Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
521 |
238.2 |
12299412 |
96.0% |
11807435 |
93.0 |
Breseq alignment
N/A
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TAACGAAGCGCGGGCGCAGCTCATCACGCTGCGCCGAAGCGTGCTAAAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTGCTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCATGTAGAAGCGTTATGCGACGCGGAAGACGTGCTGGTGTGGTCCGTGGCGGT > NC_000913/3891920‑3892105
|
TAACGAAGCGCGGGCGCAGCTCATCACGCTGCGCCGAAGCGTGCTAAAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTA > SRR4302532.2795326/1‑94 (MQ=60)
TAACGAAGCGCGGGCGCAGCTCATCACGCTGCGCCGAAGCGTGCTAAAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTA > SRR4302532.3635300/1‑94 (MQ=60)
AACGAAGCGCGGGCGCAGCTCATCACGCTGCGCCGAAGCGTGCTAAAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTAC < SRR4302532.3278539/94‑1 (MQ=60)
AACGAAGCGCGGGCGCAGCTCATCACGCTGCGCCGAAGCGTGCTAAAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTAC < SRR4302532.3278538/94‑1 (MQ=60)
AACGAAGCGCGGGCGCAGCTCATCACGCTGCGCCGAAGCGTGCTAAAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTAC > SRR4302532.4109991/1‑94 (MQ=60)
AACGAAGCGCGGGCGCAGCTCATCACGCTGCGCCGAAGCGTGCTAAAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTAC > SRR4302532.5785773/1‑94 (MQ=60)
ACGAAGCGCGGGCGCAGCTCATCACGCTGCGCCGAAGCGTGCTAAAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTGCT > SRR4302532.4594914/1‑94 (MQ=60)
GAAGCGCGGGCGCAGCTCATCACGCTGCGCCGAAGCGTGCTAAAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTACTGC < SRR4302532.1657486/94‑1 (MQ=60)
GAAGCGCGGGCGCAGCTCATCACGCTGCGCCGAAGCGTGCTAAAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTACTGC > SRR4302532.3254103/1‑94 (MQ=60)
GAAGCGCGGGCGAAGCTCATCCCGCTGCGCCGAAGCGTGCTAAAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTGCTGC < SRR4302532.1920341/94‑1 (MQ=60)
AAGCGCGGGCGCAGCTCATCACGCTGCGCCGAAGCGTGCTAAAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTGCTGCC > SRR4302532.2707807/1‑94 (MQ=60)
AAGCGCGGGCGCAGCTCATCACGCTGCGCCGAAGCGTGCTAAAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTACTGCC < SRR4302532.3070452/94‑1 (MQ=60)
CGCGGGCGCAGCTCATCACGCTGCGCCGAAGCGTGCTAAAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTGCTGCCCAT > SRR4302532.5406129/1‑94 (MQ=60)
CGCGGGCGCAGCTCATCACGCTGCGCCGAAGCGTGCTAAAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTACTGCCCAT > SRR4302532.1222822/1‑94 (MQ=60)
GCGGGCGCAGCTCATCACGCTGCGCCGAAGCGTGCTAAAACTAACCAGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTACTGCCCATT < SRR4302532.6156834/94‑1 (MQ=60)
GGCGCAGCTCATCACGCTGCGCCGAAGCGTGCTAAAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTGCTGCCCATTGCC < SRR4302532.179158/94‑1 (MQ=60)
GGCGCAGCTCATCACGCTGCGCCGAAGCGTGCTAAAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTGCTGCCCATTGCC < SRR4302532.179160/94‑1 (MQ=60)
GCGCAGCTCATCACGCTGCGCCGAAGCGTGCTAAAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTACTGCCCATTGCCG < SRR4302532.4604282/94‑1 (MQ=60)
CGCAGCTCATCACGCTGCGCCGAAGCGTGCTAAAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTACTGCCCATTGCCGG < SRR4302532.1341040/94‑1 (MQ=60)
GCAGCTCATCACGCTGCGCCGAAGCGTGCTAAAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTACTGCCCATTGCCGGA > SRR4302532.4798908/1‑94 (MQ=60)
CAGCTCATCACGCTGCGCCGAAGCGTGCTAAAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTACTGCCCATTGCCGGAC < SRR4302532.251729/94‑1 (MQ=60)
CAGCTCATCACGCTGCGCCGAAGCGTGCTAAAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTACTGCCCATTGCCGGAC > SRR4302532.5067289/1‑94 (MQ=60)
AGCTCATCACGCTGCGCCGAAGCGTGCTAAAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTACTGCCCATTGCCGGACG < SRR4302532.5029355/94‑1 (MQ=60)
AGCTCATCACGCTGCGCCGAAGCGTGCTAAAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTACTGCCCATTGCCGGACG > SRR4302532.4421692/1‑94 (MQ=60)
AGCTCATCACGCTGCGCCGAAGCGTGCTAAAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTACTGCCCATTGCCGGACG > SRR4302532.4421693/1‑94 (MQ=60)
AGCTCATCACGCTGCGCCGAAGCGTGCTAAAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTACTGCCCATTGCCGGACG < SRR4302532.4435493/94‑1 (MQ=60)
AGCTCATCACGCTGCGCCGAAGCGTGCTAAAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTACTGCCCATTGCCGGACG > SRR4302532.5039255/1‑94 (MQ=60)
CTCATCACGCTGCGCCGAAGCGTGCTAAAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTACTGCCCATTGCCGGACGCC > SRR4302532.4087174/1‑94 (MQ=60)
CTCATCACGCTGCGCCGAAGCGTGCTAAAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTACTGCCCATTGCCGGACGCC < SRR4302532.3385331/94‑1 (MQ=60)
TCATCACGCTGCGCCGAAGCGTGCTAAAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTACTGCCCATTGCCGGACGCCT < SRR4302532.3780413/94‑1 (MQ=60)
TCATCACGCTGCGCCGAAGCGTGCTAAAACTAACCGGTGACGCTTTGAATGACGATCCGCGCGATCTGCAGCTGCTGCCCATTGCCGGGCGCCT > SRR4302532.3483600/1‑94 (MQ=60)
CATCACGCTGCGCCGAAGCGTGCTAAAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTACTGCCCATTGCCGGACGCCTG > SRR4302532.6278749/1‑94 (MQ=60)
TCACGCTGCGCCGAAGCGTGCTAAAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTACTGCCCATTGCCGGACGCCTGAA < SRR4302532.3718722/94‑1 (MQ=60)
CACGCTGCGCCGAAGCGTGCTAAAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTGCTGCCCATTGCCGGACGCCTGAAA > SRR4302532.1622310/1‑94 (MQ=60)
CACGCTGCGCCGAAGCGTGCTAAAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTACTGCCCATTGCCGGACGCCTGAAA > SRR4302532.4614148/1‑94 (MQ=60)
ACGCTGCGCCGAAGCGTGCTAAAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTGCTGCCCATTGCCGGACGCCTGAAAT < SRR4302532.1223200/94‑1 (MQ=60)
ACGCTGCGCCGAAGCGTGCTAAAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTACTGCCCATTGCCGGACGCCTGAAAT < SRR4302532.902707/94‑1 (MQ=60)
ACGCTGCGCCGAAGCGTGCTAAAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTACTGCCCATTGCCGGACGCCTGAAAT < SRR4302532.2925331/94‑1 (MQ=60)
CTGCGCCGAAGCGTGCTAAAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTACTGCCCATTGCCGGACGCCTGAAATGTG < SRR4302532.2450628/94‑1 (MQ=60)
CTGCGCCGAAGCGTGCTAAAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTACTGCCCATTGCCGGACGCCTGAAATGTG < SRR4302532.2903523/94‑1 (MQ=60)
CTGCGCCGAAGCGTGCTAAAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTACTGCCCATTGCCGGACGCCTGAAATGTG < SRR4302532.5925370/94‑1 (MQ=60)
TGCCGAAGCGTGCTAAAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTGCTGCCCATTGCCGGACGCCTGAAATGTGCTC > SRR4302532.2682428/1‑94 (MQ=60)
CGCCGAAGCGTGCTAAAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTACTGCCCATTGCCGGACGCCTGAAATGTGCTC < SRR4302532.4602374/94‑1 (MQ=60)
CGCCGAAGCGTGCTAAAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTACTGCCCATTGCCGGACGCCTGAAATGTGCTC < SRR4302532.4794186/94‑1 (MQ=60)
CGCCGAAGCGTGCTAAAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTACTGCCCATTGCCGGACGCCTGAAATGTGCTC < SRR4302532.514459/94‑1 (MQ=60)
CGCCGAAGAGTGCTAAAACTAGCCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTGCTGCCCATTGCCGGACGCCTGAAATGTGCTC < SRR4302532.248969/94‑1 (MQ=60)
GCCGAAGCGTGCTAAAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTGCTGCCCATTGCCGGACGCCTGAAATGTGCTCA > SRR4302532.3930093/1‑94 (MQ=60)
GCCGAAGCGTGCTAAAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTACTGCCCATTGCCGGACGCCTGAAATGTGCTCA > SRR4302532.3692451/1‑94 (MQ=60)
CCGAAGCGTGCTAAAACTAACCGGTTATGTTTTGAATGACGATCCGCGCGATCTTCAGCTGCTGCCCATTGCCGGACGCCTGAAATGTGCTCAT < SRR4302532.5611449/94‑1 (MQ=60)
CCGAAGCGTGCTAAAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTACTGCCCATTGCCGGACGCCTGAAATGTGCTCAT > SRR4302532.4923284/1‑94 (MQ=60)
CGAAGCGTGCTAAAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTGCTGCCCATTGCCGGACGCCTGAAATGTGCTCATG < SRR4302532.5321336/94‑1 (MQ=60)
CGAAGCGTGCTAAAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTGCTGCCCATTGCCGGACGCCTGAAATGTGCTCATG < SRR4302532.6252059/94‑1 (MQ=60)
CGAAGCGTGCTAAAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTGCTGCCCATTGCCGGACGCCTGAAATGTGCTCATG < SRR4302532.4578138/94‑1 (MQ=60)
GAAGCGTGCTAAAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTACTGCCCATTGCCGGACGCCTGAAATGTGCTCATGT < SRR4302532.612363/94‑1 (MQ=60)
AAGCGTGCTAAAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTGCTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTA > SRR4302532.765967/1‑94 (MQ=60)
AAGCGTGCTAAAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTGCTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTA > SRR4302532.1472495/1‑94 (MQ=60)
AAGCGTGCTAAAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTGCTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTA > SRR4302532.6022744/1‑94 (MQ=60)
AAGCGTGCTAAAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTACTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTA < SRR4302532.3049039/94‑1 (MQ=60)
AGCGTGCTAAAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTACTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAA < SRR4302532.2325518/94‑1 (MQ=60)
AGCGTGCTAAAAATAACCGGAGATGTTTTGAATGACGATACGCGCGATCTGCAGCTACTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAA > SRR4302532.2773656/1‑94 (MQ=60)
CGTGCTAAAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTGCTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAAT > SRR4302532.5029550/1‑94 (MQ=60)
CGTGCTAAAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTACTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAAT < SRR4302532.1364358/94‑1 (MQ=60)
ggtCTAAAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTGCTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATC < SRR4302532.1540781/91‑1 (MQ=60)
GTGCTAAAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTGCTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATC > SRR4302532.2244599/1‑94 (MQ=60)
GTGCTAAAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTGCTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATC < SRR4302532.3501244/94‑1 (MQ=60)
GTGCTAAAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTGCTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATC > SRR4302532.1597353/1‑94 (MQ=60)
GTGCTAAAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTACTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATC < SRR4302532.4573376/94‑1 (MQ=60)
TGCTAAAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTACTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCA < SRR4302532.3201830/94‑1 (MQ=60)
GCTAAAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTGCTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCAT < SRR4302532.672771/94‑1 (MQ=60)
GCTAAAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTACTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCAT > SRR4302532.4490241/1‑94 (MQ=60)
GCTAAAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTACTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCAT > SRR4302532.667447/1‑94 (MQ=60)
GCGAAAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTGCTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCAT < SRR4302532.3519398/94‑1 (MQ=60)
CTAAAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTGCTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCATG > SRR4302532.5970599/1‑94 (MQ=60)
CTAAAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTGCTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCATG > SRR4302532.158067/1‑94 (MQ=60)
CTAAAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTGCTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCATG < SRR4302532.3743752/94‑1 (MQ=60)
CTAAAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTGCTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCATG < SRR4302532.3925082/94‑1 (MQ=60)
CTAAAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTACTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCATG > SRR4302532.4040608/1‑94 (MQ=60)
CTAAAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTACTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCATG < SRR4302532.505111/94‑1 (MQ=60)
CTAAAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTACTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCATG < SRR4302532.3167187/94‑1 (MQ=60)
TAAAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTGCTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCATGT < SRR4302532.526595/94‑1 (MQ=60)
TAAAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTGCTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCATGT > SRR4302532.82263/1‑94 (MQ=60)
TAAAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTACTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCATGT < SRR4302532.2381123/94‑1 (MQ=60)
TAAAACTAACCGGGGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTGCTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCATGA > SRR4302532.5587013/1‑94 (MQ=60)
AAAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTACTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCATGTA > SRR4302532.1384913/1‑94 (MQ=60)
AAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTGCTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCATGTAG < SRR4302532.1353275/94‑1 (MQ=60)
AAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTGCTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCATGTAG < SRR4302532.6227607/94‑1 (MQ=60)
AAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTGCTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCATGTAG > SRR4302532.3670189/1‑94 (MQ=60)
AAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTGCTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCATGTAG < SRR4302532.39974/94‑1 (MQ=60)
AACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTGCTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCATGTAGA > SRR4302532.1437738/1‑94 (MQ=60)
AACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTACTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCATGTAGA > SRR4302532.3970261/1‑94 (MQ=60)
ACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTACTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCATGTAGAA > SRR4302532.4281644/1‑94 (MQ=60)
ACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTACTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCATGTAGAA < SRR4302532.5894763/94‑1 (MQ=60)
ACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTACTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCATGTAGAA < SRR4302532.4243554/94‑1 (MQ=60)
CTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTGCTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCATGTAGAAG < SRR4302532.5272029/94‑1 (MQ=60)
CTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTACTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCATGTAGAAG > SRR4302532.2120293/1‑94 (MQ=60)
CTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTACTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCATGTAGAAG < SRR4302532.6121385/94‑1 (MQ=60)
TAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTACTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCATGTAGAAGC > SRR4302532.4751674/1‑94 (MQ=60)
AACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTGCTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCATGTAGAAGCG < SRR4302532.4615095/94‑1 (MQ=60)
AACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTACTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCATGTAGAAGCG < SRR4302532.3874164/94‑1 (MQ=60)
ACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTGCTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCATGTAGAAGCGT > SRR4302532.3697365/1‑94 (MQ=60)
GGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTGCTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCATGTAGAAGCGTTAT < SRR4302532.5239875/94‑1 (MQ=60)
GGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTGCTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCATGTAGAAGCGTTAT < SRR4302532.454075/94‑1 (MQ=60)
GGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTGCTGCCCATTGCCGGACGCATGAAATGTGCTCATGTAAATCATGTAGAAGCGTTAT < SRR4302532.5696055/94‑1 (MQ=60)
GTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTGCTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCATGTAGAAGCGTTATG > SRR4302532.2723041/1‑94 (MQ=60)
GTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTACTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCATGTAGAAGCGTTATG < SRR4302532.2119869/94‑1 (MQ=60)
GTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTACTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCATGTAGAAGCGTTATG < SRR4302532.5279681/94‑1 (MQ=60)
TGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTGCTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCATGTAGAAGCGTTATGC > SRR4302532.3656784/1‑94 (MQ=60)
TGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTACTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCATGTAGAAGCGTTATGC > SRR4302532.4269347/1‑94 (MQ=60)
GATGTTTTGAATGACGATCCGCGCGATCTGCAGCTACTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCATGTAGAAGCGTTATGCG < SRR4302532.3680468/94‑1 (MQ=60)
GATGTTTTGAATGACGATCCGCGCGATCTGCAGCTACTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCATGTAGAAGCGTTATGCG < SRR4302532.4818579/94‑1 (MQ=60)
GATGTTTTGAATGACGATCCGCGCGATCTGCAGCTACTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCATGTAGAAGCGTTATGCG < SRR4302532.4818580/94‑1 (MQ=60)
ATGTTTTGAATGACGATCCGCGCGATCTGCAGCTGCTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCATGTAGAAGCGTTATGCGA > SRR4302532.5565507/1‑94 (MQ=60)
GTTTTGAATGACGATCCGCGCGATCTGCAGCTGCTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCATGTAGAAGCGTTATGCGACG > SRR4302532.1592549/1‑94 (MQ=60)
GTTTTGAATGACGATCCGCGCGATCTGCAGCTGCTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCATGTAGAAGCGTTATGCGACG > SRR4302532.2233212/1‑94 (MQ=60)
GTTTTGAATGACGATCCGCGCGATCTGCAGCTACTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAACTCATGTAGAAGCGTTATGCGACG > SRR4302532.557157/1‑94 (MQ=60)
GTTTTGAATGACGATCCGCGCGATCTGCAGCTACTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCATGTAGAAGCGTTATGCGACG > SRR4302532.3256251/1‑94 (MQ=60)
TTGAATGACGATCCGCGCGATCTGCAGCTGCTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCATGTAGAAGCGTTATGCGACGCGG < SRR4302532.3273005/94‑1 (MQ=60)
TTGAATGACGATCCGCGCGATCTGCAGCTGCTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCATGTAGAAGCGTTATGCGACGCGG < SRR4302532.1180663/94‑1 (MQ=60)
TGAATGACGATCCGCGCGATCTGCAGCTACTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCATGTAGAAGCGTTATGCGACGCGGA > SRR4302532.732336/1‑94 (MQ=60)
GAATGACGATCCGCGCGATCTGCAGCTACTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCATGTAGAAGCGTTATGCGACGCGGAA < SRR4302532.3631425/94‑1 (MQ=60)
AATGACGATCCGCGCGATCTGCAGCTGCTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCATGTAGAAGCGTTATGCGACGCGGAAG > SRR4302532.3053534/1‑94 (MQ=60)
AATGACGATCCGCGCGATCTGCAGCTACTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCATGTAGAAGCGTTATGCGACGCGGAAG > SRR4302532.3556375/1‑94 (MQ=60)
ATGACGATCCGCGCGATCTGCAGCTACTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCATGTAGAAGCGTTATGCGACGCGGAAGA > SRR4302532.5294170/1‑94 (MQ=60)
ATGACGATCCGCGCGATCTGCAGCTACTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCATGTAGAAGCGTTATGCGACGCGGAAGA < SRR4302532.3852972/94‑1 (MQ=60)
aggCGATCCGCGCGATCGGCAGCTACTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCATGTAGAAGCGTTATGCGACGCGGAAGAC < SRR4302532.5229407/91‑1 (MQ=60)
TGACGATCCGCGCGATCTGCAGCTGCTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCATGTAGAAGCGTTATGCGACGCGGAAGAC < SRR4302532.3791330/94‑1 (MQ=60)
TGACGATCCGCGCGATCTGCAGCTACTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCATGTAGAAGCGTTATGCGACGCGGAAGAC > SRR4302532.1774007/1‑94 (MQ=60)
TGACGATCCGCGCGATCTGCAGCTACTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCATGTAGAAGCGTTATGCGACGCGGAAGAC < SRR4302532.2253823/94‑1 (MQ=60)
TGACGATCCGCGCGATCTGCAGCTACTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCATGTAGAAGCGTTATGCGACGCGGAAGAC < SRR4302532.3084902/94‑1 (MQ=60)
GACGATCCGCGCGATCTGCAGCTGCTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCATGTAGAAGCGTTATGCGACGCGGAAGACG > SRR4302532.298151/1‑94 (MQ=60)
ACGATCCGCGCGATCTGCAGCTACTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCATGTAGAAGCGTTATGCGACGCGGAAGACGT < SRR4302532.3296181/94‑1 (MQ=60)
CGATCCGCGCGATCTGCAGCTGCTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCATGTAGAAGCGTTATGCGACGCGGAAGACGTG > SRR4302532.3942090/1‑94 (MQ=60)
CGATCCGCGCGATCTGCAGCTACTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCATGTAGAAGCGTTATGCGACGCGGAAGACGTG < SRR4302532.1576919/94‑1 (MQ=60)
GATCCGCGCGATCTGCAGCTACTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCATGTAGAAGCGTTATGCGACGCGGAAGACGTGC > SRR4302532.2750931/1‑94 (MQ=60)
ATCCGCGCGATCTGCAGCTACTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCATGTAGAAGCGTTATGCGACGCGGAAGACGTGCT < SRR4302532.3081353/94‑1 (MQ=60)
CCGCGCGATCTGCAGCTGCTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCATGTAGAAGCGTTATGCGACGCGGAAGACGTGCTGG > SRR4302532.2903993/1‑94 (MQ=60)
CCGCGCGATCTGCAGCTACTGCCCATTGCCGGACGCCTGAGATGTGCTCATGTAAATCATGTAGAAGCGTTATGCGACGCGGAAGACGTGCTGG < SRR4302532.269731/94‑1 (MQ=60)
CCGCGCGATCTGCAGCTACTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCATGTAGAAGCGTTATGCGACGCGGAAGACGTGCTGG < SRR4302532.5795728/94‑1 (MQ=60)
CGCGCGATCTGCAGCTACTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCATGTAGAAGCGTTATGCGACGCGGAAGACGTGCTGGT < SRR4302532.5235103/94‑1 (MQ=60)
GCTCGATTTGCTGCTACTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAAGCATGTAGAAGCGGTATGCGACGCGGAATACGTGCTGGTG > SRR4302532.5654290/1‑94 (MQ=60)
GCGCGATCTGCAGCTACTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCATGTAGAAGCGTTATGCGACGCGGAAGACGTGCTGGTG > SRR4302532.1132713/1‑94 (MQ=60)
CGCGATCTGCAGCTGCTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCATGTAGAAGCGTTATGCGACACGGAAGACGTGCTGGTGT > SRR4302532.2622746/1‑94 (MQ=60)
CGCGATCTGCAGCTGCTGCCCATTGCCGGACGCCTGAAATCTGCTCATGTAAATCATGTAGAAGCGTTATGCGACGCGGAAGACGTGCTGGTGT > SRR4302532.257340/1‑94 (MQ=60)
CGCGATCTGCAGCTACTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCATGTAGAAGCGTTATGCGACGCGGAAGACGTGCTGGTGT > SRR4302532.2398634/1‑94 (MQ=60)
GCGATCTGCAGCTGCTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCATGTAGAAGCGTTATGCGACGCGGAAGACGTTCTGGTGTG < SRR4302532.6240460/94‑1 (MQ=60)
GCGATCTGCAGCTGCTGCCCATTGCCGGACGCCTGAAAGGTGCTCATGTAAATCATGTAGAAGCGTTATGCGACGCGGAAGACGTGCTGGTGTG < SRR4302532.6028363/94‑1 (MQ=60)
GCGATCTGCAGCTACTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCATGTAGAAGCGTTATGCGACGCGGAAGACGTGCTGGTGTG < SRR4302532.5588979/94‑1 (MQ=60)
CGATCTGCAGCTGCTGCCCAATGCCGGACGCCTGAAATGTGCTCATGTAAATCATGTAGAAGCGTTATGCCATGCGGGAGACGGGCTGGGGTGG > SRR4302532.1018383/1‑94 (MQ=60)
CGATATGCAGCTACTAACCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCATGTAGAAGCGTTATGCGACGCGGAAGACGAGCTGGaaaag < SRR4302532.5675280/94‑6 (MQ=60)
GATCTGCAGCTACTGCCCATTGCCGGACGCCTGAAATTTGCTCATGTCAATCATGTAGAAGCGTTATGCGACGCGGAAGACGTGCTGGTGTGGC > SRR4302532.4302943/1‑94 (MQ=60)
GATCTGCAGCTACTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCATGTAGAAGCGTTATGCGACGCGGAAGACGTGCTGGTGTGGT < SRR4302532.274142/94‑1 (MQ=60)
CAGCTGCTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCATGTAGAAGCGTTATGCGACGCGGAAGACGTGCTGGTGTGGTCCGTGG > SRR4302532.1240875/1‑94 (MQ=60)
CAGCTACTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCATGTAGAAGCGTTATGCGACGCGGAAGACGTGCTGGTGTGGTCCGTGG > SRR4302532.2759941/1‑94 (MQ=60)
AGCTGCTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCATGTAGAAGCGTTATGCGACGCGGAAGACGTGCTGGTGTGGTCCGTGGC > SRR4302532.2320999/1‑94 (MQ=60)
AGCTACTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCATGTAGAAGCGTTATGCGACGCGGAAGACGTGCTGGTGTGGTCCGTGGC < SRR4302532.3958875/94‑1 (MQ=60)
GCTACTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCATGTAGAAGCGTTATGCGACGCGGAAGACGTGCTGGTGTGGTCCGTGGCG < SRR4302532.139968/94‑1 (MQ=60)
TGCTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCATGTAGAAGCGTTATGCGACGCGGAAGACGTGCTGGTGTGGTCCGTGGCGGT < SRR4302532.4167814/94‑1 (MQ=60)
TACTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCATGTAGAAGCGTTATGCGACGCGGAAGACGTGCTGGTGTGGTCCGTGGCGGT > SRR4302532.744140/1‑94 (MQ=60)
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TAACGAAGCGCGGGCGCAGCTCATCACGCTGCGCCGAAGCGTGCTAAAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTGCTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCATGTAGAAGCGTTATGCGACGCGGAAGACGTGCTGGTGTGGTCCGTGGCGGT > NC_000913/3891920‑3892105
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
