Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
593 |
264.2 |
13311096 |
97.8% |
13018251 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,807,191 |
G→A |
P23S (CCT→TCT) |
b1726 ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,807,191 | 0 | G | A | 90.0%
| 639.3
/ 41.9
| 201 | P23S (CCT→TCT) | b1726 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (13/7); new base A (97/84); total (110/91) |
| Fisher's exact test for biased strand distribution p-value = 3.56e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.73e-01 |
Only 100 of 203 total aligned reads displayed.
AGTCGAGCATGACCGCATTAATGCCTTCCTTGTTTTCCTGCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGGTATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATACGTCATGAGTTCTCCTTGATTAAGACGCGTCG > NC_000913/1807101‑1807283
|
aGTCGAGCATGACCGCATTAATGCCTTCCTTGTTTTCCTGCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGAta > 2:164057/1‑93 (MQ=255)
aGTCGAGCATGACCGCATTAATGCCTTCCTTGTTTTCCTGCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGAta > 2:1673780/1‑93 (MQ=255)
aGTCGAGCATGACCGCATTAATGCCTTCCTTGTTTTCCTGCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGAta < 2:3340980/93‑1 (MQ=255)
gTCGAGCATGACCGCATTAATGCCTTCCTTGTTTTCCTGCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGGtat > 2:4065962/1‑93 (MQ=255)
tCGAGCATGACCGCATTAATGCCTTCCTTGTTTTCCTGCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGAtata < 1:730631/93‑1 (MQ=255)
cGAGCATGACCGCATTAATGCCTTCCTTGTTTTCCTGCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATaa < 2:6333615/93‑1 (MQ=255)
cGAGCATGACCGCATTAATGCCTTCCTTGTTTTCCTGCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATaa < 2:5860831/93‑1 (MQ=255)
cGAGCATGACCGCATTAATGCCTTCCTTGTTTTCCTGCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATaa > 1:49793/1‑93 (MQ=255)
gAGCATGACCGCATTAATGCCTTCCTTGTTTTCCTGCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATaaa < 2:4244126/93‑1 (MQ=255)
gAGCATGACCGCATTAATGCCTTCCTTGTTTTCCTGCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATaaa > 1:2922825/1‑93 (MQ=255)
aGCATGACCGCATTAATGCCTTCCTTGTTTTCCTGCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATaaaa > 2:2198185/1‑93 (MQ=255)
aGCATGACCGCAATAATGCCTTCCTTGTTTTCCTGCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATaaaa < 2:4743737/93‑1 (MQ=255)
gCATGACCGCATTAATGCCTTCCTTGTTTTCCTGCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATaaaaa > 1:6518913/1‑93 (MQ=255)
cATGACCGCATTAATGCCTTCCTTGTTTTCCTGCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAAt < 2:4103065/93‑1 (MQ=255)
tGACCGCATTAATGCCTTCCTTGTTTTCCTGCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCa > 1:2251476/1‑93 (MQ=255)
aCCGCATTAATGCCTTCCTTGTTTTCCTGCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCacc > 2:1793653/1‑93 (MQ=255)
ccGCATTAATGCCTTCCTTGTTTTCCTGCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCaccc < 2:3115578/93‑1 (MQ=255)
gCATTAATGCCTTCCTTGTTTTCCTGCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCacccaa > 1:5839373/1‑93 (MQ=255)
gCATTAATGCCTTCCTTGTTTTCCTGCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCacccaa < 1:3111156/93‑1 (MQ=255)
cATTAATGCCTTCCTTGTTTTCCTGCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCacccaac > 1:2501861/1‑93 (MQ=255)
ttAATGCCTTCCTTGTTTTCCTGCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCacccaaccc > 1:1480006/1‑93 (MQ=255)
tGCCTTCCTTGTTTTCCTGCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCaaaa > 1:2017505/1‑93 (MQ=255)
cttccttGTTTTCCTGCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGGTATAAAAATCACCCAACCCAAAATcc < 1:1427802/93‑1 (MQ=255)
cttccttGTTTTCCTGCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATct > 2:1877622/1‑92 (MQ=255)
cttccttGTTTTCCTGCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATcc < 1:542609/93‑1 (MQ=255)
ttccttGTTTTCCTGCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGGTATAAAAATCACCCAACCCAAAATCCt > 1:1160626/1‑93 (MQ=255)
ttccttGTTTTCCTGCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCt > 2:268120/1‑93 (MQ=255)
tccttGTTTTCCTGCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGGTATAAAAATCACCCAACCCAAAATCCtt > 1:3129303/1‑93 (MQ=255)
tccttGTTTTCCTGCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCtt < 2:4324042/93‑1 (MQ=255)
tccttGTTTTCCTGCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCtt > 2:2877056/1‑93 (MQ=255)
cttGTTTTCCTGCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCtttt < 2:3875999/93‑1 (MQ=255)
ttGTTTTCCTGCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTc < 2:2072987/93‑1 (MQ=255)
tttCCTGCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCaaaa < 2:4224908/93‑1 (MQ=255)
tttCCTGCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCaaaa < 1:5465005/93‑1 (MQ=255)
ttCCTGCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGGTATAAAAATCACCCAACCCAAAATCCTTTTCAAAAc > 2:5398640/1‑93 (MQ=255)
ttCCTGCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAAc < 2:5436880/93‑1 (MQ=255)
cTGCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAACGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGc > 2:2500843/1‑93 (MQ=255)
gCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCaa > 1:5551192/1‑93 (MQ=255)
ccGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAAt > 1:5768010/1‑93 (MQ=255)
ccGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAAt > 1:2602715/1‑93 (MQ=255)
cGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATg < 1:4877177/93‑1 (MQ=255)
cGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATg < 2:5320974/93‑1 (MQ=255)
cGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATg < 1:2663463/93‑1 (MQ=255)
gggTATTCATACATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGc > 1:2115287/1‑93 (MQ=255)
gggTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGGTATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGc < 2:708007/93‑1 (MQ=255)
gggTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGc > 1:5496771/1‑93 (MQ=255)
aTTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTcc < 1:4077465/93‑1 (MQ=255)
aTTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTcc < 1:9206/93‑1 (MQ=255)
ttCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTGCa > 1:3845627/1‑93 (MQ=255)
aTAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCt < 2:2468969/93‑1 (MQ=255)
aTAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCt > 2:5225621/1‑93 (MQ=255)
aaaTTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCttg > 2:2104503/1‑93 (MQ=255)
aTTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCttgtt > 1:4259269/1‑93 (MQ=255)
aTTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCttgtt < 2:3763764/93‑1 (MQ=255)
aTTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCttgtt > 1:5251072/1‑93 (MQ=255)
aTTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCttgtt > 1:5372869/1‑93 (MQ=255)
aTTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCttgtt > 2:4476937/1‑93 (MQ=255)
tttCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCttgttg > 2:1319609/1‑93 (MQ=255)
tCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGAt > 2:4900791/1‑93 (MQ=255)
tCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGAt < 1:3236236/93‑1 (MQ=255)
cAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATa > 1:1897055/1‑93 (MQ=255)
cAGCAAAGAAATCAATGTAGAGATAAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATa > 1:2474102/1‑93 (MQ=255)
aGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATAc < 2:4577132/93‑1 (MQ=255)
gCAAAGAAGTCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATACg > 1:1894019/1‑93 (MQ=255)
aaaGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATACGTc > 1:4744578/1‑93 (MQ=255)
aaGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAGTCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATACGTCa < 2:4666285/93‑1 (MQ=255)
aaGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATACGTCa > 1:4120840/1‑93 (MQ=255)
aaGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATACGTCa < 1:4026708/93‑1 (MQ=255)
aaGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATACGTCa < 1:5093756/93‑1 (MQ=255)
aGAAATCAATGTAGAGATCAATGCAGGTATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATACGTCAt < 2:4088311/93‑1 (MQ=255)
gAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATACGTCATg > 1:5418381/1‑93 (MQ=255)
gAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATACGTCATg > 2:1213233/1‑93 (MQ=255)
aaaTCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATACGTCATGa < 2:3514787/93‑1 (MQ=255)
aaaTCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATACGTCATGa > 1:5698544/1‑93 (MQ=255)
aTCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAACTCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATACGTCATGAGt < 2:3421650/93‑1 (MQ=255)
aaTGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATACGTCATGAGTtct > 1:5889404/1‑93 (MQ=255)
aaTGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATACGTCATGAGTtct > 1:1833189/1‑93 (MQ=255)
aaTGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATACGTCATGAGTtct > 1:1660304/1‑93 (MQ=255)
tGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATACGTCATGAGTTCTcc > 1:3668021/1‑93 (MQ=255)
tGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATACGTCATGAGTTCTcc < 2:5761855/93‑1 (MQ=255)
gTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATACGTCATGAGTTCTCCt < 1:100436/93‑1 (MQ=255)
gTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATACGTCATGAGTTCTCCt < 1:5272157/93‑1 (MQ=255)
gTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATACGTCATGAGTTCTCCt < 2:6083448/93‑1 (MQ=255)
gTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATACGTCATGAGTTCTCCt < 1:3332637/93‑1 (MQ=255)
agagATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATACGTCATGAGTTCTCCTTg > 2:6056845/1‑93 (MQ=255)
gagaTCAATGCAGGTATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATACGTCATGAGTTCTCCTTGa > 1:1116922/1‑93 (MQ=255)
agaTCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATACGTCATGAGTTCTCCTTGAt > 2:6282135/1‑93 (MQ=255)
gaTCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATACGTCATGAGTTCTCCTTGAtt > 2:3136088/1‑93 (MQ=255)
tCAATGCAGGTATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCttgttg < 1:124567/67‑1 (MQ=255)
tCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATACGTCATGAGTTCTCCTTGATTaa > 1:642441/1‑93 (MQ=255)
cAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATACGTCATGAGTTCTCCTTGATTAAg > 1:5717145/1‑93 (MQ=255)
cAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATACGTCATGAGTTCTCCTTGATTAAg < 2:1590408/93‑1 (MQ=255)
aaTGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAATTTGCAATTCGTTCAGCTTGTTGATACGTCATGAGTTCTCCTTGATTAAGa > 2:6640544/1‑93 (MQ=255)
aaTGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATACGTCATGAGTTCTCCTTGATTAAGa < 1:356013/93‑1 (MQ=255)
aTGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATACGTCATGAGTTCTCCTTGATTAAGAc < 1:5995118/93‑1 (MQ=255)
aTGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATACGTCATGAGTTCTCCTTGATTAAGAc < 2:6133244/93‑1 (MQ=255)
aTGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATACGTCATGAGTTCTCCTTGATTAAGAc > 1:4354396/1‑93 (MQ=255)
aTGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATACGTCATGAGTTCTCCTTGATTAAGAc < 2:642401/93‑1 (MQ=255)
gCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATACGTCATGAGTTCTCCTTGATTAAGAcgc < 2:5291083/93‑1 (MQ=255)
gTATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATACGTCATGAGTTCTCCTTGATTAAGACGcgtcg < 2:3973358/93‑1 (MQ=255)
|
AGTCGAGCATGACCGCATTAATGCCTTCCTTGTTTTCCTGCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGGTATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATACGTCATGAGTTCTCCTTGATTAAGACGCGTCG > NC_000913/1807101‑1807283
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AAAGTCGAGCATGACCGCATTAATGCCTTCCTTGTTTTCCTGCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGGTATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATACGTCATGAGTTCTCCTTGATTAAGACGCGTCGT > NC_000913/1807099‑1807284
|
AAAGTCGAGCATGACCGCATTAATGCCTTCCTTGTTTTCCTGCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGAT < SRR4302547.4111819/94‑1 (MQ=60)
AAGTCGAGCATGACCGCATTAATGCCTTCCTTGTTTTCCTGCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATA < SRR4302547.1213789/94‑1 (MQ=60)
TCGAGCATGACCGCATTAATGCCTTCCTTGTTTTCCTGCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAA < SRR4302547.744268/94‑1 (MQ=60)
TCGAGCATGACCGCATTAATGCCTTCCTTGTTTTCCTGCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAA > SRR4302547.50722/1‑94 (MQ=60)
CGAGCATGACCGCATTAATGCCTTCCTTGTTTTCCTGCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAA > SRR4302547.2981100/1‑94 (MQ=60)
TAGCATGACCGCATTAATGCCTTCCTTGTTTTCCTGCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAA > SRR4302547.506821/1‑94 (MQ=60)
AGCATGACCGCATTAATGCCTTCCTTGTTTTCCTGCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAA < SRR4302547.1121322/94‑1 (MQ=60)
AGCATGACCGCATTAATGCCTTCCTTGTTTTCCTGCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAA > SRR4302547.6654637/1‑94 (MQ=60)
CATGACCGCATTAATGCCTTCCTTGTTTTCCTGCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATC > SRR4302547.5241290/1‑94 (MQ=60)
ATGACCGCATTAATGCCTTCCTTGTTTTCCTGCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCA > SRR4302547.5531792/1‑94 (MQ=60)
ATGACCGCATTAATGCCTTCCTTGTTTTCCTGCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCA > SRR4302547.2296930/1‑94 (MQ=60)
TGACCGCATTAATGCCTTCCTTGTTTTCCTGCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCAC > SRR4302547.266601/1‑94 (MQ=60)
CCGCATTAATGCCTTCCTTGTTTTCCTGCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGGTATAAAAATCACCCA > SRR4302547.2599325/1‑94 (MQ=60)
CGCATTAATGCCTTCCTTGTTTTCCTGCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAA < SRR4302547.1816759/94‑1 (MQ=60)
CGCATTAATGCCTTCCTTGTTTTCCTGCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAA > SRR4302547.4914541/1‑94 (MQ=60)
CGCATTAATGCCTTCCTTGTTTTCCTGCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAA > SRR4302547.5960198/1‑94 (MQ=60)
GCATTAATGCCTTCCTTGTTTTCCTGCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGGTATAAAAATCACCCAAC > SRR4302547.882981/1‑94 (MQ=60)
GCATTAATGCCTTCCTTGTTTTCCTGCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAAC > SRR4302547.2552405/1‑94 (MQ=60)
GCATTAATGCCTTCCTTGTTTTCCTGCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAAC < SRR4302547.3172811/94‑1 (MQ=60)
ATTAATGCCTTCCTTGTTTTCCTGCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCC > SRR4302547.1509558/1‑94 (MQ=60)
TAATGCCTTCCTTGTTTTCCTGCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAA > SRR4302547.4331286/1‑94 (MQ=60)
ATGCCTTCCTTGTTTTCCTGCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAA > SRR4302547.2156357/1‑94 (MQ=60)
ATGCCTTCCTTGTTTTCCTGCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAA > SRR4302547.2057641/1‑94 (MQ=60)
CCTTCCTTGTTTTCCTGCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCC < SRR4302547.6098739/94‑1 (MQ=60)
CCTTCCTTGTTTTCCTGCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCC > SRR4302547.4515164/1‑94 (MQ=60)
CTTCCTTGTTTTCCTGCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGGTATAAAAATCACCCAACCCAAAATCCT > SRR4302547.1184102/1‑94 (MQ=60)
CTTCCTTGTTTTCCTGCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGGTATAAAAATCACCCAACCCAAAATCCT < SRR4302547.1456364/94‑1 (MQ=60)
CTTCCTTGTTTTCCTGCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCT < SRR4302547.552402/94‑1 (MQ=60)
TTCCTTGTTTTCCTGCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGGTATAAAAATCACCCAACCCAAAATCCTT > SRR4302547.3191399/1‑94 (MQ=60)
TTCCTTGTTTTCCTGCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTT < SRR4302547.5940922/94‑1 (MQ=60)
CTTGTTTTCCTGCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTC > SRR4302547.5493124/1‑94 (MQ=60)
CTTGTTTTCCTGCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTC > SRR4302547.6392106/1‑94 (MQ=60)
TTGTTTTCCTGCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCA < SRR4302547.3424650/94‑1 (MQ=60)
TTGTTTTCCTGCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCA > SRR4302547.4196692/1‑94 (MQ=60)
TTTCCTGCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAAC < SRR4302547.5577901/94‑1 (MQ=60)
TCCTGCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAG < SRR4302547.5982579/94‑1 (MQ=60)
TCCTGCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAG > SRR4302547.1237926/1‑94 (MQ=60)
CTGCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCA < SRR4302547.1569643/94‑1 (MQ=60)
CTGCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCA > SRR4302547.3820845/1‑94 (MQ=60)
TGCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAA > SRR4302547.5665722/1‑94 (MQ=60)
GCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAAT > SRR4302547.5129505/1‑94 (MQ=60)
GCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAAT > SRR4302547.2655173/1‑94 (MQ=60)
GCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAAT > SRR4302547.5887299/1‑94 (MQ=60)
CCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATG < SRR4302547.2730969/94‑1 (MQ=60)
TGGGTATTCATACATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGC > SRR4302547.2157436/1‑94 (MQ=60)
CGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGC > SRR4302547.5610261/1‑94 (MQ=60)
CGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGC < SRR4302547.4978222/94‑1 (MQ=60)
CGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGC < SRR4302547.2716982/94‑1 (MQ=60)
CGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGC > SRR4302547.2543751/1‑94 (MQ=60)
GGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCG < SRR4302547.3372522/94‑1 (MQ=60)
GGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCG < SRR4302547.5802436/94‑1 (MQ=60)
GGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGGTATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGT < SRR4302547.322393/94‑1 (MQ=60)
GTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTC < SRR4302547.1472537/94‑1 (MQ=60)
ATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTGCA > SRR4302547.3923926/1‑94 (MQ=60)
ATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCA < SRR4302547.4160315/94‑1 (MQ=60)
ATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCA < SRR4302547.9377/94‑1 (MQ=60)
TCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGC > SRR4302547.1931834/1‑94 (MQ=60)
ATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTT < SRR4302547.2284222/94‑1 (MQ=60)
TAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTG < SRR4302547.297886/94‑1 (MQ=60)
AATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTT > SRR4302547.5359194/1‑94 (MQ=60)
AATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTT > SRR4302547.5483749/1‑94 (MQ=60)
AATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTT > SRR4302547.4346430/1‑94 (MQ=60)
acgacgctcttccgatcttgacattATCAATGCAGGTATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGA < SRR4302547.126833/69‑1 (MQ=60)
TCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATA < SRR4302547.4143058/94‑1 (MQ=60)
TCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATA > SRR4302547.1934576/1‑94 (MQ=60)
TCAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATA < SRR4302547.3300827/94‑1 (MQ=60)
TCAGCAAAGAAATCAATGTAGAGATAAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATA > SRR4302547.2524126/1‑94 (MQ=60)
CAGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATAC < SRR4302547.5610223/94‑1 (MQ=60)
AGCAAAGAAGTCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATACG > SRR4302547.1931451/1‑94 (MQ=60)
AGCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATACG > SRR4302547.5320955/1‑94 (MQ=60)
GCAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATACGT > SRR4302547.3173068/1‑94 (MQ=60)
CAAAGAAATCAATGTAGAGATCAATGCAGGTATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTACAGCTTGTTGATACGTA > SRR4302547.6743318/1‑94 (MQ=60)
CAAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATACGTC > SRR4302547.4842896/1‑94 (MQ=60)
AAAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATACGTCA > SRR4302547.4204580/1‑94 (MQ=60)
AAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATACGTCAT < SRR4302547.4108519/94‑1 (MQ=60)
AAGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATACGTCAT < SRR4302547.5198806/94‑1 (MQ=60)
AGAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATACGTCATG > SRR4302547.5530466/1‑94 (MQ=60)
GAAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATACGTCATGA > SRR4302547.5816243/1‑94 (MQ=60)
AAATCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATACGTCATGAG < SRR4302547.5831596/94‑1 (MQ=60)
TCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATACGTCATGAGTTC > SRR4302547.1164464/1‑94 (MQ=60)
TCAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATACGTCATGAGTTC > SRR4302547.5413905/1‑94 (MQ=60)
CAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATACGTCATGAGTTCT > SRR4302547.1693044/1‑94 (MQ=60)
CAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATACGTCATGAGTTCT > SRR4302547.6011332/1‑94 (MQ=60)
CAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATACGTCATGAGTTCT > SRR4302547.1869431/1‑94 (MQ=60)
CAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATACGTCATGAGTTCT > SRR4302547.4412219/1‑94 (MQ=60)
CAATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATACGTCATGAGTTCT < SRR4302547.5642429/94‑1 (MQ=60)
ATGTAGAGATCAATGCAGGTATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATACGTCATGAGTTCTCC > SRR4302547.3718157/1‑94 (MQ=60)
ATGTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATACGTCATGAGTTCTCC > SRR4302547.3742830/1‑94 (MQ=60)
GTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATACGTCATGAGTTCTCCTT < SRR4302547.102287/94‑1 (MQ=60)
GTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATACGTCATGAGTTCTCCTT < SRR4302547.4059311/94‑1 (MQ=60)
GTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATACGTCATGAGTTCTCCTT < SRR4302547.5380800/94‑1 (MQ=60)
GTAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATACGTCATGAGTTCTCCTT < SRR4302547.3400035/94‑1 (MQ=60)
TAGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATACGTCATGAGTTCTCCTTG > SRR4302547.5876507/1‑94 (MQ=60)
AGAGATCAATGCAGGTATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATACGTCATGAGTTCTCCTTGA > SRR4302547.1139417/1‑94 (MQ=60)
AGAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATACGTCATGAGTTCTCCTTGA < SRR4302547.2459384/94‑1 (MQ=60)
GAGATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATACGTCATGAGTTCTCCTTGAT < SRR4302547.552798/94‑1 (MQ=60)
ATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATACGTCATGAGTTCTCCTTGATTAA > SRR4302547.654289/1‑94 (MQ=60)
ATCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATACGTCATGAGTTCTCCTTGATTAA > SRR4302547.1414657/1‑94 (MQ=60)
ATCAATGCAGATATAAAAATAACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATACGTCATGAGTTCTCCTTGATTAA > SRR4302547.6599318/1‑94 (MQ=60)
TCAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATACGTCATGAGTTCTCCTTGATTAAG > SRR4302547.5835233/1‑94 (MQ=60)
CAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATACGTCATGAGTTCTCCTTGATTAAGA > SRR4302547.2024262/1‑94 (MQ=60)
CAATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATACGTCATGAGTTCTCCTTGATTAAGA < SRR4302547.5363233/94‑1 (MQ=60)
CAATGCAGATATAAAAATCACACAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATACGTCATGAGTTCTCCTTGATTcagt > SRR4302547.1911203/1‑90 (MQ=60)
AATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATACGTCATGAGTTCTCCTTGATTAAGAC < SRR4302547.362616/94‑1 (MQ=60)
AATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATACGTCATGAGTTCTCCTTGATTAAGAC > SRR4302547.4443849/1‑94 (MQ=60)
ATGCAGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATACGTCATGAGTTCTCCTTGATTAAGACG < SRR4302547.6119524/94‑1 (MQ=60)
AGATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATACGTCATGAGTTCTCCTTGATTAAGACGCGTC > SRR4302547.4920944/1‑94 (MQ=60)
GATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATACGTCATGAGTTCTCCTTGATTAAGACGCGTCG > SRR4302547.3885088/1‑94 (MQ=60)
GATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATACGTCATGAGTTCTCCTTGATTAAGACGCGTCG < SRR4302547.5703977/94‑1 (MQ=60)
GATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATACGTCATGAGTTCTCCTTGATTAAGACGCGTCG > SRR4302547.3122880/1‑94 (MQ=60)
GTATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATACGTCATGAGTTCTCCTTGATTAAGACGCGTCGT > SRR4302547.2541747/1‑94 (MQ=60)
ATATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATACGTCATGAGTTCTCCTTGATTAAGACGCGTCGT > SRR4302547.6251025/1‑94 (MQ=60)
|
AAAGTCGAGCATGACCGCATTAATGCCTTCCTTGTTTTCCTGCCGGGTATTCATAAATTTCAGCAAAGAAATCAATGTAGAGATCAATGCAGGTATAAAAATCACCCAACCCAAAATCCTTTTCAAAACAGCAATGCGTCCAGCTTGTTGATACGTCATGAGTTCTCCTTGATTAAGACGCGTCGT > NC_000913/1807099‑1807284
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
