Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
593 |
264.2 |
13311096 |
97.8% |
13018251 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,412,158 |
C→T |
T220T (ACG→ACA) |
recT ← |
recombinase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,412,158 | 0 | C | T | 83.4%
| 543.9
/ 76.9
| 201 | T220T (ACG→ACA) | recT | recombinase |
| Reads supporting (aligned to +/- strand): ref base C (18/15); new base T (89/77); total (108/93) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 |
Only 100 of 205 total aligned reads displayed.
GGATCGATTGTCAGTGGTTCCTTTTCATCCATTGATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCCGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAGGCTGCGCACCAGCTCAATCTGTTTGCG > NC_000913/1412066‑1412247
|
ggATCGATTGTCAGTGGTTCCTTTTCATCCATTGATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCAACGAATAGcc > 2:6217854/1‑93 (MQ=255)
aTCGATTGTCAGTGGTTCCTTTTCATCCATTGATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCCGt < 2:6200231/93‑1 (MQ=255)
tCGATTGTCAGTGGTTCCTTTTCATCCATTGATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGtt > 1:4096595/1‑93 (MQ=255)
tCGATTGTCAGTGGTTCCTTTTCATCCATTGATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGtt < 1:4729879/93‑1 (MQ=255)
tCGATTGTCAGTGGTTCCTTTTCATCCATTGATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGtt < 2:2364749/93‑1 (MQ=255)
tCGATTGTCAGTGGTTCCTTTTCATCCATTGATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGtt > 1:2294897/1‑93 (MQ=255)
tCGATTGTCAGTGGTTCCTTTTCATCCATTGATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCCGtt < 2:5526326/93‑1 (MQ=255)
cGATTGTCAGTGGTTCCTTTTCATCCATTGATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGttt > 1:3580655/1‑93 (MQ=255)
gATTGTCAGTGGTTCCTTTTCATCCATTGATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGtttt > 2:3086539/1‑93 (MQ=255)
gATTGTCAGTGGTTCCTTTTCATCCATTGATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGtttt > 1:2011683/1‑93 (MQ=255)
aTTGTCAGTGGTTCCTTTTCATCCATTGATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTc > 2:4082009/1‑93 (MQ=255)
aTTGTCAGTGGTTCCCTTTCATCCATTGATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCCGTTTTc > 2:73651/1‑93 (MQ=255)
ttGTCAGTGGTTCCTTTTCATCCATTGATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCt < 1:5430879/93‑1 (MQ=255)
ttGTCAGTGGTTCCTTTTCATCCATTGATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCCGTTTTCt > 2:259855/1‑93 (MQ=255)
gTCAGTGGTTCCTTTTCATCCATTGATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCttt > 1:2048859/1‑93 (MQ=255)
gTCAGTGGTTCCTTTTCATCCATTGATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCCGTTTTCttt < 1:3534689/93‑1 (MQ=255)
tCAGTGGTTCCTTTTCATCCATTGATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTg < 1:5574675/93‑1 (MQ=255)
tCAGTGGTTCCTTTTCATCCATTGATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTg > 1:6327918/1‑93 (MQ=255)
tCAGTGGTTCCTTTTCATCCATTGATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTg > 2:5642766/1‑93 (MQ=255)
aGTGGTTCCTTTTCATCCATTGATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGcc > 2:4106501/1‑93 (MQ=255)
aGTGGTTCCTTTTCATCCATTGATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGcc < 2:1610372/93‑1 (MQ=255)
tGGTTCCTTTTCATCCATTGATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCAt < 2:1041473/93‑1 (MQ=255)
ggTTCCTTTTCATCCATTGATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCCTTGCCAtt < 1:6485207/93‑1 (MQ=255)
gTTCCTTTTCATCCATTGATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCAttt > 2:3394507/1‑93 (MQ=255)
ttttCATCCATTGATACTGTACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTcc > 1:6454794/1‑93 (MQ=255)
ttCATCCATTGATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCa < 1:5698572/93‑1 (MQ=255)
cATCCATTGATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGt > 2:4560095/1‑93 (MQ=255)
aTCCATTGATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTg > 2:5177529/1‑93 (MQ=255)
tCCATTGATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGa < 2:371733/93‑1 (MQ=255)
tCCATTGATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGa < 1:535131/93‑1 (MQ=255)
ccATTGATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAg < 2:322675/93‑1 (MQ=255)
ccATTGATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCCGTTTTCTTTGCCATTTCTTCCCAGTGAg > 1:5064848/1‑93 (MQ=255)
cATTGATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGt > 2:4855582/1‑93 (MQ=255)
cATTGATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGt < 2:5933607/93‑1 (MQ=255)
cATTGATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGt > 1:6601096/1‑93 (MQ=255)
cATTGATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAATGAGt > 2:6488253/1‑93 (MQ=255)
aTTGATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGtt > 2:238292/1‑93 (MQ=255)
gATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTAcc < 2:2306766/93‑1 (MQ=255)
gATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCCGTTTTCTTTGCCATTTCTTCCCAGTGAGTTAcc > 1:6115551/1‑93 (MQ=255)
aTACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTAccc > 1:2786836/1‑93 (MQ=255)
tGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCAGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACgg < 1:5839142/93‑1 (MQ=255)
cGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCg > 2:5746221/1‑93 (MQ=255)
gCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGt < 2:2082786/93‑1 (MQ=255)
gCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCCGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACCGCCCGt > 1:3434616/1‑93 (MQ=255)
ggATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGttat > 2:6110329/1‑93 (MQ=255)
ggATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCCGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGttat > 2:4906119/1‑93 (MQ=255)
gATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGttatt < 1:1275180/93‑1 (MQ=255)
aTCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCCGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGttatta < 1:214143/93‑1 (MQ=255)
tctcAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTAc > 2:2578151/1‑93 (MQ=255)
ctcAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCCGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTAcc < 2:2550089/93‑1 (MQ=255)
tcAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCa < 2:2693723/93‑1 (MQ=255)
tcAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCa < 2:4153078/93‑1 (MQ=255)
tcAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCa > 1:3217834/1‑93 (MQ=255)
tcAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCa > 1:896276/1‑93 (MQ=255)
cAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAg > 2:2789155/1‑93 (MQ=255)
cAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAg > 1:5343600/1‑93 (MQ=255)
cAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAg > 1:5203980/1‑93 (MQ=255)
cAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCCGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAg > 2:1199132/1‑93 (MQ=255)
aaTTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGc > 1:181270/1‑93 (MQ=255)
aaTTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGc < 2:2825748/93‑1 (MQ=255)
ttGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCtt < 2:1873513/93‑1 (MQ=255)
ttGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCtt < 2:5481160/93‑1 (MQ=255)
gATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCCGCTTTa > 1:42755/1‑93 (MQ=255)
gATACGGGCAAATATTTGAACAGGCGACGAATAGCCGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTa > 2:4288062/1‑93 (MQ=255)
aTACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCtttgc < 1:2497793/93‑3 (MQ=255)
aCGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTc > 1:2031686/1‑93 (MQ=255)
cGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCa < 2:4821054/93‑1 (MQ=255)
cGGGCAAATATTTGAACAGGCGACGAATAGCCGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCa < 1:3868940/93‑1 (MQ=255)
gggCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAg > 1:5604627/1‑93 (MQ=255)
ggCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAgg < 1:6624670/93‑1 (MQ=255)
ggCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAgg > 1:1689722/1‑93 (MQ=255)
ggCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAgg > 1:5125137/1‑93 (MQ=255)
ggCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAgg < 1:2350209/93‑1 (MQ=255)
gCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAGGc < 1:3124205/93‑1 (MQ=255)
gCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAGGc > 1:5929357/1‑93 (MQ=255)
gCAAATATTTGAACAGGCGACGAATAGCCGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAGGc < 1:1602410/93‑1 (MQ=255)
aaaTATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAGGCTg > 1:6184078/1‑93 (MQ=255)
aaTATTTGAACAGGCGACGAATAGCCGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAGGCTgc > 1:6224085/1‑93 (MQ=255)
atatTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAGGCTgcg < 2:3656522/93‑1 (MQ=255)
tttGAACAGGCGACGAATAGCCGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAGGCTGCGCAc > 2:1884144/1‑93 (MQ=255)
ttGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAGGCTGCGCAcc < 1:4372061/93‑1 (MQ=255)
tGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAGGCTGCGCACCa < 1:6436427/93‑1 (MQ=255)
gAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAGGCTGCGCACCAg < 1:5730202/93‑1 (MQ=255)
gAACAGGCGACGAATAGCCGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTCTACTCAGGCTGCGCACCAg < 1:4160760/93‑1 (MQ=255)
cAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAGGCTGCGCACCAGCTc > 2:5296936/1‑93 (MQ=255)
aGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAGGCTGCGCACCAGCTCa > 2:3826858/1‑93 (MQ=255)
gCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAGGCTGCGCACCAGCTCAAt < 1:4974096/93‑1 (MQ=255)
gCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAGGCTGCGCACCAGCTCAAt < 1:1749576/93‑1 (MQ=255)
gCGACGAATAGCCGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAGGCTGCGCACCAGCTCAAt < 1:2642684/93‑1 (MQ=255)
gCGACGAATAGCCGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAGGCTGCGCACCAGCTCAAt < 1:2436112/93‑1 (MQ=255)
cgacgaATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAGGCTGCGCACCAGCTCAATc < 1:1017637/93‑1 (MQ=255)
gacgaATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAGGCTGCGCACCAGCTCAATCt > 1:4295553/1‑93 (MQ=255)
gaATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAGGCTGCGCACCAGCTCAATCTGtt < 2:4482566/93‑1 (MQ=255)
gaATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAGGCTGCGCACCAGCTCAATCTGtt > 1:5021079/1‑93 (MQ=255)
gaATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAGGCTGCGCACCAGCTCAATCTGtt > 1:953235/1‑93 (MQ=255)
aaTAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAGGCTGCGCACCAGCTCAATCTGttt > 1:1249158/1‑93 (MQ=255)
aaTAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAGGCTGCGCACCAGCTCAATCTGttt > 1:5226481/1‑93 (MQ=255)
aTAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAGGCTGCGCACCAGCTCAATCTGTTTg > 1:3786984/1‑93 (MQ=255)
tAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAGGCTGCGCACCAGCTCAATCTGTTTgc > 1:4607566/1‑93 (MQ=255)
aGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAGGCTGCGCACCAGCTCAATCTGTTTgcg > 1:1952158/1‑93 (MQ=255)
|
GGATCGATTGTCAGTGGTTCCTTTTCATCCATTGATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCCGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAGGCTGCGCACCAGCTCAATCTGTTTGCG > NC_000913/1412066‑1412247
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AGGATCGATTGTCAGTGGTTCCTTTTCATCCATTGATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCCGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAGGCTGCGCACCAGCTCAATCTGTTTGCGCGTC > NC_000913/1412065‑1412251
|
AGGATCGATTGTCAGTGGTTCCTTTTCATCCATTGATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCT > SRR4302547.5013951/1‑94 (MQ=60)
AGGATCGATTGTCAGTGGTTCCTTTTCATCCATTGATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCC > SRR4302547.3808185/1‑94 (MQ=60)
AGGATCGATTGTCAGTGGTTCCTTTTCATCCATTGATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCC > SRR4302547.1754933/1‑94 (MQ=60)
GGATCGATTGTCAGTGGTTCCTTTTCATCCATTGATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTG < SRR4302547.45927/94‑1 (MQ=60)
GGATCGATTGTCAGTGGTTCCTTTTCATCCATTGATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTG < SRR4302547.2579531/94‑1 (MQ=60)
GATCGATTGTCAGTGGTTCCTTTTCATCCATTGATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGT > SRR4302547.5254355/1‑94 (MQ=60)
ATCGATTGTCAGTGGTTCCTTTTCATCCATTGATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTT < SRR4302547.2087562/94‑1 (MQ=60)
ATCGATTGTCAGTGGTTCCTTTTCATCCATTGATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTT > SRR4302547.2341400/1‑94 (MQ=60)
ATCGATTGTCAGTGGTTCCTTTTCATCCATTGATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTT > SRR4302547.4179902/1‑94 (MQ=60)
TCGATTGTCAGTGGTTCCTTTTCATCCATTGATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGACTAGCTGTTT < SRR4302547.6640867/94‑1 (MQ=60)
TCGATTGTCAGTGGTTCCTTTTCATCCATTGATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTT > SRR4302547.3653703/1‑94 (MQ=60)
TCGATTGTCAGTGGTTCCTTTTCATCCATTGATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTT < SRR4302547.4827906/94‑1 (MQ=60)
TCGATTGTCAGTGGTTCCTTTTCATCCATTGATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTT > SRR4302547.1203645/1‑94 (MQ=60)
CGATTGTCAGTGGTTCCTTTTCATCCATTGATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTT > SRR4302547.2051712/1‑94 (MQ=60)
ATTGTCAGTGGTTCCTTTTCATCCATTGATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCT > SRR4302547.5073055/1‑94 (MQ=60)
ATTGTCAGTGGTTCCTTTTCATCCATTGATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCT > SRR4302547.5458640/1‑94 (MQ=60)
TTGTCAGTGGTTCCTTTTCATCCATTGATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTT < SRR4302547.5543161/94‑1 (MQ=60)
TTGTCAGTGGTTCCTTTTCATCCATTGATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCCGTTTTCTT > SRR4302547.5371127/1‑94 (MQ=60)
TGTCAGTGGTTCCTTTTCATCCATTGATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTT > SRR4302547.2089723/1‑94 (MQ=60)
GTCAGTGGTTCCTTTTCATCCATTGATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTG > SRR4302547.6459521/1‑94 (MQ=60)
GTCAGTGGTTCCTTTTCATCCATTGATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCCGTTTTCTTTG < SRR4302547.3606859/94‑1 (MQ=60)
TCAGTGGTTCCTTTTCATCCATTGATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGC < SRR4302547.5689620/94‑1 (MQ=60)
AGTGGTTCCTTTTCATCCATTGATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCA < SRR4302547.1592700/94‑1 (MQ=60)
AGTGGTTCCTTTTCATCCATTGATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCA < SRR4302547.5160780/94‑1 (MQ=60)
TGGTTCCTTTTCATCCATTGATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATT < SRR4302547.2431676/94‑1 (MQ=60)
GGTTCCTTTTCATCCATTGATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCCTTGCCATTT < SRR4302547.6620223/94‑1 (MQ=60)
GTTCCTTTTCATCCATTGATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTC < SRR4302547.6335741/94‑1 (MQ=60)
CTTTTCATCCATTGATACTGTACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCC > SRR4302547.6589246/1‑94 (MQ=60)
CTTTTCATCCATTGATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCC < SRR4302547.5592917/94‑1 (MQ=60)
TTTCATCCATTGATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCA < SRR4302547.4387301/94‑1 (MQ=60)
TTCATCCATTGATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAG < SRR4302547.2556195/94‑1 (MQ=60)
TTCATCCATTGATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAG < SRR4302547.5816272/94‑1 (MQ=60)
TCATCCATTGATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGT < SRR4302547.2104591/94‑1 (MQ=60)
CATCCATTGATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTG > SRR4302547.5499171/1‑94 (MQ=60)
ATCCATTGATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGA < SRR4302547.2301137/94‑1 (MQ=60)
TCCATTGATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAG < SRR4302547.544801/94‑1 (MQ=60)
TCCATTGATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCCGTTTTCTTTGCCATTTCTTCCCAGTGAG > SRR4302547.5169364/1‑94 (MQ=60)
CCATTGATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGT > SRR4302547.6291102/1‑94 (MQ=60)
CCATTGATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGT > SRR4302547.6738499/1‑94 (MQ=60)
CCATTGATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGA < SRR4302547.6587413/94‑1 (MQ=60)
TTGATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTAC < SRR4302547.5202240/94‑1 (MQ=60)
TGATACTGCACGCTGGATCTCAATTTATACGGGCAAATATTTGAACAGGCGACGAATAGCCGGTTTCTTTGCCATTTCTTCCCAGTGAGTTACC > SRR4302547.5910046/1‑94 (MQ=60)
TGATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACC > SRR4302547.5845907/1‑94 (MQ=60)
TGATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCCGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACC > SRR4302547.6242410/1‑94 (MQ=60)
GATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCC > SRR4302547.2842657/1‑94 (MQ=60)
GATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCC > SRR4302547.364357/1‑94 (MQ=60)
ATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCA > SRR4302547.640753/1‑94 (MQ=60)
CTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGG > SRR4302547.3082413/1‑94 (MQ=60)
CTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGG < SRR4302547.5706432/94‑1 (MQ=60)
CTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGG < SRR4302547.2371435/94‑1 (MQ=60)
TGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCAGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGC < SRR4302547.5959959/94‑1 (MQ=60)
CGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCCGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACCGCCCGT > SRR4302547.3504624/1‑94 (MQ=60)
CCGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCCCGGCCCGTTA < SRR4302547.3420185/94‑1 (MQ=60)
GGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATT < SRR4302547.3484544/94‑1 (MQ=60)
GGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGCTATT > SRR4302547.1019122/1‑94 (MQ=60)
GATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTA < SRR4302547.1300864/94‑1 (MQ=60)
ATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCCGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTAC < SRR4302547.218186/94‑1 (MQ=60)
CTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCA > SRR4302547.3282020/1‑94 (MQ=60)
CTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCA > SRR4302547.913516/1‑94 (MQ=60)
TCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAG > SRR4302547.5311068/1‑94 (MQ=60)
TCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAG > SRR4302547.5453762/1‑94 (MQ=60)
TCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAG > SRR4302547.5534516/1‑94 (MQ=60)
CAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGC > SRR4302547.4092850/1‑94 (MQ=60)
CAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGC < SRR4302547.1704790/94‑1 (MQ=60)
CAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGC > SRR4302547.184673/1‑94 (MQ=60)
TGATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCCGCTTTA > SRR4302547.43539/1‑94 (MQ=60)
GATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTAC < SRR4302547.4475658/94‑1 (MQ=60)
ATACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTGCT < SRR4302547.2548254/94‑1 (MQ=60)
TACGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTC > SRR4302547.2072151/1‑94 (MQ=60)
CGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAG > SRR4302547.6185997/1‑94 (MQ=60)
CGGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAG > SRR4302547.5720252/1‑94 (MQ=60)
CGGGCAAATATTTGAACAGGCGACGAATAGCCGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAG < SRR4302547.3947701/94‑1 (MQ=60)
GGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAGG > SRR4302547.1722964/1‑94 (MQ=60)
GGGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAGG > SRR4302547.5230738/1‑94 (MQ=60)
GGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAGGC > SRR4302547.6052279/1‑94 (MQ=60)
GGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAGGC < SRR4302547.6762575/94‑1 (MQ=60)
GGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAGGC < SRR4302547.2397836/94‑1 (MQ=60)
GGCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAGGC < SRR4302547.4189975/94‑1 (MQ=60)
GCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAGGCT < SRR4302547.3186178/94‑1 (MQ=60)
GCAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAGGCT < SRR4302547.2493940/94‑1 (MQ=60)
GCAAATATTTGAACAGGCGACGAATAGCCGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAGGCT < SRR4302547.1634194/94‑1 (MQ=60)
CAAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAGGCTG > SRR4302547.6312430/1‑94 (MQ=60)
CAAATATTTGAACAGGCGACGAATAGCCGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAGGCTG > SRR4302547.20682/1‑94 (MQ=60)
AAATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAGGCTGC > SRR4302547.435562/1‑94 (MQ=60)
AAATATTTGAACAGGCGACGAATAGCCGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAGGCTGC > SRR4302547.736432/1‑94 (MQ=60)
AAATATTTGAACAGGCGACGAATAGCCGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAGGCTGC > SRR4302547.6353355/1‑94 (MQ=60)
AATATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAGGCTGCG > SRR4302547.5727436/1‑94 (MQ=60)
ATTTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAGGCTGCGCAC > SRR4302547.4270131/1‑94 (MQ=60)
TTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAGGCTGCGCACCA < SRR4302547.3887522/94‑1 (MQ=60)
TTGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAGGCTGCGCACCA < SRR4302547.4461899/94‑1 (MQ=60)
TTGAACAGGCGACGAATAGCGGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAGGCTGCGCACCA > SRR4302547.3193408/1‑94 (MQ=60)
TGAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAGGCTGCGCACCAG < SRR4302547.6570575/94‑1 (MQ=60)
GAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTCCCCACGGCCCGTTATTACCAGCTTTACTCAGGCTGCGCACCAGC < SRR4302547.2823489/94‑1 (MQ=60)
GAACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAGGCTGCGCACCAGC < SRR4302547.5848586/94‑1 (MQ=60)
GAACAGGCGACGAATAGCCGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTCTACTCAGGCTGCGCACCAGC < SRR4302547.4245524/94‑1 (MQ=60)
ACAGGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTCAGTTACCCACAGACAGATACTACCAGCTTTACTCAGGCTGCGCACCAGATC > SRR4302547.5915147/1‑94 (MQ=60)
AGGCGACGAATAGCCGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAGGCTGCGCACCAGCTCAA > SRR4302547.6751814/1‑94 (MQ=60)
GGCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAGGCTGCGCACCAGCTCAAT < SRR4302547.1991/94‑1 (MQ=60)
GCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAGGCTGCGCACCAGCTCAATC < SRR4302547.5076991/94‑1 (MQ=60)
GCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAGGCTGCGCACCAGCTCAATC < SRR4302547.1784110/94‑1 (MQ=60)
GCGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAGGCTGCGCACCAGCTCAATC < SRR4302547.473824/94‑1 (MQ=60)
GCGACGAATAGCCGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAGGCTGCGCACCAGCTCAATC < SRR4302547.2485382/94‑1 (MQ=60)
GCGACGAATAGCCGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAGGCTGCGCACCAGCTCAATC < SRR4302547.2695869/94‑1 (MQ=60)
CGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAGGCTGCGCACCAGCTCAATCT < SRR4302547.1037571/94‑1 (MQ=60)
CGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAGGCTGCGCACCAGCTCAATCT > SRR4302547.1289341/1‑94 (MQ=60)
CGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAGGCTGCGCACCAGCTCAATCT > SRR4302547.4383866/1‑94 (MQ=60)
CGACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAGGCTGCGCACCAGCTCAATCT < SRR4302547.5331046/94‑1 (MQ=60)
GACGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAGGCTGCGCACCAGCTCAATCTG < SRR4302547.928454/94‑1 (MQ=60)
CGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAGGCTGCGCACCAGCTCAATCTGTT > SRR4302547.971751/1‑94 (MQ=60)
CGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAGGCTGCGCACCAGCTCAATCTGTT > SRR4302547.6510833/1‑94 (MQ=60)
CGAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAGGCTGCGCACCAGCTCAATCTGTT > SRR4302547.5124835/1‑94 (MQ=60)
GAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAGGCTGCGCACCAGCTCAATCTGTTT > SRR4302547.1274369/1‑94 (MQ=60)
GAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAGGCTGCGCACCAGCTCAATCTGTTT > SRR4302547.5334061/1‑94 (MQ=60)
GAATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAGGCTGCGCACCAGCTCAATCTGTTT > SRR4302547.1960275/1‑94 (MQ=60)
AATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAGGCTGCGCACCAGCTCAATCTGTTTG > SRR4302547.3864195/1‑94 (MQ=60)
AATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAGGCTGCGCACCAGCTCAATCTGTTTG > SRR4302547.3514265/1‑94 (MQ=60)
AATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAGGCTGAGCACCAGCTCAATCTGTTTG < SRR4302547.6597807/94‑1 (MQ=60)
AATAGCCGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAGGCTGCGCACCAGCTCAATCTGTTTG < SRR4302547.5090029/94‑1 (MQ=60)
ATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAGGCTGCGCACCAGCTCAATCTGTTTGC > SRR4302547.4702921/1‑94 (MQ=60)
ATAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAGGCTGCGCACCAGCTCAATCTGTTTGC > SRR4302547.6004113/1‑94 (MQ=60)
TAGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAGGCTGCGCACCAGCTCAATCTGTTTGCG > SRR4302547.1990879/1‑94 (MQ=60)
AGCTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAGGCTGCGCACCAGCTCAATCTGTTTGCGC < SRR4302547.1822349/94‑1 (MQ=60)
CTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAGGCTGCGCACCAGCTCAATCTGTTTGCGCGT < SRR4302547.4245722/94‑1 (MQ=60)
CTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAGGCTGCGCACCAGCTCAATCTGTTTGCGCGT > SRR4302547.5241331/1‑94 (MQ=60)
CTGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAGGCTGCGCACCAGCTCAATCTGTTTGCGCGT > SRR4302547.5755077/1‑94 (MQ=60)
CGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAGGCTGCGCACCAGCTCAATCTGTTTGCGCGTC > SRR4302547.460991/1‑94 (MQ=60)
|
AGGATCGATTGTCAGTGGTTCCTTTTCATCCATTGATACTGCACGCTGGATCTCAATTGATACGGGCAAATATTTGAACAGGCGACGAATAGCCGTTTTCTTTGCCATTTCTTCCCAGTGAGTTACCCACGGCCCGTTATTACCAGCTTTACTCAGGCTGCGCACCAGCTCAATCTGTTTGCGCGTC > NC_000913/1412065‑1412251
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
