Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
593 |
264.2 |
13311096 |
97.8% |
13018251 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,804,740 |
A→G |
D117G (GAT→GGT) |
pfkB → |
6‑phosphofructokinase II |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,804,740 | 0 | A | G | 81.5%
| 467.9
/ 96.7
| 200 | D117G (GAT→GGT) | pfkB | 6‑phosphofructokinase II |
| Reads supporting (aligned to +/- strand): ref base A (21/16); new base G (82/81); total (103/97) |
| Fisher's exact test for biased strand distribution p-value = 5.85e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.86e-01 |
Only 100 of 202 total aligned reads displayed.
AAAGACTGGACCCGGCAGAATTTACACGTACATGTGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGATGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTGGTCATAAGCGGAAGCCTGCCGCCAGGTGTGAAGCT > NC_000913/1804649‑1804830
|
aaaGACTGGACCCGGCAGAATTTACACGTACATGTGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGAt > 1:5810252/1‑93 (MQ=255)
aaGACTGGACCCGGCAGAATTTACACGTACATGTGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTg < 1:6249425/93‑1 (MQ=255)
ataCTGGACCCGGCAGAATTTACACGTACATGTGGAAGCAAGCGGTAAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGa < 1:2347434/91‑1 (MQ=255)
aGACTGGACCCGGCAGAATTTACACGTACATGTGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGa > 1:103230/1‑93 (MQ=255)
aGACTGGACCCGGCAGAATTTACACGTACATGTGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGATGa > 2:1547743/1‑93 (MQ=255)
cTGGACCCGGCAGAATTTACACGTACATGTGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGtt < 2:6057088/93‑1 (MQ=255)
tGGACCCGGCAGAATTTACACGTACATGTGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGttt > 2:1450251/1‑93 (MQ=255)
tGGACCCGGCAGAATTTACACGTACATGTGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGttt > 1:4378765/1‑93 (MQ=255)
tGGACCCGGCAGAATTTACACGTACATGTGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGttt < 2:5112536/93‑1 (MQ=255)
tGGACCCGGCAGAATTTACACGTACATGTGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGttt < 2:6300885/93‑1 (MQ=255)
ggACCCGGCAGAATTTACACGTACATGTGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTc < 1:5104079/93‑1 (MQ=255)
ggACCCGGCAGAATTTACACGTACATGTGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTc < 2:3816284/93‑1 (MQ=255)
gACCCGGCAGAATTTACACGTACATGTGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCg > 1:3427765/1‑93 (MQ=255)
aCCCGGCAGAATTTACACGTACATGTGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCGc > 2:1314342/1‑93 (MQ=255)
ggCAGAATTTACACGTACATGTGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGc > 1:2714143/1‑93 (MQ=255)
ggCAGAATTTACACGTACATGTGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGc < 2:2317230/93‑1 (MQ=255)
gCAGAATTTACACGTACATGTGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCt < 1:1435614/93‑1 (MQ=255)
cAGAATTTACACGTACATGTGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGGATTTAATGAAGGTGAGTTTGGCCAGCtt > 2:1948578/1‑93 (MQ=255)
cAGAATTTACACGTACATGTGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCtt < 1:5199893/93‑1 (MQ=255)
cAGAATTTACACGTACATGTGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCtt < 2:4012748/93‑1 (MQ=255)
cAGAATTTACACGTACATGTGGAAGCAAGCGGTGAGCAGAATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGGGTTTCGCCAGCtc > 1:336487/1‑92 (MQ=255)
aGAATTTACACGTACATGTGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTg < 2:2382656/93‑1 (MQ=255)
gAATTTACACGTACATGTGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGATGAGTTTCGCCAGCTTGa > 1:1902472/1‑93 (MQ=255)
gAATTTACACGTACATGTGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGATGAGTTTCGCCAGCTTGa > 2:3892579/1‑93 (MQ=255)
aaTTTACACGTACATGTGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGaa > 2:4484930/1‑93 (MQ=255)
aTTTACACGTACATGTGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAag > 1:3134149/1‑93 (MQ=255)
tttACACGTACATGTGGAAGCAAGCGGTGAGCATTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGATGAGTTTCGCCAGCTTGAaga < 1:181554/93‑1 (MQ=255)
tttACACGTACATGTGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAaga > 2:3701044/1‑93 (MQ=255)
tttACACGTACATGTGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAaga < 2:5993827/93‑1 (MQ=255)
tttACACGTACATGTGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAaga < 2:2448551/93‑1 (MQ=255)
tttACACGTACATGTGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAaga > 1:2224755/1‑93 (MQ=255)
ttACACGTACATGTGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAagag < 2:824897/93‑1 (MQ=255)
ttACACGTACATGTGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAagag < 2:6243690/93‑1 (MQ=255)
tACACGTACATGTGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGc > 1:5465355/1‑93 (MQ=255)
acacGTACATGTGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGATGAGTTTCGCCAGCTTGAAGAGCa > 2:2184933/1‑93 (MQ=255)
acacGTACATGTGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGATGAGTTTCGCCAGCTTGAAGAGCa > 2:5035046/1‑93 (MQ=255)
gTACATGTTGAAGCAAGCGGTGAGCAGTAGCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGtt < 1:1462319/93‑1 (MQ=255)
gTACATGTGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGATGAGTTTCGCCAGCTTGAAGAGCAAGtt > 1:6389066/1‑93 (MQ=255)
tACATGTGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTc < 2:5414718/93‑1 (MQ=255)
aCATGTGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCt > 1:1562357/1‑93 (MQ=255)
aCATGTGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGATGAGTTTCGCCAGCTTGAAGAGCAAGTTCt > 1:6044690/1‑93 (MQ=255)
tgtgGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGa < 1:4626604/93‑1 (MQ=255)
gtgGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGaa > 1:2857769/1‑93 (MQ=255)
gtgGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGaa > 1:6570134/1‑93 (MQ=255)
ggAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAAt < 2:1885048/93‑1 (MQ=255)
ggAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAAt > 1:4696758/1‑93 (MQ=255)
gAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAAtt > 1:4893840/1‑93 (MQ=255)
aagcaagcGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTg > 1:5905374/1‑93 (MQ=255)
caagcGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAAt > 1:2150665/1‑93 (MQ=255)
aagcGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATc < 2:3513930/93‑1 (MQ=255)
aagcGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATc > 2:3336690/1‑93 (MQ=255)
gcGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGATGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCg > 1:5249032/1‑93 (MQ=255)
gTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCgggg > 2:5435628/1‑93 (MQ=255)
tGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGATGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGc > 1:1711806/1‑93 (MQ=255)
gAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGATGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGcc < 1:5893322/93‑1 (MQ=255)
aGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCa < 1:2108101/93‑1 (MQ=255)
cAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATc > 1:2944477/1‑93 (MQ=255)
gTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCt < 1:6098359/93‑1 (MQ=255)
tCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTGGt < 2:5951507/93‑1 (MQ=255)
tCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTGGt > 2:2684099/1‑93 (MQ=255)
tttGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTGGTCATa > 2:2990716/1‑93 (MQ=255)
tttGTTATGCCAGGCGCGGCATTAAATGAAGATGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTGGTCATa < 1:3860127/93‑1 (MQ=255)
ttGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTGGTCATaa < 1:1661241/93‑1 (MQ=255)
ttGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTGGTCATaa > 2:5485045/1‑93 (MQ=255)
tGTTATGCCAGGCGCGGCATTAAATGAAGATGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTGGTCATAAg > 2:4962012/1‑93 (MQ=255)
ccAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTGGTCATAAGCGGAAGc > 2:724826/1‑93 (MQ=255)
cAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATGCTGGTCATAAGCGGAAGcc > 2:416802/1‑93 (MQ=255)
cAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTGGTCATAAGCGGAAGcc > 2:3145507/1‑93 (MQ=255)
cAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTGGTCATAAGCGGAAGcc < 2:3165747/93‑1 (MQ=255)
cAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTGGTCATAAGCGGAAGcc < 2:2622024/93‑1 (MQ=255)
cAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTGGTCATAAGCGGAAGcc > 2:691278/1‑93 (MQ=255)
cAGGCGCGGCATTAAATGAAGATGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTGGTCATAAGCGGAAGcc < 1:1635469/93‑1 (MQ=255)
aGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTGGTCATAAGCGGAAGCCt > 2:2874414/1‑93 (MQ=255)
ggCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTGGTCATAAGCGGAAGACTg > 1:1319108/1‑93 (MQ=255)
gcgcGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTGGTCATAAGCGGAAGCCTgc < 1:409853/93‑1 (MQ=255)
gcgcGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTGGTCATAAGCGGAAGCCTgc > 1:3486157/1‑93 (MQ=255)
gcgGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTGGTCATAAGCGGAAGCCTgccg > 2:5808118/1‑93 (MQ=255)
cgGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTGGTCATAAGCGGAAGCCTgccgc < 2:344475/93‑1 (MQ=255)
ggCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTGGTCATAAGCGGAAGCCTgccgcc > 2:3856617/1‑93 (MQ=255)
ggCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTGGTCATAAGCGGAAGCCTgccgcc > 2:361973/1‑93 (MQ=255)
ggCATTAAATGAAGATGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTGGTCATAAGCGGAAGCCTgccgcc > 1:4751056/1‑93 (MQ=255)
gCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTGGTCATAAGCGGAAGCCTGCCGCCa > 2:6621353/1‑93 (MQ=255)
cATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTGGTCATAAGCGGAAGc > 1:127453/1‑83 (MQ=255)
cATTAAATGAAGATGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTGGTCATAAGCGGAAGCCTGCCGCCAg > 2:122264/1‑93 (MQ=255)
aTTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTGGTCATAAGCGGAAGCCTGCCGCCAgg > 2:2613112/1‑93 (MQ=255)
ttAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTGGTCATAAGCGGAAGCCTGCCGCCAGgt > 2:4401103/1‑93 (MQ=255)
tAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTGGTCATAAGCGGAAGCCTGCCGCCAGgtg < 2:1802338/93‑1 (MQ=255)
tAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTGGTCATAAGCGGAAGCCTGCCGCCAGgtg < 2:5649399/93‑1 (MQ=255)
tAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTGGTCATAAGCGGAAGCCTGCCGCCAGgtg < 2:4713812/93‑1 (MQ=255)
tAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTGGTCATAAGCGGAAGCCTGCCGCCAGgtg > 2:367531/1‑93 (MQ=255)
aaaTGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTGGTCATAAGCGGAAGCCTGCCGCCAGgtgt > 2:2502988/1‑93 (MQ=255)
aaaTGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTGGTCATAAGCGGAAGCCTGCCGCCAGgtgt < 1:4930522/93‑1 (MQ=255)
aaTGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTGGTCATAAGCGGAAGCCTGCCGCCAGGtgtg < 2:4685601/93‑1 (MQ=255)
aaTGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTGGTCATAAGCGGAAGCCTGCCGCCAGGtgtg < 1:3939470/93‑1 (MQ=255)
tGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTGGTCATAAGCGGAAGCCTGCCGCCAGGTGTGaa < 2:5855232/93‑1 (MQ=255)
tGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTGGTCATAAGCGGAAGCCTGCCGCCAGGTGTGaa < 1:1144453/93‑1 (MQ=255)
tGAAGATGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTGGTCATAAGCGGAAGCCTGCCGCCAGGTGTGaa < 2:4229418/93‑1 (MQ=255)
gAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTGGTCATAAGCGGAAGCCTGCCGCCAGGTGTGAAg < 1:2532306/93‑1 (MQ=255)
aaGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTGGTCATAAGCGGAAGCCTGCCGCCAGGTGTGAAGc > 2:5581445/1‑93 (MQ=255)
aaGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTGGTCATAAGCGGAAGCCTGCCGCCAGGTGTGAAGc < 1:1876835/93‑1 (MQ=255)
|
AAAGACTGGACCCGGCAGAATTTACACGTACATGTGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGATGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTGGTCATAAGCGGAAGCCTGCCGCCAGGTGTGAAGCT > NC_000913/1804649‑1804830
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CAAAGACTGGACCCGGCAGAATTTACACGTACATGTGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGATGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTGGTCATAAGCGGAAGCCTGCCGCCAGGTGTGAAGCTGGA > NC_000913/1804648‑1804833
|
CAAAGACTGGACCCGGCAGAATTTACACGTACATGTGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGT < SRR4302547.5744378/94‑1 (MQ=60)
CAAAGACTGGACCCGGCAGAATTTACACGTACATGTGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGT > SRR4302547.5940787/1‑94 (MQ=60)
CAAAGACTGGACCCGGCAGAATTTACACGTACATGTGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGT < SRR4302547.4806901/94‑1 (MQ=60)
CAAAGACTGGACCCGGCAGAATTTACACGTACATGTGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGT > SRR4302547.3767031/1‑94 (MQ=60)
CAAAGACTGGACCCGGCAGAATTTACACGTACATGTGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGAT > SRR4302547.5930456/1‑94 (MQ=60)
AAAGACTGGACCCGGCAGAATTTACACGTACATGTGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTG < SRR4302547.6446329/94‑1 (MQ=60)
AAGACTGGACCCGGCAGAATTTACACGTACATGTGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGA > SRR4302547.105119/1‑94 (MQ=60)
AAGACTGGACCCGGCAGAATTTACACGTACATGTGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGA < SRR4302547.6379250/94‑1 (MQ=60)
ATACTGGACCCGGCAGAATTTACACGTACATGTGGAAGCAAGCGGTAAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAG < SRR4302547.2395011/94‑1 (MQ=60)
CTGGACCCGGCAGAATTTACACGTACATGTGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTT > SRR4302547.4468772/1‑94 (MQ=60)
GGACCCGGCAGAATTTACACGTACATGTGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCG > SRR4302547.3497587/1‑94 (MQ=60)
GGACCCGGCAGAATTTACACGTACATGTGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCG > SRR4302547.2807493/1‑94 (MQ=60)
GGACCCGGCAGAATTTACACGTACATGTGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCA < SRR4302547.5209281/94‑1 (MQ=60)
GACCCGGCAGAATTTACACGTACATGTGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCGC > SRR4302547.3143191/1‑94 (MQ=60)
CGGCAGAATTTACACGTACATGTGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGC > SRR4302547.2768625/1‑94 (MQ=60)
GCAGAATTTACACGTACATGTGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTT < SRR4302547.1464316/94‑1 (MQ=60)
GCAGAATTTACACGTACATGTGGAAGCAAGCGGTGAGCAGAATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGGGTTTCGCCAGCTC > SRR4302547.342750/1‑94 (MQ=60)
CAGAATTTACACGTACATGTGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTG < SRR4302547.5306899/94‑1 (MQ=60)
CAGAATTTACACGTACATGTGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGATGAGTTTCGCCAGCTTG < SRR4302547.1909900/94‑1 (MQ=60)
AGAATTTACACGTACATGTGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGA > SRR4302547.5441632/1‑94 (MQ=60)
AGAATTTACACGTACATGTGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGATGAGTTTCGCCAGCTTGA > SRR4302547.1940103/1‑94 (MQ=60)
GAATTTACACGTACATGTGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGATGAGTTTCGCCAGCTTGAA < SRR4302547.1963121/94‑1 (MQ=60)
AATTTACACGTACATGTGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAG > SRR4302547.3196374/1‑94 (MQ=60)
ATTTACACGTACATGTGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGA > SRR4302547.1730239/1‑94 (MQ=60)
ATTTACACGTACATGTGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGA > SRR4302547.2269583/1‑94 (MQ=60)
TTTACACGTACATGTGGAAGCAAGCGGTGAGCATTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGATGAGTTTCGCCAGCTTGAAGAG < SRR4302547.184961/94‑1 (MQ=60)
TTACACGTACATGTGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGC > SRR4302547.1302942/1‑94 (MQ=60)
TTACACGTACATGTGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGC > SRR4302547.365618/1‑94 (MQ=60)
TTACACGTACATGTGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGC > SRR4302547.5578253/1‑94 (MQ=60)
CACGTACATGTGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAG < SRR4302547.1469688/94‑1 (MQ=60)
CGTACATGTGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTT > SRR4302547.296815/1‑94 (MQ=60)
CGTACATGTGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGATGAGTTTCGCCAGCTTGAAGAGCAAGTT > SRR4302547.6522374/1‑94 (MQ=60)
GTGCATGTGGAAGCAAGCGGTTAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTC < SRR4302547.6204569/94‑1 (MQ=60)
GTACATGTTGAAGCAAGCGGTGAGCAGTAGCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTC < SRR4302547.1491541/94‑1 (MQ=60)
GTACATGTGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTC < SRR4302547.5257364/94‑1 (MQ=60)
TACATGTGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCT > SRR4302547.1593475/1‑94 (MQ=60)
TACATGTGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCT < SRR4302547.2277179/94‑1 (MQ=60)
TACATGTGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGATGAGTTTCGCCAGCTTGAAGAGCAAGTTCT > SRR4302547.6170108/1‑94 (MQ=60)
CATGTGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGG > SRR4302547.1684078/1‑94 (MQ=60)
ATGTGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGA > SRR4302547.4777587/1‑94 (MQ=60)
TGTGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAA > SRR4302547.2914872/1‑94 (MQ=60)
TGTGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAA > SRR4302547.6706929/1‑94 (MQ=60)
TGTGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAA < SRR4302547.4722423/94‑1 (MQ=60)
GTGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGATGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAA > SRR4302547.1615077/1‑94 (MQ=60)
TGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAAT < SRR4302547.6379711/94‑1 (MQ=60)
TGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAAT > SRR4302547.4794043/1‑94 (MQ=60)
GGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATT < SRR4302547.6065883/94‑1 (MQ=60)
GGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATT > SRR4302547.4995193/1‑94 (MQ=60)
GGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATT > SRR4302547.3442747/1‑94 (MQ=60)
GAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTG > SRR4302547.6027673/1‑94 (MQ=60)
AAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGA < SRR4302547.3530853/94‑1 (MQ=60)
AAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGATGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGA < SRR4302547.5120305/94‑1 (MQ=60)
GCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAAT > SRR4302547.2193591/1‑94 (MQ=60)
CAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATA > SRR4302547.1251511/1‑94 (MQ=60)
CAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGATGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATC < SRR4302547.184908/94‑1 (MQ=60)
AGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGATGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCG > SRR4302547.5357093/1‑94 (MQ=60)
GCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGG < SRR4302547.62883/94‑1 (MQ=60)
CGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGATGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGG < SRR4302547.1924437/94‑1 (MQ=60)
GGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGG < SRR4302547.5750392/94‑1 (MQ=60)
GTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGATGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGC > SRR4302547.1745472/1‑94 (MQ=60)
GAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGATGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCA < SRR4302547.6015333/94‑1 (MQ=60)
AGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCAT < SRR4302547.2150099/94‑1 (MQ=60)
GCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATC > SRR4302547.3003137/1‑94 (MQ=60)
AGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGATGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGCGCCATCCT > SRR4302547.5010056/1‑94 (MQ=60)
GTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTG < SRR4302547.6224866/94‑1 (MQ=60)
GTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTG < SRR4302547.2736092/94‑1 (MQ=60)
GTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTG < SRR4302547.4871055/94‑1 (MQ=60)
TATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTGG < SRR4302547.1437210/94‑1 (MQ=60)
TATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTGG > SRR4302547.2208398/1‑94 (MQ=60)
ATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTGGT > SRR4302547.4321544/1‑94 (MQ=60)
CGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGATGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTGGTCA > SRR4302547.5312592/1‑94 (MQ=60)
TTTGTTATGCCAGGCGCGGCATTAAATGAAGATGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTGGTCATAA < SRR4302547.3938685/94‑1 (MQ=60)
TTGTTATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTGGTCATAAG < SRR4302547.1693994/94‑1 (MQ=60)
ATGCCAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTGGTCATAAGCGGAA > SRR4302547.6025532/1‑94 (MQ=60)
CAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTGGTCGTAAGCGGAAGCCT < SRR4302547.3989676/94‑1 (MQ=60)
CAGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTGGTCATAAGCGGAAGCCT < SRR4302547.1533742/94‑1 (MQ=60)
CAGGCGCGGCATTAAATGAAGATGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTGGTCATAAGCGGAAGCCT < SRR4302547.1667811/94‑1 (MQ=60)
AGGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTGGTCATAAGCGGAAGACTG > SRR4302547.1345621/1‑94 (MQ=60)
AGGCGCGGCATTAAATGAAGATGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTGGTCATAAGCGGAAGCCTG < SRR4302547.6663333/94‑1 (MQ=60)
GGCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTGGTCATAAGCGGAAGCCTGC > SRR4302547.3557281/1‑94 (MQ=60)
GCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTGGTCATAAGCGGAAGCCTGCC < SRR4302547.417449/94‑1 (MQ=60)
GCGCGGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTGGTCATAAGCGGAAGCCTGCC < SRR4302547.2157079/94‑1 (MQ=60)
CGGCATTAAATGAAGATGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTGGTCATAAGCGGAAGCCTGCCGCC > SRR4302547.4849506/1‑94 (MQ=60)
GGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGGGCAAGTTCTGGAAATTGAATGCGGCGCCATCCTGGTCATAAGCGGAAGCCTGCCGCCA > SRR4302547.465180/1‑94 (MQ=60)
GGCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTGGTCATAAGCGGAAGCCTGCCGCCA < SRR4302547.1133001/94‑1 (MQ=60)
GCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTGGTCATAAGCGGAAGCCaatgtcaag > SRR4302547.129757/1‑85 (MQ=60)
GCATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTGGTCATAAGCGGAAGCCTGCCGCCAG > SRR4302547.3306974/1‑94 (MQ=60)
CATTAAATGAAGATGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTGGTCATAAGCGGAAGCCTGCCGCCAGG > SRR4302547.481692/1‑94 (MQ=60)
ATTAAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTGGTCATAAGCGGAAGCCTGCCGCCAGGT < SRR4302547.2482328/94‑1 (MQ=60)
ATTAAATGAAGGAGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTGGTCATAAGCGGAAGCCTGTCGCCAGGT > SRR4302547.4641633/1‑94 (MQ=60)
AAATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTGGTCATAAGCGGAAGCCTGCCGCCAGGTGTG < SRR4302547.5032652/94‑1 (MQ=60)
AATGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTGGTCATAAGCGGAAGCCTGCCGCCAGGTGTGA < SRR4302547.4019570/94‑1 (MQ=60)
TGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTGGTCATAAGCGGAAGCCTGCCGCCAGGTGTGAAG < SRR4302547.1167581/94‑1 (MQ=60)
TGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTGGTCATAAGCGGAAGCCTGCCGCCAGGTGTGAAG > SRR4302547.5941281/1‑94 (MQ=60)
TGAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTGGTCATAAGCGGAAGCCTGCCGCCAGGTGTGAAG > SRR4302547.4064738/1‑94 (MQ=60)
GAAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTGGTCATAAGCGGAAGCCTGCCGCCAGGTGTGAAGC < SRR4302547.2583489/94‑1 (MQ=60)
AAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTGGTCATAAGCGGAAGCCTGCCGCCAGGTGTGAAGCT > SRR4302547.3646250/1‑94 (MQ=60)
AAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTGGTCATAAGCGGAAGCCTGCCGCCAGGTGTGAAGCT < SRR4302547.1913921/94‑1 (MQ=60)
AAGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTGGTCATAAGCGGAAGCCTGCCGCCAGGTGTGAAGCT > SRR4302547.6149194/1‑94 (MQ=60)
AGGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTGGTCATAAGCGGAAGCCTGCCGCCAGGTGTGAAGCTG < SRR4302547.1265370/94‑1 (MQ=60)
GGTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTGGTCATAAGCGGAAGCCTGCCGCCAGGTGTGAAGCTGG < SRR4302547.5460482/94‑1 (MQ=60)
GTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTGGTCATAAGCGGAAGCCTGCCGCCAGGTGTGAAGCTGGA > SRR4302547.3004136/1‑94 (MQ=60)
GTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTGGTCATAAGCGGAAGCCTGCCGCCAGGTGTGAAGCTGGA > SRR4302547.5473825/1‑94 (MQ=60)
GTGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTGGTCATAAGCGGAAGCCTGCCGCCAGGTGTGAAGCTGGA < SRR4302547.1206714/94‑1 (MQ=60)
GTGAGTGTCGCAAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCAACCTTGGTCATAAGCGGAAGCCTGCCGCCAGGTGTGAAGCTGGA < SRR4302547.5892713/94‑1 (MQ=60)
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CAAAGACTGGACCCGGCAGAATTTACACGTACATGTGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGATGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTGGTCATAAGCGGAAGCCTGCCGCCAGGTGTGAAGCTGGA > NC_000913/1804648‑1804833
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
