Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
521 |
238.2 |
12299412 |
96.0% |
11807435 |
93.0 |
Breseq alignment
N/A
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGACTTCCGGCTGTGCGGGTTTCGCCGCTTTTGCCTGCTCCAGTTCCTGAGTGATTTGTTTGCTATCGGGGGCCGTCGC‑GGCGTACG‑CC‑CCCCAACTGAGGCACCAGGCCATCAGAAAAGTGATAATCAGGCGCACGTCAGCGTTTCCTTTGATGGATTAGACCTGGTCTTTTTTGTCGTCAACCA > NC_000913/4386813‑4386998
|
CGACTTCCGGCTGTGCGGGTTTCGCCGCTTTTGCCTGCTCCAGTTCCTGAGTGATTTGTTTGCTATCGGGGGCCGTCGC‑GGCGTACG‑CC‑CCCCC < SRR4302532.327119/94‑1 (MQ=60)
GACTTCCGGCTGTGCGGGTTTCGCCGCTTTTGCCTGCTCCAGTTCCTGAGTGATTTGTTTGCTATCGGGGGCCGTCGC‑GGCGTACG‑CC‑CCCCAC > SRR4302532.4931795/1‑94 (MQ=60)
ACTTCCGGCTGTGCGGGTTTCGCCGCTTTTGCCTGCTCCAGTTCCTGAGTGATTTGTTTGCTATCGGGGGCCGTCGC‑GGCGTACG‑CC‑CCCCcaa > SRR4302532.5692759/1‑91 (MQ=60)
CTTCCGGCTGTGCGGGTTTCGCCGCTTTTGCCTGCTCCAGTTCCTGAGTGATTTGTTTGCTATCGGGGGCCGTCGC‑GGCGTACG‑CC‑CCCCACCT > SRR4302532.527983/1‑94 (MQ=60)
TTCCGGCTGTGCGGGTTTCGCCGCTTTTGCCTGCTCCAGTTCCTGAGTGATTTGTTTGCTATCGGGGGCCGTCGC‑GGCGTACGCCC‑CCCCAACT < SRR4302532.4233823/94‑1 (MQ=60)
TTCCGGCTGTGCGGGTTTCGCCGCTTTTGCCTGCTCCAGTTCCTGAGTGATTTGTTTGCTATCGGGGGCCGTCGC‑GGCGTACGCCC‑CCCCAACT > SRR4302532.1055508/1‑94 (MQ=60)
TTCCGGCTGTGCGGGTTTCGCCGCTTTTGCCTGCTCCAGTTCCTGAGTGATTTGTTTGCTATCGGGGGCCGTCGC‑GGCGTACG‑CC‑CCCCAACTG > SRR4302532.2311266/1‑94 (MQ=60)
CCGGCTGTGCGGGTTTCGCCGCTTTTGCCTGCTCCAGTTCCTGAGTGATTTGTTTGCTATCGGGGGCCGTCGC‑GGCGTACG‑CCTCCCCAACTGA > SRR4302532.2704851/1‑94 (MQ=60)
CCGGCTGTGCGGGTTTCGCCGCTTTTGCCTGCTCCAGTTCCTGAGTGATTTGTTTGCTATCGGGGGCCGTCGC‑GGCGTACG‑CC‑CCCCAACTGAG < SRR4302532.1073898/94‑1 (MQ=60)
CGGCTGTGCGGGTTTCGCCGCTTTTGCCTGCTCCAGTTCCTGAGTGATTTGTTTGCTATCGGGGGCCGTCGC‑GGCGTACG‑CC‑CCCCAACTGAGG < SRR4302532.3405385/94‑1 (MQ=60)
AGGCTGTGCGGGTTTCGCCGCTTTTCCCTGCTCCAGTTCCTGAGTGATTTGTTTGCTATCGGGGGCCGTCGC‑GGCGTACGCCC‑CCCCAACTGAG < SRR4302532.732774/94‑1 (MQ=60)
GGCTGTGCGGGTTTCGCCGCTTTTGCCTGCTCCAGTTCCTGAGTGATTTGTTTGCTATCGGGGGCCGTCGC‑GGCGTACGCCC‑CCCCAACTGAGG > SRR4302532.6066823/1‑94 (MQ=60)
GCTGTGCGGGTTTCGCCGCTTTTGCCTGCTCCAGTTCCTGAGTGATTTGTTTGCTATCGGGGGCCGTCGC‑GGCGTACGCCC‑CCCCAACTGAGGC > SRR4302532.112335/1‑94 (MQ=60)
TGCGCGGGTTTCGCCGCTTTTGCCTGCTCCAGTTCCTGAGTGGTTTGTTTGCTATCAGGGGCCGTGGC‑GTCGTACG‑CC‑CCCCGACTGAGGCACC > SRR4302532.3317966/1‑94 (MQ=60)
CGTGCGGGTTTCGCCGCTTTTGCCTGCTCCAGTTCCTGAGTGATTTGTTTGCTATCGGGGGCCGTCGC‑GGCGTACG‑CC‑CCCCAACTGAGGCACC < SRR4302532.5510725/94‑1 (MQ=60)
TGCGGGTTTCGCCGCTTTTGCCTGCTCCAGTTCCTGAGTGATTTGTTTGCTATCGGGGGCCGTCGC‑GGCGTACG‑CC‑CCCCAACTGAGGCACCAG < SRR4302532.1130859/94‑1 (MQ=60)
GCGGGTTTCGCCGCTTTTGCCTGCTCCAGTTCCTGAGTGATTTGTTTGCTATCGGGGGCCGTCGC‑GGCGTACG‑CC‑CCCCAACTGAGGCACCAGG < SRR4302532.5629937/94‑1 (MQ=60)
CGGGTTTCGCCGCTTTTGCCTGCTCCAGTTCCTGAGTGATTTGTTTGCTATCGGGGGCCGTCGC‑GGCGTACGCCC‑CCCCAACTGAGGCACCAGG < SRR4302532.2930644/94‑1 (MQ=60)
CGGGTTTCGCCGCTTTTGCCTGCTCCAGTTCCTGAGTGATTTGTTTGCTATCGGGGGCCGTCGC‑GGCGTACG‑CC‑CCCCAACTGAGGCACCAGGC > SRR4302532.254583/1‑94 (MQ=60)
GGGTTTCGCCGCTTTTGCCTGCTCCAGTTCCTGAGTGATTTGTTTGCTATCGGGGGCCGTCGC‑GGCGTACG‑CC‑CCCCAACTGAGGCACCAGGCC < SRR4302532.1412997/94‑1 (MQ=60)
GGTTTCGCCGCTTTTGCCTGCTCCAGTTCCTGAGTGATTTGTTTGCTATCGGGGGCCGTCGC‑GGCGTACG‑CC‑CCCCAACTGAGGCACCAGGCCA < SRR4302532.1585439/94‑1 (MQ=60)
TTTCGCCGCTTTTGCCTGCTCCAGTTCCTGAGTGATTTGTTTGCTATCGGGGGCCGTCGC‑GGCGTACGCCC‑CCCCAACTGAGGCACCAGGCCAT < SRR4302532.707513/94‑1 (MQ=60)
TTTCGCCGCTTTTGCCTGCTCCAGTTCCTGAGTGATTTGTTTGCTATCGGGGGCCGTCGC‑GGCGTACG‑CC‑CCCCAACTGAGGCACCAGGCCATC < SRR4302532.455583/94‑1 (MQ=60)
TTCGCCGCTTTTGCCTGCTCCAGTTCCTGAGTGATTTGTTTGCTATCGGGGGCCGTCGC‑GGCGTACGCCC‑CCCCAACTGAGGCACCAGGCCATC < SRR4302532.769017/94‑1 (MQ=60)
TTCGCCGCTTTTGCCTGCTCCAGTTCCTGAGTGATTTGTTTGCTATCGGGGGCCGTCGC‑GGCGTACG‑CC‑CCCCAACTGAGGCACCAGGCCATCA < SRR4302532.4587650/94‑1 (MQ=60)
TCGCCGCTTTTGCCTGCTCCAGTTCCTGAGTGATTTGTTTGCTATCGGGGGCCGTCGC‑GGCGTACGCCC‑CCCCAACTGAGGCACCAGGCCATCA > SRR4302532.4616503/1‑94 (MQ=60)
TCGCCGCTTTTGCCTGCTCCAGTTCCTGAGTGATTTGTTTGCTATCGGGGGCCGTCGC‑GGCGTACGCCC‑CCCCAACTGAGGCACCAGGCCATCA > SRR4302532.4616502/1‑94 (MQ=60)
GCCGCTTTTGCCTGCTCCAGTTCCTGAGTGATTTGTTTGCTATCGGGGGCCGTCGC‑GGCGTACGCCC‑CCCCAACTGAGGCACCAGGCCATCAGA < SRR4302532.1142792/94‑1 (MQ=60)
GCCGCTTTTGCCTGCTCCAGTTCCTGAGTGATTTGTTTGCTATCGGGGGCCGTCGC‑GGCGTACG‑CC‑CCCCAACTGAGGCACCAGGCCATCAGAA > SRR4302532.3542208/1‑94 (MQ=60)
CCGCTTTTGCCTGCTCCAGTTCCTGAGTGATTTGTTTGCTATCGGGGGCCGTCGC‑GGCGTACGCCC‑CCCCAACTGAGGCACCAGGCCATCAGAA > SRR4302532.4875964/1‑94 (MQ=60)
CCGCTTTTGCCTGCTCCAGTTCCTGAGTGATTTGTTTGCTATCGGGGGCCGTCGC‑GGCGTACGCCC‑CCCCAACTGAGGCACCAGGCCATCAGAA > SRR4302532.2768667/1‑94 (MQ=60)
CGCTTTTGCCTGCTCCAGTTCCTGAGTGATTTGTTTGCTATCGGGGGCCGTCGC‑GGCGTACGCCC‑CCCCAACTGAGGCACCAGGCCATCAGAAA > SRR4302532.3326967/1‑94 (MQ=60)
CTTTTGCCTGCTCCAGTTCCTGAGTGATTTGTTTGCTATCGGGGGCCGTCGC‑GGCGTACG‑CC‑CCCCAACTGAGGCACCAGGCCATCAGAAAAGT < SRR4302532.1980672/94‑1 (MQ=60)
TTGCCTGCTCCAGTTCCTGAGTGATTTGTTTGCTATCGGGGGCCGTCGC‑GGCGTACG‑CC‑CCCCAACTGAGGCACCAGGCCATCAGAAAAGTGAT < SRR4302532.2366356/94‑1 (MQ=60)
TGCCTGCTCCAGTTCCTGAGTGATTTGTTTGCTATCGGGGGCCGTCGC‑GGCGTACGCCC‑CCCCAACTGAGGCACCAGGCCATCAGAAAAGTGAT < SRR4302532.5705334/94‑1 (MQ=60)
TCCTGCTCCAGTTGCTGAGTGATTTGTTTGCTATCGGGGGCCGTCGC‑GGCGTACGCCC‑CCCCAACTGAGGCACCAGGCCATCAGAAAAGTGATA < SRR4302532.3158523/94‑1 (MQ=60)
GCCTGCTCCAGTTCCTGAGTGATTTGTTTGCTATCGGGGGCCGTCGC‑GGCGTACGCCC‑CCCCAACTGAGGCACCAGGCCATCAGAAAAGTGATA < SRR4302532.3158522/94‑1 (MQ=60)
GCCTGCTCCAGTTCCTGAGTGATTTGTTTGCTATCGGGGGCCGTCGC‑GGCGTACG‑CC‑CCCCAACTGAGGCACCAGGCCATCAGAAAAGTGATAA < SRR4302532.5552871/94‑1 (MQ=60)
GCCTGCTCCAGTTCCTGAGTGATTTGTTTGCTATCGGGGGCCGTCGC‑GGCGTACG‑CC‑CCCCAACTGAGGCACCAGGCCATCAGAAAAGTGATAA < SRR4302532.5366850/94‑1 (MQ=60)
CCTGCTCCAGTTCCTGAGTGATTTGTTTGCTATCGGGGGCCGTCGC‑GGCGTACGCCC‑CCCCAACTGAGGCACCAGGCCATCAGAAAAGTGATAA > SRR4302532.3284283/1‑94 (MQ=60)
CTGCTCCAGTTCCTGAGTGATTTGTTTGCTATCGGGGGCCGTCGC‑GGCGTACG‑CC‑CCCCAACTGAGGCACCAGGCCATCAGAAAAGTGATAATC < SRR4302532.5861759/94‑1 (MQ=60)
TGCTCCAGTTCCTGAGTGATTTGTTTGCTATCGGGGGCCGTCGC‑GGCGTACGCCC‑CCCCAACTGAGGCACCAGGCCATCAGAAAAGTGATAATC > SRR4302532.1715002/1‑94 (MQ=60)
CTCCAGTTCCTGAGTGATTTGTTTGCTATCGGGGGCCGTCGC‑GGCGTACGCCC‑CCCCAACTGAGGCACCAGGCCATCAGAAAAGTGATAATCAG > SRR4302532.694442/1‑94 (MQ=60)
CTCCAGTTCCTGAGTGATTTGTTTGCTATCGGGGGCCGTCGC‑GGCGTACGCCC‑CCCCAACTGAGGCACCAGGCCATCAGAAAAGTGATAATCAG < SRR4302532.5566863/94‑1 (MQ=60)
TCCAGTTCCTGAGTGATTTGTTTGCTATCGGGGGCCGTCGC‑GGCGTACGCCC‑CCCCAACTGAGGCACCAGGCCATCAGAAAAGTGATAATCAGG > SRR4302532.139028/1‑94 (MQ=60)
TCCAGTTCCTGAGTGATTTGTTTGCTATCGGGGGCCGTCGC‑GGCGTACGCCC‑CCCCAACTGAGGCACCAGGCCATCAGAAAAGTGATAATCAGG > SRR4302532.3394436/1‑94 (MQ=60)
CCAGTTCCTGAGAGATTTGTTTGCTATCGGGGGCCGTCGC‑GGCGTTCGCCC‑CCCCAACTGAGGCACCAGGCCATCAGAAAAGGGATAATCAGGC > SRR4302532.5127579/1‑94 (MQ=60)
CAGTTCCTGAGTGATTTGTTTGCTATCGGGGGCCGTCGC‑GGCGTACG‑CC‑CCCCAACTGAGGCACCAGGCCATCAGAAAAGTGATAATCAGGCGC > SRR4302532.5761144/1‑94 (MQ=60)
AGTTCCTGAGTGATTTGTTTGCTATCGGGGGCCGTCGC‑GGCGTACGCCC‑CCCCAACTGAGGCACCAGGCCATCAGAAAAGTGATAATCAGGCGC > SRR4302532.4145222/1‑94 (MQ=60)
GTTCCTGAGTGATTTGTTTGCTATCGGGGGCCGTTGA‑GGCGTACGCCC‑CCCCAACTGAGGCACCAGGCCATCAGAAAAGGGATAATCAGGagcc > SRR4302532.5475198/1‑90 (MQ=60)
TTCCTGAGTGATTTGTTTGCTATCGGGGGCCGTCGC‑GGCGTACGCCC‑CCCCAACTGAGGCACCAGGCCATCAGAAAAGTGATAATCAGGCGCAC > SRR4302532.205037/1‑94 (MQ=60)
TTCCTGAGTGATTTGTTTGCTATCGGGGCCCGTCGC‑GGCGTACGCCC‑CCCCAACTGAGGCACCAGGCCATCAGAAAAGTGATAATCAGGCGCAC < SRR4302532.1272393/94‑1 (MQ=60)
TCCTGAGTGATTTGTTTGCTATCGGGGGCCGTCGC‑GGCGTACGCCC‑CCCCAACTGAGGCACCAGGCCATCAGAAAAGTGATAATCAGGCGCACG < SRR4302532.759924/94‑1 (MQ=60)
CTGAGTGATTTGTTTGCTATCGGGGGCCGTCGC‑GGCGTACG‑CC‑CCCCAACTGAGGCACCAGGCCATCAGAAAAGTGATAATCAGGCGCACGTCA > SRR4302532.3156671/1‑94 (MQ=60)
TGAGTGATTTGTTTGCTATCGGGGGCCGTCGC‑GGCGTACGCCC‑CCCCAACTGAGGCACCAGGCCATCAGAAAAGTGATAATCAGGCGCACGTCA > SRR4302532.684532/1‑94 (MQ=60)
TGAGTGATTTGTTTGCTATCGGGGGCCGTCGC‑GGCGTACGCCC‑CCCCAACTGAGGCACCAGGCCATCAGAAAAGTGATAATCAGGCGCACGTCA > SRR4302532.3049366/1‑94 (MQ=60)
TGAGTGATTTGTTTGCTATCGGGGGCCGTCGC‑GGCGTACG‑CC‑CCCCAACTGAGGCACCAGGCCATCAGAAAAGTGATAATCAGGCGCACGTCAG > SRR4302532.5252556/1‑94 (MQ=60)
AGTGATTTGTTTGCTATCGGGGGCCGTCGC‑GGCGTACGCCC‑CCCCAACTGAGGCACCAGGCCATCAGAAAAGTGATAATCAGGCGCACGTCAGC < SRR4302532.4079190/94‑1 (MQ=60)
GTGATTTGTTTGCTATCGGGGGCCGTCGC‑GGCGTACGCCC‑CCCCAACTGAGGCACCAGGCCATCAGAAAAGTGATAATCAGGCGCACGTCAGCG < SRR4302532.2085090/94‑1 (MQ=60)
TGATTTGTTTGCTATCGGGGGCCGTCGC‑GGCGTACG‑CC‑CCCCAACTGAGGCACCAGGCCATCAGAAAAGTGATAATCAGGCGCACGTCAGCGTT < SRR4302532.507708/94‑1 (MQ=60)
GATTTGTTTGCTATCGGGGGCCGTCGC‑GGCGTACGCCC‑CCCCAACTGAGGCACCAGGCCATCAGAAAAGTGATAATCAGGCGCACGTCAGCGTT < SRR4302532.1694169/94‑1 (MQ=60)
ATTTGTTTGCTATCGGGGGCCGTCGC‑GGCGTACGCCC‑CCCCAACTGAGGCACCAGGCCATCAGAAAAGTGATAATCAGGCGCACGTCAGCGTTT > SRR4302532.3254170/1‑94 (MQ=60)
ATTTGCTTGCTATCGGGGGCCCGCGC‑GGCGTACGCCC‑CCCCAACTCAGGCGCCACCCCATCAGAAAAGTGATAATCAGGCGCACGTCAGCGTTT > SRR4302532.4375002/1‑94 (MQ=57)
TTTGTTTGCTATCGGGGGCCGTCGC‑GGCGTACGCCC‑CCCCAACTGAGGCACCAGGCCATCAGAAAAGTGATAATCAGGCGCACGTCAGCGTTTC > SRR4302532.655945/1‑94 (MQ=60)
TGTTTGCTATCGGGGGCCGTCGC‑GGCGTACGCCC‑CCCCAACTGAGGCACCAGGCCATCAGAAAAGTGATAATCAGGCGCACGTCAGCGTTTCCT < SRR4302532.1392389/94‑1 (MQ=60)
TGTTTGCTATCGGGGGCCGTCGC‑GGCGTACGCCC‑CCCCAACTGAGGCACCAGGCCATCAGAAAAGTGATAATCAGGCGCACGTCAGCGTTTCCT > SRR4302532.6258430/1‑94 (MQ=60)
GTTTGCTATCGGGGGCCGTCGC‑GGCGTAGG‑CC‑CCCCAACTGAGGGACCAGGCCATCAGAAAAGTGTTAATCAGGCGCACGTCAGCGTTTCCTTT > SRR4302532.3580242/1‑94 (MQ=60)
GTTTGCTATCGGGGCCCGTCGC‑GGCTTACG‑CC‑CCCCAACTGAGGCACCAGTCCATCAGAAAAGTGATAATCAGGCGCACGTCAGCGTTTCCTTT < SRR4302532.3905944/94‑1 (MQ=60)
TTTGCTATCGGGGGCCGTCGC‑GGCGTACGCCC‑CCCCAACTGAGGCACCAGGCCATCAGAAAAGTGATAATCAGGCGCACGTCAGCGTTTCCTTT < SRR4302532.2042878/94‑1 (MQ=60)
TTTGCTATCGGGGGCCGTCGC‑GGCGTACGCCC‑CCCCAACTGAGGCACCAGGCCATCAGAAAAGTGATAATCAGGCGCACGTCAGCGTTTCCTTT < SRR4302532.1812092/94‑1 (MQ=60)
TTGCTATCGGGGGCCGTCGC‑GGCGTACGCCC‑CCCCAACTGAGGCACCAGGCCATCAGAAAAGTGATAATCAGGCGCACGTCAGCGTTTCCTTTG < SRR4302532.1236941/94‑1 (MQ=60)
TGCTATCGGGGTCCCTCGC‑GGCGTACGCCC‑CCCCAACAGAGGCACCAGGCCGTCAGAAAAGTGATAATCAGGCGCACGTCAGCGTTTCCTTTGA < SRR4302532.5302075/94‑1 (MQ=60)
TGCTATCGGGGGCCGTCGC‑GGCGTACGCCC‑CCCCAACTGAGGCACCAGGCCATCAGAAAAGTGATAATCAGGCGCACGTCAGCGTTTCCTTTGA < SRR4302532.5302074/94‑1 (MQ=60)
TGCTATCGGGGGCCGTCGC‑GGCGTACGCCC‑CCCCAACTGAGGCACCAGGCCATCAGAAAAGTGATAATCAGGCGCACGTCAGCGTTTCCTTTGA < SRR4302532.6167522/94‑1 (MQ=60)
TGCTATCGGGGGCCGTCGC‑GGCGTACG‑CC‑CCCCAACTGAGGCACCACGCCAACAGAAAAGTGATAATCAGGCGCACGTCAGCGTTTCCTTTGAT > SRR4302532.3890099/1‑94 (MQ=60)
GCTATCGGGGGCCGTCGC‑GGCGTACGCCC‑CCCCAACTGAGGCACCAGGCCATCAGAAAAGTGATAATCAGGCGCACGTCAGCGTTTCCTTTGAT < SRR4302532.1380256/94‑1 (MQ=60)
GCAATCGGGGGCCG‑CGCGGGCGTACG‑CC‑CCCCAACTGAGGCACGAGGCCATCAGAAAAGTGATAATCAGGCGCACGTCAGCGGTGCCTTCGATG < SRR4302532.3782900/94‑1 (MQ=60)
CTATCGGGGGCCGTCGC‑GGCGTACGCCC‑CCCCAACTGAGGCACCAGGCCATCAGAAAAGTGATAATCAGGCGCACGTCAGCGTTTCCTTTGATG < SRR4302532.161794/94‑1 (MQ=60)
CTATCGGGGGCCGTCGC‑GGCGTACGCCC‑CCCCAACTGAGGCACCAGGCCATCAGAAAAGTGATAATCAGGCGCACGTCAGCGTTTCCTTTGATG < SRR4302532.3199495/94‑1 (MQ=60)
TATCGGGGGCCGTCGC‑GGCGTACGCCC‑CCCCAACTGAGGCACCAGGCCATCAGAAAAGTGATAATCAGGCGCACGTCAGCGTTTCCTTTGATGG > SRR4302532.2245597/1‑94 (MQ=60)
ATCGGGGGCCGTCGC‑GGCGTACG‑CC‑CCCCAACTGAGGCACCAGGCCATCAGAAAAGTGATAATCAGGCGCACGTCAGCGTTTCCTTTGATGGAT > SRR4302532.2713463/1‑94 (MQ=60)
ATCGGGGGCCGTCGC‑GGCGTACG‑CC‑CCCCAACTGAGGCACCAGGCCATCAGAAAAGTGATAATCAGGCGCACGTCAGCGTTTCCTTTGATGGAT < SRR4302532.3264476/94‑1 (MQ=60)
TCGGGGGCCGTCGC‑GGCGTACG‑CC‑CCCCAACTGAGGCACCAGGCCATCAGAAAAGTGATAATCAGGCGCACGTCAGCGTTTCCTTTGATGGATT < SRR4302532.3589023/94‑1 (MQ=60)
GGGGGCCGTCGC‑GGCGTACGCCC‑CCCCAACTGAGGCACCAGGCCATCAGAAAAGTGATAATCAGGCGCACGTCAGCGTTTCCTTTGATGGATTA > SRR4302532.5526346/1‑94 (MQ=60)
GGGGGCCGTCGC‑GGCGTACGCCC‑CCCCAACTGAGGCACCAGGCCATCAGAAAAGTGATAATCAGGCGCACGTCAGCGTTTCCTTTGATGGATTA < SRR4302532.2525274/94‑1 (MQ=60)
GGGGGCCGTCGC‑GGCGTACGCCC‑CCCCAACTGAGGCACCAGGCCATCAGAAAAGTGATAATCAGGCGCACGTCAGCGTTTCCTTTGATGGATTA > SRR4302532.1800282/1‑94 (MQ=60)
GGGGGCCGTCGC‑GGCGTACG‑CC‑CCCCAACTGAGGCACCAGGCCATCAGAAAAGTGATAATCAGGCGCACGTCAGCGTTTCCTTTGATGGATTAG < SRR4302532.997097/94‑1 (MQ=60)
cggcgctgtcgctgcggACG‑CC‑CCCGAGCTGAGGCTCCAGTCCATCAGAAAAGTGATAATCAGGCGCACGGCAGCGTTTCCTTTGATGGATTAG < SRR4302532.2910605/77‑1 (MQ=60)
GACCGTCGC‑GGCGTACG‑CC‑CCCCACCTGCGGCACAGGGCCATCAGAAAGGTGTTAATCAGGCGCACGTCGGCGTTTCCTTTGATGGATTAGACC < SRR4302532.5685913/94‑1 (MQ=60)
GCCGTCGC‑GGCGTACGCCC‑CCCCAACTGAGGCACCAGGCCATCAGAAAAGTGATAATCAGGCGCACGTCAGCGTTTCCTTTGATGGATTAGACC < SRR4302532.5240733/94‑1 (MQ=60)
CGTCGC‑GGCGTACGCCC‑CCCCAACTGAGGCACCAGGCCATCAGAAAAGTGATAATCAGGCGCACGTCAGCGTTTCCTTTGATGGATTAGACCTG > SRR4302532.5403202/1‑94 (MQ=60)
CGTCGC‑GGCGTACGCCC‑CCCCAACTGAGGCACCAGGCCATCAGAAAAGTGATAATCAGGCGCACGTCAGCGTTTCCTTTGATGGATTAGACCTG > SRR4302532.4532611/1‑94 (MQ=60)
CGTCGC‑GGCGTACG‑CC‑CCCCAACTGAGGCACCAGGCCATCAGAAAAGTGATAATCAGGCGCACGTCAGCGTTTCCTTTGATGGATTAGACCTGG > SRR4302532.3301978/1‑94 (MQ=60)
CGTCGC‑GGCGTACG‑CC‑CCCCAACTGAGGCACCAGGCCATCAGAAAAGTGATAATCAGGCGCACGTCAGCGTTTCCTTTGATGGATTAGACCTGG < SRR4302532.27206/94‑1 (MQ=60)
CGC‑GGCGTACG‑CC‑CCCCAACTGAGGCACCAGGCCATCAGAAAAGTGATAATCAGGCGCACGTCAGCGTTTCCTTTGATGGATTAGACCTGGTCT > SRR4302532.2595072/1‑94 (MQ=60)
GC‑GGCGTACG‑CC‑CCCCAACTGAGGCACCAGGCCATCAGAAAAGTTATAATCAGGCGCACGTCAGCGTTTCCTTTGATGGATTAGACCTGGTCTT < SRR4302532.3989097/94‑1 (MQ=60)
GC‑GGCGTACG‑CC‑CCCCAACTGAGGCACCAGGCCATCAGAAAAGTGATAATCAGGCGCACGTCAGCGTTTCCTTTGATGGATTAGACCTGGTCTT > SRR4302532.4206161/1‑94 (MQ=60)
GGCGTACGCCC‑CCCCAACTGAGGCACCAGGCCATCAGAAAAGTGATAATCAGGCGCACGTCAGCGTTTCCTTTGATGGATTAGACCTGGTCTTT < SRR4302532.1263913/94‑1 (MQ=60)
CGTACGCCC‑CCCCAACTGAGGCACCAGGCCATCAGAAAAGTGATAATCAGGCGCACGTCAGCGTTTCCTTTGATGGATTAGACCTGGTCTTTTT < SRR4302532.2931593/94‑1 (MQ=60)
GTACG‑CC‑CCCCAACTGAGGCACCAGGCCATCAGAAAAGTGATAATCAGGCGCACGTCAGCGTTTCCTTTGATGGATTAGACCTGGTCTTTTTTG < SRR4302532.1192370/94‑1 (MQ=60)
GTACG‑CC‑CCCCAACTGAGGCACCAGGCCATCAGAAAAGTGATAATCAGGCGCACGTCAGCGTTTCCTTTGATGGATTAGACCTGGTCTTTTTTG > SRR4302532.6069711/1‑94 (MQ=60)
TACGCCC‑CCCCAACTGAGGCACCAGGCCATCAGAAAAGTGATAATCAGGCGCACGTCAGCGTTTCCTTTGATGGATTAGACCTGGTCTTTTTTG < SRR4302532.119115/94‑1 (MQ=60)
cgcCC‑CCCCAACTGAGGCACCAGGCCATCAGAAAAGTGATAATCAGGCGCACGTCAGCGTTTCCTTTGATGGATTAGACCTGGTCTTTTTTGTC < SRR4302532.6100911/91‑1 (MQ=60)
gcCC‑CCCCAACTGAGGCACCAGGCCATCAGAAAAGTGATAATCAGGCGCACGTCAGCGTTTCCTTTGATGGATTAGACCTGGTCTTTTTTGTCG < SRR4302532.505675/92‑1 (MQ=60)
C‑CC‑CCCCAACTGAGGCACCAGGCCATCAGAAAAGTGATAATCAGGCGCACGTCAGCGTTTCCTTTGATGGATTAGACCTGGTCTTTTTTGTCGT > SRR4302532.5703225/1‑94 (MQ=60)
CC‑CCCCAACTGAGGCACCAGGCCATCAGAAAAGTGATAATCAGGCGCACGTCAGCGTTTCCTTTGATGGATTAGACCTGGTCTTTTTTGTCGTC > SRR4302532.5173053/1‑94 (MQ=60)
C‑GCCCAACGGAGGCACCAGGCCATCAGAAAAGTGATAATCAGGCGCACGTCAGCGTTTCCTTTGATGGATTAGACCTGGTCTTTTTTGTCGTCA > SRR4302532.3986369/1‑94 (MQ=60)
C‑CCCCAACTGAGGCACCAGGCCATCAGAAAAGTGATAATCAGGCGCACGTCAGCGTTTCCTTTGATGGATTAGACCTGGTCTTTTTTGTCGTCA > SRR4302532.5254282/1‑94 (MQ=60)
C‑CCCCAACTGAGGCACCAGGCCATCAGAAAAGTGATAATCAGGCGCACGTCAGCGTTTCCTTTGATGGATTAGACCTGGTCTTTTTTGTCGTCA > SRR4302532.4067524/1‑94 (MQ=60)
C‑CCCCAACTGAGGCACCAGGCCATCAGAAAAGTGATAATCAGGCGCACGTCAGCGTTTCCTTTGATGGATTAGACCTGGTCTTTTTTGTCGTCA < SRR4302532.1201788/94‑1 (MQ=60)
C‑CCCCAACTGAGGCACCAGGCCATCAGAAAAGTGATAATCAGGCGCACGTCAGCGTTTCCTTTGATGGATTAGACCTGGTCTTTTTTGTCGTCA < SRR4302532.5438255/94‑1 (MQ=60)
C‑CCCCAACTGAGGCACCAGGCCATCAGAAAAGTGATAATCAGGCGCACGTCAGCGTTTCCTTTGATGGATTAGACCTGGTCTTTTTTGTCGTCA > SRR4302532.5599371/1‑94 (MQ=60)
CCCCAACTGAGGCACCAGGCCATCAGAAAAGTGATAATCAGGCGCACGTCAGCGTTTCCTTTGATGGATTAGACCTGGTCTTTTTTGTCGTCAA < SRR4302532.6254892/94‑1 (MQ=60)
CAACTGAGGCACCAGGCCATCAGAAAAGTGATAATCAGGCGCACGTCAGCGTTTCCTTTGATGGATTAGACCTGGTCTTTTTTGTCGTCAACCA > SRR4302532.3293163/1‑94 (MQ=60)
CAACTGAGGCACCAGGCCATCAGAAAAGTGATAATCAGGCGCACGTCAGCGTTTCCTTTGATGGATTAGACCTGGTCTTTTTTGTCGTCAACCA > SRR4302532.5819835/1‑94 (MQ=60)
CAACTGAGGCACCAGGCCATCAGAAAAGTGATAATCAGGCGCACGTCAGCGTTTCCTTTGATGGATTAGACCTGGTCTTTTTTGTCGTCAACCA < SRR4302532.802500/94‑1 (MQ=60)
|
CGACTTCCGGCTGTGCGGGTTTCGCCGCTTTTGCCTGCTCCAGTTCCTGAGTGATTTGTTTGCTATCGGGGGCCGTCGC‑GGCGTACG‑CC‑CCCCAACTGAGGCACCAGGCCATCAGAAAAGTGATAATCAGGCGCACGTCAGCGTTTCCTTTGATGGATTAGACCTGGTCTTTTTTGTCGTCAACCA > NC_000913/4386813‑4386998
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
