Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
593 |
264.2 |
13311096 |
97.8% |
13018251 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,819,446 |
G→C |
G196G (GGC→GGG) |
alaS ← |
alanyl‑tRNA synthetase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,819,446 | 0 | G | C | 100.0%
| 786.6
/ NA
| 223 | G196G (GGC→GGG) | alaS | alanyl‑tRNA synthetase |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base C (128/95); total (128/95) |
Only 100 of 232 total aligned reads displayed.
CGTGCCATCGGCCTGGCGGTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGGCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTGCCAGAAGTTGTCAGA > NC_000913/2819356‑2819535
|
cGTGCCATCGGCCTGGCGGTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGccc > 1:5581251/1‑93 (MQ=255)
tCGGCCTGGCGGTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCaa > 2:2104468/1‑93 (MQ=255)
cGGCCTGGCGGTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCaaa > 2:3208279/1‑93 (MQ=255)
ggCCTGGCGGTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAAt > 2:3068353/1‑93 (MQ=255)
gCCTGGCGGTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAAtg > 2:3686403/1‑93 (MQ=255)
ccTGGCGGTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAAtgt < 2:2009062/93‑1 (MQ=255)
cTGGCGGTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAAtgtg < 1:5977575/93‑1 (MQ=255)
cTGGCGGTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAAtgcg > 2:2660586/1‑91 (MQ=255)
tGGCGGTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTgg < 1:4863415/93‑1 (MQ=255)
ggCGTTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGt < 2:1448589/93‑1 (MQ=255)
ggCGGTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGt < 2:2500300/93‑1 (MQ=255)
gCGGTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTc > 1:5313671/1‑93 (MQ=255)
gCGGTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTc < 2:4587213/93‑1 (MQ=255)
gCGGTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGCTc > 2:5237684/1‑93 (MQ=255)
ggTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGc > 1:14824/1‑93 (MQ=255)
ggTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGc < 2:1880940/93‑1 (MQ=255)
ggTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGc < 1:774334/93‑1 (MQ=255)
ggTTGAACTGCATGAAGACGATGTTCCAGACCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGc > 2:4038005/1‑93 (MQ=255)
tGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGt < 1:549076/93‑1 (MQ=255)
gAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTg > 2:1940961/1‑93 (MQ=255)
aaCTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGa > 2:6288995/1‑93 (MQ=255)
aaCTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGa > 1:3498823/1‑93 (MQ=255)
aCTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGAt < 1:1729628/93‑1 (MQ=255)
cTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATc < 2:4742344/93‑1 (MQ=255)
cTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATc < 1:3392664/93‑1 (MQ=255)
tGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCg > 2:3533413/1‑93 (MQ=255)
tGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCg < 1:3857063/93‑1 (MQ=255)
gCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGt < 1:2390623/93‑1 (MQ=255)
cATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTa < 1:1878911/93‑1 (MQ=255)
aTGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTag > 2:5639120/1‑93 (MQ=255)
gAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTagaa < 1:4189174/93‑1 (MQ=255)
gAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTagaa < 2:5329089/93‑1 (MQ=255)
aaGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTagaag < 2:1135257/93‑1 (MQ=255)
aGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTagaaga < 1:5859076/93‑1 (MQ=255)
gACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGAt > 2:5681581/1‑93 (MQ=255)
aCGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGAtt < 2:930017/93‑1 (MQ=255)
gATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTc < 1:5330955/93‑1 (MQ=255)
aTGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCg > 1:2889804/1‑93 (MQ=255)
gTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGt < 2:1259606/93‑1 (MQ=255)
ttCCAGATCTCAATGTAGCGGTCTCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAACGTGGTCGCCGTGATCGTAGAAGATTTCGGTg < 2:865519/93‑1 (MQ=255)
tCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGc < 1:1838614/93‑1 (MQ=255)
cAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCAc > 2:675182/1‑93 (MQ=255)
cAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCAc > 2:3903352/1‑93 (MQ=255)
cAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCACCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCAc > 1:6553867/1‑93 (MQ=255)
aGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACg > 1:3822125/1‑93 (MQ=255)
gATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACgg > 1:198096/1‑93 (MQ=255)
gATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACgg > 1:2306275/1‑93 (MQ=255)
gATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACgg > 1:6537932/1‑93 (MQ=255)
aTCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACggg < 1:3993658/93‑1 (MQ=255)
tctcAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGc > 2:5517227/1‑93 (MQ=255)
tctcAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGc < 1:98388/93‑1 (MQ=255)
tctcAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGc > 1:1615085/1‑93 (MQ=255)
tctcAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGc > 2:1637657/1‑93 (MQ=255)
tctcAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGc > 2:3162833/1‑93 (MQ=255)
tcAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCg > 1:1626163/1‑93 (MQ=255)
tcAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCg > 2:4724834/1‑93 (MQ=255)
tcAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCg > 1:1079972/1‑93 (MQ=255)
aaTGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCa > 1:4634309/1‑93 (MQ=255)
tGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACg > 2:4412835/1‑93 (MQ=255)
tGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACg < 1:2189707/93‑1 (MQ=255)
tGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACg < 2:6464256/93‑1 (MQ=255)
gTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACgg > 2:3616800/1‑93 (MQ=255)
aGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGAc > 2:5526850/1‑93 (MQ=255)
cGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCa < 2:2748282/93‑1 (MQ=255)
gTCGCCTGCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAgt < 1:2792490/93‑1 (MQ=255)
gTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAgt > 1:5711107/1‑93 (MQ=255)
gCCGTCTTCTTCCGTGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTc > 1:4448945/1‑93 (MQ=255)
gCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTc > 2:5076053/1‑93 (MQ=255)
ccGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCa > 1:1555135/1‑93 (MQ=255)
ccGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCa > 1:4395222/1‑93 (MQ=255)
gTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCAcc > 1:3094816/1‑93 (MQ=255)
tcttctTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCAccc > 1:4978130/1‑93 (MQ=255)
tcttctTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCAccc > 1:2409639/1‑93 (MQ=255)
tcttctTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCAccc > 2:641733/1‑93 (MQ=255)
tcttctTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCAccc > 1:6189773/1‑93 (MQ=255)
cttcttCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCa < 2:2187223/93‑1 (MQ=255)
cttcttCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCa < 1:4877276/93‑1 (MQ=255)
tcttcCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATc < 1:3691909/93‑1 (MQ=255)
tcttcCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATc > 1:5794525/1‑93 (MQ=255)
cttcCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCt < 1:3245432/93‑1 (MQ=255)
cctcCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCAGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCCCCCATCt < 2:5915274/91‑1 (MQ=255)
tcCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTGc > 1:1789488/1‑93 (MQ=255)
cGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTGCCa < 1:2073729/93‑1 (MQ=255)
ggCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTGCCAGa < 1:5456287/93‑1 (MQ=255)
ggCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTGCCAGa > 1:6429350/1‑93 (MQ=255)
ggCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTGCCAGa > 1:2319735/1‑93 (MQ=255)
gCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTGCCAGaa < 2:6359825/93‑1 (MQ=255)
cTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTGCCAGAAg < 2:1547297/93‑1 (MQ=255)
ttCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTGCCAGAAGt > 1:5161280/1‑93 (MQ=255)
tCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTGCCAGAAGtt < 2:1193986/93‑1 (MQ=255)
cccGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTGCCAGAAGTTg < 2:5113400/93‑1 (MQ=255)
ccGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTGCCAGAAGTTGt > 1:3287815/1‑93 (MQ=255)
ccGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTGCCAGAAGTTGt < 1:5660392/93‑1 (MQ=255)
cGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTGCCAGAAGTTGTc < 2:1026545/93‑1 (MQ=255)
cGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTGCCAGAAGTTGTc < 2:1836050/93‑1 (MQ=255)
ggAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTGCCAGAAGTTGTCa < 2:5973655/93‑1 (MQ=255)
ggAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTGCCAGAAGTTGTCa > 1:887233/1‑93 (MQ=255)
ggAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTGCCAGAAGTTGTCa < 1:1024912/93‑1 (MQ=255)
gAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTGCCAGAAGTTGTCAg < 2:4028136/93‑1 (MQ=255)
aGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTGCCAGAAGTTGTCAGa < 2:6147862/93‑1 (MQ=255)
|
CGTGCCATCGGCCTGGCGGTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGGCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTGCCAGAAGTTGTCAGA > NC_000913/2819356‑2819535
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ATCGTGCCATCGGCCTGGCGGTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGGCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTGCCAGAAGTTGTCAGATGCG > NC_000913/2819354‑2819539
|
ATCGTGCCATCGGCCTGGCGGTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCC > SRR4302547.2964029/1‑94 (MQ=60)
ATCGTGCCATCGGCCTGGCGGTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCC > SRR4302547.1310652/1‑94 (MQ=60)
TCGTGCCATCGGCCTGGCGGTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCC > SRR4302547.5696375/1‑94 (MQ=60)
GGCCTGGCGGTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATG > SRR4302547.564878/1‑94 (MQ=60)
GCCTGGCGGTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGT < SRR4302547.964906/94‑1 (MQ=60)
CTGGCGGTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCCAATGTGG > SRR4302547.3162551/1‑94 (MQ=60)
CTGGCGGTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGG < SRR4302547.6101565/94‑1 (MQ=60)
CTGGCGGTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGG > SRR4302547.4811794/1‑94 (MQ=60)
TGGCGGTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGT < SRR4302547.3458415/94‑1 (MQ=60)
TGGCGGTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGT < SRR4302547.4964192/94‑1 (MQ=60)
GGCGGTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTC > SRR4302547.5423254/1‑94 (MQ=60)
GGCGGTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTC < SRR4302547.1883844/94‑1 (MQ=60)
GGCGGTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTC < SRR4302547.1752773/94‑1 (MQ=60)
GCGGTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCTCCGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCG < SRR4302547.1931613/94‑1 (MQ=60)
CGGTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAAgggggtggc > SRR4302547.1787597/1‑85 (MQ=60)
CGGTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGC > SRR4302547.5425833/1‑94 (MQ=60)
CGGTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGC > SRR4302547.15099/1‑94 (MQ=60)
GGTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCC < SRR4302547.788974/94‑1 (MQ=60)
TGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTG < SRR4302547.558987/94‑1 (MQ=60)
TGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTG > SRR4302547.892987/1‑94 (MQ=60)
GAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGA > SRR4302547.3570228/1‑94 (MQ=60)
AACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGAT > SRR4302547.1091268/1‑94 (MQ=60)
ACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATC < SRR4302547.1763602/94‑1 (MQ=60)
CTGCATGAAGACGATTTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCG < SRR4302547.5985501/94‑1 (MQ=60)
CTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCG < SRR4302547.3461688/94‑1 (MQ=60)
TGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGT < SRR4302547.3935563/94‑1 (MQ=60)
TCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTA < SRR4302547.4964925/94‑1 (MQ=60)
GCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTA < SRR4302547.2439043/94‑1 (MQ=60)
GCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTA < SRR4302547.4488810/94‑1 (MQ=60)
CATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAG < SRR4302547.1916030/94‑1 (MQ=60)
CATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAG > SRR4302547.5967801/1‑94 (MQ=60)
TGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCTTAGAA > SRR4302547.3327484/1‑94 (MQ=60)
TGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAA < SRR4302547.5189573/94‑1 (MQ=60)
TGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAA < SRR4302547.5596833/94‑1 (MQ=60)
TGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAA < SRR4302547.4644220/94‑1 (MQ=60)
GAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAG > SRR4302547.6687759/1‑94 (MQ=60)
GAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAG < SRR4302547.2443123/94‑1 (MQ=60)
GAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAG < SRR4302547.4274594/94‑1 (MQ=60)
AGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGAT < SRR4302547.5980324/94‑1 (MQ=60)
AGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGAT < SRR4302547.4204431/94‑1 (MQ=60)
AGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGAT > SRR4302547.1627500/1‑94 (MQ=60)
GACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATT < SRR4302547.20842/94‑1 (MQ=60)
GACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATT > SRR4302547.1574890/1‑94 (MQ=60)
ACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTT < SRR4302547.5501377/94‑1 (MQ=60)
ACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTT > SRR4302547.6784646/1‑94 (MQ=60)
GATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCG > SRR4302547.2363594/1‑94 (MQ=60)
GATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCG < SRR4302547.5440832/94‑1 (MQ=60)
GATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCG > SRR4302547.3354348/1‑94 (MQ=60)
GATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCG > SRR4302547.2947445/1‑94 (MQ=60)
ATGTTCCAGATCTCAATGTAGCGTTCGCCTTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGG < SRR4302547.3561787/94‑1 (MQ=60)
TCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCA < SRR4302547.4805871/94‑1 (MQ=60)
TCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCA < SRR4302547.1874951/94‑1 (MQ=60)
CCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCAC > SRR4302547.296930/1‑94 (MQ=60)
CCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCAC > SRR4302547.243608/1‑94 (MQ=60)
CCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCAC > SRR4302547.6135584/1‑94 (MQ=60)
CCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCA‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCAC > SRR4302547.6690327/1‑94 (MQ=60)
CAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACG > SRR4302547.3900005/1‑94 (MQ=60)
AGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCTC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGG > SRR4302547.5455682/1‑94 (MQ=60)
AGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTTATCGTAGAAAATTTCGGTGCACGG > SRR4302547.2893962/1‑94 (MQ=60)
AGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGG > SRR4302547.201796/1‑94 (MQ=60)
AGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGG > SRR4302547.2353023/1‑94 (MQ=60)
AGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGG > SRR4302547.6673986/1‑94 (MQ=60)
GATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGG > SRR4302547.4069150/1‑94 (MQ=60)
GATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGG < SRR4302547.4279759/94‑1 (MQ=60)
ATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGC > SRR4302547.1647060/1‑94 (MQ=60)
ATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGC < SRR4302547.5894999/94‑1 (MQ=60)
ATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGC < SRR4302547.4074855/94‑1 (MQ=60)
TCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCC < SRR4302547.100207/94‑1 (MQ=60)
CTCAATGTAGCGGTCGCCGTTTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCG > SRR4302547.6624601/1‑94 (MQ=60)
CTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCG > SRR4302547.1658338/1‑94 (MQ=60)
CTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCG > SRR4302547.1101527/1‑94 (MQ=60)
CAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCA > SRR4302547.4469867/1‑94 (MQ=60)
CAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCA > SRR4302547.4730311/1‑94 (MQ=60)
AATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCAC < SRR4302547.2371156/94‑1 (MQ=60)
ATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGCTTTCGGTGCACGGGCCGCACG > SRR4302547.6526842/1‑94 (MQ=60)
ATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACG < SRR4302547.1776600/94‑1 (MQ=60)
TGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGG < SRR4302547.2233645/94‑1 (MQ=60)
TGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGG > SRR4302547.5697608/1‑94 (MQ=60)
TGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGG > SRR4302547.5742835/1‑94 (MQ=60)
GCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCA < SRR4302547.2282897/94‑1 (MQ=60)
CGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAG > SRR4302547.3836110/1‑94 (MQ=60)
GGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGT > SRR4302547.5779185/1‑94 (MQ=60)
GGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGT > SRR4302547.5829066/1‑94 (MQ=60)
GTCGCCTGCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTG < SRR4302547.2848408/94‑1 (MQ=60)
CGCCGTCTTCTTCCGTGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTC > SRR4302547.4540933/1‑94 (MQ=60)
CGCCGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTC > SRR4302547.1647589/1‑94 (MQ=60)
GCCGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCA > SRR4302547.6563058/1‑94 (MQ=60)
GCCGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCA > SRR4302547.1586076/1‑94 (MQ=60)
GCCGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCA > SRR4302547.4485695/1‑94 (MQ=60)
GCCGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCA > SRR4302547.5115627/1‑94 (MQ=60)
CCGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCAC < SRR4302547.4994028/94‑1 (MQ=60)
CGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACC > SRR4302547.5947214/1‑94 (MQ=60)
CGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACC > SRR4302547.3156154/1‑94 (MQ=60)
CGTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGGAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACC > SRR4302547.3042486/1‑94 (MQ=60)
GTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCC > SRR4302547.2458423/1‑94 (MQ=60)
GTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCC > SRR4302547.5081092/1‑94 (MQ=60)
GTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCC > SRR4302547.6318262/1‑94 (MQ=60)
GTCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCC > SRR4302547.2335776/1‑94 (MQ=60)
TCTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCA < SRR4302547.1608395/94‑1 (MQ=60)
CTTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCAT < SRR4302547.4978323/94‑1 (MQ=60)
TTCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATC > SRR4302547.5914386/1‑94 (MQ=60)
TCTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCT < SRR4302547.3767280/94‑1 (MQ=60)
CTTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTG < SRR4302547.3310263/94‑1 (MQ=60)
TTCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTGC > SRR4302547.1824914/1‑94 (MQ=60)
TCCGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTGCC > SRR4302547.392712/1‑94 (MQ=60)
CGGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTGCCAG < SRR4302547.2115107/94‑1 (MQ=60)
GGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTGCCAGA > SRR4302547.2366745/1‑94 (MQ=60)
GGGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTGCCAGA > SRR4302547.6563379/1‑94 (MQ=60)
GGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTGCCAGAA < SRR4302547.5569022/94‑1 (MQ=60)
GGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTGCCAGAA > SRR4302547.3862712/1‑94 (MQ=60)
GGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTGCCAGAA < SRR4302547.1212780/94‑1 (MQ=60)
GGCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTGCCAGAA < SRR4302547.1921707/94‑1 (MQ=60)
GGCTCCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTGCCAGAA < SRR4302547.5699099/94‑1 (MQ=60)
GCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTGCCAGAAG > SRR4302547.5369403/1‑94 (MQ=60)
GCTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTGCCAGAAG < SRR4302547.6705203/94‑1 (MQ=60)
CTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTGCCAGAAGT > SRR4302547.5267551/1‑94 (MQ=60)
CTTCCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTGCCAGAAGT < SRR4302547.2146369/94‑1 (MQ=60)
TTCCCGGAGCCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCTCCCATCTGCCAGAAGTT < SRR4302547.2842150/94‑1 (MQ=60)
CCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTGCCAGAAGTTGT > SRR4302547.3733907/1‑94 (MQ=60)
CCCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTGCCAGAAGTTGT > SRR4302547.3353783/1‑94 (MQ=60)
CCGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTGCCAGAAGTTGTC < SRR4302547.5777235/94‑1 (MQ=60)
CGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTGCCAGAAGTTGTCA > SRR4302547.904281/1‑94 (MQ=60)
CGGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTGCCAGAAGTTGTCA > SRR4302547.1826964/1‑94 (MQ=60)
GGAGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTGCCAGAAGTTGTCAG < SRR4302547.1045035/94‑1 (MQ=60)
AGGCCC‑CCCTCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTGCCAGAAGTTGTCAGAT > SRR4302547.6606020/1‑94 (MQ=60)
AGGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTGCCAGAAGTTGTCAGAT > SRR4302547.1581559/1‑94 (MQ=60)
GGCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTGCCAGAAGTTGTCAGATG < SRR4302547.6109877/94‑1 (MQ=60)
GCCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTGCCAGAAGTTGTCAGATGC < SRR4302547.4554148/94‑1 (MQ=60)
GCCACCCCCAAAGGTGGTCCGCGTCATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTGCTAGAAGTTGTCAGATGC < SRR4302547.5125854/94‑1 (MQ=60)
CCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTGCCAGAAGTTGTCAGATGCG > SRR4302547.1935655/1‑94 (MQ=60)
CCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTGCCAGAAGTTGTCAGATGCG < SRR4302547.4422476/94‑1 (MQ=60)
CCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTGCCAGAAGTTGTCAGATGCG > SRR4302547.3772630/1‑94 (MQ=60)
CCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTGCCAGAAGTTGTCAGATGCG > SRR4302547.4828022/1‑94 (MQ=60)
CCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTGCCAGAAGTTGTCAGATGCG < SRR4302547.761166/94‑1 (MQ=60)
CCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTGCCAGAAGGTGTCAGATGCG > SRR4302547.3620027/1‑94 (MQ=60)
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ATCGTGCCATCGGCCTGGCGGTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGGCC‑CCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTGCCAGAAGTTGTCAGATGCG > NC_000913/2819354‑2819539
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
