Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
521 |
238.2 |
12299412 |
96.0% |
11807435 |
93.0 |
Breseq alignment
N/A
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TTCACCACAATGGTCGGCGACATCGACGACAGCGGGCGTTTGTTCGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTACGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATTAAGCAGAATACCGCTCTCGCCCGCGACAATGCCCGTACCGAAGGTGGTGTTCA > NC_000913/3583043‑3583226
|
TTCACCACAATGGTCGGCGCCATCGACGACAGCGGGCTTTTGTTCGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTG < SRR4302532.4859177/94‑1 (MQ=60)
TTCACCACAATGGTCGGCGACATCGACGACAGCGGGCGTTTGTTCGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTG < SRR4302532.2971409/94‑1 (MQ=60)
TTCACCACAATGGTCGGCGACATCGACGACAGCGGGCGTTTGTTCGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTG < SRR4302532.2257641/94‑1 (MQ=60)
TTCACCACAATGGTCGGCGACATCGACGACAGCGGGCGTTTGTTCGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTA < SRR4302532.5091179/94‑1 (MQ=60)
TTCACCACAATGGTCGGCGACATCGACGACAGCGGGCGTTTGTTCGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTA < SRR4302532.3817192/94‑1 (MQ=60)
TCACCACAATGGTCGGCGACATCGACGGCAGCGGGCGTTTGTTCGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTGC < SRR4302532.1888077/94‑1 (MQ=60)
TCACCACAATGGTCGGCGACATCGACGACAGCGGGCGTTTGTTCGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTGC < SRR4302532.3464907/94‑1 (MQ=60)
TCACCACAATGGTCGGCGACATCGACGACAGCGGGCGTTTGTTCGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTAC < SRR4302532.6341725/94‑1 (MQ=60)
TCACCACAATGGTCGGCGACATCGACGACAGCGGGCGTTTGTTCGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTAC < SRR4302532.2713157/94‑1 (MQ=60)
TCACCACAATAGTCGGCGATATCGACGACAGCGGGCGTTTGTTCGTCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTAC < SRR4302532.880712/94‑1 (MQ=60)
ACCACAATGGTCGGCGACATCGACGACAGCGGGCGTTTGTTCGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTGCGC > SRR4302532.2293537/1‑94 (MQ=60)
CCACAATGGTCGGCGACATCGACGACAGCGGGCGTTTGTTCGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTGCGCC > SRR4302532.1634195/1‑94 (MQ=60)
CCACAATGGTCGGCGACATCGACGACAGCGGGCGTTTGTTCGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTGCGCC > SRR4302532.6299590/1‑94 (MQ=60)
CCACAATGGTCGGCGACATCGACGACAGCGGGCGTTTGTTCGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTCCGCC > SRR4302532.4951341/1‑94 (MQ=60)
CCACAATGGTCGGCGACATCGACGACAGCGGGCGTTTGTTCGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTACGCC > SRR4302532.1593067/1‑94 (MQ=60)
CACAATGGTCGGCGACATCGACGACAGCGGGCGTTTGTTCGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTGCGCCC < SRR4302532.4511271/94‑1 (MQ=60)
CACAATGGTCGGCGACATCGACGACAGCGGGCGTTTGTTCGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTACGCCC > SRR4302532.4558210/1‑94 (MQ=60)
CACAATGGTCGGCGACATCGACGACAGCGGGCGTTTGTTCGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTACGCCC < SRR4302532.5793883/94‑1 (MQ=60)
ACAATGGTCGGCGACATCGACGACAGCGGGCGTTTGTTCGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTGCGCCCG > SRR4302532.3611602/1‑94 (MQ=60)
CAATGGTCGGCGACATCGACGACAGCGGGCGTTTGTTCGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTGCGCCCGG < SRR4302532.4061573/94‑1 (MQ=60)
CAATGGTCGGCGACATCGACGACAGCGGGCGTTTGTTCGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTGCGCCCGG > SRR4302532.114454/1‑94 (MQ=60)
CAATGGTCGGCGACATCGACGACAGCGGGCGTTTGTTCGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTACGCCCGG > SRR4302532.2410151/1‑94 (MQ=60)
ATGGTCGGCGACATCGACGACAGCGGGCGTTTGTTCGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTACGCCCGGTT < SRR4302532.6012430/94‑1 (MQ=60)
ATGGTCGGCGACATCGACGACAGCGGGCGTTTGTTCGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTACGCCCGGTT > SRR4302532.1655479/1‑94 (MQ=60)
GGTCGGCGACATCGACGACAGCGGGCGTTTGTTCGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTGCGCCCGGTTTG < SRR4302532.2410575/94‑1 (MQ=60)
GGTCGGCGACATCGACGACAGCGGGCGTTTGTTCGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTGCGCCCGGTTTG > SRR4302532.2830652/1‑94 (MQ=60)
GGTCGGCGACATCGACGACAGCGGGCGTTTGTTCGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTACGCCCGGTTTG < SRR4302532.5031209/94‑1 (MQ=60)
GGTCGGCGACATCGACGACAGCGGGCGTTTGTTCGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTACGCCCGGTTTG < SRR4302532.3277387/94‑1 (MQ=60)
GTCGGCGACATCGACGACAGCGGGCGTTTGTTCGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTGCGCCCGGTTTGG < SRR4302532.1578121/94‑1 (MQ=60)
GTCGGCGACATCGACGACAGCGGGCGTTTGTTCGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTACGCCCGGTTTGG < SRR4302532.5816827/94‑1 (MQ=60)
GGCGGCGACATCGACGACAGCGGGCGTTTGTTCGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTACGCCCGGTTTGG < SRR4302532.5816825/94‑1 (MQ=60)
CGGCGACATCGACGACAGCGGGCGTTTGTTCGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTGCGCCCGGTTTGGCG < SRR4302532.671551/94‑1 (MQ=60)
GGCGACATCGACGACAGCGGTCGTTTGTTCGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTACGCCCGGTTTGGCGG < SRR4302532.323766/94‑1 (MQ=60)
GGCGACATCGACGACAGCGGGCGTTTGTTCGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTGCGCCCGGTTTGGCGG > SRR4302532.5055762/1‑94 (MQ=60)
GGCGACATCGACGACAGCGGGCGTTTGTTCGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTGCGCCCGCTTTGGCGG > SRR4302532.900295/1‑94 (MQ=60)
CGACATCGACGACATCGGGCGTTTGTTCAGCCCGACGGCCTTGGCAATACCTCCCACCAGCCCGTAAACGTTCGGGGCGCCCGGTTTAGCGGAG > SRR4302532.5788559/1‑94 (MQ=53)
CGACATCGACGACAGCGGGCGTTTGTTCGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTGCGCCCGGTTTGGCGGAG < SRR4302532.2850128/94‑1 (MQ=60)
CGACATCGACGACAGCGGGCGTTTGTTCGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTGCGCCCGGTTTGGCGGAG > SRR4302532.142230/1‑94 (MQ=60)
CGACATCGACGACAGCGGGCGTTTGTTCGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTACGCCCGGTTTGGCGGAG < SRR4302532.3203814/94‑1 (MQ=60)
CGACATCGACGACAGCGGGCGTTTGTTCGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTACGCCCGGTTTGGCGGAG < SRR4302532.6081231/94‑1 (MQ=60)
GACATCGACGACAGCGGGCGTTTGTTCGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTGCGCCCGGTTTGGCGGAGA > SRR4302532.2200837/1‑94 (MQ=60)
CATCGACGACAGCGGGCGTTTGTTCGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTGCGCCCGGTTTGGCGGAGAAA > SRR4302532.2392134/1‑94 (MQ=60)
ATCGACGACAGCGGGCGTTTGTTTGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTACGCCCGGTTTCGCGGAGAAAT > SRR4302532.4149423/1‑94 (MQ=60)
ATCGACGACAGCGGGCGTTTGTTCGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTACGCCCGGTTTGGCGGAGAAAT > SRR4302532.4666383/1‑94 (MQ=60)
ATCGACGACAGCGGGCGTTTGTTCGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTACGCCCGGTTTGGCGGAGAAAT > SRR4302532.6343670/1‑94 (MQ=60)
ATCGACGACAGCGGGCGTTTGTTCGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTACGCCCGGTTTGGCGGAGAAAT > SRR4302532.4190666/1‑94 (MQ=60)
ATCGACGACAGCGGGCGTTTGTTCGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTACGCCCGGTTTGGCGGAGAAAT > SRR4302532.6173392/1‑94 (MQ=60)
CGACGACAGCGGGCGTTTGTTCGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTGCGCCCGGTTTGGCGGAGAAATCA > SRR4302532.806408/1‑94 (MQ=60)
CGACGACAGCGGGCGTTTGTTCGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTACGCCCGGTTTGGCGGAGAAATCA > SRR4302532.432683/1‑94 (MQ=60)
GACAGCGGGCGTTTGTTCGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTGCGCCCGGTTTGGCGGAGAAATCATCCT > SRR4302532.3959174/1‑94 (MQ=60)
GACAGCGGGCGTTTGTTCGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTGCGCCCGGTTTGGCGGAGAAATCATCCA > SRR4302532.1351126/1‑94 (MQ=60)
GACAGCGGGCGTTTGTTCGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTACGCCCGGTTTGGCGGAGAAATCATCCA < SRR4302532.5655231/94‑1 (MQ=60)
GACAGCGGGCGTTTGTTCGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTACGCCCGGTTTGGCGGAGAAATCATCCA > SRR4302532.1561134/1‑94 (MQ=60)
GACAGCGGGCGTTTGTTCGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTACGCCCGGTTTGGCGGAGAAATCATCCA > SRR4302532.242887/1‑94 (MQ=60)
GCAGCGGGCGTTTGTTCGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTGCGCCCGGTTTGGCGGAGAAATCATCCAT < SRR4302532.2720814/94‑1 (MQ=60)
CAGCGGGCGTTTGTTCGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTGCGCCCGGTTTGGCGGAGAAATCATCCCTC < SRR4302532.4502940/94‑1 (MQ=60)
AGGGGGCGTTTGTTCGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTACGCCCGGTTTGGCGGAGAAATCATCCATCT < SRR4302532.5055003/94‑1 (MQ=60)
AGCGGGCGTTTGTTCGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTGCGCCCGGTTTGGCGGAGAAATCATCCATCT > SRR4302532.196749/1‑94 (MQ=60)
GCGGGCGTTTGTTCGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTGCGCCCGGTTTGGCGGAGAAATCATCCATCTG > SRR4302532.4269860/1‑94 (MQ=60)
CGGGCGTTTGTTCGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTGCGCCCGGTTTGGCGGAGAAATCATCCATCTGG > SRR4302532.2315156/1‑94 (MQ=60)
CGGGCGTTTGTTCGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTACGCCCGGTTTGGCGGAGAAATCATCCATCTGG < SRR4302532.6338341/94‑1 (MQ=60)
GGGCGTTTGTTCGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTGCGCCCGGTTTGGCGGAGAAATCATCCATCTGGT > SRR4302532.6081431/1‑94 (MQ=60)
GGGCGTTTGTTCGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTGCGCCCGGTTTGGCGGAGAAATCATCCATCTGGT > SRR4302532.3941671/1‑94 (MQ=60)
GGGCGTTTGTTCGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTGCGCCCGGTTTGGCGGAGAAATCATCCATCTGGT > SRR4302532.4877255/1‑94 (MQ=60)
GGGCGTTTGTTCGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTGCGCCCGGTTTGGCGGAGAAATCATCCATCTGGT < SRR4302532.3547776/94‑1 (MQ=60)
GGCGTTTGTTCGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTGCGCCCGGTTTGGCGGAGAAATCATCCATCTGGTT > SRR4302532.4319163/1‑94 (MQ=60)
GGCGTTTGTTCGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTGCGCCCGGTTTGGCGGAGAAATCATCCATCTGGTT > SRR4302532.1142610/1‑94 (MQ=60)
CGTTTGTTCGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTACGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTAT > SRR4302532.5415093/1‑94 (MQ=60)
CGTTTGTTCGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTACGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTAT > SRR4302532.836041/1‑94 (MQ=60)
GTTTGTTCGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTACGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATT < SRR4302532.3550378/94‑1 (MQ=60)
GTTTGTTCGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTACGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATT > SRR4302532.57706/1‑94 (MQ=60)
GTTTGTTCGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTACGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATT < SRR4302532.2271313/94‑1 (MQ=60)
TGTTCGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTGCGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATTAAG < SRR4302532.5335663/94‑1 (MQ=60)
TGTTCGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTGCGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATTAAG < SRR4302532.5830831/94‑1 (MQ=60)
TGTTCGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTGCGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATTAAG < SRR4302532.6212388/94‑1 (MQ=60)
TGTTCGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTGCGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATTAAG > SRR4302532.1673990/1‑94 (MQ=60)
TGTTCGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTGCGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATTAAG < SRR4302532.1368287/94‑1 (MQ=60)
GTTCGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTACGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATTAAGC > SRR4302532.2461719/1‑94 (MQ=60)
GTTCGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTACGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATTAAGC > SRR4302532.3915155/1‑94 (MQ=60)
TTCGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTGCGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATTAAGCA < SRR4302532.3925845/94‑1 (MQ=60)
TTCGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTACGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATTAAGCA > SRR4302532.44567/1‑94 (MQ=60)
TCGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTACGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATTAAGCAG > SRR4302532.560814/1‑94 (MQ=60)
CGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTGCGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATTAAGCAGA < SRR4302532.1736891/94‑1 (MQ=60)
CGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTACGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATTAAGCAGA < SRR4302532.4888454/94‑1 (MQ=60)
GGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTGCGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATTAAGCAGAA < SRR4302532.3057937/94‑1 (MQ=60)
GGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTACGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATTAAGCAGAA > SRR4302532.4611939/1‑94 (MQ=60)
GCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTACGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATTAAGCAGAAT < SRR4302532.5573201/94‑1 (MQ=60)
CCCGACGGCGTTGGCATCGCCGCCCACCAGCCCGTAAACGTTCGGTGCGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATTAAGCAGAATA < SRR4302532.2760258/94‑1 (MQ=60)
CCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTGCGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATTAAGCAGAATA < SRR4302532.431724/94‑1 (MQ=60)
CCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTGCGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATTAAGCAGAATA < SRR4302532.3829582/94‑1 (MQ=60)
CCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTGCGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATTAAGCAGAATA < SRR4302532.4535117/94‑1 (MQ=60)
CCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTGCGCCCGGGTTGGCGGAGAAATCATCCATCTGGTTATTAAGCAGAATA > SRR4302532.1055176/1‑94 (MQ=60)
CCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTGCGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATTAAGCAGAATAC > SRR4302532.1945876/1‑94 (MQ=60)
CCGACGGCATTTGCATCACCGCCCACCAGCCCGTAAACGTTCGGTGCGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATTAAGCAGAATAC < SRR4302532.1774693/94‑1 (MQ=60)
CGAGGGCGTTGGCATCACCGCCCAACAGCCAATAAACGTTCGGTGCGCCCGGTTTGACGGAGAAATCATCCACCTGGTTATTAAGCAGAATACC < SRR4302532.335956/94‑1 (MQ=60)
CGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTACGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATTAAGCAGAATACC < SRR4302532.429392/94‑1 (MQ=60)
GACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTGCGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATTAAGCAGAATACCG > SRR4302532.5009640/1‑94 (MQ=60)
GACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTGCGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATTAAGCAGAATACCG > SRR4302532.4746170/1‑94 (MQ=60)
GACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTACGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATTAAGCAGAATACCG < SRR4302532.5238320/94‑1 (MQ=60)
CGGCGTTGGCATCCCCGCCCACCAGCCGGTAAACGTTCGGTACGCCCGGTTTGGCGGAGAAATCATCCATCGGGTTATTAAGCAGAATACCGCT < SRR4302532.2802846/94‑1 (MQ=60)
CGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTGCGCCCGGTTTGGCGGAGAAATCATCCTTCTGGTTATTAAGCAGAATACCGCT > SRR4302532.120950/1‑94 (MQ=60)
GGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTACGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATTAAGCAGAATACCGCTC > SRR4302532.4414919/1‑94 (MQ=60)
GGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTACGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATTAAGCAGAATACCGCTC > SRR4302532.405608/1‑94 (MQ=60)
GCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTACGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATTAAGCAGAATACCGCTCT < SRR4302532.1604209/94‑1 (MQ=60)
GCGTTGGCATCACCGCCCACCAGCCAGTAAACGTTCGGTACGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATTAAGCAGAATACCGCTCT < SRR4302532.2022113/94‑1 (MQ=60)
CGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTGCGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATTAAGCAGAATACCGCTCTC > SRR4302532.1988089/1‑94 (MQ=60)
CGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTACGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATTAAGCAGAATACCGCTCTC < SRR4302532.3169351/94‑1 (MQ=60)
GTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTACGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATTAAGCAGAATACCGCTCTCG > SRR4302532.2363891/1‑94 (MQ=60)
TTGCCATCCCCGCCCACCAGCCCGTAAACGTTCGGTACGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATTAAGCAGAATACCGCTCTCGC < SRR4302532.683449/94‑1 (MQ=60)
TGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTGCGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATTAAGCAGAATACCGCTCTCGCC < SRR4302532.2341478/94‑1 (MQ=60)
GGCATCACCGCCCACCAGCCCGTAAACGTTCGGTGCGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATTAAGCAGAATACCGCTCTCGCCC < SRR4302532.3968576/94‑1 (MQ=60)
GGCATCACCGCCCACCAGCCCGTAAACGTTCGGTGCGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATTAAGCAGAATACCGCTCTCGCCC < SRR4302532.1539466/94‑1 (MQ=60)
GGCATCACCGCCCACCAGCCCGTAAACGTTCGGTGCGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTACTAAGCAGAATACCGCTCTCGCCC > SRR4302532.344770/1‑94 (MQ=60)
CATCACCGCCCACCAGCCCGTAAACGTTCGGTACGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATTAAGCAGAATACCGCTCTCGCCCGC > SRR4302532.3682673/1‑94 (MQ=60)
ATCACCGCCCACCAGCCCGTCAACGTTCGGTACGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATTCAGCAGAATACCGCTCTCGCCCGCG > SRR4302532.4216405/1‑94 (MQ=60)
ATCACCGCCCACCAGCCCGTAAACGTTCGGTGCGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATTAAGCAGAATACCGCTCTCGCCCGCG > SRR4302532.492980/1‑94 (MQ=60)
CACCGCCCACCAGCCCGTAAACGTTCGGTGCGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATTAAGCAGAATACCGCTCTCGCCCGCGAC > SRR4302532.1405424/1‑94 (MQ=60)
CCCGCCCACCAGCCCGTAAACGTTCGGTGCGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATTAAGCAGAATACCGCTCTCGCCCGCGACA < SRR4302532.1833554/94‑1 (MQ=60)
ACCGCCCACCAGCCCGTAAACGTTCGGTGCGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATTAAGCAGAATACCGCTCTCGCCCGCGACA < SRR4302532.2503844/94‑1 (MQ=60)
ACCGCCCACCAGCCCGTAAACGTTCGGTACGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATTAAGCAGAATACCGCTCTCGCCCGCGACA > SRR4302532.4852061/1‑94 (MQ=60)
CCGCCCACCAGCCCGTAAACGTTCGGTGCGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATTAAGCATAATACCGCTCTCGCCCGCGACAA > SRR4302532.3664059/1‑94 (MQ=60)
CGCCCACCAGCCGGTAAACGTTCGGTACGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATTAAGCAGAATACCGCTCTCGCCCGCGACAAT < SRR4302532.3822028/94‑1 (MQ=60)
CGCCCACCAGCCCGTAAACGTTCGGTACGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATTAAGCAGAATACCGCTCTCGCCCGCGACAAT < SRR4302532.1481127/94‑1 (MQ=60)
CGCCCACCAGCCAGTAAGCGTTCGGTACGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATTAAGCAGAATACCGCTCTCGCCCGCGACACT < SRR4302532.5673957/94‑1 (MQ=60)
GCCCACCAGCCCGTAAACGTTCGGTGCGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATTAAGCAGAATACCGCTCTCGCCCGCGACAATG < SRR4302532.2250723/94‑1 (MQ=60)
GCCCACCAGCCCGTAAACGTTCGGTGCGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATTAAGCAGAATACCGCTCTCGCCCGCGACAATG > SRR4302532.3587465/1‑94 (MQ=60)
CCCACCAGCCCGTCAACGTTCGGTGCGCCCGGTTTGGCGGAGGAATCATCCATCTGGTTATTAAGCAGAATACAGCTATCGCCCGCGACCATGC > SRR4302532.2465926/1‑94 (MQ=60)
CCCACCAGCCCGTAAACGTTCGGTGCGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATTAAGCAGAATACCGCTCTCGCCCGCGACAATGC < SRR4302532.706302/94‑1 (MQ=60)
CCCACCAGCCCGTAAACGTTCGGTACGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATTAAGCAGAATACCGCTCTCGCCCGCGACAATGC < SRR4302532.5888367/94‑1 (MQ=60)
CCACCAGCCCGTAAACGTTCGGTGCGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATTAAGCAGAATACCGCTCTCGCCCGCGACAATGCC > SRR4302532.4499593/1‑94 (MQ=60)
CGCCAGCCCGTAAACGTTCGGTGCGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATTAAGCAGAATACCGCTCTCGCCCGCGACAATGCCC < SRR4302532.1555205/94‑1 (MQ=60)
CACCAGCCCGTAAACGTTCGGTACGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATTAAGCAGAATACCGCTCTCGCCCGCGACAATGCCC < SRR4302532.3890804/94‑1 (MQ=60)
CACCAGCCCGTAAACGTTCGGTACGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATTAAGCAGAATACCGCTCTCGCCCGCGACAATGCCC > SRR4302532.3551135/1‑94 (MQ=60)
ACCAGCCCGTAAACGTTCGGTGCGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATTAAGCAGAATACCGCTCTCGCCCGCGACAATGCCCG < SRR4302532.5900776/94‑1 (MQ=60)
CCAGCCCGTAAACGTTCGGTGCGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATTAAGCAGAATACCGCTCTCGCCCGCGACAATGCCCGT < SRR4302532.332467/94‑1 (MQ=60)
AGCCCGTAAACGTTCGGTGCGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATTAAGCAGAATACCGCTCTCGCCCGCGACAATGCCCGCAC < SRR4302532.835789/94‑1 (MQ=60)
CCCGTAAACGTTCGGTGCGCCCGGTTTGGCGGAGAAATCATCCATCTGGGTATTAAGCAGAATACCGCTCTCGCCCGCGACAATGCCCGTACCG > SRR4302532.5629244/1‑94 (MQ=60)
CCGTAAACGTTCGGTGCGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATTAAGCAGAATACCGCTCTCGCCCGCGACAATGCCCGTACCGA > SRR4302532.4466651/1‑94 (MQ=60)
CGTAAACGTTCGGTACGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATTAAGCAGAATACCGCTCTCGCCCGCGACAATGCCCGTACCGAA > SRR4302532.2254364/1‑94 (MQ=60)
CGTAAACGTTCGGTACGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATTAAGCAGAATACCGCTCTCGCCCGCGACAATGCCCGTACCGAA < SRR4302532.2734491/94‑1 (MQ=60)
GTAAACGTTCGGTGCGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATTAAGCAGAATACCGCTCTCGCCCGCGACAATGCCCGTACCGAAG > SRR4302532.5950075/1‑94 (MQ=60)
GTAAACGTTCGGTACGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATTAAGCAGAATACCGCTCTCGCCCGCGACAATGCCCGTACCGAAG > SRR4302532.879755/1‑94 (MQ=60)
GTAAACGTTCGGTACGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATTAAGCAGAATACCGCTCTCGCCCGCGACAATGCCCGTACCGAAG < SRR4302532.3215499/94‑1 (MQ=60)
TAAACGTTCGGTGCGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATTAAGCAGAATACCGCTCTCGCCCGCGACAATGCCCGTACCGAAGG < SRR4302532.4683697/94‑1 (MQ=60)
TAAACGTTCGGTACGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATTAAGCAGAATACCGCTCTCGCCAGCGACAATGCCCGTACCGAAGG < SRR4302532.3512216/94‑1 (MQ=60)
AAACGTTCGGTGCGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATTAAGCAGAATACCGCTCTCGCCCGCGACAATGCCCGTACCGAAGGT < SRR4302532.2520300/94‑1 (MQ=60)
AAACGTTCGGTACGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATTAAGCAGAATACCGCTCTCGCCCGCGACAAcgcttgcaccgaatgg > SRR4302532.5679122/1‑78 (MQ=60)
AACGTTCGGTACGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATTAAGCAGAATACCGCTCTCGCCCGCGACAATGCCCGTACCGAAGGTG > SRR4302532.1145814/1‑94 (MQ=60)
AACGTTAGGTCCGCCTGGTTTGGCGGAGAAATCATCCATCTGGTTATTAAGCAGAATACCGCTCTCGCCCGCGACAATACTCGTACCGAAGGTG < SRR4302532.5350560/94‑1 (MQ=60)
ACGTTCGGTGCGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATTAAGCAGAATACCGCTCTCGCCCGCGCCAATGCCCGTACCGAAGGTGG > SRR4302532.4752963/1‑94 (MQ=60)
ACGTTCGGTGCGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATTAAGCAGAATACCGCTCTCGCCCGCGACAATGCCCGTACCGAAGGTGG < SRR4302532.4474999/94‑1 (MQ=60)
ACGTTCGGTACGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATTAAGCAGAATACCGCTCTCGCCCGCGACAATGCCCGTACCGAAGGTGG < SRR4302532.975413/94‑1 (MQ=60)
CGTTCGGTACGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATTAAGCAGAATACCGCTCTCGCCCGCGACAATGCCCGTACCGAAGGTGGT < SRR4302532.5231777/94‑1 (MQ=60)
CGTTCGGTACGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATTAAGCAGAATACCGCTCTCGCCCGCGACAATGCCCGTACCGAAGGTGGT < SRR4302532.3088996/94‑1 (MQ=60)
CGTTCGGTACGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATTAAGCAGAATACCGCTCTCGCCCGCGACAATGCCCGTACCGAAGGTGGG > SRR4302532.4032081/1‑94 (MQ=60)
GTTCGGTACGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATTAAGCAGAATACCGCTCTCGCCCGCGACAATGCCCGTACCGAAGGTGGTG < SRR4302532.1928235/94‑1 (MQ=60)
TTCGGTACGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATTAAGCAGAATACCGCTCTCGCCCGCGACAATGCCCGTACCGAAGGTGGTGT < SRR4302532.757092/94‑1 (MQ=60)
TTCGGTACGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATTAAGCAGAATACCGCTCTCGCCCGCGACAATGCCCGTACCGAAGGTGGTGT < SRR4302532.2915516/94‑1 (MQ=60)
TCGGTGCGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATTAAGCAGAATACCGCTCTCGCCCGCGACAATGCCCGTACCGAAGGTGGTGTT < SRR4302532.5908808/94‑1 (MQ=60)
CGGTACGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATTAAGCAGAATACCGCTCTCGCCCGCGACAATGCCCGTACCGAAGGTGGTGTTC > SRR4302532.2243189/1‑94 (MQ=60)
GGTACGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATTAAGCAGAATACCGCTCTCGCCCGCGACAATGCCCGTACCGAAGGTGGTGTTCA < SRR4302532.1972386/94‑1 (MQ=60)
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TTCACCACAATGGTCGGCGACATCGACGACAGCGGGCGTTTGTTCGGCCCGACGGCGTTGGCATCACCGCCCACCAGCCCGTAAACGTTCGGTACGCCCGGTTTGGCGGAGAAATCATCCATCTGGTTATTAAGCAGAATACCGCTCTCGCCCGCGACAATGCCCGTACCGAAGGTGGTGTTCA > NC_000913/3583043‑3583226
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
