Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
593 |
264.2 |
13311096 |
97.8% |
13018251 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,841,925 |
T→C |
H324R (CAC→CGC) |
b1762 ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,841,925 | 0 | T | C | 84.9%
| 541.6
/ 85.3
| 212 | H324R (CAC→CGC) | b1762 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (19/13); new base C (85/95); total (104/108) |
| Fisher's exact test for biased strand distribution p-value = 2.51e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.69e-01 |
Only 100 of 216 total aligned reads displayed.
CCCCGGCAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGTGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAGATATGCCAGTAAAGAAAT > NC_000913/1841834‑1842017
|
ccccGGCAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGTg > 2:1692695/1‑93 (MQ=255)
cccGGCAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCTCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAgcgc > 1:294077/1‑93 (MQ=255)
cccGGCAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAgcgc > 2:4703716/1‑93 (MQ=255)
ggCAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTcc < 2:5108073/93‑1 (MQ=255)
gCAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTccc < 1:153261/93‑1 (MQ=255)
aaaaTTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGTGCTCCCaa < 2:4267361/93‑1 (MQ=255)
aaaaTTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCaa > 1:5666577/1‑93 (MQ=255)
aaaaTTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCaa > 1:331097/1‑93 (MQ=255)
aaaTTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCaaa > 1:4525512/1‑93 (MQ=255)
aaaTTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCaaa > 2:2393120/1‑93 (MQ=255)
aaTTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCaaaa > 1:4220787/1‑93 (MQ=255)
tCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGc < 1:4409644/93‑1 (MQ=255)
cAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCt < 2:3152700/93‑1 (MQ=255)
cAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCt < 1:4330739/93‑1 (MQ=255)
aGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCtt < 1:2186894/93‑1 (MQ=255)
ggTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTc < 2:5284889/92‑1 (MQ=255)
cGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGTGCTCCCAAAACTGCTTGTc < 1:1264952/93‑1 (MQ=255)
gTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCg < 1:1094283/93‑1 (MQ=255)
tttATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGt < 1:4947177/93‑1 (MQ=255)
ttATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTa < 2:4219892/93‑1 (MQ=255)
ttATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTa > 1:4835133/1‑93 (MQ=255)
ttATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTa > 2:3921700/1‑93 (MQ=255)
tGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACg > 2:2095457/1‑93 (MQ=255)
tGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACGGTAGCGCTCCCAAAACTGCTTGTCGTAACg > 2:648978/1‑93 (MQ=255)
gAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGa < 1:3418712/93‑1 (MQ=255)
gTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATa > 1:3665590/1‑93 (MQ=255)
aTTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAac < 2:5681984/93‑1 (MQ=255)
aTTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAac < 2:938449/93‑1 (MQ=255)
aTTTAACGAATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAac < 2:1385374/93‑1 (MQ=255)
tttAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAaca < 1:3854230/93‑1 (MQ=255)
tttAACGGATGAAGCTCCCCGCGGAACATTTCTTATGGGCCACCGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAaca < 2:2286800/93‑1 (MQ=255)
tAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACg > 1:1503798/1‑93 (MQ=255)
tAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACg < 2:5526747/93‑1 (MQ=255)
aaCGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGc > 2:2900627/1‑93 (MQ=255)
aCGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGTGCTCCCAAAACTGCTTGTCGTAACGATAACACGCt > 2:5722558/1‑93 (MQ=255)
ggATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGTGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTc < 2:3014926/93‑1 (MQ=255)
gatgatGGTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGTGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCa > 1:6315725/1‑93 (MQ=255)
atgatgCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCaa < 2:5614652/93‑1 (MQ=255)
tgatgCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAg > 1:5521292/1‑93 (MQ=255)
tgatgCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAg < 1:2588072/93‑1 (MQ=255)
tgatgCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAg > 2:4961990/1‑93 (MQ=255)
gCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCa < 2:1111518/93‑1 (MQ=255)
cTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGTGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAg > 1:6613162/1‑93 (MQ=255)
cTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAg < 2:3145894/93‑1 (MQ=255)
ccccACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCa > 2:3214448/1‑93 (MQ=255)
cccACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCAt < 1:4903003/93‑1 (MQ=255)
cccACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCAt > 2:1682849/1‑93 (MQ=255)
ccACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATc > 2:1018989/1‑93 (MQ=255)
ccACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATc > 2:4850790/1‑93 (MQ=255)
cACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATcc < 1:813440/93‑1 (MQ=255)
ggAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGtt < 1:1911747/93‑1 (MQ=255)
ggAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGtt < 2:214532/93‑1 (MQ=255)
ggAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGtt > 1:5758137/1‑93 (MQ=255)
gAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTa > 1:5341744/1‑93 (MQ=255)
gAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTa > 1:202638/1‑93 (MQ=255)
aCATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAAc > 1:5118151/1‑93 (MQ=255)
aTTTCTTATGGGCCAACGGCATTTCTTACTGTAGTGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACtt < 1:3513995/93‑1 (MQ=255)
tttCTTATGGGCCAACGGCCTTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACttt > 1:6464922/1‑93 (MQ=255)
tttCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACttt > 2:5870775/1‑93 (MQ=255)
tCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCt < 2:1830119/93‑1 (MQ=255)
tCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCt > 1:2501630/1‑93 (MQ=255)
tATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCg > 2:5710698/1‑93 (MQ=255)
tATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCg > 1:4661402/1‑93 (MQ=255)
aTGGGCCAACGGCATTTCTTACTGTAGTGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGa > 1:171676/1‑93 (MQ=255)
aTGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGa < 2:3481981/93‑1 (MQ=255)
aTGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGa < 1:4160583/93‑1 (MQ=255)
tGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGAt < 2:5981265/93‑1 (MQ=255)
gggCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATa < 2:1948589/93‑1 (MQ=255)
gggCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGCCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATa > 1:371850/1‑93 (MQ=255)
ggCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATag < 2:2471551/93‑1 (MQ=255)
ggCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATag < 2:1665591/93‑1 (MQ=255)
gCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATagc < 2:3274076/93‑1 (MQ=255)
gCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATagc < 2:2793782/93‑1 (MQ=255)
gCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATagc > 2:896609/1‑93 (MQ=255)
ccAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATagca > 2:3652546/1‑93 (MQ=255)
ccAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATagca < 1:2435154/93‑1 (MQ=255)
cAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATagcag < 2:3575085/93‑1 (MQ=255)
cAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATagcag > 1:6163182/1‑93 (MQ=255)
aaCGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATagcagc > 1:655939/1‑93 (MQ=255)
cGGCATTTCTTACTGTAGTGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGcagcag > 1:5046898/1‑93 (MQ=255)
ggCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAGa > 2:4928175/1‑93 (MQ=255)
gCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACTCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAGat > 2:766510/1‑93 (MQ=255)
gCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAGat > 2:3668063/1‑93 (MQ=255)
gCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAGat < 2:4742295/93‑1 (MQ=255)
cATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAGata < 2:4560220/93‑1 (MQ=255)
cATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAGata < 2:4454330/93‑1 (MQ=255)
aTTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAGatat > 2:1998206/1‑93 (MQ=255)
aTTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAGatat > 2:1597481/1‑93 (MQ=255)
aTTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAGatat > 1:3008972/1‑93 (MQ=255)
tttCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAGATATg > 1:2666981/1‑93 (MQ=255)
tttCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAGATATg > 2:652017/1‑93 (MQ=255)
ttACTGTAGTGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAGATATGCCAg < 1:4873931/93‑1 (MQ=255)
tACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAGATATGCCAga > 1:3092778/1‑92 (MQ=255)
cTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAGATATGCCAGTaa < 2:721160/93‑1 (MQ=255)
tGTAGTGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAGATATGCCAGTaaa < 2:6126677/93‑1 (MQ=255)
gTAGTGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAGATATGCCAGTaaaa > 1:1888029/1‑92 (MQ=255)
gTAGTGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAGATATGCCAGTAAAg > 1:526363/1‑93 (MQ=255)
tAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAGATATGCCAGTAAAGa < 1:5940322/93‑1 (MQ=255)
tAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAGATATGCCAGTAAAGa > 1:2321024/1‑93 (MQ=255)
tGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAGATATGCCAGTAAAGAAAt < 2:4044080/93‑1 (MQ=255)
|
CCCCGGCAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGTGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAGATATGCCAGTAAAGAAAT > NC_000913/1841834‑1842017
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GCCCCCGGCAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGTGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAGATATGCCAGTAAAGAAAT > NC_000913/1841832‑1842017
|
GCCCCCGGCAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGC < SRR4302547.3168207/94‑1 (MQ=60)
CCCCGGCAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCTCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGC > SRR4302547.299539/1‑94 (MQ=60)
GCAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCA > SRR4302547.4371641/1‑94 (MQ=60)
GCAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCA < SRR4302547.156055/94‑1 (MQ=60)
CAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAA > SRR4302547.5783583/1‑94 (MQ=60)
CAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAA < SRR4302547.4256543/94‑1 (MQ=60)
CAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAA > SRR4302547.337262/1‑94 (MQ=60)
CAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAA < SRR4302547.2885125/94‑1 (MQ=60)
AAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAA > SRR4302547.4619034/1‑94 (MQ=60)
AAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAA > SRR4302547.4306995/1‑94 (MQ=60)
ATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACT > SRR4302547.1973881/1‑94 (MQ=60)
TTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGC < SRR4302547.128623/94‑1 (MQ=60)
TCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCT < SRR4302547.4500533/94‑1 (MQ=60)
CAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTT < SRR4302547.4419850/94‑1 (MQ=60)
CAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTT < SRR4302547.3750814/94‑1 (MQ=60)
AGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTG < SRR4302547.4928353/94‑1 (MQ=60)
AGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTG < SRR4302547.2230749/94‑1 (MQ=60)
GGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGT < SRR4302547.2623394/94‑1 (MQ=60)
CGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGTGCTCCCAAAACTGCTTGTCG < SRR4302547.1290429/94‑1 (MQ=60)
CGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGTGCTCCCAAAACTGCTTGTCG < SRR4302547.6232695/94‑1 (MQ=60)
GTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGT > SRR4302547.2047136/1‑94 (MQ=60)
GTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGT < SRR4302547.1116224/94‑1 (MQ=60)
TTTATGAGTATTTACCGGATGAGGCTCCCCACGGAACATTTCTTATGGGCCAACGGCAGTGCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTA < SRR4302547.5049630/94‑1 (MQ=60)
TTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTA > SRR4302547.4935364/1‑94 (MQ=60)
TTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTA < SRR4302547.5049631/94‑1 (MQ=60)
ATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGTGCTCCCAAAACTGCTTGTCGTAACG < SRR4302547.3897706/94‑1 (MQ=60)
TGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGA > SRR4302547.1931741/1‑94 (MQ=60)
GAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGAT < SRR4302547.2100432/94‑1 (MQ=60)
GAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGAT < SRR4302547.3488318/94‑1 (MQ=60)
GAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGAT > SRR4302547.5124439/1‑94 (MQ=60)
AGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATA > SRR4302547.3740363/1‑94 (MQ=60)
AGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATA < SRR4302547.3100517/94‑1 (MQ=60)
TATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAAC < SRR4302547.5781783/94‑1 (MQ=60)
TTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTATCGATAACAC < SRR4302547.6575377/94‑1 (MQ=60)
TTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACAC < SRR4302547.3932683/94‑1 (MQ=60)
TTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACG > SRR4302547.1533783/1‑94 (MQ=60)
TAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGC < SRR4302547.3499248/94‑1 (MQ=60)
TAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGC > SRR4302547.4757681/1‑94 (MQ=60)
ACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTT > SRR4302547.5020095/1‑94 (MQ=60)
GGATGATGGTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGTGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCA > SRR4302547.6447055/1‑94 (MQ=60)
GGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCA < SRR4302547.5343946/94‑1 (MQ=60)
GGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCA < SRR4302547.752692/94‑1 (MQ=60)
ATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAG < SRR4302547.1772611/94‑1 (MQ=60)
ATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAG > SRR4302547.5635266/1‑94 (MQ=60)
TGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGT < SRR4302547.2640285/94‑1 (MQ=60)
TGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCA < SRR4302547.5846807/94‑1 (MQ=60)
GCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGTGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAG > SRR4302547.6750811/1‑94 (MQ=60)
GCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAG < SRR4302547.3430729/94‑1 (MQ=60)
GCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAG > SRR4302547.2657828/1‑94 (MQ=60)
CTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGC > SRR4302547.5495828/1‑94 (MQ=60)
TCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCA > SRR4302547.890191/1‑94 (MQ=60)
TCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCA < SRR4302547.32740/94‑1 (MQ=60)
CCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCAT < SRR4302547.2455606/94‑1 (MQ=60)
CCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATC < SRR4302547.3023322/94‑1 (MQ=60)
CCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATC < SRR4302547.5004539/94‑1 (MQ=60)
CCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCC < SRR4302547.6705226/94‑1 (MQ=60)
CCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCC > SRR4302547.5151690/1‑94 (MQ=60)
CACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGTGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCG > SRR4302547.4441484/1‑94 (MQ=60)
CACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCG < SRR4302547.828885/94‑1 (MQ=60)
CGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTT > SRR4302547.5877199/1‑94 (MQ=60)
GGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGTGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTA > SRR4302547.6060057/1‑94 (MQ=60)
GGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTA > SRR4302547.5451864/1‑94 (MQ=60)
GGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTA < SRR4302547.1949576/94‑1 (MQ=60)
GGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTA > SRR4302547.206423/1‑94 (MQ=60)
AACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAAC > SRR4302547.4581712/1‑94 (MQ=60)
AACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAAC > SRR4302547.5223605/1‑94 (MQ=60)
ATTTCTTATGGGCCAACGGCCTTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTT > SRR4302547.6599540/1‑94 (MQ=60)
ATTTCTTATGGGCCAACGGCATTTCTTACTGTAGTGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTT < SRR4302547.3585739/94‑1 (MQ=60)
TTCTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCT > SRR4302547.2552172/1‑94 (MQ=60)
CTTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGC > SRR4302547.3628497/1‑94 (MQ=60)
TTATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCG > SRR4302547.4757942/1‑94 (MQ=60)
TATGGGCCAACGGCATTTCTTACTGTAGTGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGA > SRR4302547.174825/1‑94 (MQ=60)
ATGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGAT < SRR4302547.4245345/94‑1 (MQ=60)
TGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATA > SRR4302547.6654252/1‑94 (MQ=60)
TGGGCCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGCCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATA > SRR4302547.378743/1‑94 (MQ=60)
GCCAACGGCATTTCTTACTGTAGTGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCA > SRR4302547.562580/1‑94 (MQ=60)
CCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAG < SRR4302547.1695251/94‑1 (MQ=60)
CCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAG > SRR4302547.6291094/1‑94 (MQ=60)
CCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAG < SRR4302547.2484414/94‑1 (MQ=60)
CCAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAG > SRR4302547.2525024/1‑94 (MQ=60)
CAACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGC > SRR4302547.668018/1‑94 (MQ=60)
ACGGCATTTCTTACTGTAGTGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAG > SRR4302547.5151101/1‑94 (MQ=60)
ACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAG > SRR4302547.4953659/1‑94 (MQ=60)
ACGGCATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAG < SRR4302547.6300772/94‑1 (MQ=60)
CATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAGATAT > SRR4302547.3068805/1‑94 (MQ=60)
CATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAGATAT < SRR4302547.2690997/94‑1 (MQ=60)
ATTTCTTACTGTAGTGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAGATATG < SRR4302547.4394692/94‑1 (MQ=60)
ATTTCTTACTGTAGTGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAGATATG > SRR4302547.2253407/1‑94 (MQ=60)
ATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAGATATG > SRR4302547.2720576/1‑94 (MQ=60)
ATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAGATATG > SRR4302547.3522237/1‑94 (MQ=60)
ATTTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAGATATG < SRR4302547.6615784/94‑1 (MQ=60)
TTCTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAGATATGCC < SRR4302547.154398/94‑1 (MQ=60)
CTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAGATATGCCAG < SRR4302547.4980215/94‑1 (MQ=60)
CTTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAGATATGCCAG < SRR4302547.542937/94‑1 (MQ=60)
TTACTGTAGTGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAGATATGCCAGT < SRR4302547.4974929/94‑1 (MQ=60)
TTACTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAGATATGCCAGA > SRR4302547.3154091/1‑94 (MQ=60)
CTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAGATATGCCAGTAAA < SRR4302547.4176071/94‑1 (MQ=60)
CTGTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAGATATGCCAGTAAA > SRR4302547.1294797/1‑94 (MQ=60)
CTGAAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTCACTTTCTGCGATAGCAGCACATATGCCAGTAAA > SRR4302547.644158/1‑94 (MQ=60)
TGTAGTGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAGATATGCCAGTAAAG > SRR4302547.535879/1‑94 (MQ=60)
TGTAGTGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAGATATGCCAGTAAAA > SRR4302547.1925336/1‑94 (MQ=60)
GTAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAGATATGCCAGTAAAGA > SRR4302547.2368065/1‑94 (MQ=60)
TAGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAGATATGCCAGTAAAGAA < SRR4302547.6063492/94‑1 (MQ=60)
AGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAGATATGCCAGTAAAGAAA < SRR4302547.4499061/94‑1 (MQ=60)
AGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAGATATGCCAGTAAAGAAA < SRR4302547.6439615/94‑1 (MQ=60)
AGCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAGATATGCCAGTAAAGAAA < SRR4302547.5487540/94‑1 (MQ=60)
GCGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAGATATGCCAGTAAAGAAAT > SRR4302547.5947578/1‑94 (MQ=60)
|
GCCCCCGGCAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGTGCTCCCAAAACTGCTTGTCGTAACGATAACACGCTTCAAGTTCAGCATCCGTTAACTTTCTGCGATAGCAGCAGATATGCCAGTAAAGAAAT > NC_000913/1841832‑1842017
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
