Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
593 |
264.2 |
13311096 |
97.8% |
13018251 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,473,878 |
G→A |
P116P (CCG→CCA) |
b2362 → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,473,878 | 0 | G | A | 85.1%
| 578.9
/ 70.5
| 201 | P116P (CCG→CCA) | b2362 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (15/15); new base A (75/96); total (90/111) |
| Fisher's exact test for biased strand distribution p-value = 5.56e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.76e-01 |
Only 100 of 205 total aligned reads displayed.
AAAAGAAACCGGAGAATGGCAGTGGACATTTCAGGTTGGGGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCGGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAACGAATCAGCAGCCTAGAGGTTCGAGACGAT > NC_000913/2473788‑2473967
|
aaaaGAAACCGGAGAATGGCAGTGGACATTTCAGGTTGGGGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGAACCAGa > 2:4377742/1‑93 (MQ=255)
aGAAACCGGAGAATGGCAGTGGACATTTCAGGTTGGGGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGc > 1:4099546/1‑93 (MQ=255)
gAAACCGGAGAATGGCAGTGGACATTTCAGGTTGGGGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCt > 2:5637070/1‑93 (MQ=255)
aaCCGGAGAATGGCAGTGGACATTTCAGGTTGGGGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTgg > 1:4226164/1‑93 (MQ=255)
aCCGGAGAATGGCAGTGGACATTTCAGGTTGGGGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGa < 1:1372919/93‑1 (MQ=255)
aCCGGAGAATGGCAGTGGACATTTCAGGTTGGGGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGa > 1:2463730/1‑93 (MQ=255)
cGGAGAATGGCAGTGGACATTTCAGGTTGGGGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGc < 1:3625246/93‑1 (MQ=255)
cGGAGAATGGCAGTGGACATTTCAGGTTGGGGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGc < 1:3327202/93‑1 (MQ=255)
cGGAGAATGGCAGTGGACATTTCAGGTTGGGGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGc > 1:2858627/1‑93 (MQ=255)
ggAGAATGGCAGTGGACATTTCAGGTTGGGGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCa > 1:6655409/1‑93 (MQ=255)
ggAGAATGGCAGTGGACATTTCAGGTTGGGGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCa < 2:5392476/93‑1 (MQ=255)
ggAGAATGGCAGTGGACATTTCAGGTTGGGGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCa > 1:1476259/1‑93 (MQ=255)
aaTGGCAGTGGACATTTCAGGTTGGGGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAAt < 1:1903579/93‑1 (MQ=255)
aaTGGCAGTGGACATTTCAGGTTGGGGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAAt > 2:3924635/1‑93 (MQ=255)
aaTGGCAGTGGACATTTCAGGTTGGGGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAAt < 2:538354/93‑1 (MQ=255)
aTGGCAGTGGACATTTCAGGTTGGGGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATg > 2:3189899/1‑93 (MQ=255)
tGGCAGTGGACATTTCAGGTTGGGGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGa > 2:5173699/1‑93 (MQ=255)
tGGCAGTGGACATTTCAGGTTGGGGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGa > 2:5592240/1‑93 (MQ=255)
ggCAGTGGACATTTCAGGTTGGGGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGAc < 1:2238836/93‑1 (MQ=255)
ggCAGTGGACATTTCAGGTTGGGGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGAc > 1:6553407/1‑93 (MQ=255)
cAGTGGACATTTCAGGTTGGGGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACca > 1:4532147/1‑93 (MQ=255)
gTGGACATTTCAGGTTGGGGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCGGAGGCTGGAGCATAATGACcaca > 2:3610286/1‑93 (MQ=255)
tGGACATTTCAGGTTGGGGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAACGACCACAt < 1:6501360/93‑1 (MQ=255)
ggACATTTCAGGTTGGGGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACAtt > 2:1208117/1‑93 (MQ=255)
ggACATTTCAGGTTGGGGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACAtt < 1:1285234/93‑1 (MQ=255)
aCATTTCAGGTTGGGGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTa > 2:4585338/1‑93 (MQ=255)
aTTTCAGGTTGGGGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTAcc > 2:2230203/1‑93 (MQ=255)
ttCAGGTTGGGGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCaa < 1:5058615/93‑1 (MQ=255)
tCAGGTTGGGGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAAt < 1:3882151/93‑1 (MQ=255)
tCAGGTTGGGGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAAt > 2:1867121/1‑93 (MQ=255)
cAGGTTGGGGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATa < 2:5726848/93‑1 (MQ=255)
ggTTGGGGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCGGAGGCTGGAGCATAATGACCACATTTACCAATaaa < 2:1816462/93‑1 (MQ=255)
ggTTGGGGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATaaa > 2:797825/1‑93 (MQ=255)
gTTGGGGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAg < 2:5571029/93‑1 (MQ=255)
tGGGGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGaa > 2:6017548/1‑93 (MQ=255)
tGGGGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGaa < 2:4271047/93‑1 (MQ=255)
ggggACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAAc > 1:1563918/1‑93 (MQ=255)
gggACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACt < 2:5117502/93‑1 (MQ=255)
ggACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCGGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTg < 1:5879154/93‑1 (MQ=255)
ggACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTg < 2:6354575/93‑1 (MQ=255)
ggACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTg < 2:411564/93‑1 (MQ=255)
gACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGa < 1:785863/93‑1 (MQ=255)
aCCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGAt < 2:1039287/93‑1 (MQ=255)
ccTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCGGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGAtt < 2:463592/93‑1 (MQ=255)
cTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTa > 2:2282309/1‑93 (MQ=255)
cTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTa > 1:2727410/1‑93 (MQ=255)
tGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATATAGAACTGATTaaa < 2:1953639/93‑1 (MQ=255)
tGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTaaa < 1:3965822/93‑1 (MQ=255)
gAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAg < 1:4757012/93‑1 (MQ=255)
aaaaCGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGa < 2:4306752/93‑1 (MQ=255)
aaaCGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGaa > 1:2409641/1‑93 (MQ=255)
aaaCGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGaa < 1:5999404/93‑1 (MQ=255)
cGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATc < 2:5893923/93‑1 (MQ=255)
tCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCGGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCaa < 2:4040216/93‑1 (MQ=255)
tCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCGGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCaa > 1:2182876/1‑93 (MQ=255)
cAATATCACTCACTGGGCAGTAATGCCAAAAGCACCGGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCaaa < 1:2966498/93‑1 (MQ=255)
cAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCaaa < 1:1079555/93‑1 (MQ=255)
atatCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGa < 2:14517/93‑1 (MQ=255)
tatCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGaa < 1:6233354/93‑1 (MQ=255)
tatCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGaa < 1:3644895/93‑1 (MQ=255)
tcactcacTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAACg < 2:5612931/93‑1 (MQ=255)
cactcactGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAACGa < 2:6635376/93‑1 (MQ=255)
actcactGGGCAGTAATGCCAAAAGCACCGGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAACGaa < 1:1427519/93‑1 (MQ=255)
ctcactGGGCAGTAATGCCAAAAGCACCGGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAACGAAt > 2:603709/1‑93 (MQ=255)
ctcactGGGCAGTAATGCCAAAAGCACCGGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAACGAAt > 2:2823630/1‑93 (MQ=255)
atcactGGGCAGTAAATGCAAAAGCACCGGAGGCTGGAGCATAATGGCCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAACGAAt < 2:5072300/92‑1 (MQ=255)
tcactGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAACGAATc < 2:3669513/93‑1 (MQ=255)
tcactGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAACGAATc < 1:199203/93‑1 (MQ=255)
cactGGGCAGTAATGCCAAAAGCACCGGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAACGAATca > 1:564542/1‑93 (MQ=255)
cactGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAACGAATca > 2:5303973/1‑93 (MQ=255)
cactGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAACGAATca < 1:4288929/93‑1 (MQ=255)
cactGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAAAGAATca > 1:2630289/1‑93 (MQ=255)
ctGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAACGAATcagc > 1:927351/1‑93 (MQ=255)
tGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAACGAATcagca > 1:3944577/1‑93 (MQ=255)
tGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAACGAATcagca > 1:1871871/1‑93 (MQ=255)
gggCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAACGAATcagcag > 1:3502467/1‑93 (MQ=255)
gggCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAACGAATcagcag > 1:4988777/1‑93 (MQ=255)
ggCAGTAATGCCAAAAGCACCGGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAACGAATCagcagc > 2:5505072/1‑93 (MQ=255)
ggCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAACGAATCagcagc > 2:6404608/1‑93 (MQ=255)
gCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAACGAATCAGCAGcc > 1:6342495/1‑93 (MQ=255)
cAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAACGAATCAGCAGCCt < 2:2991771/93‑1 (MQ=255)
aGTAATGCCAAAAGCACCGGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAACGAATCAGCAGCCTa > 2:1627407/1‑93 (MQ=255)
tAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAACGAATCAGCAGCCTaga > 2:1727614/1‑93 (MQ=255)
tAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAACGAATCAGCAGCCTaga > 2:571053/1‑93 (MQ=255)
aaTGCCAAAAGCACCGGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAACGAATCAGCAGCCTagag < 2:3986935/93‑1 (MQ=255)
aaTGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAACGAATCAGCAGCCTagag < 1:5480700/93‑1 (MQ=255)
aTGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAACGAATCAGCAGCCTAGAgg > 2:2485072/1‑93 (MQ=255)
gCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAACGAATCAGCAGCCTAGAGGtt < 1:385241/93‑1 (MQ=255)
gCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAACGAATCAGCAGCCTAGAGGtt < 2:4826995/93‑1 (MQ=255)
gCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAACGAATCAGCAGCCTAGAGGtt < 2:1473410/93‑1 (MQ=255)
ccAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAACGAATCAGCAGCCTAGAGGTTc < 1:1532026/93‑1 (MQ=255)
cAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAACGAATCAGCAGCCTAGAGGTTCg > 1:1820922/1‑93 (MQ=255)
cAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAACGAATCAGCAGCCTAGAGGTTCg > 1:3597988/1‑93 (MQ=255)
cAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAACGAATCAGCAGCCTAGAGGTTCg > 2:3455923/1‑93 (MQ=255)
aaaaGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAACGAATCAGCAGCCTAGAGGTTCga < 1:5706726/93‑1 (MQ=255)
aaaaGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAACGAATCAGCAGCCTAGAGGTTCga > 2:4684305/1‑93 (MQ=255)
aaGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAACGAATCAGCAGCCTAGAGGTTCgaga < 1:3032336/93‑1 (MQ=255)
aGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAACGAATCAGCAGCCTAGAGGTTCGAGAc < 1:3607491/93‑1 (MQ=255)
cACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAACGAATCAGCAGCCTAGAGGTTCGAGACGa < 2:4516643/93‑1 (MQ=255)
cACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAACGAATCAGCAGCCTAGAGGTTCGAGACGa > 2:2793577/1‑93 (MQ=255)
|
AAAAGAAACCGGAGAATGGCAGTGGACATTTCAGGTTGGGGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCGGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAACGAATCAGCAGCCTAGAGGTTCGAGACGAT > NC_000913/2473788‑2473967
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ACAAAAAGAAACCGGAGAATGGCAGTGGACATTTCAGGTTGGGGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCGGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAACGAATCAGCAGCCTAGAGGTTCGAGACGATATTG > NC_000913/2473785‑2473971
|
ACAAAAAGAAACCGGAGAATGGCAGTGGACATTTCAGGTTGGGGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCA > SRR4302547.5888933/1‑94 (MQ=60)
CAAAAAGAAACCGGAGAATGGCAGTGGACATTTCAGGTTGGGGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAG < SRR4302547.342738/94‑1 (MQ=60)
CAAAAAGAAACCGGAGAATGGCAGTGGACATTTCAGGTTGGGGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAG > SRR4302547.787583/1‑94 (MQ=60)
AAAAAGAAACCGGAGAATGGCAGTGGACATTTCAGGTTGGGGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGA > SRR4302547.3677532/1‑94 (MQ=60)
AAAGAAACCGGAGAATGGCAGTGGACATTTCAGTTTGGGGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGG < SRR4302547.600288/94‑1 (MQ=60)
AAGAAACCGGAGAATGGCAGTGGACATTTCAGGTTGGGGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGC > SRR4302547.4182915/1‑94 (MQ=60)
AGAAACCGGAGAATGGCAGTGGACATTTCAGGTTGGGGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCT < SRR4302547.1922671/94‑1 (MQ=60)
AAACCGGAGAATGGCAGTGGACATTTCAGGTTGGGGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGG > SRR4302547.4312524/1‑94 (MQ=60)
AACCGGAGAATGGCAGTGGACATTTCAGGTTGGGGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGA < SRR4302547.508491/94‑1 (MQ=60)
AACCGGAGAATGGCAGTGGACATTTCAGGTTGGGGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGA > SRR4302547.2513531/1‑94 (MQ=60)
AACCGGAGAATGGCAGTGGACATTTCAGGTTGGGGACCTTGAAAACGTCAATATCACTAACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGA < SRR4302547.67916/94‑1 (MQ=60)
ACCGGAGAATGGCAGTGGACATTTCAGGTTGGGGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAG > SRR4302547.5798510/1‑94 (MQ=60)
ACCGGAGAATGGCAGTGGACATTTCAGGTTGGGGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAG < SRR4302547.2555461/94‑1 (MQ=60)
ACCGGAGAATGGCAGTGGACATTTCAGGTTGGGGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAG < SRR4302547.1400457/94‑1 (MQ=60)
CCGGAGAATGGCAGTGGACATTTCAGGTTGGGGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGC > SRR4302547.4001005/1‑94 (MQ=60)
CCGGAGAATGGCAGTGGACATTTCAGGTTGGGGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGC > SRR4302547.2915740/1‑94 (MQ=60)
CCGGAGAATGGCAGTGGACATTTCAGGTTGGGGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGC > SRR4302547.2084659/1‑94 (MQ=60)
CGGAGAATGGCAGTGGACATTTCAGGTTGGGGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCGGAGGCTGGAGCA < SRR4302547.2268993/94‑1 (MQ=60)
CGGAGAATGGCAGTGGACATTTCAGGTTGGGGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCA > SRR4302547.6794339/1‑94 (MQ=60)
CGGAGAATGGCAGTGGACATTTCAGGTTGGGGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCA > SRR4302547.1505749/1‑94 (MQ=60)
CGGAGAATGGCAGTGGACATTTCAGGTTGGGGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCA < SRR4302547.3394444/94‑1 (MQ=60)
CGGAGAATGGCAGTGGACATTTCAGGTTGGGGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCA < SRR4302547.3699186/94‑1 (MQ=60)
GGAGAATGGCAGTGGACATTTCAGGTTGGGGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCAT > SRR4302547.5375373/1‑94 (MQ=60)
AATGGCAGTGGACATTTCAGGTTGGGGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATG < SRR4302547.1941240/94‑1 (MQ=60)
ATGGCAGTGGACATTTCAGGTTGGGGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGA > SRR4302547.328980/1‑94 (MQ=60)
TGGCAGTGGACATTTCAGGTTGGGGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGAC > SRR4302547.6689834/1‑94 (MQ=60)
GGCAGTGGACATTTCAGGTTGGGGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACC < SRR4302547.2283989/94‑1 (MQ=60)
GCAGTGGACATTTCAGGTTGGGGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCA > SRR4302547.4625822/1‑94 (MQ=60)
AGTGGACATTTCAGGTTGGGGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCGGAGGCTGGAGCATAATGACCACA > SRR4302547.3594387/1‑94 (MQ=60)
AGTGGACATTTCAGGTTGGGGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACA < SRR4302547.148818/94‑1 (MQ=60)
GTGGACATTTCAGGTTGGGGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACAT < SRR4302547.4131303/94‑1 (MQ=60)
GTGGACATTTCAGGTTGGGGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACAT < SRR4302547.2783404/94‑1 (MQ=60)
GTGGACATTTCAGGTTGGGGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACAT < SRR4302547.3022534/94‑1 (MQ=60)
TGGACATTTCAGGTTGGGGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAACGACCACATT < SRR4302547.6636688/94‑1 (MQ=60)
GGACATTTCAGGTTGGGGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTT < SRR4302547.1311120/94‑1 (MQ=60)
CATTTCAGGTTGGGGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACC < SRR4302547.4891713/94‑1 (MQ=60)
TTTCAGGTTGGGGACCTTGAAAACGTAAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAA < SRR4302547.5893373/94‑1 (MQ=60)
TTCAGGTTGGGGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAAT < SRR4302547.5163016/94‑1 (MQ=60)
TCAGGTTGGGGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATA < SRR4302547.3961128/94‑1 (MQ=60)
TGGGGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAAC > SRR4302547.1595072/1‑94 (MQ=60)
TGGGGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAAC > SRR4302547.2450254/1‑94 (MQ=60)
GGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCGGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGA < SRR4302547.6000872/94‑1 (MQ=60)
GGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGA > SRR4302547.3759970/1‑94 (MQ=60)
GGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGA > SRR4302547.5729539/1‑94 (MQ=60)
GACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGAT < SRR4302547.800732/94‑1 (MQ=60)
ACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATT > SRR4302547.4718314/1‑94 (MQ=60)
CCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCGGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTA > SRR4302547.6256158/1‑94 (MQ=60)
CCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTA < SRR4302547.186158/94‑1 (MQ=60)
CCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTA > SRR4302547.2782167/1‑94 (MQ=60)
TTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAA > SRR4302547.1589760/1‑94 (MQ=60)
TGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAG < SRR4302547.6487153/94‑1 (MQ=60)
TGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAG < SRR4302547.4046474/94‑1 (MQ=60)
GAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGA < SRR4302547.4855577/94‑1 (MQ=60)
AAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAA > SRR4302547.2458425/1‑94 (MQ=60)
AAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTCACCAATAAAGAACTGATTAAAGAA > SRR4302547.6656306/1‑94 (MQ=60)
AAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAA < SRR4302547.6123912/94‑1 (MQ=60)
AACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCGGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAAT < SRR4302547.6413714/94‑1 (MQ=60)
ACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATC > SRR4302547.2743732/1‑94 (MQ=60)
GTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCGGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAA > SRR4302547.3406368/1‑94 (MQ=60)
GTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCGGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAA > SRR4302547.2226606/1‑94 (MQ=60)
GTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCGGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAA > SRR4302547.3068602/1‑94 (MQ=60)
GTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAA > SRR4302547.1156264/1‑94 (MQ=60)
CAATATCACTCACTGGGCAGTAATGCCAAAAGCACCGGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAG < SRR4302547.3025537/94‑1 (MQ=60)
CAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAG < SRR4302547.175831/94‑1 (MQ=60)
CAATATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAG < SRR4302547.1101095/94‑1 (MQ=60)
TATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAAC < SRR4302547.3719244/94‑1 (MQ=60)
TATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAAC < SRR4302547.6362849/94‑1 (MQ=60)
ATCACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAACG > SRR4302547.4347474/1‑94 (MQ=60)
ACTCACTGGGCAGTAATGCCAAAAGCACCGGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAACGAAT < SRR4302547.1456077/94‑1 (MQ=60)
ACTCACTGGGCAGTAATGCCAAAAGCACCGGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAACGAAT < SRR4302547.88734/94‑1 (MQ=60)
ACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAACGAAT > SRR4302547.4041229/1‑94 (MQ=60)
ACTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAACGAAT < SRR4302547.1403839/94‑1 (MQ=60)
CTCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAACGAATC > SRR4302547.675206/1‑94 (MQ=60)
TCACTGGGCAGTAATGCCAAAAGCACCGGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAACGAATCA > SRR4302547.574698/1‑94 (MQ=60)
TCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAACGAATCA < SRR4302547.2497773/94‑1 (MQ=60)
TCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAACGAATCA < SRR4302547.202918/94‑1 (MQ=60)
TCACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAAAGAATCA > SRR4302547.2683265/1‑94 (MQ=60)
CACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAACGAATCAG < SRR4302547.4377077/94‑1 (MQ=60)
ACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAACGAATCAGC > SRR4302547.945259/1‑94 (MQ=60)
ACTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAACGAATCAGC > SRR4302547.1522683/1‑94 (MQ=60)
CTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAACGAATCAGCA > SRR4302547.4024807/1‑94 (MQ=60)
CTGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAACGAATCAGCA > SRR4302547.1908852/1‑94 (MQ=60)
TGGGCAGTAATGCCAAAAGCACCGGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAACGAATCAGCAG > SRR4302547.3939138/1‑94 (MQ=60)
TGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAACGAATCAGCAG > SRR4302547.1325155/1‑94 (MQ=60)
TGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAACGAATCAGCAG > SRR4302547.5091907/1‑94 (MQ=60)
TGGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAACGAATCAGCAG > SRR4302547.3573942/1‑94 (MQ=60)
GGGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAACGAATCAGCAGC > SRR4302547.4394502/1‑94 (MQ=60)
GGCAGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAACGAATCAGCAGCC > SRR4302547.6474576/1‑94 (MQ=60)
AGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAACGAATCAGCAGCCTAG > SRR4302547.5882435/1‑94 (MQ=60)
AGTAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAACGAATCAGCAGCCTAG > SRR4302547.3686477/1‑94 (MQ=60)
TAATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAACGAATCAGCAGCCTAGAG > SRR4302547.3699294/1‑94 (MQ=60)
AATGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAACGAATCAGCAGCCTAGAGG < SRR4302547.5593869/94‑1 (MQ=60)
TGCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAACGAATCAGCAGCCTAGAGGTT < SRR4302547.4232325/94‑1 (MQ=60)
GCCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAACGAATCAGCAGCCTAGAGGTTC < SRR4302547.392383/94‑1 (MQ=60)
CCAAAAGCACCGGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAACGAATCAGCAGCCTAGAGGTTCG < SRR4302547.3118683/94‑1 (MQ=60)
CCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAACGAATCAGCAGCCTAGAGGTTCG < SRR4302547.1562521/94‑1 (MQ=60)
CCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAACGAATCAGCAGCCTAGAGGTTCG > SRR4302547.1856919/1‑94 (MQ=60)
CCAAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAACGAATCAGCAGCCTAGAGGTTCG > SRR4302547.3671362/1‑94 (MQ=60)
AAAAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAACGAATCAGCAGCCTAGAGGTTCGAG < SRR4302547.5824612/94‑1 (MQ=60)
AAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAACGAATCAGCAGCCTAGAGGTTCGAGAC < SRR4302547.3092637/94‑1 (MQ=60)
AAGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAACGAATCAGCAGCCTAGAGGTTCGAGAC < SRR4302547.1944159/94‑1 (MQ=60)
AGCACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAACGAATCAGCAGCCTAGAGGTTCGAGACG < SRR4302547.3681059/94‑1 (MQ=60)
ACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAACGAATCAGCAGCCTAGAGGTTCGAGACGATA > SRR4302547.3343235/1‑94 (MQ=60)
ACCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAACGAATCAGCAGCCTAGAGGTTCGAGACGATA > SRR4302547.2387358/1‑94 (MQ=60)
CCAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAACGAATCAGCAGCCTAGAGGTTCGAGACGATAT < SRR4302547.1692126/94‑1 (MQ=60)
CAGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAACGAATCAGCAGCCTAGAGGTTCGAGACGATATT < SRR4302547.6574185/94‑1 (MQ=60)
AGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAACGAATCAGCAGCCTAGAGGTTCGAGACGATATTG < SRR4302547.10935/94‑1 (MQ=60)
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ACAAAAAGAAACCGGAGAATGGCAGTGGACATTTCAGGTTGGGGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCGGAGGCTGGAGCATAATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAACGAATCAGCAGCCTAGAGGTTCGAGACGATATTG > NC_000913/2473785‑2473971
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
