Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
521 |
238.2 |
12299412 |
96.0% |
11807435 |
93.0 |
Breseq alignment
N/A
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CCGAACTGAAACTGGGCATTGACCGTATCGCCGCGATCCACCTGAAAGACACCCAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGTGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGCATCTTCAAAACGCTGCATAAACTGAACTATCGCGGTTCTTTCCTGATTGAGATGTGG > NC_000913/3747448‑3747632
|
CCGAACTGAAACTGGGCATTGACCGTATCGCCGCGATCCACCTGAAAGACACCCAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGT < SRR4302532.1450503/94‑1 (MQ=60)
CCGAACTGAAACTGGGCATTGACCGTATCGCCGCGATCCACCTGAAAGACACCCAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGC > SRR4302532.6194906/1‑94 (MQ=60)
CGAACTGAAACTGGGCATTGACCGTATCGCCGCGATCCACCTGAAAGACACCCAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGTG < SRR4302532.3339141/94‑1 (MQ=60)
CGAACTGAAACTGGGCATTGACCGTATCGCCGCGATCCACCTGAAAGACACCCAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGTG > SRR4302532.1741158/1‑94 (MQ=60)
GAACTGAAACTGGGCATTGACCGTATCGCCGCGATCCACCTGAAAGACACCCAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGTGC > SRR4302532.5917464/1‑94 (MQ=60)
GAACTGAAACTGGGCATTGACCGTATCGCCGCGATCCACCTGAAAGACACCCAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGTGC > SRR4302532.2780841/1‑94 (MQ=60)
GAACTGAAACTGGGCATTGACCGTATCGCCGCGATCCACCTGAAAGACACCCAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGCGC > SRR4302532.5401982/1‑94 (MQ=60)
CAACTGAAACTGGGCATTGACAGTAACGGCGAGATCCACCTGAAAGACACCCAGACAGTCACGGGCCAAAGTCCCAGCCAGTTGCGCGACGAGC > SRR4302532.2780842/1‑94 (MQ=34)
AACTGAAACTGGGCATTGACCGTATCGCCGCGATCCACCTGAAAGACACCCAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGTGCC > SRR4302532.4570574/1‑94 (MQ=60)
AACTGAAACTGGGCATTGACCGTATCGCCGCGATCCACCTGAAAGACACCCAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGCGCC > SRR4302532.3805155/1‑94 (MQ=60)
AACTGAAACTGGGCATTGACCGTATCGCCGCGATCCACCTGAAAGACACCCAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGCGCC > SRR4302532.5979053/1‑94 (MQ=60)
ACTGAAACTGGGCATTGACCGTATCGCCGCGATCCACCTGAAAGACACCCAGCCAGTCACCGGGCAAAGTCCCGGCCAGTTCCGCGACGCGCCG > SRR4302532.5298332/1‑94 (MQ=60)
ACTGAAACTGGGCATTGACCGTATCGCCGCGATCCACCTGAAAGACACCCAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGAGACGTGCCG > SRR4302532.4207040/1‑94 (MQ=60)
CTGAAACTGGGCATTGACCGTATCGCCGCGATCCACCTGAAAGACACCCAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGCGCCGT > SRR4302532.1093053/1‑94 (MQ=60)
TGAAACTAGGCATTGACCGTATCGCCGCGATCCACCTGAAAGACACCCAGCCAGTCACCGGGCAAAGTCCCGGACAGTCCCGCGGCGCGCCGTT > SRR4302532.3771654/1‑94 (MQ=60)
AAACTGGGCATTGACCGTATCGCCGCGATCCACCTGAAAGACACCCAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGTGCCGTTTG > SRR4302532.2672854/1‑94 (MQ=60)
AAACTGGGCATTGACCGTATCGCCGCGATCCACCTGAAAGACACCCAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGCGCCGTTTG > SRR4302532.4246307/1‑94 (MQ=60)
AAACTGGGCATTGACCGTATCGCCGCGATCCACCTGAAAGACACCCAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGCGCCGTTTG > SRR4302532.62665/1‑94 (MQ=60)
AAACTGGGCATTGACCGTATCGCCGCGATCCACCTGAAAGACACCCAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGCGCCGTTTG > SRR4302532.62664/1‑94 (MQ=60)
AACTGGGCATTGACCGTATCGCCGCGATCCACCTGAAAGACACCCAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGTGCCGTTTGG < SRR4302532.6020595/94‑1 (MQ=60)
AACTGGGCATTGACCGTATCGCCGCGATCCACCTGAAAGACACCCAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGCGCCGTTTGG > SRR4302532.5983736/1‑94 (MQ=60)
CTGGGCATTGACCGTATCGCCGCGATCCACCTGAAAGACACCCAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGCGCCGTTTGGCG > SRR4302532.3089723/1‑94 (MQ=60)
CTGGGCATTGACCGTATCGCCGCGATCCACCTGAAAGACACCCAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGCGCCGTTTGGCG > SRR4302532.5809189/1‑94 (MQ=60)
TGGGCATTGACCGTATCGCCGCGATCCACCTGAAAGACACCCAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGCGCCGTTTGGCGA > SRR4302532.6296122/1‑94 (MQ=60)
GGGCATTGACCGTATCGCCGCGATCCACCTGAAAGACACCCAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGCGCCGTTTGGCGAA > SRR4302532.5082975/1‑94 (MQ=60)
GGCATTGCCCGTATCGCCGCGACCCACCTGAAACACACCCAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGCGCCGTTTGGCGAAG < SRR4302532.5911876/94‑1 (MQ=60)
GGCATTGACCGTATCGCCGCGATCCACCTGAAAGACACCCAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGTGCCGTTTGGCGAAG > SRR4302532.2162064/1‑94 (MQ=60)
GGCATTGACCGTATCGCCGCGATCCACCTGAAAGACACCCAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGCGCCGTTTGGCGAAG < SRR4302532.1348643/94‑1 (MQ=60)
GCATTGACCGTATCGCCGCGATCCACCTGAAAGACACCCAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGTGCCGTTTGGCGAAGG < SRR4302532.5854004/94‑1 (MQ=60)
GCATTGACCGTATCGCCGCGATCCACCTGAAAGACACCCAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGCGCCGTTTGGCGAAGG > SRR4302532.1324298/1‑94 (MQ=60)
gaattgacgttatccccgcgatCACCTGAAAGACACCCAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGCGCCGTTTGGCGAAGGC < SRR4302532.116095/72‑1 (MQ=60)
ATTGACCGTATCGCCGCGATCCACCTGAAAGACACCCAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGTGCCGTTTGGCGAAGGCT > SRR4302532.2616844/1‑94 (MQ=60)
ATTGACCGTATCGCCGCGATCCACCTGAAAGACACCCAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGCGCCGTTTGGCGAAGGCT > SRR4302532.2805230/1‑94 (MQ=60)
ATTGACCGTATCGCCGCGATCCACCTGAAAGACACCCAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGCGCCGTTTGGCGAAGGCT > SRR4302532.2335305/1‑94 (MQ=60)
ATTGACCGTATCGCCGCGATCCACCTGAAAGACACCCAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGCGCCGTTTGGCGAAGGCT > SRR4302532.3200316/1‑94 (MQ=60)
TGACCGTATCGCCGCGATCCACCTGAAAGACACCCAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGTGCCGTTTGGCGAAGGCTGC > SRR4302532.3504668/1‑94 (MQ=60)
TGACCGTATCGCCGCGATCCACCTGAAAGACACCCAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGCGCCGTTTGGCGAAGGCTGC < SRR4302532.3806776/94‑1 (MQ=60)
GACCGTATCGCCGCGATCCACCTGAAAGACACCCAGCCAGTCACCGGGCAAAGTCCCGGACATTTCCGCGACGTGCCGTTTGGCGAAGGCTGCG > SRR4302532.1465805/1‑94 (MQ=60)
GACCGTATCGCCGCGATCCACCTGAAAGACACCCAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGCGCTGTTTGGCGAAGGCTGCG > SRR4302532.5678767/1‑94 (MQ=60)
GACCGTATCGCCGCGATCCACCTGAAAGACACCCAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGCGCCGTTTGGCGAAGGCTGCG > SRR4302532.4627951/1‑94 (MQ=60)
ACCGTATCGCCGCGATCCACCTGAAAGACACCCAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGCGCCGTTTGGCGAAGGCTGCGT < SRR4302532.5831493/94‑1 (MQ=60)
CCGTATCGCCGCGATCCACCTGAAAGACACCCAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGCGCCGTTTGGCGAAGGTCGCGTC > SRR4302532.4607039/1‑94 (MQ=60)
CCGTATCGCCGCGATCCACCTGAAAGACACCCAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGCGCCGTTTGGCGAAGGCTGCGTC > SRR4302532.4982098/1‑94 (MQ=60)
CCGTATCGCCGCGATCCACCTGAAAGACACCCAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGCGCCGTTTGGCGAAGGCTGCGTC > SRR4302532.5975424/1‑94 (MQ=60)
CGTATCGCCGCGATCCACCTGAAAGACACCCAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGTGCCGTTTGGCGAAGGCTGCGTCG > SRR4302532.5745843/1‑94 (MQ=60)
CGTATCGCCGCGATCCACCTGAAAGACACCCAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGTGCCGTTTGGCGAAGGCTGCGTCG > SRR4302532.2272283/1‑94 (MQ=60)
CGTATCGCCGCGATCCACCTGAAAGACACCCAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGCGCCGTTTGGCGAAGGCTGCGTCG > SRR4302532.2949538/1‑94 (MQ=60)
GTATCGCCGCGATCCGCCTGAAAGACACCCAGCCAGTCAACGGGCAAAGTCCCGGACAGTTCCGCGAGGCGCCGTTATGCGAAGCCTGCGTCGA > SRR4302532.804767/1‑94 (MQ=60)
TATCGCCGCGATCCCCCTGAAAGACACCCAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGCGCCGTTTGGCGAAGGCTGCGTCGAT < SRR4302532.3896354/94‑1 (MQ=60)
TATCGCCGCGATCCACCTGAAAGACACCCAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGTGCCGTTTGGCGAAGGCTGCGTCGAT < SRR4302532.4180344/94‑1 (MQ=60)
TATCGCCGCGATCCACCTGAAAGACACCCAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGTGCCGTTTGGCGAAGGCTGCGTCGAT < SRR4302532.5042887/94‑1 (MQ=60)
gtccCCGCGAGCCACCTGAAAGCCACCCAGCCCGTCGCCGGGCAAACGCCCGGACAGTTCCCCGACGCGCCGTTTGGCGAAGGCTGCGTCGATT < SRR4302532.5624853/90‑1 (MQ=57)
TCGCCGCGATCCACCTGAAAGACACCCAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGCGCCGTTTGGCGAAGGCTGCGTCGATTT < SRR4302532.2005929/94‑1 (MQ=60)
CGCCGCGATCCACCTGAAAGACACCCAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGCGCCGTTTGGCGAAGGCTGCGTCGATTTC > SRR4302532.1294333/1‑94 (MQ=60)
CGCCGCGATCCACCTGAAAGACACCCAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGCGCCGTTTGGCGAAGGCTGCGTCGATTTC < SRR4302532.4817251/94‑1 (MQ=60)
GCCGCGATCCACCTGAAAGACACCCAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGTGCCGTTTGGCGAAGGCTGCGTCGATTTCG > SRR4302532.5724795/1‑94 (MQ=60)
CGCGATCCACCTGAAAGACCCCCAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGTGCCGTTTGGCGAAGGCTGCGTCGATTTCGTT < SRR4302532.4999879/94‑1 (MQ=60)
CGCGATCCACCTGAAAGACACCCAGCCAGTCACCGGGCCAAGTCCCGGACAGTTCCGCGACGCGCCGTTTGGCGAAGGCTGCGTCGATTTCGTT < SRR4302532.5674022/94‑1 (MQ=60)
CGCGATCCACCTGAAAGACACCCAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGTGCCGTTTGGCGAAGGCTGCGTCGATTTCGTT < SRR4302532.2645206/94‑1 (MQ=60)
GCGATCCACCTGAAAGACACCCAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGCGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTG < SRR4302532.3805761/94‑1 (MQ=60)
CGATCCACCTGAAAGACACCCAGCGAGTCACCGGTCAAAGTCCCGGACAGTTCCGCGACGTGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGG < SRR4302532.4537180/94‑1 (MQ=60)
CGATCCACCTGAAAGACACCCAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGCGCCGTTTGGCGAAGGATGAGTCGATTTCGTTGG > SRR4302532.2576497/1‑94 (MQ=60)
GATCCACCTGAAAGACACCCAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGTGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGC > SRR4302532.1105944/1‑94 (MQ=60)
GATCCACCTGAAAGACACCCAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGCGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGC > SRR4302532.2256260/1‑94 (MQ=60)
ATCCACCTGAAAGACACCCAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGTGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGCA > SRR4302532.5994846/1‑94 (MQ=60)
TCCCCCTGAAAGACACCCAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGCGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGCAT < SRR4302532.3665060/94‑1 (MQ=60)
TCCACCTGAAAGACACCCAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGCGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGCAT < SRR4302532.1214785/94‑1 (MQ=60)
CACCTGAAAGACACCCAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGCGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGCATCT > SRR4302532.2976041/1‑94 (MQ=60)
CCTGAAAGACACCCAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGTGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGCATCTTC > SRR4302532.338610/1‑94 (MQ=60)
CCTGAAAGACACCCAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGTGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGCATCTTC > SRR4302532.1703355/1‑94 (MQ=60)
CTGAAAGACACCCAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGTGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGCATCTTCA > SRR4302532.453962/1‑94 (MQ=60)
CTGAAAGACACCCAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGTGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGCATCTTCA < SRR4302532.2710706/94‑1 (MQ=60)
CGGAAAGACCCCCAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGTGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGCATCTTCA < SRR4302532.2548454/94‑1 (MQ=60)
TGAAAGACACCCAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGCGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGCATCTTCAA > SRR4302532.5910990/1‑94 (MQ=60)
TGAAAGACACCCAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGCGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGCATCTTCAA > SRR4302532.5845785/1‑94 (MQ=60)
GAAAGACACCCAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGCGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGCATCTTCAAA < SRR4302532.4760013/94‑1 (MQ=60)
AAAGACACCCAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGCGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGTCATCTTCAAAA > SRR4302532.1475790/1‑94 (MQ=60)
AAAGACACCCAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGCGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGCATCTTCAAAA > SRR4302532.1475789/1‑94 (MQ=60)
AAGGCACCCAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGCGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGCATCTTCAAAAC < SRR4302532.4744073/94‑1 (MQ=60)
AAGACACCCAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGCGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGCATCTTCAAAAC < SRR4302532.2785461/94‑1 (MQ=60)
AGACACCCAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGCGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGCATCTTCAAAACG < SRR4302532.3880753/94‑1 (MQ=60)
ACACCCAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGCGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGCATCTTCAAAACGCT < SRR4302532.1880759/94‑1 (MQ=60)
CACCCAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGTGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGCATCTTCAAAACGCTG > SRR4302532.1989623/1‑94 (MQ=60)
CCCCAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGTGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGCATCTTCAAAACGCTGC < SRR4302532.1519794/94‑1 (MQ=60)
CCCAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGTGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGCATCTTCAAAACGCTGCA < SRR4302532.3858080/94‑1 (MQ=60)
CCCAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGCGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGCATCTTCAAAACGCcgcc > SRR4302532.288253/1‑90 (MQ=60)
CCCAGCCAGTCACCGGACAAAGTCCCGGACAGTTCCGCGACGCGCCGTTTGGCGAAGGCTGCGCCGATTTCGTTGGCATCTTCAAAACGCTGCA < SRR4302532.1703747/94‑1 (MQ=60)
CCAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGTGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGCATCTTCAAAACGCTGCAA > SRR4302532.5544059/1‑94 (MQ=60)
CAGCCCGTCACCGGGCAAAGTCCCGGACAGTGCCGCGACGCGCCGTTTGGCGAAGGCTGCGCCGATTTCGTTGGCATCTTCAAAACGCTGCATA < SRR4302532.863224/94‑1 (MQ=60)
CAGCCAGTCGCCGGGCAAAGTCCCGGACAGTTCCGCGACGCGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGCATCTTCAAAACGCTGCATA < SRR4302532.863223/94‑1 (MQ=60)
CAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGTGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGCATCTTCAAAACGCTGCCTA > SRR4302532.1644877/1‑94 (MQ=60)
CAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGCGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGCATCTTCAAAACGCTGCATA > SRR4302532.5414649/1‑94 (MQ=60)
AGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGTGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGCATCTTCAAAACGCTGCATAA > SRR4302532.238936/1‑94 (MQ=60)
GCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGCGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGCATCTTCAAAACGCTGCATAAA < SRR4302532.1760685/94‑1 (MQ=60)
GCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGCGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGCATCTTCAAAACGCTGCATAAA < SRR4302532.3314463/94‑1 (MQ=60)
CCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGTGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGCATCTTCAAAACGCTGCATAAAC < SRR4302532.1742386/94‑1 (MQ=60)
CAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGCGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGCATCTTCAAAACGCTGCATAAACT < SRR4302532.2843356/94‑1 (MQ=60)
CAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGCGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGCATCTTCAAAACGCTGCATAAACT < SRR4302532.4751941/94‑1 (MQ=60)
AGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGCGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGCATCTTCAAAACGCTGCATAAACTG < SRR4302532.6336215/94‑1 (MQ=60)
AGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGCGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGCATCTTCAAAACGCTGCATAAACTG < SRR4302532.4937820/94‑1 (MQ=60)
GTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGCGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGCATCTTCAAAACGCTGCATAAACTGA < SRR4302532.4232515/94‑1 (MQ=60)
GTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGCGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGCATCTTCAAAACGCTGCATAAACTGA > SRR4302532.281620/1‑94 (MQ=60)
CACCGGGCAAAGTCCCGGACAGTTCCGCGACGTGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGCATCTTCAAAACGCTGCATAAACTGAAC > SRR4302532.4093100/1‑94 (MQ=60)
CACCGGGCAAAGTCCCGGACAGTTCCGCGACGCGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGCATCTTCAAAACGCTGCATAAACTGAAC > SRR4302532.6025941/1‑94 (MQ=60)
CACCGGGCAAAGTCCCGGACAGTTCCGCGACGCGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGCATCTTCAAAACGCTGCATAAACTGAAC > SRR4302532.246128/1‑94 (MQ=60)
ACCGGGCAAAGTCCCGGACAGTTCCGCGACGTGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGCATCTTCAAAACGCTGCATAAACTGAACT < SRR4302532.5933788/94‑1 (MQ=60)
ACCGGGCAAAGTCCCGGACAGTTCCGCGACGTGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGCATCTTCAAAACGCTGCATAAACTGAACT > SRR4302532.4308152/1‑94 (MQ=60)
CCGGGCAAAGTCCCGGACAGTTCCGCGACGTGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGCATCTTCAAAACGCTGCATAAACTGATCTA < SRR4302532.3192055/94‑1 (MQ=60)
CCGGGCAAAGTCCCGGACAGTTCCGCGACGTGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGCATCTTCAAAACGCTGCATAAACTGAACTA > SRR4302532.6325758/1‑94 (MQ=60)
CGGGCAAAGTCCCGGACAGTTCCGCGACGCGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGCATCTTCAAAACGCTGCATAAACTGAACTAT < SRR4302532.585399/94‑1 (MQ=60)
GGGCAAAGTCCCGGACAGTTCCGCGACGCGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGCATCTTCAAAACGCTGCATAAACTGAACTATC < SRR4302532.4630345/94‑1 (MQ=60)
GGGCAAAGTCCCGGACAGTTCCGCGACGCGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGCATCTTCAAAACGCTGCATAAACTGAACTATC > SRR4302532.4317989/1‑94 (MQ=60)
GGCAAAGTCCCGGACAGTTCCGCGACGCGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGCATCTTCAAAACGCTGCATAAACTGAACTATCG < SRR4302532.4400557/94‑1 (MQ=60)
GCAAAGTCCCGGACAGTTCCGCGACGCGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGCATCTTCAAAACGCTGCATAAACTGAACTATCGC < SRR4302532.2814530/94‑1 (MQ=60)
CAAAGTCCCGGACAGTTCCGCGACGTGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGCATCTTCAAAACGCTGCATAAACTGAACTATCGCG < SRR4302532.5563927/94‑1 (MQ=60)
CAAAGTCCCGGACAGTTCCGCGACGCGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGCATCTTCAAAACGCTGCATAAACTGAACTATCGCG < SRR4302532.5431457/94‑1 (MQ=60)
CAAAGTCCCGGACAGTTCCGCGACGCGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGCATCTTCAAAACGCTGCATAAACTGAACTATCGCG < SRR4302532.3416940/94‑1 (MQ=60)
CAAAGTCCCGGACAGTTCCGCGACGCGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGCATCTTCAAAACGCTGCATAAACTGAACTATCGCG > SRR4302532.3161517/1‑94 (MQ=60)
AAAGTCCCGGACAGTTCCGCGACGCGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGCATCTTCAAAACGCTGCATAAACTGAACTATCGCGG > SRR4302532.415012/1‑94 (MQ=60)
AGTCCCGGACAGTTCCGCGACGCGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGCATCTTCAAAACGCTGCATAAACTGAACTATCGCGGTT < SRR4302532.4496626/94‑1 (MQ=60)
AGTCCCGGACAGTTCCGCGACGCGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGCATCTTCAAAACGCTGCATAAACTGAACTATCGCGGTT < SRR4302532.3340761/94‑1 (MQ=60)
AGTCCCGGACAGTTCCGCGACGCGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGCATCTTCAAAACGCTGCATAAACTGAACTATCGCGGTT > SRR4302532.4194456/1‑94 (MQ=60)
AGTCCCGGACAGTTCCGCGACGCGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGCATCTTCAAAACGCTGCATAAACTGAACTATCGCGGTT < SRR4302532.456702/94‑1 (MQ=60)
CGGACAGTTCCGCGACGTGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGCATCTTCAAAACGCTGCATAAACTGAACTATCGCGGTTCTTTC > SRR4302532.3535259/1‑94 (MQ=60)
GGACAGTTCCGCGACGCGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGCATCTTCAAAACGCTGCATAAACTGAACTATCGCGGTTCTTTCC < SRR4302532.2597991/94‑1 (MQ=60)
GACAGTTCCGCGACGTGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGCATCTTCAAAACGCTGCATAAACTGAACTATCGCGGTTCTTTCCT < SRR4302532.2911362/94‑1 (MQ=60)
GACAGTTCCGCGACGCGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGCATCTTCAAAACGCTGCATAAACTGAACTATCGCGGTTCTTTCCT < SRR4302532.3758763/94‑1 (MQ=60)
CAGTTCCGCGACGTGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGCATCTTCAAAACGCTGCATAAACTGAACTATCGCGGTTCTTTCCTGT > SRR4302532.4444027/1‑94 (MQ=60)
GTTCCGCGACGCGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGCATCTTCAAAACGCTGCATAAACTGAACTATCGCGGTTCTTTCCTGATT > SRR4302532.3838111/1‑94 (MQ=60)
TTCCGCGACGTGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGCATCTTCAAAACGCTGCATAAACTGAACTATCGCGGTTCTTTCCTGATTG > SRR4302532.2392571/1‑94 (MQ=60)
TTCCGCGACGTGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGCATCTTCAAAACGCTGCATAAACTGAACTATCGCGGTTCTTTCCTGATTG > SRR4302532.4806859/1‑94 (MQ=60)
TTCCGCGACGCGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGCATCTTCAAAACGCTGCATAAACTGAACTATCGCGGTTCTTTCCTGATTG < SRR4302532.3802033/94‑1 (MQ=60)
CCGCGTCGCGCCGTTTTGCGAATGCTGCGGCTATTTCGTTGGAATCTTCAAAACGCTGCATAAACTGATCTAGCGCGGTTCTTTCCTGATTGAG < SRR4302532.1741747/94‑1 (MQ=55)
CCGCGACGTGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGCATCTTCAAAACGCTGCATAAACTGAACTATCGCGGTTCTTTCCTGATTGAG > SRR4302532.421749/1‑94 (MQ=60)
CCGCGACGCGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGCATCTTCAAAACGCTGCATAAACTGAACTATCGCGGTACTTTCCTGATTGAG < SRR4302532.4161001/94‑1 (MQ=60)
CGCGACGTGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGCATCTTCAAAACGCTGCATAAACTGAACTATCGCGGTTCTTTCCTGATTGAGA < SRR4302532.4958412/94‑1 (MQ=60)
GCGACGTGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGCATCTTCAAAACGCTGCATAAACTGAACTATCGCGGTTCTTTCCTGATTGAGAT > SRR4302532.6204389/1‑94 (MQ=60)
CGACGTGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGCATCTTCAAAACGCTGCATAAACTGAACTATCGCGGTTCTTTCCTGATTGAGATG < SRR4302532.1897148/94‑1 (MQ=60)
CGACGTGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGCATCTTCAAAACGCTGCATAAACTGAACTATCGCGGTTCTTTCCTGATTGAGATG < SRR4302532.1816501/94‑1 (MQ=60)
CGACGCGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGCATCTTCAAAACGCTGCATAAACTGAACTATCGCGGTTCTTTCCTGATTGAGATG > SRR4302532.1603392/1‑94 (MQ=60)
GACGTGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGCATCTTCAAAACGCTGCATAAACTGAACTATCGCGGTTCTTTCCTGATTGAGATGT > SRR4302532.2659247/1‑94 (MQ=60)
ACGTGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGCATCTTCAAAACGCTGCATAAACTGAACTATCGCGGTTCTTTCCTGATTGAGATGTG < SRR4302532.1495242/94‑1 (MQ=60)
CGTGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGCATCTTCAAAACGCTGCATAAACTGAACTATCGCGGTTCTTTCCTGATTGAGATGTGG < SRR4302532.2491235/94‑1 (MQ=60)
CGTGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGAATCTTCAAAACGCTGCATAAACTGAACTATCGCGGTTCTTTCCTGATTGAGATGTGG > SRR4302532.5909540/1‑94 (MQ=60)
CGCGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGCATCTTCAAAACGCTGCATAAACTGAACTATCGCGGTTCTTTCCTGATTGAGATGTGG < SRR4302532.2554964/94‑1 (MQ=60)
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CCGAACTGAAACTGGGCATTGACCGTATCGCCGCGATCCACCTGAAAGACACCCAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGTGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGCATCTTCAAAACGCTGCATAAACTGAACTATCGCGGTTCTTTCCTGATTGAGATGTGG > NC_000913/3747448‑3747632
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
