                            TCTACCGGGTTCATCGCGGTACCGCGAACGGTCGGACGAACACCACGCCAGCGTGCAGCACCTGCTTTACCCAGAACGCGCAGCATATGCTCAG                                                   >  SRR4302532.3557511/1‑94 (MQ=60)
                                             CTACCGGGTTCATCGCGGTACCGCGAACGGTCGGACGAACACCACGCCGGCGTGCAGCACCTGCTTTACCCAGAACGCGCAGCATATGCTCAGC                                                  >  SRR4302532.1110239/1‑94 (MQ=60)
                                             CTACCGGGTTCATCGCGGTACCGCGAACGGTCGGACGAACACCACGCCGGCGTGCAGCACCTGCTTTACCCAGAACGCGCAGCATATGCTCAGC                                                  >  SRR4302532.5296956/1‑94 (MQ=60)
                                              TACCGGGTTCATCGCGGTACCGCGAACGGTCGGACGAACACCACGCCGGCGTGCAGCACCTGCTTTACCCAGAACGCGCAGCATATGCTCAGCA                                                 >  SRR4302532.549470/1‑94 (MQ=60)
                                              TACCGGGTTCATCGCGGTACCGCGAACGGTCGGACGAACACCACGCCGGCGTGCAGCACCTGCTTTACCCAGAACGCGCAGCATATGCTCAGCA                                                 >  SRR4302532.549471/1‑94 (MQ=60)
                                               ACCGGGTTCATCGCGGTACCGCGAACGGTCGGACGAACACCACGCCGGCGTGCAGCACCTGCTTTACCCAGAACGCGCAGCATATGCTCAGCAT                                                <  SRR4302532.5346779/94‑1 (MQ=60)
                                               ACCGGGTTCATCGCGGTACCGCGAACGGTCGGACGAACACCACGCCAGCGTGCAGCACCTGCTTTACCCAGAACGCGCAGCATATGCTCAGCAT                                                <  SRR4302532.5605034/94‑1 (MQ=60)
                                               ACCGGGTTCATCGCGGTACCGCGAACGGTCGGACGAACACCACGCCAGCGTGCAGCACCTGCTTTACCCAGAACGCGCAGCATATGCTCAGCAT                                                <  SRR4302532.869216/94‑1 (MQ=60)
                                                 CGGGTTCATCGCGGTACCGCGAACGGTCGGACGAACACCACGCCGGCGTGCAGCACCTGCTTTACCCAGAACGCGCAGCATATTCTACGCATTG                                              >  SRR4302532.1451647/1‑94 (MQ=60)
                                                 CGGGTTCATCGCGGTACCGCGAACGGTCGGACGAACACCACGCCGGCGTGCAGCACCTGCTTTACCCAGAACGCGCAGCATATGCTCAGCATTG                                              >  SRR4302532.4493060/1‑94 (MQ=60)
                                                 CGGGTTCATCGCGGTACCGCGAACGGTCGGACGAACACCACGCCGGCGTGCAGCACCTGCTTTACCCAGAACGCGCAGCATATGCTCAGCATTG                                              >  SRR4302532.5666010/1‑94 (MQ=60)
                                                 CGGGTTCATCGCGGTACCGCGAACGGTCGGACGAACACCACGCCAGCGTGCAGCACCTGCTTTACCCAGAACGCGCAGCATATGCTCAGCATTG                                              >  SRR4302532.4236723/1‑94 (MQ=60)
                                                 CGGGTTCATCGCGGTACCGCGAACGGTCGGACGAACACCACGCCAGCGTGCAGCACCTGCTTTACCCAGAACGCGCAGCATATGCTCAGCATTG                                              >  SRR4302532.4851721/1‑94 (MQ=60)
                                                  GGGTTCATCGCGGTACCGCGAACGGTCGGACGAACACCACGCCAGCGTGCAGCACCTGCTTTACCCAGAACGCGCAGCATATGCTCAGCATTGC                                             <  SRR4302532.2861059/94‑1 (MQ=60)
                                                  GGGTTCATCGCGGTACCGCGAACGGTCGGACGAACACCACGCCAGCGTGCAGCACCTGCTTTACCCAGAACGCGCAGCATATGCTCAGCATTGC                                             <  SRR4302532.6269819/94‑1 (MQ=60)
                                                   GGTTCATCGCGGTACCGCGAACGGTCGGACGAACACCACGCCAGCGTGCAGCACCTGCTTTACCCAGAACGCGCAGCATATGCTCAGCATTGCC                                            >  SRR4302532.1330460/1‑94 (MQ=60)
                                                    GTTCATCGCGGTACCGCGAACGGTCGGACGAACACCACGCCAGCGTGCAGCACCTGCTTTACCCAGAACGCGCAGCATATGCTCAGCATTGCCA                                           >  SRR4302532.5565170/1‑94 (MQ=60)
                                                      TCATCGCGGTACCGCGAACGGTCGGACGAACACCACGCCGGCGTGCAGCACCTGCTTTACCCAGAACGCGCAGCATATGCTCAGCATTGCCAAC                                         >  SRR4302532.2252207/1‑94 (MQ=60)
                                                       CATCGCGGTACCGCGAACGGTCGGACGAACACCACGCCGGCGTGCAGCACCTGCTTTACCCAGAACGCGCAGCATATGCTCAGCATTGCCAACT                                        >  SRR4302532.5590191/1‑94 (MQ=60)
                                                       CATCGCGGTACCGCGAACGGTCGGACGAACACCACGCCGGCGTGCAGCACCTGCTTTACCCAGAACGCGCAGCATATGCTCAGCATTGCCAACT                                        <  SRR4302532.4472940/94‑1 (MQ=60)
                                                        ATCGCGGTACCGCGAACGGTCGGACGAACACCACGCCAGCGTGCAGCACCTGCTTTACCCAGAACGCGCAGCATATGCTCAGCATTGCCAACTT                                       >  SRR4302532.4815560/1‑94 (MQ=60)
                                                         TCGCGGTACCGCGAACGGTCGGACGAACACCACGCCAGCGTGCAGCACCTGCTTTACCCAGAACGCGCAGCATATGCTCAGCATTGCCAACTTC                                      <  SRR4302532.534641/94‑1 (MQ=60)
                                                          CGCGGTACCGCGAACGGTCGGACGAACACCACGCCGGCGTGCAGCACCTGCTTTACCCAGAACGCGCAGCATATGCTCAGCATTGCCAACTTCG                                     <  SRR4302532.6218278/94‑1 (MQ=60)
                                                          CGCGGTACCGCGAACGGTCGGACGAACACCACGCCAGCGTGCAGCACCTGCTTTACCCAGAACGCGCAGCATATGCTCAGCATTGCCAACTTCG                                     >  SRR4302532.4784708/1‑94 (MQ=60)
                                                            CGGTACCGCGAACGGTCGGACGAACACCACGCCGGCGTGCAGCACCTGCTTTACCCAGAACGCGCAGCATATGCTCAGCATTGCCAACTTCGCC                                   <  SRR4302532.1390401/94‑1 (MQ=60)
                                                             GGTACCGCGAACGGTCGGACGAACACCACGCCGGCGTGCAGCACCTGCTTTACCCAGAACGCGCAGCATATGCTCAGCATTGCCAACTTCGCCC                                  >  SRR4302532.2525625/1‑94 (MQ=60)
                                                             GGTACCGCGAACGGTCGGACGAACACCACGCCAGCGTGCAGCACCTGCTTTACCCAGAACGCGCAGCATATGCTCAGCATTGCCAACTTCGCCC                                  <  SRR4302532.5713791/94‑1 (MQ=60)
                                                             GGTACCGCGAACGGTCGGACGAACACCACGCCAGCGTGCAGCACCTGCTTTACCCAGAACGCGCAGCATATGCTCAGCATTGCCAACTTCGCCC                                  >  SRR4302532.4579241/1‑94 (MQ=60)
                                                              GTACCGCGAATGGTCGGACGAACACCACGCCGGCGTGCAGCACCTGCTTTACCCAGAACGCGCAGCATATGCTCAGCATTGCCAACTTCGCCCA                                 <  SRR4302532.4011661/94‑1 (MQ=60)
                                                               TACCGCGAACGGTCGGACGAACACCACGCCAGCGTGCAGCACCTGCTTTACCCAGAACGCGCAGCATATGCTCAGCATTGCCAACTTCGCCCAG                                <  SRR4302532.4350884/94‑1 (MQ=60)
                                                                 CCGCGAACGGTCGGACGACCACCACGCCAGCGTGCAGCACCTGCTTTACCCAGATCGCGCAGCATATGCTCAGCATTGCCAACTTCTCCCAGAG                              <  SRR4302532.4200244/94‑1 (MQ=60)
                                                                 CCGCGAACGGTCGGACGAACACCACGCCGGCGTGCAGCACCTGCTTTACCCAGAACGCGCAGCATATGCTCAGCATTGCCAACTTCGCCCAGAG                              <  SRR4302532.3699307/94‑1 (MQ=60)
                                                                  CGCGAACGGTCGGACGAACACCACGCCAGCGTGCAGCACCTGCTTTAACCAGAACGCGCAGCATATGCTCAGCATTGCCAACTTCGCCCAGAGT                             >  SRR4302532.3634474/1‑94 (MQ=60)
                                                                   GCGAACGGTCGGACGAACACCACGCCGGCGTGCAGCACCTGCTTTACCCAGAACGCGCAGCATATGCTCAGCATTGCCAACTTCGCCCAGAGTT                            >  SRR4302532.3829125/1‑94 (MQ=60)
                                                                   GCGAACGGTCGGACGAACACCACGCCAGCGTGCAGCACCTGCTTTACCCAGAACGCGCAGCATATGCTCAGCATTGCCAACTTCGCCCAGAGTT                            <  SRR4302532.3523587/94‑1 (MQ=60)
                                                                    CGAACGGTCGGACGAACACCACGCCGGCGTGCAGCACCTGCTTTACCCAGAACGCGCAGCATATGCTCAGCATTGCCAACTTCGCCCAGAGTTG                           >  SRR4302532.746116/1‑94 (MQ=60)
                                                                    CGAACGGTCGGACGAACACCACGCCGGCGTGCAGCACCTGCTTTACCCAGAACGCGCAGCATATGCTCAGCATTGCCAACTTCGCCCAGAGTTG                           <  SRR4302532.328619/94‑1 (MQ=60)
                                                                    CGAACGGTCGGACGAACACCACGCCGGCGTGCAGCACCTGCTTTACCCAGAACGCGCAGCATATGCTCAGCATTGCCAACTTCGCCCAGAGTTG                           >  SRR4302532.2823171/1‑94 (MQ=60)
                                                                     GAACGGTCGGACGAACACCACGCCAGCGTGCAGCACCTGCTTTACCCAGAACGCGCAGCATATGCTCAGCATTGCCAACTTCGCCCAGAGTTGC                          <  SRR4302532.3443208/94‑1 (MQ=60)
                                                                       ACGGTCGGACGAACCCCACGCCAGCGTGCAGCACCTGCTTTACCCAGAACGCGCAGCATATGCTCAGCATTGCCAACTTCGCCCAGAGTTGCAC                        <  SRR4302532.5385130/94‑1 (MQ=60)
                                                                        CGGCCGGACGAACACCACGCCGCCGTGCAGCACCTGCTTTACCCAGAACCCGCAGCATATGCTCAGaatatcaaacatagccccaagtttcacg                       >  SRR4302532.1443782/1‑66 (MQ=60)
                                                                         GGTCGGACGAACACCACGCCAGCGTGCAGCACCTGCTTTACCCAGAACGCGCAGCATATGCTCAGCATTGCCAACTTCGCCCAGAGTTGCACGG                      <  SRR4302532.6040009/94‑1 (MQ=60)
                                                                          GTCGGACGAACACCACGCCAGCGTGCAGCACCTGCTTTACCCAGAACGCGCAGCATATGCTCAGCATTGCCAACTTCGCCCAGAGTTGCACGGC                     <  SRR4302532.2488339/94‑1 (MQ=60)
                                                                           TCGGACGAACGCCACGCCAGCGTGCAGCACCTGCTTTACCCAGAACGCGCAGCATATGCTCAGCATTGCCAACTTCGCCCAGAGTTGCACGGCA                    <  SRR4302532.534679/94‑1 (MQ=60)
                                                                           TCGGACGAACACCACGCCGGCGTGCAGCACCTGCTTTACCCAGAACGCGCAGCATATGCTCAGCATTGCCAACTTCGCCCAGAGTTGCACGGCA                    >  SRR4302532.1862385/1‑94 (MQ=60)
                                                                           TCGGACGAACACCACGCCAGCGTGCAGCACCTGCTTTACCCAGAACGCGCAGCATATGCTCAGCATTGCCAACTTCGCCCAGAGTTGCACGGCA                    <  SRR4302532.3118252/94‑1 (MQ=60)
                                                                            CGGACGAACACCACGCCGGCGTGCAGCACCTGCTTTACCCAGAACGCGCAGCATATGCTCAGCATTGCCAACTTCGCCCAGAGTTGCACGGCAG                   >  SRR4302532.1237826/1‑94 (MQ=60)
                                                                             GGACGAACACCACGCCGGCGTGCAGCACCTGCTTTACCCAGAACGCGCAGCATATGCTCAGCATTGCCAACTTCGCCCAGAGTTGCACGGCAGT                  >  SRR4302532.1843167/1‑94 (MQ=60)
                                                                               ACGAACACCACGCCGGCGTGCAGCACCTGCTTTACCCAGAACGCGCAGCATATGCTCAGCATTGCCAACTTCGCCCAGAGTTGCACGGCAGTCT                <  SRR4302532.5765974/94‑1 (MQ=60)
                                                                               ACGAACACCACGCCGGCGTGCAGCACCTGCTTTACCCAGAACGCGCAGCATATGCTCAGCATTGCCAACTTCGCCCAGAGTTGCACGGCAGTCT                <  SRR4302532.993877/94‑1 (MQ=60)
                                                                               ACGAACACCACGCCGGCGTGCAGCACCTGCTTTACCCAGAACGCGCAGCATATGCTCAGCATTGCCAACTTCGCCCAGAGTTGCACGGCAGTCT                <  SRR4302532.1114500/94‑1 (MQ=60)
                                                                               ACGAACACCACGCCGGCGTGCAGCACCTGCTTTACCCAGAACGCGCAGCATATGCTCAGCATTGCCAACTTCGCCCAGAGTTGCACGGCAGTCT                <  SRR4302532.3475740/94‑1 (MQ=60)
                                                                               ACGAACACCACGCCAGCGTGCAGCACCTGCTTTACCCAGAACGCGCAGCATATGCTCAGCATTGCCAACTTCGCCCAGAGTTGCACGGCAGTCT                <  SRR4302532.6141078/94‑1 (MQ=60)
                                                                                CGAACACCACGCCGGCGTGCAGCACCTGCTTTACCCAGAACGCGCAGCATATGCTCAGCATTGCCAACTTCGCCCAGAGTTGCACGGCAGTCTG               >  SRR4302532.4042497/1‑94 (MQ=60)
                                                                                CGAACACCACGCCAGCGTGCAGCACCTGCTTTACCCAGAACGCGCAGCATATGCTCAGCATTGCCAACTTCGCCCAGAGTTGCACGGCAGTCTG               <  SRR4302532.1541956/94‑1 (MQ=60)
                                                                                CGAACACCACGCCAGCGTGCAGCACCTGCTTTACCCAGAACGCGCAGCATATGCTCAGCATTGCCAACTTCGCCCAGAGTTGCACGGCAGTCTG               >  SRR4302532.1518053/1‑94 (MQ=60)
                                                                                 GAACACCACGCCGGCGTGCAGCACCTGCTTTACCCAGAACGCGCAGCATATGCTCAGCATTGCCAACTTCGCCCAGAGTTGCACGGCAGTCTGC              >  SRR4302532.2278231/1‑94 (MQ=60)
                                                                                  AACACCACGCCGGCGTGCAGCACCTGCTTTACCCAGAACGCGCAGCATATGCTCAGCATTGCCAACTTCGCCCAGAGTTGCACGGCAGTCTGCT             >  SRR4302532.5416947/1‑94 (MQ=60)
                                                                                   ACACCACGCCAGCGTGCAGCACCTGCTTTACCCAGAACGCGCAGCATATGCTCAGCATTGCCAACTTCGCCCAGAGTTGCACGGCAGTCTGCTT            >  SRR4302532.222000/1‑94 (MQ=60)
                                                                                     ACCACGCCAGCGTGCAGCACCTGCTTTACCCAGAACGCGCAGCATATGCTCAGCATTGCCAACTTCGCCCAGAGTTGCACGGCAGTCTGCTTCT          <  SRR4302532.3386147/94‑1 (MQ=60)
                                                                                      CCACGCCGGCGTGCAGCACCTGCTTTACCCAGAACGCGCAGCATATGCTCAGCATTGCCAACTTCGCCCAGAGTTGCACGGCAGTCTGCTTCTA         <  SRR4302532.4060457/94‑1 (MQ=60)
                                                                                      CCACGCCGGCGTGCAGCACCTGCTTTACCCAGAACGCGCAGCATATGCTCAGCATTGCCAACTTCGCCCAGAGTTGCACGGCAGTCTGCTTCTA         <  SRR4302532.4060456/94‑1 (MQ=60)
                                                                                      CCACGCCGGCGTGCAGCACCTGCTTTACCCAGAACGCGCAGCATATGCTCAGCATTGCCAACTTCGCCCAGAGTTGCAAGGCAGTCTcattctc         >  SRR4302532.4941218/1‑87 (MQ=60)
                                                                                      CCACGCCAGCGTGCAGCACCTGCTTTACCCAGAACGCGCAGCATATGCTCAGCATTGCCAACTTCGCCCAGAGTTGCACGGCAGTCTGCTTCTA         >  SRR4302532.546238/1‑94 (MQ=60)
                                                                                       CACGCCGGCGTGCAGCGCCGGCTTGACCCAGAACGCGCAGCATATGCTCAGCATTGCCAGCTTCGCCCAGAGTTGCACGGCAGTCTGCTTCTAC        <  SRR4302532.2686542/94‑1 (MQ=60)
                                                                                       CACCCCAGCCTGCAGCCCCTGCTTTACCCAGAACGCGCAGCATATGCTCAGCATTGCCAACTTCGCCCAGAGTTGCACGGCAGTCTGCTTCTAC        <  SRR4302532.2207270/94‑1 (MQ=60)
                                                                                        CCGCCAGCGTGCAGCACCTGCTTTACCCAGAACGCGCAGCATATGCTCAGCATTGCCAACTTCGCCCAGAGTTGCACGGCAGTCTGCTTCTACT       <  SRR4302532.4330981/94‑1 (MQ=60)
                                                                                         CGCCGGCGTGCAGCACCTGCTTTACCCAGAACGCGCAGCATATGCTCAGCATTGCCAACTTCGCCCAGAGTTGCACGGCAGTCTGCTTCTACTT      >  SRR4302532.5743644/1‑94 (MQ=60)
                                                                                         CGCCGGCGTGCAGCACCTGCTTTACCCAGAACGCGCAGCATATGCTCAGCATTGCCAACTTCGCCCAGAGTTGCACGGCAGTCTGCTTCTACTT      <  SRR4302532.671258/94‑1 (MQ=60)
                                                                                         CGCCGCCGTGCAGCACCTGCTTTACCCAGAACGCGCAGCATATGCTCAGCATTGCCAACTTCGCCCAGAGTTGCACGGCAGTCTGCTTCTAGTT      >  SRR4302532.3501423/1‑94 (MQ=60)
                                                                                         CGCCAGCGTGCAGCACCTGCTTTACCCAGAACGCGCAGCATATGCTCAGCATTGCCAACTTCGCCCAGAGTTGCACGGCAGTCTGCTTCTACTT      <  SRR4302532.3160937/94‑1 (MQ=60)
                                                                                         CGCCAGCGTGCAGCACCGGCTTTACCCAGAACGCGCAGCATATGCTCAGCATTGCCAACTTCGCCCAGAGTTGCACGGCAGTCTGCTTCTACTT      >  SRR4302532.4308561/1‑94 (MQ=60)
                                                                                          GCCAGCGTGCAGCACCTGCTTTACCCAGAACGCGCAGCATATGCTCAGCATTGCCAACTTCGCCCAGAGTTGCACGGCAGTCTGCTTCTACTTT     >  SRR4302532.2689966/1‑94 (MQ=60)
                                                                                           CCGGCGTGCAGCACCTGCTTTACCCAGAACGCGCAGCATATGCTCAGCATTGCCAACTTCGCCCAGAGTTGCACGGCAGTCTGCTTCTACTTTA    <  SRR4302532.3464677/94‑1 (MQ=60)
                                                                                            CAGCGTGCAGCACCTGCTTTACCCAGAACGCGCAGCATATGCTCAGCATTGCCAACTTCGCCCAGAGTTGCACGGCAGTCTGCTTCTACTTTAC   >  SRR4302532.4080896/1‑94 (MQ=60)
                                                                                             GGCGTGCAGCACCTGCTTTACCCAGAACGCGCAGCATATGCTCAGCATTGCCAACTTCGCCCAGAGTTGCACGGCAGTCTGCTTCTACTTTACG  <  SRR4302532.67817/94‑1 (MQ=60)
                                                                                             GGCGTGCAGCACCTGCTGTACCCAGAACGCGCAGCATATGCTCAGCATTGCCAACTTCGCCCAGAGTTGCACGGCAGTCTGCTTCTACTTTACG  <  SRR4302532.2800927/94‑1 (MQ=60)
                                                                                             AGCGTGCAGCACCTGCTTTACCCAGAACGCGCAGCATATGCTCAGCATTGCCAACTTCGCCCAGAGTTGCACGGCAGTCTGCTTCTACTTTACG  >  SRR4302532.1844063/1‑94 (MQ=60)
                                                                                             |                                                                                             
GGTGCTTACCAAAGTTACGACCTTCACCACCACCATGTGGGTGGTCTACCGGGTTCATCGCGGTACCGCGAACGGTCGGACGAACACCACGCCAGCGTGCAGCACCTGCTTTACCCAGAACGCGCAGCATATGCTCAGCATTGCCAACTTCGCCCAGAGTTGCACGGCAGTCTGCTTCTACTTTACG  >  NC_000913/3448272‑3448458

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑