Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 521 238.2 12299412 96.0% 11807435 93.0

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output
GAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTG  >  NC_000913/3778626‑3778812
                                                                                             |                                                                                             
GAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACT                                                                                               <  SRR4302532.1111342/94‑1 (MQ=60)
GAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACT                                                                                               <  SRR4302532.4567838/94‑1 (MQ=60)
  AAGAGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTACCCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCT                                                                                             <  SRR4302532.6250347/94‑1 (MQ=60)
   AGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG                                                                                            <  SRR4302532.1472949/94‑1 (MQ=60)
       AATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAAC                                                                                        <  SRR4302532.1211335/94‑1 (MQ=60)
         TGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCCCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACCCTGCAACGA                                                                                      >  SRR4302532.4101477/1‑94 (MQ=60)
          GCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGAC                                                                                     <  SRR4302532.2733665/94‑1 (MQ=60)
          GCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGAC                                                                                     <  SRR4302532.4710210/94‑1 (MQ=60)
          GCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACCCTGAAACGAC                                                                                     <  SRR4302532.2327356/94‑1 (MQ=60)
           CGGCATGGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACCCTGAAACGACA                                                                                    <  SRR4302532.4850072/94‑1 (MQ=60)
                     GTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACCCTGAAACGACACCGTACTCTT                                                                          <  SRR4302532.1875196/94‑1 (MQ=60)
                      TTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTT                                                                         <  SRR4302532.5281148/94‑1 (MQ=60)
                       TTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTT                                                                        <  SRR4302532.270382/94‑1 (MQ=60)
                       TTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTT                                                                        <  SRR4302532.1390187/94‑1 (MQ=60)
                           GCCCGCTCGCCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATTTACTCCCTCACTCTGAAACGACACCGCTCTCTTTTTTTC                                                                    <  SRR4302532.5433782/94‑1 (MQ=60)
                           GCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGGCCGGTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTT                                                                    >  SRR4302532.1203916/1‑94 (MQ=60)
                              CCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCC                                                                 >  SRR4302532.3310692/1‑94 (MQ=60)
                              CCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACCCTGAAACGACACCGCACTCTTTTTTTCTCC                                                                 >  SRR4302532.6283609/1‑94 (MQ=60)
                               CCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACCCTGAAACGACACCGCACTCTTTTTTTCTCCC                                                                >  SRR4302532.1139424/1‑94 (MQ=60)
                               CCTCACCCTAACCCTCTCCCTCAGGGAGAAGGGACCGTTCGGCGCTGTATGTACTCCCTCACCCTGAAACGACACCGCACTCTTTTTTTCTCCC                                                                >  SRR4302532.1407273/1‑94 (MQ=60)
                                cgcatCCTAACCCGCTCCATCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCCCTCTGAAACGACACCGCCGTCTTTTTTTCTCCCT                                                               <  SRR4302532.4104266/89‑1 (MQ=60)
                                CTCACCCTAACCCTCTCCCTCAGGGAGAGGGTACCGTTCGGCGCTGTATGTACTCCCTCACCCTGAAACGACACCGCACTCTTTTTTTCTCCCT                                                               <  SRR4302532.5275250/94‑1 (MQ=60)
                                CTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCGCCCTGAAACGACACCGCACTCTTTTTTTCTCCCT                                                               <  SRR4302532.2499239/94‑1 (MQ=60)
                                CTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCT                                                               <  SRR4302532.6340270/94‑1 (MQ=60)
                                CTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCT                                                               >  SRR4302532.2628555/1‑94 (MQ=60)
                                CTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCT                                                               <  SRR4302532.2521440/94‑1 (MQ=60)
                                CTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACCCTGAAACGACACCGCACTCTTTTTTTCTCCCT                                                               >  SRR4302532.4576421/1‑94 (MQ=60)
                                CTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACCCTGAAACGACACCGCACTCTTTTTTTCTCCCT                                                               <  SRR4302532.3913156/94‑1 (MQ=60)
                                CTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACCCTGAAACGACACCGCACTCTTTTTTTCTCCCT                                                               <  SRR4302532.5275251/94‑1 (MQ=60)
                                 TCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACCCTGAAACGACACCGCACTCTTTTTTTCTCCCTC                                                              <  SRR4302532.2059488/94‑1 (MQ=60)
                                 CCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCGCCCTGAAACGACACCGCACTCTTTTTTTCTCCCTC                                                              <  SRR4302532.1298261/94‑1 (MQ=60)
                                  CACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACCCTGAAACGACACCGCACTCTTTTTTTCTCCCTCG                                                             <  SRR4302532.925954/94‑1 (MQ=60)
                                  AACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACCCTGAAACGACACAGCACTCTTTTTTTCTCCCTCG                                                             >  SRR4302532.4778733/1‑94 (MQ=60)
                                   ACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACCCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGC                                                            <  SRR4302532.372833/94‑1 (MQ=60)
                                   ACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACCCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGC                                                            >  SRR4302532.1550284/1‑94 (MQ=60)
                                   ACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACCCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGC                                                            >  SRR4302532.1752719/1‑94 (MQ=60)
                                   ACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACCCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGC                                                            >  SRR4302532.2040861/1‑94 (MQ=60)
                                    CCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACCCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCC                                                           <  SRR4302532.2941539/94‑1 (MQ=60)
                                    CCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACCCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCC                                                           >  SRR4302532.4392802/1‑94 (MQ=60)
                                      CTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACCCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCC                                                         <  SRR4302532.5045838/94‑1 (MQ=60)
                                       cagCCCTCTCCCGCAGGGAGGGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCT                                                        <  SRR4302532.4630035/91‑1 (MQ=60)
                                       CAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCT                                                        <  SRR4302532.6184423/94‑1 (MQ=60)
                                        AACCCTCCCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACCCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTC                                                       <  SRR4302532.4989737/94‑1 (MQ=60)
                                          CCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACCCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCG                                                     >  SRR4302532.5904687/1‑94 (MQ=60)
                                          CCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACCCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCG                                                     <  SRR4302532.1751285/94‑1 (MQ=60)
                                          CCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACCCCCTCACCCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCG                                                     >  SRR4302532.2481002/1‑94 (MQ=60)
                                           CCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGG                                                    <  SRR4302532.3275492/94‑1 (MQ=60)
                                           CCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACCCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGG                                                    >  SRR4302532.4505909/1‑94 (MQ=60)
                                            CTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACCCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGG                                                   <  SRR4302532.5589779/94‑1 (MQ=60)
                                            CTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACCCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGG                                                   >  SRR4302532.4512959/1‑94 (MQ=60)
                                            CTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACCCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGG                                                   <  SRR4302532.533559/94‑1 (MQ=60)
                                            CTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACCCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGG                                                   >  SRR4302532.2573448/1‑94 (MQ=60)
                                             CCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACCCTGAACCGTCACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGG                                                  <  SRR4302532.2236850/94‑1 (MQ=60)
                                             CCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACCCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGG                                                  <  SRR4302532.2236849/94‑1 (MQ=60)
                                              CTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGA                                                 <  SRR4302532.1693636/94‑1 (MQ=60)
                                              CTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACCCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGA                                                 >  SRR4302532.4997267/1‑94 (MQ=60)
                                               tccgtcagggagagggtgccggtgggcagTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTGTTTTTCTCCCTCGCCCCTCCGGGGAG                                                <  SRR4302532.3089411/65‑1 (MQ=60)
                                                 CCTCAGGGAGAGGGGCCCGTGCGGCGCTGTATGTACTCCCTCCCCCTGACACGACCCCG‑‑CTCTCTTTTTCTCCCTCGCCCCTCCGGGGAGAGGG                                            <  SRR4302532.2120696/94‑1 (MQ=49)
                                                 CCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACCCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAG                                              <  SRR4302532.3220939/94‑1 (MQ=60)
                                                 CCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACCCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAG                                              >  SRR4302532.5107505/1‑94 (MQ=60)
                                                  CTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGG                                             <  SRR4302532.4085308/94‑1 (MQ=60)
                                                  CTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGG                                             <  SRR4302532.4442138/94‑1 (MQ=60)
                                                   CCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGG                                            <  SRR4302532.1496632/94‑1 (MQ=60)
                                                    CAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGC                                           <  SRR4302532.3407401/94‑1 (MQ=60)
                                                    CAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACCCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGC                                           <  SRR4302532.6244153/94‑1 (MQ=60)
                                                     AGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCGCCCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC                                          <  SRR4302532.1969850/94‑1 (MQ=60)
                                                     AGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC                                          <  SRR4302532.2549555/94‑1 (MQ=60)
                                                     AGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACCCTGAAACGACACCGCTCTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC                                          <  SRR4302532.4586471/94‑1 (MQ=60)
                                                       GGAGAGGGAACCGTTCGGCGCTGTATGTACTCCCTCACCCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGG                                        <  SRR4302532.30368/94‑1 (MQ=60)
                                                        GAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACCCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGG                                       <  SRR4302532.4584084/94‑1 (MQ=60)
                                                        GAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACCCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGG                                       <  SRR4302532.902204/94‑1 (MQ=60)
                                                          GAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGAACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGG                                     >  SRR4302532.6015229/1‑94 (MQ=60)
                                                           AGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTG                                    >  SRR4302532.345698/1‑94 (MQ=60)
                                                           AGGGGACCGTTCGGCGCTGTATGTACTCCCTCACCCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTG                                    >  SRR4302532.3763808/1‑94 (MQ=60)
                                                            GGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGA                                   >  SRR4302532.919230/1‑94 (MQ=60)
                                                             GGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAG                                  <  SRR4302532.2085734/94‑1 (MQ=60)
                                                             GGGACCGTTCGGCGCTGTATGTACTCCCTCACCCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAG                                  <  SRR4302532.776279/94‑1 (MQ=60)
                                                             GGGACCGTCCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAG                                  <  SRR4302532.898882/94‑1 (MQ=60)
                                                              GGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGG                                 <  SRR4302532.950343/94‑1 (MQ=60)
                                                               GACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAACCGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGG                                <  SRR4302532.1168528/94‑1 (MQ=60)
                                                               GACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGG                                >  SRR4302532.1636932/1‑94 (MQ=60)
                                                               GACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACAACGCACTCTTTTTTTCTCCATCGCCCCTCCGGGGAGAGGGCCGGGGAGAAGG                                >  SRR4302532.1171277/1‑94 (MQ=60)
                                                               GACCGTTCGGCGCTGTATGTACTCCCTCACCCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGG                                <  SRR4302532.5195736/94‑1 (MQ=60)
                                                                ACCGTTCGGCGCTGTATGTACTCCCTCACCCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGG                               <  SRR4302532.4415658/94‑1 (MQ=60)
                                                                  CGTTCGGCGCTGTATGTACTCCCTCACCCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAA                             >  SRR4302532.4866012/1‑94 (MQ=60)
                                                                   GTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAA                            >  SRR4302532.1082692/1‑94 (MQ=60)
                                                                       GGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGC                        >  SRR4302532.2436652/1‑94 (MQ=60)
                                                                           CTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCA                    >  SRR4302532.5628662/1‑94 (MQ=60)
                                                                           CTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCA                    >  SRR4302532.5944897/1‑94 (MQ=60)
                                                                             GTATGTACTCCCTCACCCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACT                  >  SRR4302532.1942282/1‑94 (MQ=60)
                                                                             GTATGTACTCCCTCACCCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACT                  >  SRR4302532.2314930/1‑94 (MQ=60)
                                                                             GTATGTACTCCCTCACCCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCAGGGGTGAGGGGGAAAGGTCGCACT                  >  SRR4302532.3861342/1‑94 (MQ=60)
                                                                               ATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGC                >  SRR4302532.1782683/1‑94 (MQ=60)
                                                                                TGTCCTCCCTCACCCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCT               <  SRR4302532.2294585/94‑1 (MQ=60)
                                                                                    CTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACA           >  SRR4302532.4717066/1‑94 (MQ=60)
                                                                                    CTCCCTCACCCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACC           >  SRR4302532.5008645/1‑94 (MQ=60)
                                                                                     TCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCA          >  SRR4302532.2928286/1‑94 (MQ=60)
                                                                                      CCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAA         >  SRR4302532.1536058/1‑94 (MQ=60)
                                                                                       CCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCAGTGCTCACCAAT        >  SRR4302532.2178575/1‑94 (MQ=60)
                                                                                        CTCACCCTGAAACGACACCCCACTCTTTTTTTCTCCCTCGCCCCTCGGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATT       <  SRR4302532.5444467/94‑1 (MQ=60)
                                                                                          CACCCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTT     >  SRR4302532.6078818/1‑94 (MQ=60)
                                                                                             CCTGAAACAACACCGCTCTCTTTTTTTCTCCCGCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTG  <  SRR4302532.3452632/94‑1 (MQ=60)
                                                                                             |                                                                                             
GAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTG  >  NC_000913/3778626‑3778812

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑