Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 521 238.2 12299412 96.0% 11807435 93.0

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output
TCCTCCTGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGTGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCGCCGCC  >  NC_000913/3665494‑3665679
                                                                                            |                                                                                             
TCCTCCTGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCG                                                                                              <  SRR4302532.908561/94‑1 (MQ=60)
 CCTCCTGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGC                                                                                             >  SRR4302532.1860521/1‑94 (MQ=60)
 CCTCCTGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGC                                                                                             >  SRR4302532.1341904/1‑94 (MQ=60)
 CCTCCTGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGC                                                                                             >  SRR4302532.5735336/1‑94 (MQ=60)
  CTCCTGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGTGCC                                                                                            >  SRR4302532.84394/1‑94 (MQ=60)
  CTCCTGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCC                                                                                            >  SRR4302532.858887/1‑94 (MQ=60)
    CCTGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGGACGGGGCCGT                                                                                          >  SRR4302532.926788/1‑94 (MQ=60)
        CGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGTGCCGTTAAA                                                                                      >  SRR4302532.3345467/1‑94 (MQ=60)
         GGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAG                                                                                     >  SRR4302532.595505/1‑94 (MQ=60)
          GCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGTGCCGTTAAAGC                                                                                    >  SRR4302532.5935309/1‑94 (MQ=60)
           CAGCTCTTTGCCTGCCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGACACCGCGATGGAAGTACGGCGCCGTTAAAGCA                                                                                   <  SRR4302532.5861589/94‑1 (MQ=60)
            AGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGTGCCGTTAAAGCAA                                                                                  >  SRR4302532.5943821/1‑94 (MQ=60)
            AGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGTGCCGTTAAAGCAA                                                                                  >  SRR4302532.6259837/1‑94 (MQ=60)
             GCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAAC                                                                                 <  SRR4302532.1114171/94‑1 (MQ=60)
              CTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGTGCCGTTAAAGCAACG                                                                                >  SRR4302532.763090/1‑94 (MQ=60)
               TCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGT                                                                               >  SRR4302532.1600173/1‑94 (MQ=60)
                    GCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGT                                                                          >  SRR4302532.2010637/1‑94 (MQ=60)
                      CTACCTGATAGCGCAGCGTCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAA                                                                        >  SRR4302532.6060239/1‑94 (MQ=60)
                       TACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAA                                                                       >  SRR4302532.6015363/1‑94 (MQ=60)
                         CCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGTGCCGTTAAAGCAACGTTACGTAAACC                                                                     >  SRR4302532.5987750/1‑94 (MQ=60)
                         CCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACC                                                                     >  SRR4302532.459680/1‑94 (MQ=60)
                          CTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGTGCCGTTAAAGCAACGTTACGTAAACCG                                                                    >  SRR4302532.5692215/1‑94 (MQ=60)
                          CTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGTGCCGTTAAAGCAACGTTACGTAAACCG                                                                    >  SRR4302532.1906047/1‑94 (MQ=60)
                          CTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCG                                                                    >  SRR4302532.994166/1‑94 (MQ=60)
                          CTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGATAAAGCAACGTTACGTAAACCG                                                                    >  SRR4302532.2665714/1‑94 (MQ=60)
                           TGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGTGCCGTTAAAGCAACGTTACGTAAACCGG                                                                   <  SRR4302532.1283182/94‑1 (MQ=60)
                           TGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGG                                                                   >  SRR4302532.4654897/1‑94 (MQ=60)
                            GATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGTGCCGTTAAAGCAACGTTACGTAAACCGGG                                                                  >  SRR4302532.4241485/1‑94 (MQ=60)
                               AGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGGGCCGTTAAAGCAACGTTACGTAAACCGGGTAC                                                               >  SRR4302532.4962570/1‑94 (MQ=60)
                               AGCGCACCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTAC                                                               <  SRR4302532.6356709/94‑1 (MQ=60)
                                GCGCAGCATCAGTTTCCCCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACT                                                              <  SRR4302532.941530/94‑1 (MQ=60)
                                  GCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGTGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTT                                                            <  SRR4302532.4653212/94‑1 (MQ=60)
                                   CAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGTGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTC                                                           >  SRR4302532.2032905/1‑94 (MQ=60)
                                   CAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGTGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTC                                                           >  SRR4302532.3273894/1‑94 (MQ=60)
                                   CAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGGGCCGTTAAAGCAACGTTACGTAAAACGGGTACTTTC                                                           >  SRR4302532.4767670/1‑94 (MQ=60)
                                   CAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTC                                                           >  SRR4302532.5207522/1‑94 (MQ=60)
                                     GCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGTGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTG                                                         <  SRR4302532.5225442/94‑1 (MQ=60)
                                     GCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTG                                                         <  SRR4302532.6062535/94‑1 (MQ=60)
                                      CATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGTGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGA                                                        <  SRR4302532.1891797/94‑1 (MQ=60)
                                       ATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGAC                                                       <  SRR4302532.6236893/94‑1 (MQ=60)
                                          AGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCA                                                    >  SRR4302532.1682110/1‑94 (MQ=60)
                                          AGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCA                                                    >  SRR4302532.1695049/1‑94 (MQ=60)
                                           GTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGTGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAA                                                   >  SRR4302532.4816356/1‑94 (MQ=60)
                                           GTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGTGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAA                                                   >  SRR4302532.3861532/1‑94 (MQ=60)
                                           GTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAA                                                   <  SRR4302532.1456596/94‑1 (MQ=60)
                                             TTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATT                                                 <  SRR4302532.6056190/94‑1 (MQ=60)
                                               CACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTA                                               >  SRR4302532.3091008/1‑94 (MQ=60)
                                               CACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTA                                               <  SRR4302532.1714063/94‑1 (MQ=60)
                                                ACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTAT                                              <  SRR4302532.3323259/94‑1 (MQ=60)
                                                   GCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCAC                                           >  SRR4302532.1131542/1‑94 (MQ=60)
                                                    CCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGTGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACG                                          <  SRR4302532.5574198/94‑1 (MQ=60)
                                                    CCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGTGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACG                                          <  SRR4302532.5959192/94‑1 (MQ=60)
                                                    CCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACG                                          >  SRR4302532.5246488/1‑94 (MQ=60)
                                                     CCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGTGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATAACGC                                         >  SRR4302532.1655658/1‑94 (MQ=60)
                                                      CCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCT                                        <  SRR4302532.1431597/94‑1 (MQ=60)
                                                       CGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTT                                       >  SRR4302532.5236627/1‑94 (MQ=60)
                                                       CGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTC                                       <  SRR4302532.4737533/94‑1 (MQ=60)
                                                       CGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTC                                       >  SRR4302532.4181217/1‑94 (MQ=60)
                                                       CGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTC                                       >  SRR4302532.1940099/1‑94 (MQ=60)
                                                        GTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGTGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCT                                      >  SRR4302532.2844771/1‑94 (MQ=60)
                                                            AGCGTCGGCACGTCACCGCGATGGAAGTACGGTGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCCATTTATCACGCTTTTCTT                                  >  SRR4302532.4665121/1‑94 (MQ=60)
                                                            AGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTT                                  >  SRR4302532.1546435/1‑94 (MQ=60)
                                                             GCGTCGGCACGTCACCGCGATGGAAGTACGGTGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTT                                 <  SRR4302532.3633395/94‑1 (MQ=60)
                                                             GCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTT                                 >  SRR4302532.4316830/1‑94 (MQ=60)
                                                              CGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTA                                <  SRR4302532.2944357/94‑1 (MQ=60)
                                                               GTCGGCACGTCACCGCGATGGAAGTACGGTGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAG                               <  SRR4302532.669147/94‑1 (MQ=60)
                                                               GTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAG                               >  SRR4302532.1050935/1‑94 (MQ=60)
                                                               GTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAG                               <  SRR4302532.972714/94‑1 (MQ=60)
                                                                TCGGCACGTCACCGCGATGGAAGTACGGTGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGT                              >  SRR4302532.1723757/1‑94 (MQ=60)
                                                                TCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGT                              <  SRR4302532.4024410/94‑1 (MQ=60)
                                                                 CGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTC                             >  SRR4302532.2543883/1‑94 (MQ=60)
                                                                 CGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTC                             >  SRR4302532.2543882/1‑94 (MQ=60)
                                                                  GGCACGTCACCGCGATGGAAGTACGGTGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCA                            <  SRR4302532.420171/94‑1 (MQ=60)
                                                                  GGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCA                            <  SRR4302532.5882710/94‑1 (MQ=60)
                                                                    CACGTCACCGCGATGGAAGTACGGTGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACA                          >  SRR4302532.5135410/1‑94 (MQ=60)
                                                                       GTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTC                       >  SRR4302532.441305/1‑94 (MQ=60)
                                                                        TCACCGCGATGGAAGTACGGTGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCA                      <  SRR4302532.5341822/94‑1 (MQ=60)
                                                                        TCACCGCGATGGAAGTACGGTGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCA                      <  SRR4302532.4570341/94‑1 (MQ=60)
                                                                         CACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCAT                     >  SRR4302532.3314209/1‑94 (MQ=60)
                                                                         CACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCAT                     <  SRR4302532.687072/94‑1 (MQ=60)
                                                                          ACCGCGATGGAAGTACGGTGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATA                    >  SRR4302532.1858203/1‑94 (MQ=60)
                                                                          ACCGCGATGGAAGTACGGTGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATA                    >  SRR4302532.4470296/1‑94 (MQ=60)
                                                                           CCGCGATGTAAGTACGGTGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATAC                   <  SRR4302532.314760/94‑1 (MQ=60)
                                                                           CCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATAC                   <  SRR4302532.4862193/94‑1 (MQ=60)
                                                                            CGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACG                  <  SRR4302532.5466008/94‑1 (MQ=60)
                                                                            CGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACG                  >  SRR4302532.1535816/1‑94 (MQ=60)
                                                                              CGATGGAAGTACGGTGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGAC                >  SRR4302532.4263231/1‑94 (MQ=60)
                                                                               GATGGAAGTACGGTGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACC               <  SRR4302532.2690203/94‑1 (MQ=60)
                                                                               GATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACC               >  SRR4302532.6171591/1‑94 (MQ=60)
                                                                                 TGGAAGTACGGTGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAA             >  SRR4302532.121067/1‑94 (MQ=60)
                                                                                 TGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAA             >  SRR4302532.1074350/1‑94 (MQ=60)
                                                                                   GAAGTACGGTGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATA           <  SRR4302532.5096148/94‑1 (MQ=60)
                                                                                   GAAGTACGGTGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATA           <  SRR4302532.3667288/94‑1 (MQ=60)
                                                                                   GAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATA           <  SRR4302532.2560244/94‑1 (MQ=60)
                                                                                    AAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATAT          >  SRR4302532.2376554/1‑94 (MQ=60)
                                                                                     AGTACGGTGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATC         >  SRR4302532.5539317/1‑94 (MQ=60)
                                                                                     AGTACGGTGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATC         <  SRR4302532.4426058/94‑1 (MQ=60)
                                                                                     AGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATC         <  SRR4302532.1135567/94‑1 (MQ=60)
                                                                                       TACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCG       <  SRR4302532.4584423/94‑1 (MQ=60)
                                                                                        ACGGTGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCGC      >  SRR4302532.1785943/1‑94 (MQ=60)
                                                                                         CGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCGCC     <  SRR4302532.4687395/94‑1 (MQ=60)
                                                                                          GGTGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCGCCG    >  SRR4302532.3157138/1‑94 (MQ=60)
                                                                                            CGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCGCCGCC  <  SRR4302532.4672328/94‑1 (MQ=60)
                                                                                            |                                                                                             
TCCTCCTGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGTGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCGCCGCC  >  NC_000913/3665494‑3665679

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑