Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
521 |
238.2 |
12299412 |
96.0% |
11807435 |
93.0 |
Breseq alignment
N/A
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCACCGATTGCCGCCAGACCCATCATCACAGCG > NC_000913/3918593‑3918779
|
CATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGA > SRR4302532.4372479/1‑94 (MQ=60)
ATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGTT > SRR4302532.125076/1‑94 (MQ=60)
ATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGTT > SRR4302532.3597652/1‑94 (MQ=60)
ATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGAT < SRR4302532.547949/94‑1 (MQ=60)
TCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATC < SRR4302532.5143137/94‑1 (MQ=60)
CACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGTTCA > SRR4302532.1514145/1‑94 (MQ=60)
CACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCA < SRR4302532.2492084/94‑1 (MQ=60)
ACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGTTCAG < SRR4302532.3339736/94‑1 (MQ=60)
ACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGTTCAG < SRR4302532.4883415/94‑1 (MQ=60)
ACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAG < SRR4302532.2332884/94‑1 (MQ=60)
ACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAG > SRR4302532.3246170/1‑94 (MQ=60)
CGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGTTCAGG < SRR4302532.2473568/94‑1 (MQ=60)
CGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGG < SRR4302532.6021895/94‑1 (MQ=60)
CGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGG < SRR4302532.389270/94‑1 (MQ=60)
GTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGTTCAGGT > SRR4302532.654627/1‑94 (MQ=60)
GTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGT > SRR4302532.982922/1‑94 (MQ=60)
GTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGT > SRR4302532.5065631/1‑94 (MQ=60)
TACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACTCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGTTCAGGTT > SRR4302532.1568700/1‑94 (MQ=60)
TACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGTTCAGGTT < SRR4302532.3698069/94‑1 (MQ=60)
TACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTT < SRR4302532.1666856/94‑1 (MQ=60)
TACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTT < SRR4302532.176831/94‑1 (MQ=60)
ACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGTTCAGGTTG < SRR4302532.1368126/94‑1 (MQ=60)
ACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGTTCAGGTTG > SRR4302532.3403972/1‑94 (MQ=60)
ACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTG < SRR4302532.957263/94‑1 (MQ=60)
CAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGTTCAGGTTGA > SRR4302532.3824449/1‑94 (MQ=60)
CAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGCTCAGGTTGA > SRR4302532.1895248/1‑94 (MQ=60)
AGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGTTCAGGTTGAC > SRR4302532.5030238/1‑94 (MQ=60)
AGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGTTCAGGTTGAC < SRR4302532.3510262/94‑1 (MQ=60)
AGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGAC > SRR4302532.1150971/1‑94 (MQ=60)
AGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGAC < SRR4302532.429609/94‑1 (MQ=60)
AGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGAC > SRR4302532.5588805/1‑94 (MQ=60)
GACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGTTCAGGTTGACG < SRR4302532.4965233/94‑1 (MQ=60)
GACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGTTCAGGTTGACG < SRR4302532.4784909/94‑1 (MQ=60)
CCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGTTCAGGTTGACGCG > SRR4302532.2922489/1‑94 (MQ=60)
CCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCG > SRR4302532.2994445/1‑94 (MQ=60)
CCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGTTCAGGTTGACGCGC > SRR4302532.1931882/1‑94 (MQ=60)
CCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGC > SRR4302532.1476764/1‑94 (MQ=60)
CCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGC > SRR4302532.4690870/1‑94 (MQ=60)
CAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGATGAATCAGTTCAGGTTGACGCGCT > SRR4302532.3616950/1‑94 (MQ=60)
GACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGTTCAGGTTGACGCGCTGC > SRR4302532.3324592/1‑94 (MQ=60)
GACCTACAGCGATCATCGGAATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGC < SRR4302532.1657360/94‑1 (MQ=60)
gcctacaggcATCATCGGGATAACATCCCCCAGGCCCAAAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCG < SRR4302532.5272263/84‑1 (MQ=60)
ACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGTTCAGGTTGACGCGCTGCG > SRR4302532.508868/1‑94 (MQ=60)
ACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGTTCAGGTTGACGCGCTGCG < SRR4302532.5738514/94‑1 (MQ=60)
ACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGTTCAGGTTGACGCGCTGCG < SRR4302532.5738515/94‑1 (MQ=60)
CTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGTTCAGGTTGACGCGCTGCGCC > SRR4302532.6149476/1‑94 (MQ=60)
CTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGTTCAGGTTGACGCGCTGCGCC < SRR4302532.2659410/94‑1 (MQ=60)
CTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCC > SRR4302532.1644121/1‑94 (MQ=60)
TACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGTTCAGGTTGACGCGCTGCGCCT < SRR4302532.1364935/94‑1 (MQ=60)
ACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTT < SRR4302532.2063942/94‑1 (MQ=60)
CAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGTTCAGGTTGACGCGCTGCGCCTTC < SRR4302532.4579002/94‑1 (MQ=60)
CAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGTTCAGGTTGACGCGCTGCGCCTTC < SRR4302532.1780485/94‑1 (MQ=60)
AGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCC < SRR4302532.3950103/94‑1 (MQ=60)
GCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGTTCAGGTTGACGCGCTGCGCCTTCCA > SRR4302532.688979/1‑94 (MQ=60)
GCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGTTCAGGTTGACGCGCTGCGCCTTCCA > SRR4302532.2935442/1‑94 (MQ=60)
GCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGTTCAGGTTGACGCGCTGCGCCTTCCA < SRR4302532.2252429/94‑1 (MQ=60)
CGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGTTCAGGTTGACGCGCTGCGCCTTCCAG > SRR4302532.1854908/1‑94 (MQ=60)
CGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAG > SRR4302532.3765268/1‑94 (MQ=60)
GATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGTTCAGGTTGACGCGCTGCGCCTTCCAGG < SRR4302532.5873628/94‑1 (MQ=60)
GATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGG < SRR4302532.3283477/94‑1 (MQ=60)
GATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGG > SRR4302532.2188215/1‑94 (MQ=60)
ATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGTTCAGGTTGACGCGCTGCGCCTTCCAGGA > SRR4302532.6214564/1‑94 (MQ=60)
TCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAA > SRR4302532.4255105/1‑94 (MQ=60)
CATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGTTCAGGTTGACGCGCTGCGCCTTCCAGGAAT < SRR4302532.3489909/94‑1 (MQ=60)
CATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAAT > SRR4302532.4729362/1‑94 (MQ=60)
ATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGTTCAGGCTGACGCGCTGCGCCTTCCAGGAATT > SRR4302532.3961743/1‑94 (MQ=60)
ATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATT > SRR4302532.1011207/1‑94 (MQ=60)
CGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGTTCAGGTTGACGCGCTGCGCCTTCCAGGAATTTA < SRR4302532.3588580/94‑1 (MQ=60)
GGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTAC < SRR4302532.4681275/94‑1 (MQ=60)
GGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTAC > SRR4302532.2595071/1‑94 (MQ=60)
GGATAGCATCCACCAGACCCATAACTATAAAGAACTGAGTACGCAGCAGAGGAATCAGTTCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACC < SRR4302532.2154766/94‑1 (MQ=60)
TAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCC > SRR4302532.1130271/1‑94 (MQ=60)
TAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCC > SRR4302532.2612894/1‑94 (MQ=60)
AGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCG > SRR4302532.1834492/1‑94 (MQ=60)
CATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGTTCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAG < SRR4302532.5539734/94‑1 (MQ=60)
CATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGTTCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAG > SRR4302532.2429679/1‑94 (MQ=60)
CATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAG > SRR4302532.1479036/1‑94 (MQ=60)
ATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGTTCAGGTTGACGCGCTGTGCCTTCCAGGAATTTACCCCCGAGG > SRR4302532.5202526/1‑94 (MQ=60)
ATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACGCCCGAGG > SRR4302532.3214227/1‑94 (MQ=60)
ATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGG > SRR4302532.4423676/1‑94 (MQ=60)
TCCACCAGACCCATAACGATAAAGCACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGA > SRR4302532.3555380/1‑94 (MQ=60)
CCACCAGACCCATAACGATAAAGAACTGAGTACGCGGCAGAGGAATCAGATCAGGTGGACGCGCTGCGCCTTCCAGGAATTTTCCCCCGAGGAT < SRR4302532.4678059/94‑1 (MQ=60)
CCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGTTCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGAT > SRR4302532.4320565/1‑94 (MQ=60)
CCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGTTCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGAT < SRR4302532.4351577/94‑1 (MQ=60)
CCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGTTCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGAT > SRR4302532.3048597/1‑94 (MQ=60)
CCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGTTCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGAT < SRR4302532.4722639/94‑1 (MQ=60)
CCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGAT < SRR4302532.3111600/94‑1 (MQ=60)
CACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGTTCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATG > SRR4302532.2779550/1‑94 (MQ=60)
CACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATG < SRR4302532.6141176/94‑1 (MQ=60)
CACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATG > SRR4302532.1474655/1‑94 (MQ=60)
ACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGC > SRR4302532.5490355/1‑94 (MQ=60)
CCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGTTCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCC < SRR4302532.1736687/94‑1 (MQ=60)
CCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCC < SRR4302532.2167364/94‑1 (MQ=60)
CCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCC < SRR4302532.6014902/94‑1 (MQ=60)
CCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCC > SRR4302532.1983440/1‑94 (MQ=60)
AGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGTTCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGA < SRR4302532.1863055/94‑1 (MQ=60)
GACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGAT > SRR4302532.5351712/1‑94 (MQ=60)
ACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGTTCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATA > SRR4302532.5527434/1‑94 (MQ=60)
CCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGTTCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACC < SRR4302532.4600874/94‑1 (MQ=60)
CATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGTTCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCG < SRR4302532.697128/94‑1 (MQ=60)
CATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCG > SRR4302532.5191270/1‑94 (MQ=60)
ATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGA > SRR4302532.3031537/1‑94 (MQ=60)
AACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGTTCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATC > SRR4302532.4525727/1‑94 (MQ=60)
AACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGTTCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATC > SRR4302532.4882273/1‑94 (MQ=60)
AACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGTTCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATC < SRR4302532.49763/94‑1 (MQ=60)
AACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATC < SRR4302532.1888578/94‑1 (MQ=60)
AACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATC > SRR4302532.1369533/1‑94 (MQ=60)
ACGATAAAGAGCTGAGTACGCAGCAGAGGAATCAGTTCAGGTTGCCGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCG < SRR4302532.735177/94‑1 (MQ=60)
CGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGC < SRR4302532.2279415/94‑1 (MQ=60)
GATAAAGAACTGAGTACGCAGCAGAGGAATCAGTTCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCA > SRR4302532.3315544/1‑94 (MQ=60)
GATAAAGAACTGAGTACGCAGCAGAGGAATCAGTTCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCA > SRR4302532.3951172/1‑94 (MQ=60)
GATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCA > SRR4302532.5367665/1‑94 (MQ=60)
ATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAG > SRR4302532.6333363/1‑94 (MQ=60)
TAAAGAACTGAGTACGCAGCAGAGGAATCAGTTCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGC > SRR4302532.722497/1‑94 (MQ=60)
TAAAGAACTGAGTACGCAGCAGAGGAATCAGTTCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGC < SRR4302532.4536747/94‑1 (MQ=60)
AAAGAACTGAGTACGCAGCAGAGGAATCAGTTCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCA > SRR4302532.6245151/1‑94 (MQ=60)
AAGAACTGAGTACGCAGCAGAGGAATCAGTTCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCAC > SRR4302532.4545084/1‑94 (MQ=60)
AGAACTGAGTACGCAGCAGAGGAATCAGTTCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCACC < SRR4302532.6035761/94‑1 (MQ=60)
AGAACTGAGTACGCAGCAGAGGAATCAGTTCAGGTTGACGCGCTGCCGCTTCCAGGAATTTACCCCCGACGACGCCGATCCCGGCCGCAGCACC > SRR4302532.2619328/1‑94 (MQ=60)
AGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCACC < SRR4302532.116878/94‑1 (MQ=60)
GAACTGAGTACGCAGCAGAGGAATCAGTTCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCACCG > SRR4302532.5351851/1‑94 (MQ=60)
ACTGAGTACGCAGCAGAGGAATCAGTTCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCACCGAT > SRR4302532.4570311/1‑94 (MQ=60)
ACTGAGTACGCAGCAGAGGAATCAGTTCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCACCGAT > SRR4302532.952701/1‑94 (MQ=60)
ACTGAGTACGCAGCAGAGGAATCAGTTCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCAGATACCGATCGCAGCACCGAT > SRR4302532.4570312/1‑94 (MQ=60)
CTGAGTACGCAGCAGAGGAATCAGTTCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCACCGATT < SRR4302532.3091218/94‑1 (MQ=60)
TGAGTACGCAGCAGAGGAATCAGTTCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCACCGATTG < SRR4302532.6247120/94‑1 (MQ=60)
AGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCACCGATTGCC < SRR4302532.2541271/94‑1 (MQ=60)
AGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCACCGATTGCC > SRR4302532.1384215/1‑94 (MQ=60)
GTACGCAGCAGAGGAATCAGTTCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCACCGATTGCCG < SRR4302532.1414481/94‑1 (MQ=60)
TACGCAGCAGAGGAATCAGTTCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCACCGATTGCCGC > SRR4302532.1834318/1‑94 (MQ=60)
GCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCACCGATTGCCGCCAG > SRR4302532.6176033/1‑94 (MQ=60)
GCAGCAGAGAAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCACCGATTGCCGCCAG < SRR4302532.1420566/94‑1 (MQ=60)
GCAGCAGAGAAAACACATCAGGTTTACGCGTTCAGCCTTACAGGAATTTTCCCCCGAGGATGCCGATACCGATCGCAGCACCGATTGCCGCCAG < SRR4302532.4043999/94‑1 (MQ=55)
AGCAGAGGAATCAGTTCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCACCGATTGCCGCCAGAC > SRR4302532.5994003/1‑94 (MQ=60)
CAGAGGAATCAGTTCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCACCGATTGCCACCAGACAC > SRR4302532.5382092/1‑94 (MQ=60)
CAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCACCGATTGCCGCCAGACCC > SRR4302532.3974361/1‑94 (MQ=60)
CAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCACCGATTGCCGCCAGACCC > SRR4302532.2017430/1‑94 (MQ=60)
AGAGGAATCAGTTCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCACCGATTGCCGCCAGACCCA > SRR4302532.2700083/1‑94 (MQ=60)
AGAGGAATCAGTTCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCACCGATTGCCGCCAGACCCA > SRR4302532.713161/1‑94 (MQ=60)
AGAGGAATCAGTTCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCACCGATTGCCGCCAGACCCA > SRR4302532.1895281/1‑94 (MQ=60)
AGAGGAATCAGTTCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCACCGATTGCCGCCAGACCCA < SRR4302532.5217549/94‑1 (MQ=60)
AGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCACCGATTGCCGCCAGACCCA > SRR4302532.3059985/1‑94 (MQ=60)
AGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCACCGATTGCCGCCAGACCCA > SRR4302532.1624970/1‑94 (MQ=60)
GAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCACCGATTGCCGCCAGACCCAT < SRR4302532.624673/94‑1 (MQ=60)
AGGAATCAGTTCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGCGGATGCCGATACCGATCGCAGCACCGATTGCCGCCAGACCCATC > SRR4302532.2513757/1‑94 (MQ=60)
AGGAATCAGTTCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCACCGATTGCCGCCAGACCCATC > SRR4302532.1027301/1‑94 (MQ=60)
AGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCACCGATTGCCGCCAGACCCATC < SRR4302532.4188532/94‑1 (MQ=60)
GGAATCAGTTCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCACCGATTGCCGCCAGACCCATCA > SRR4302532.485747/1‑94 (MQ=60)
GGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCACCGATTGCCGCCAGACCCATCA > SRR4302532.5404883/1‑94 (MQ=60)
GGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCACCGATTGCCGCCAGACCCATCA < SRR4302532.2752442/94‑1 (MQ=60)
GGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCACCGATTGCCGCCAGACCCATCA > SRR4302532.3484776/1‑94 (MQ=60)
GGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCACCGATTGCCGCCAGACCCATCA > SRR4302532.3484775/1‑94 (MQ=60)
ATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCACCGATTGCCGCCAGACCCATCATCA < SRR4302532.2716628/94‑1 (MQ=60)
TCAGTTCAGGTTGACGCGCCGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGAGCGCAGCACCGATTGCCGCCAGACCCATCATCAC > SRR4302532.1981001/1‑94 (MQ=60)
CAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCACCGATTGCCGCCAGACCCATCATCACA > SRR4302532.5943156/1‑94 (MQ=60)
CAGATCAGGTTGACGCGCGGCGCCTTCCAGGAATTTCCCCCCGAGGATGCCGATACCGATCGCAGCACCGATTGCCGCCAGACCCATCATCACA < SRR4302532.3101248/94‑1 (MQ=60)
AGTTCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCACCGATTGCCGCCAGACCCATCATCACAG > SRR4302532.3956309/1‑94 (MQ=60)
AGTTCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCACCGATTGCCGCCAGACCCATCATCACAG > SRR4302532.4418684/1‑94 (MQ=60)
GATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCACCGATTGCCGCCAGACCCATCATCACAGC > SRR4302532.4536714/1‑94 (MQ=60)
GATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCACCGATTGCCGCCAGACCCATCATCACAGC > SRR4302532.4536715/1‑94 (MQ=60)
GATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCACCGATTGCCGCCAGACCCATCATCACAGC > SRR4302532.217922/1‑94 (MQ=60)
ATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCACCGATTGCCGCCAGACCCATCATCACAGCG < SRR4302532.173579/94‑1 (MQ=60)
ATCAGGGTGACGCACTGCGTCTTCCAGGAATTTACCCCCGAGGATACCGATACCGATCGCAGTACCGGTTTCCGCCAGACCCATCATCACAGCG > SRR4302532.3214058/1‑94 (MQ=60)
|
CATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCACCGATTGCCGCCAGACCCATCATCACAGCG > NC_000913/3918593‑3918779
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
