Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
593 |
264.2 |
13311096 |
97.8% |
13018251 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,607,710 |
A→G |
L332P (CTT→CCT) |
uxaB ← |
altronate oxidoreductase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,607,710 | 0 | A | G | 100.0%
| 876.4
/ NA
| 237 | L332P (CTT→CCT) | uxaB | altronate oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (96/141); total (96/141) |
Only 100 of 239 total aligned reads displayed.
GAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAAGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTA > NC_000913/1607622‑1607799
|
gAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCaa < 1:6373468/93‑1 (MQ=255)
aGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCaaa < 1:197905/93‑1 (MQ=255)
cgcgATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATc < 1:905022/93‑1 (MQ=255)
gcgATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATcc < 2:4061880/93‑1 (MQ=255)
gcgATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATcc < 1:3015830/93‑1 (MQ=255)
gcgATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATcc < 2:2174825/93‑1 (MQ=255)
cgATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCa < 2:3698986/93‑1 (MQ=255)
gATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAg > 1:4664805/1‑93 (MQ=255)
gATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAg < 1:2304914/93‑1 (MQ=255)
gATAGACAGCAGCTGATGCTTAATGTACGGGTTACGACACCGCCCGGTGACTGCAATGGCGAAAGATTCCAATTCATCACGAGGCAAAACCAg < 1:6654712/93‑1 (MQ=255)
tAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTa > 2:2222580/1‑93 (MQ=255)
aGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTAc > 2:1526844/1‑93 (MQ=255)
aGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTAc < 2:192689/93‑1 (MQ=255)
gACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTAcc > 1:3843488/1‑93 (MQ=255)
aCAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCg < 1:175196/93‑1 (MQ=255)
cagcagCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCgg < 1:6223791/93‑1 (MQ=255)
agcagcTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGa < 1:3089471/93‑1 (MQ=255)
gcagcTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGaa > 2:2432396/1‑93 (MQ=255)
cagcTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGaat > 2:678019/1‑93 (MQ=255)
agcTGATGCTTAATGTACGGGTTACGGAAACGTCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGaata > 2:5457223/1‑93 (MQ=255)
agcTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGaata > 2:6459395/1‑93 (MQ=255)
agcTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGaata < 1:4147036/93‑1 (MQ=255)
gcTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGaataa > 2:6579940/1‑93 (MQ=255)
gcTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGaataa > 1:5911595/1‑93 (MQ=255)
gcTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGaataa < 1:5310298/93‑1 (MQ=255)
cTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGaataat < 1:5516955/93‑1 (MQ=255)
cTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGaataat > 2:3574655/1‑93 (MQ=255)
cTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGaataat > 1:4375171/1‑93 (MQ=255)
aTGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATttc > 1:3292862/1‑93 (MQ=255)
aTGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATttc < 2:3010716/93‑1 (MQ=255)
aTGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATttc < 1:3680789/93‑1 (MQ=255)
gCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATGATttctt < 2:5225200/93‑1 (MQ=255)
gCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATttctt < 2:5039895/93‑1 (MQ=255)
gCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATttctt < 1:518621/93‑1 (MQ=255)
cTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATttcttc < 2:2896424/93‑1 (MQ=255)
cTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATttcttc < 2:4723422/93‑1 (MQ=255)
cTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATttcttc < 2:4501508/93‑1 (MQ=255)
ttAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCg > 2:5882290/1‑93 (MQ=255)
ttAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCg > 1:1087479/1‑93 (MQ=255)
tGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGa < 2:6004948/93‑1 (MQ=255)
aCGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAg > 1:1872077/1‑93 (MQ=255)
cGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGc < 1:2470585/93‑1 (MQ=255)
gggTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCt < 1:6129418/93‑1 (MQ=255)
ggTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCtt < 2:1370295/93‑1 (MQ=255)
ggTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCtt < 1:6632362/93‑1 (MQ=255)
ttACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCtttt < 2:4982015/93‑1 (MQ=255)
ttACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCtttt > 1:4800427/1‑93 (MQ=255)
ttACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCtttt < 1:702217/93‑1 (MQ=255)
tACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCttttt < 1:1697062/93‑1 (MQ=255)
tACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCttttt < 1:4627977/93‑1 (MQ=255)
ggAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCaa < 1:3451568/93‑1 (MQ=255)
gAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAAc > 1:6481417/1‑93 (MQ=255)
gAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAAc > 2:319398/1‑93 (MQ=255)
gAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAAc > 2:1625996/1‑93 (MQ=255)
gAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAAc < 2:2620707/93‑1 (MQ=255)
aCGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGaa < 2:353085/93‑1 (MQ=255)
gCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATg < 2:1858430/93‑1 (MQ=255)
tGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCaaa < 1:6294651/93‑1 (MQ=255)
aCTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAGtt < 2:2798132/93‑1 (MQ=255)
cTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAAttt < 1:1386253/93‑1 (MQ=255)
gCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCa > 1:1617351/1‑93 (MQ=255)
gCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCa < 2:5385413/93‑1 (MQ=255)
cACTGGCGAAATATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTATTTCAACGAATGCGCAAATTTCAg > 1:3035536/1‑93 (MQ=255)
cTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCa < 2:1287272/93‑1 (MQ=255)
tGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGACTGCGCAAATTTCAGCAt > 2:2984947/1‑93 (MQ=255)
tGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCAt < 2:1993266/93‑1 (MQ=255)
tGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCAt < 1:501611/93‑1 (MQ=255)
tGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCAt < 2:3058667/93‑1 (MQ=255)
tGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCAt < 1:5715324/93‑1 (MQ=255)
ggCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATc > 1:392909/1‑93 (MQ=255)
gCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCg < 2:1688816/93‑1 (MQ=255)
gAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGtt > 1:1581026/1‑93 (MQ=255)
gAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGtt > 2:3962851/1‑93 (MQ=255)
aaaGATTCCAGTTCATCGCGAGGCAAATCCAGTACCGGAATAATTCCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTc < 1:5227441/93‑1 (MQ=255)
aaaGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTc > 2:3820513/1‑93 (MQ=255)
aaaGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTc < 1:3348460/93‑1 (MQ=255)
aaaGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTc < 1:2619128/93‑1 (MQ=255)
aaGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCa < 1:2548677/93‑1 (MQ=255)
aaGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCa > 2:3420710/1‑93 (MQ=255)
aaGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCa > 2:4527812/1‑93 (MQ=255)
aGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCAt > 1:3072822/1‑93 (MQ=255)
aGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCAt < 2:2163735/93‑1 (MQ=255)
aGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCAt > 2:5657499/1‑93 (MQ=255)
gATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATc > 1:5354602/1‑93 (MQ=255)
tCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCt > 2:4649290/1‑93 (MQ=255)
tCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCt > 1:2362687/1‑93 (MQ=255)
ccAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCtt < 1:4550208/93‑1 (MQ=255)
ccAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCtt < 1:5128398/93‑1 (MQ=255)
cAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTc > 2:656742/1‑93 (MQ=255)
aGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCa > 1:4047429/1‑93 (MQ=255)
gTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCAc < 2:6103293/93‑1 (MQ=255)
ttCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCAcc < 2:108079/93‑1 (MQ=255)
ttCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCAcc < 2:6597891/93‑1 (MQ=255)
catcaCGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTa > 1:204147/1‑93 (MQ=255)
catcaCGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTa < 1:2870775/93‑1 (MQ=255)
catcaCGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTa < 1:2128213/93‑1 (MQ=255)
tcaCGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACg > 2:5839809/1‑93 (MQ=255)
tcaCGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACg > 2:4309008/1‑93 (MQ=255)
caCGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACgg > 1:429542/1‑93 (MQ=255)
caCGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACgg > 1:1028442/1‑93 (MQ=255)
|
GAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAAGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTA > NC_000913/1607622‑1607799
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAAGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTATCC > NC_000913/1607617‑1607802
|
CCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAG < SRR4302547.815487/94‑1 (MQ=60)
CCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAG < SRR4302547.3966878/94‑1 (MQ=60)
CGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGGAAGATTCCAGTTCATCACGAGG > SRR4302547.1243116/1‑94 (MQ=60)
GAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAA > SRR4302547.6467099/1‑94 (MQ=60)
GAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAA < SRR4302547.6506444/94‑1 (MQ=60)
AGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAAT < SRR4302547.201603/94‑1 (MQ=60)
AGCGCGATAGACAGCAGCTGATGCTTAATGGACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAAT < SRR4302547.1962825/94‑1 (MQ=60)
GCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATC < SRR4302547.4720961/94‑1 (MQ=60)
GCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATC < SRR4302547.6367226/94‑1 (MQ=60)
CGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCC < SRR4302547.922454/94‑1 (MQ=60)
GCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCA > SRR4302547.6648245/1‑94 (MQ=60)
GCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCA < SRR4302547.3075806/94‑1 (MQ=60)
CGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAG > SRR4302547.3093378/1‑94 (MQ=60)
CGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAG > SRR4302547.4761408/1‑94 (MQ=60)
GATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGT < SRR4302547.2351630/94‑1 (MQ=60)
GATAGACAGCAGCTGATGCTTAATGTACGGGTTACGACACCGCCCGGTGACTGCAATGGCGAAAGATTCCAATTCATCACGAGGCAAAACCAGT < SRR4302547.6793571/94‑1 (MQ=60)
AGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACC > SRR4302547.3921751/1‑94 (MQ=60)
ACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGG < SRR4302547.178416/94‑1 (MQ=60)
ACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGG < SRR4302547.2604720/94‑1 (MQ=60)
CAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGA < SRR4302547.6353047/94‑1 (MQ=60)
AGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAA < SRR4302547.3150753/94‑1 (MQ=60)
GCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAAT < SRR4302547.3407299/94‑1 (MQ=60)
CAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATA > SRR4302547.4924588/1‑94 (MQ=60)
AGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAA < SRR4302547.6339678/94‑1 (MQ=60)
AGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAA < SRR4302547.4231472/94‑1 (MQ=60)
AGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAA > SRR4302547.6034036/1‑94 (MQ=60)
GCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAAT > SRR4302547.4465079/1‑94 (MQ=60)
GCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAAT < SRR4302547.5419818/94‑1 (MQ=60)
CTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATT < SRR4302547.5630845/94‑1 (MQ=60)
TGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTT < SRR4302547.5315527/94‑1 (MQ=60)
GATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTC > SRR4302547.3196875/1‑94 (MQ=60)
GATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTC > SRR4302547.3359015/1‑94 (MQ=60)
ATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCT < SRR4302547.3755934/94‑1 (MQ=60)
TGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTT < SRR4302547.2406602/94‑1 (MQ=60)
GCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTC < SRR4302547.528022/94‑1 (MQ=60)
GCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTC > SRR4302547.5758513/1‑94 (MQ=60)
CTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCG > SRR4302547.1109228/1‑94 (MQ=60)
CTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCG < SRR4302547.5956709/94‑1 (MQ=60)
CTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCG > SRR4302547.2928235/1‑94 (MQ=60)
TTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGT < SRR4302547.4216755/94‑1 (MQ=60)
GTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATA < SRR4302547.5262044/94‑1 (MQ=60)
GTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATA > SRR4302547.5549896/1‑94 (MQ=60)
TACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAG < SRR4302547.67637/94‑1 (MQ=60)
TACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAG > SRR4302547.1909062/1‑94 (MQ=60)
TACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAG < SRR4302547.2036657/94‑1 (MQ=60)
TACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAG > SRR4302547.2480829/1‑94 (MQ=60)
TACGGGTTACGGAAACGCCCGGGTACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAG < SRR4302547.4006841/94‑1 (MQ=60)
ACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGC > SRR4302547.2190612/1‑94 (MQ=60)
CGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCT < SRR4302547.2520521/94‑1 (MQ=60)
GGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTT < SRR4302547.827564/94‑1 (MQ=60)
GGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTT < SRR4302547.6256566/94‑1 (MQ=60)
GGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTT < SRR4302547.5150867/94‑1 (MQ=60)
GGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTT < SRR4302547.6770424/94‑1 (MQ=60)
GGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTT < SRR4302547.6568785/94‑1 (MQ=60)
GTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTT > SRR4302547.4899896/1‑94 (MQ=60)
GTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTT > SRR4302547.4779173/1‑94 (MQ=60)
TTACGGAAGCGCGCGGTTACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTT < SRR4302547.3938614/94‑1 (MQ=60)
TTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTT < SRR4302547.715198/94‑1 (MQ=60)
TTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTT < SRR4302547.4640170/94‑1 (MQ=60)
TTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTT < SRR4302547.6450493/94‑1 (MQ=60)
TTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTT < SRR4302547.1900833/94‑1 (MQ=60)
TACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTC < SRR4302547.2100976/94‑1 (MQ=60)
TACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTC < SRR4302547.4723829/94‑1 (MQ=60)
TACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTC < SRR4302547.1730429/94‑1 (MQ=60)
CGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAA < SRR4302547.4872082/94‑1 (MQ=60)
GGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAAC > SRR4302547.6616356/1‑94 (MQ=60)
GGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAAC < SRR4302547.3521933/94‑1 (MQ=60)
GAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACG < SRR4302547.6161106/94‑1 (MQ=60)
GAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACG < SRR4302547.5412586/94‑1 (MQ=60)
AACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAA < SRR4302547.1996435/94‑1 (MQ=60)
ACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAAT < SRR4302547.5732828/94‑1 (MQ=60)
CGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATG < SRR4302547.1588022/94‑1 (MQ=60)
CGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATG < SRR4302547.1331089/94‑1 (MQ=60)
CGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATG < SRR4302547.4431955/94‑1 (MQ=60)
CCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCG < SRR4302547.3123034/94‑1 (MQ=60)
CGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCA < SRR4302547.1105735/94‑1 (MQ=60)
CGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCA < SRR4302547.2921276/94‑1 (MQ=60)
GGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAA < SRR4302547.3550800/94‑1 (MQ=60)
TGACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAAT < SRR4302547.6425500/94‑1 (MQ=60)
GACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATT > SRR4302547.1682944/1‑94 (MQ=60)
GACTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATT > SRR4302547.1741764/1‑94 (MQ=60)
CTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTC < SRR4302547.1414004/94‑1 (MQ=60)
CTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTC > SRR4302547.3894983/1‑94 (MQ=60)
CTGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTC < SRR4302547.5229108/94‑1 (MQ=60)
TGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCA < SRR4302547.4247397/94‑1 (MQ=60)
TGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCA > SRR4302547.351034/1‑94 (MQ=60)
TGCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCA > SRR4302547.1649364/1‑94 (MQ=60)
GCACTGGCGAAATATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTATTTCAACGAATGCGCAAATTTCAG > SRR4302547.3095921/1‑94 (MQ=60)
GCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAG < SRR4302547.812809/94‑1 (MQ=60)
GCACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTAAG < SRR4302547.5385531/94‑1 (MQ=60)
CACTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGC < SRR4302547.3183997/94‑1 (MQ=60)
CTGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCAT > SRR4302547.6136277/1‑94 (MQ=60)
TGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATC < SRR4302547.510745/94‑1 (MQ=60)
TGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATC > SRR4302547.400208/1‑94 (MQ=60)
TGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATC < SRR4302547.5424128/94‑1 (MQ=60)
TGGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATC < SRR4302547.5833364/94‑1 (MQ=60)
GGCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCG < SRR4302547.1489904/94‑1 (MQ=60)
GCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGT > SRR4302547.706492/1‑94 (MQ=60)
GCGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGT > SRR4302547.3134155/1‑94 (MQ=60)
CGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTT > SRR4302547.1612489/1‑94 (MQ=60)
CGAAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTT < SRR4302547.4546624/94‑1 (MQ=60)
AAAGATTCCAGTTCATCGCGAGGCAAATCCAGTACCGGAATAATTCCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCA < SRR4302547.5335041/94‑1 (MQ=60)
AAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCA < SRR4302547.3416348/94‑1 (MQ=60)
AAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCA < SRR4302547.2671902/94‑1 (MQ=60)
AAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCAT < SRR4302547.1752779/94‑1 (MQ=60)
AAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCAT < SRR4302547.2231467/94‑1 (MQ=60)
AAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCAT < SRR4302547.2600150/94‑1 (MQ=60)
AAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCAT > SRR4302547.996766/1‑94 (MQ=60)
AAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCAT < SRR4302547.2927506/94‑1 (MQ=60)
AAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCAT > SRR4302547.3133863/1‑94 (MQ=60)
AGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATC > SRR4302547.5465015/1‑94 (MQ=60)
AGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATC < SRR4302547.3090460/94‑1 (MQ=60)
TTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCT > SRR4302547.2410585/1‑94 (MQ=60)
TTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCT < SRR4302547.4738509/94‑1 (MQ=60)
CCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTC < SRR4302547.4644319/94‑1 (MQ=60)
CCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTC < SRR4302547.5234064/94‑1 (MQ=60)
CAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCA > SRR4302547.4129618/1‑94 (MQ=60)
GTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACC < SRR4302547.3753756/94‑1 (MQ=60)
TTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCT > SRR4302547.2447880/1‑94 (MQ=60)
TCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTA > SRR4302547.207966/1‑94 (MQ=60)
CATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTAC < SRR4302547.2928112/94‑1 (MQ=60)
CATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTAC < SRR4302547.2170622/94‑1 (MQ=60)
ATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACG > SRR4302547.2585969/1‑94 (MQ=60)
ATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACG < SRR4302547.4020512/94‑1 (MQ=60)
ATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACG > SRR4302547.1647992/1‑94 (MQ=60)
TCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGG > SRR4302547.437496/1‑94 (MQ=60)
TCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGG > SRR4302547.1048643/1‑94 (MQ=60)
CACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGT < SRR4302547.4352305/94‑1 (MQ=60)
CGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTAT > SRR4302547.6015623/1‑94 (MQ=60)
AGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTATCC < SRR4302547.3557604/94‑1 (MQ=60)
|
CCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGACTGCACTGGCGAAAGATTCCAGTTCATCACGAAGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTATCC > NC_000913/1607617‑1607802
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
