Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
521 |
238.2 |
12299412 |
96.0% |
11807435 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,819,446 |
G→C |
G196G (GGC→GGG) |
alaS ← |
alanyl‑tRNA synthetase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,819,446 | 0 | G | C | 98.0%
| 690.1
/ 1.2
| 204 | G196G (GGC→GGG) | alaS | alanyl‑tRNA synthetase |
| Reads supporting (aligned to +/- strand): ref base G (2/2); new base C (112/87); total (115/89) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.87e-01 |
Only 100 of 218 total aligned reads displayed.
CGTGCCATCGGCCTGGCGGTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGGCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTGCCAGAAGTTGTCAGA > NC_000913/2819356‑2819535
|
gCCATCGGCCTGGCGGTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGcccccc < 1:1035976/93‑1 (MQ=255)
gCCATCGGCCTGGCGGTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGcccccc < 1:1544929/93‑1 (MQ=255)
ccATCGGCCTGGCGGTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCcccccc > 2:3559274/1‑93 (MQ=255)
ccATCGGCCTGGCGGTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCcccccc > 1:1867091/1‑93 (MQ=255)
aTCGGCCTGGCGGTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCa > 1:3837972/1‑93 (MQ=255)
tCGGCCTGGCGGTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCaa > 2:5042519/1‑93 (MQ=255)
tCGGCCTGGCGGTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCaa > 2:3552641/1‑93 (MQ=255)
cGGCCTGGCGGTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCaaa < 1:195495/93‑1 (MQ=255)
cGGCCTGGCGGTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGATCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCaaa > 1:4277606/1‑93 (MQ=255)
cTGGCGGTTGAACTGCATGAAGCCGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCCACTTCCGGGCTTCCCGGAGGCCCCCCCCAAAtgtg < 1:2266609/93‑1 (MQ=255)
cTGGCGGTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAAtgtg > 2:3797190/1‑93 (MQ=255)
cTGGCGGTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAAtgtg > 1:941509/1‑93 (MQ=255)
tGGCGGTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTgg > 2:1602989/1‑93 (MQ=255)
tGGCGGTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTgg < 1:84513/93‑1 (MQ=255)
tGGCGGTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTgg > 2:493231/1‑93 (MQ=255)
gCGGTTGAACTGCATGAAGCCGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTc < 1:5641324/93‑1 (MQ=255)
gCGGTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGGCCCCCCCAAATGTGGTc > 1:6032623/1‑93 (MQ=255)
gCGGTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTc < 2:2050684/93‑1 (MQ=255)
ggTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGGCCCCCCCAAATGTGGTCGc > 1:2821012/1‑93 (MQ=255)
ggTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGc > 2:1729386/1‑93 (MQ=255)
gTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGcc < 2:6113158/93‑1 (MQ=255)
ttGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCg > 1:841043/1‑93 (MQ=255)
ttGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCg > 2:2162560/1‑93 (MQ=255)
tGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGt < 2:4793077/93‑1 (MQ=255)
aaCTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGa > 1:134752/1‑93 (MQ=255)
aaCTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGa < 1:2746071/93‑1 (MQ=255)
aaCTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGa < 2:5083934/93‑1 (MQ=255)
aCTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGAt > 2:5874957/1‑93 (MQ=255)
aCTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGAt > 2:3839877/1‑93 (MQ=255)
cTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATc > 1:680094/1‑93 (MQ=255)
tGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCg > 1:3133965/1‑93 (MQ=255)
tGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCg > 1:3293681/1‑93 (MQ=255)
aTGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTag > 1:594785/1‑93 (MQ=255)
tGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTaga > 1:21517/1‑93 (MQ=255)
tGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGACCCCCCCAAATGGGGTCGCCGTGATCGTaga > 1:3378732/1‑93 (MQ=255)
gAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTagaa > 1:2541860/1‑93 (MQ=255)
aGACGATGTTCCAGATCTCAGTGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTagaaga < 2:2874411/93‑1 (MQ=255)
aGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCCAATGTGGTCGCCGTGATCGTagaagt > 1:5403811/1‑92 (MQ=255)
aGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTagaaga < 1:1337391/93‑1 (MQ=255)
gACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGAt > 1:5728295/1‑93 (MQ=255)
gACAATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGAt < 1:35469/93‑1 (MQ=255)
aCGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGAtt < 2:1949503/93‑1 (MQ=255)
aCGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGAtt > 1:3267397/1‑93 (MQ=255)
aCGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGAtt < 1:6106118/93‑1 (MQ=255)
gATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTc > 2:4460751/1‑93 (MQ=255)
gATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTc < 1:1143738/93‑1 (MQ=255)
gATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTc < 1:3448795/93‑1 (MQ=255)
gATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTc > 1:3978044/1‑93 (MQ=255)
gTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGt < 2:648525/93‑1 (MQ=255)
ttCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTg > 2:4251515/1‑93 (MQ=255)
tCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGc < 2:5625939/93‑1 (MQ=255)
ccAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCa < 2:5820554/93‑1 (MQ=255)
cAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGCCCCCCCCCAAATGTGGTAGCCGTGATCGTAGAAGATTTCGGTGCAc > 2:2971938/1‑93 (MQ=255)
gATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACgg > 2:3094773/1‑93 (MQ=255)
aTCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACggg > 1:2648223/1‑93 (MQ=255)
aTCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACggg < 2:5910584/93‑1 (MQ=255)
aTCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACggg > 2:5619621/1‑93 (MQ=255)
aTCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACggg > 1:3083768/1‑93 (MQ=255)
tctcAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGc < 2:1826133/93‑1 (MQ=255)
tctcAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGc < 2:2723714/93‑1 (MQ=255)
tctcAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGc > 2:5057745/1‑93 (MQ=255)
tcAGTGTAGCGGTCGCCTTCGTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCg < 2:5698054/93‑1 (MQ=255)
tcAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCg > 1:5323887/1‑93 (MQ=255)
aaTGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCa < 1:5252518/93‑1 (MQ=255)
aaTGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGAGTTCGGTGCACGGGCCGCa > 1:9991/1‑93 (MQ=255)
aTGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCAc > 1:4548224/1‑93 (MQ=255)
tGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCCAAAGTGGTTGCCGGGGTCCGAGAAGATTTTGGTGCCACGGCCGCACg > 1:3726710/1‑93 (MQ=255)
tAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGa < 2:5121793/93‑1 (MQ=255)
aGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGAc > 1:4766335/1‑93 (MQ=255)
gCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGAcc < 2:458660/93‑1 (MQ=255)
gCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGAcc < 2:4985438/93‑1 (MQ=255)
cGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCa < 2:1185314/93‑1 (MQ=255)
cGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCa > 1:4612417/1‑93 (MQ=255)
gTCGCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAgt < 2:4371308/93‑1 (MQ=255)
gCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCTCGGACCAGTGTc < 2:5544237/93‑1 (MQ=255)
gCCGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTc > 2:4525070/1‑93 (MQ=255)
cGTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCAc < 2:2888675/93‑1 (MQ=255)
gTCTTCTTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCAcc > 1:5073455/1‑93 (MQ=255)
tcttctTCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCAccc > 2:2641994/1‑93 (MQ=255)
cttcttCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCAGGGGCCGCACGGACCAGTGGCACCCa > 1:1494057/1‑93 (MQ=255)
cttcttCCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCa > 2:5523857/1‑93 (MQ=255)
tcttcCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCTGTGCACCGGCCGCCCGGACCAGTGTCCCCCacc > 1:4943927/1‑91 (MQ=255)
tcttcCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGTCCGCACGGACCAGTGTCACCCATc < 1:3907185/93‑1 (MQ=255)
tcttcCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATc < 2:4862840/93‑1 (MQ=255)
tcttcCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATc < 2:5361555/93‑1 (MQ=255)
ttcCGGGCTTCCCGGAGGGCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTg < 1:2212793/93‑1 (MQ=255)
ttcCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTg > 2:3519256/1‑93 (MQ=255)
ttcCGGGCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTg > 1:5212170/1‑93 (MQ=255)
gggCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTGCCAg < 1:2793056/93‑1 (MQ=255)
ggCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTGCCAGa > 2:5187878/1‑93 (MQ=255)
ggCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTGCCAGa < 1:201266/93‑1 (MQ=255)
gCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCCCCCATCTGCCAGaa < 2:709375/93‑1 (MQ=255)
gCTTCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTGCCAGaa < 1:5662481/93‑1 (MQ=255)
ttCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTGCCAGAAGt < 1:3593226/93‑1 (MQ=255)
ttCCCGGAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTGCCAGAAGt > 2:3397159/1‑93 (MQ=255)
cccGGGGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTGCCAGAAGTTg < 1:4768209/93‑1 (MQ=255)
ggAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTCCCAGAAGTTGTCa > 2:1486632/1‑93 (MQ=255)
gAGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTGCCAGAAGTTGTCAg > 2:3025530/1‑93 (MQ=255)
agcgCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTGCCAGAAGTTGTCAGa < 2:605734/90‑1 (MQ=255)
aGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTGCCAGAAGTTGTCAGa < 1:5503947/93‑1 (MQ=255)
|
CGTGCCATCGGCCTGGCGGTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGGCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTGCCAGAAGTTGTCAGA > NC_000913/2819356‑2819535
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CATCGTGCCATCGGCCTGGCGGTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGG‑CCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTGCCAGAAGTTGTCAGATGCG > NC_000913/2819353‑2819539
|
CATCGTGCCATCGGCCTGGCGGTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGC > SRR4302532.5952777/1‑94 (MQ=60)
GTGCCATCGGCCTGGCGATTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGTTCGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCC > SRR4302532.6214890/1‑94 (MQ=60)
GCCATCGGCCTGGCGGTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCC < SRR4302532.1070940/94‑1 (MQ=60)
GCCATCGGCCTGGCGGTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCC < SRR4302532.1597137/94‑1 (MQ=60)
GCCATCGGCCTGGCGGTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCC > SRR4302532.1928945/1‑94 (MQ=60)
CCATCGGCCTGGCGGTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCC < SRR4302532.2871711/94‑1 (MQ=60)
CATCGGCCTGGCGGTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCA > SRR4302532.3967543/1‑94 (MQ=60)
TCGGCCTGGCGGTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGATCGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAA > SRR4302532.4421644/1‑94 (MQ=60)
CGGCCTGGCGGTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAAT < SRR4302532.202120/94‑1 (MQ=60)
CCTGGCGGTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTG > SRR4302532.973770/1‑94 (MQ=60)
CCTGGCGGTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTG > SRR4302532.2021051/1‑94 (MQ=60)
CTGGCGGTTGAACTGCATGAAGCCGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCCACTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGG < SRR4302532.2341833/94‑1 (MQ=60)
CTGGCGGTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGGTTCCCGGACGC‑CCCCCCCAAATGTGG > SRR4302532.5522025/1‑94 (MQ=60)
CTGGCGGTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGG > SRR4302532.918397/1‑94 (MQ=60)
CTGGCGGTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGG > SRR4302532.671435/1‑94 (MQ=60)
TGGCGGTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGT > SRR4302532.1021242/1‑94 (MQ=60)
TGGCGGTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGT < SRR4302532.87505/94‑1 (MQ=60)
TGGCGGTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGT < SRR4302532.87506/94‑1 (MQ=60)
GGCGGTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGG‑CCCCCCCAAATGTGGTC > SRR4302532.6240983/1‑94 (MQ=60)
GCGGTTGAACTGCATGAAGCCGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCG < SRR4302532.5837411/94‑1 (MQ=60)
GCGGTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCG < SRR4302532.2234785/94‑1 (MQ=60)
CGGTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGG‑CCCCCCCAAATGTGGTCGC > SRR4302532.2915418/1‑94 (MQ=60)
CGGTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCGC > SRR4302532.5648519/1‑94 (MQ=60)
GGTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCGCC > SRR4302532.6078902/1‑94 (MQ=60)
GTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCGCCG > SRR4302532.869903/1‑94 (MQ=60)
TGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCGCCGTG > SRR4302532.338763/1‑94 (MQ=60)
TGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCGCCGTG < SRR4302532.3042036/94‑1 (MQ=60)
GAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCGCCGTGA > SRR4302532.139295/1‑94 (MQ=60)
AACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCGCCGTGAT < SRR4302532.2838305/94‑1 (MQ=60)
ACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCGCCGTGATC > SRR4302532.703482/1‑94 (MQ=60)
CTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCGCCGTGATCG < SRR4302532.938350/94‑1 (MQ=60)
CTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCGCCGTGATCG > SRR4302532.3237990/1‑94 (MQ=60)
CTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCGCCGTGATCG < SRR4302532.152594/94‑1 (MQ=60)
CTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCGCCGTGATCG > SRR4302532.3403281/1‑94 (MQ=60)
CTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCGCCGTGATCG > SRR4302532.3501008/1‑94 (MQ=60)
TGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCGCCGTGATCGT < SRR4302532.1392076/94‑1 (MQ=60)
GCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCGCCGTGATCGTA < SRR4302532.2773587/94‑1 (MQ=60)
CATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCGCCGTGATCGTAT > SRR4302532.3205410/1‑94 (MQ=60)
CATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCGCCGTGATCGTAG > SRR4302532.615552/1‑94 (MQ=60)
ATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCGCCGTGATCGTAGA > SRR4302532.22383/1‑94 (MQ=60)
ATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCGCCGTGATCGTAGA < SRR4302532.2370941/94‑1 (MQ=60)
ATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGA‑CCCCCCCAAATGGGGTCGCCGTGATCGTAGA > SRR4302532.3491722/1‑94 (MQ=60)
TGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCGCCGTGATCGTAGAA > SRR4302532.1984599/1‑94 (MQ=60)
TGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCGCCGTGATCGTAGAA < SRR4302532.1683061/94‑1 (MQ=60)
TGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCGCCGTGATCGTAGAA > SRR4302532.2626636/1‑94 (MQ=60)
GAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCGCCGTGATCGTAGAAG < SRR4302532.4104481/94‑1 (MQ=60)
AAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCCAATGTGGTCGCCGTGATCGTAGAAGT > SRR4302532.5591034/1‑94 (MQ=60)
AGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGAT > SRR4302532.556023/1‑94 (MQ=60)
AGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGAT > SRR4302532.5927798/1‑94 (MQ=60)
AGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGAT < SRR4302532.1382119/94‑1 (MQ=60)
GACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATT > SRR4302532.624217/1‑94 (MQ=60)
GACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATT > SRR4302532.3376062/1‑94 (MQ=60)
GACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATT > SRR4302532.720454/1‑94 (MQ=60)
GACAATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATT < SRR4302532.36772/94‑1 (MQ=60)
ACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTT < SRR4302532.6316852/94‑1 (MQ=60)
ACGATGTTCCAGATCGCAATGCAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCGCCGTGCTCGTAGAAGATTT < SRR4302532.51609/94‑1 (MQ=60)
ACGATGTACCAGTTCTCAATGTAGCGGTCGCCGTCTTGTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTT < SRR4302532.183057/94‑1 (MQ=60)
CGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTG > SRR4302532.5453403/1‑94 (MQ=60)
CGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTC > SRR4302532.4112052/1‑94 (MQ=60)
CGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTC > SRR4302532.4879089/1‑94 (MQ=60)
GATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCG < SRR4302532.1181900/94‑1 (MQ=60)
GATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCG < SRR4302532.5015441/94‑1 (MQ=60)
GATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCG < SRR4302532.3947517/94‑1 (MQ=60)
GATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCG < SRR4302532.3564314/94‑1 (MQ=60)
ATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGG < SRR4302532.2894919/94‑1 (MQ=60)
TGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGT < SRR4302532.5829657/94‑1 (MQ=60)
TTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGC > SRR4302532.1280300/1‑94 (MQ=60)
CCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCGGCGTGATCGTAGAAGATTTCGGTGCAC > SRR4302532.3784866/1‑94 (MQ=60)
CCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCAC > SRR4302532.2190727/1‑94 (MQ=60)
AGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGG > SRR4302532.3132869/1‑94 (MQ=60)
GATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCGCCGTGATCGTAGACGATTTCGGTGCACTGG > SRR4302532.2369217/1‑94 (MQ=60)
GATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGG > SRR4302532.3185780/1‑94 (MQ=60)
GATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGG < SRR4302532.5268007/94‑1 (MQ=60)
GATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGG > SRR4302532.2737062/1‑94 (MQ=60)
TCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCC > SRR4302532.3693572/1‑94 (MQ=60)
TCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCC < SRR4302532.4434861/94‑1 (MQ=60)
CTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCG > SRR4302532.5508361/1‑94 (MQ=60)
TCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGC > SRR4302532.3266932/1‑94 (MQ=60)
CAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGAGTTCGGTGCACGGGCCGCA > SRR4302532.10417/1‑94 (MQ=60)
AATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCAC > SRR4302532.2688223/1‑94 (MQ=60)
AATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCAC < SRR4302532.5433599/94‑1 (MQ=60)
AATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCAC > SRR4302532.4703450/1‑94 (MQ=60)
AATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCAC > SRR4302532.4248434/1‑94 (MQ=60)
ATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCcaaagtggttgccggggtccgagaagattttggtgccacggccgcacg > SRR4302532.3851885/1‑46 (MQ=60)
GTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGA > SRR4302532.3590863/1‑94 (MQ=60)
TAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGAC > SRR4302532.4929768/1‑94 (MQ=60)
TAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGAC > SRR4302532.4929769/1‑94 (MQ=60)
GCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCA > SRR4302532.4769680/1‑94 (MQ=60)
GGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGT < SRR4302532.4753203/94‑1 (MQ=60)
GTCGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTG < SRR4302532.1088263/94‑1 (MQ=60)
CGCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTC < SRR4302532.3491120/94‑1 (MQ=60)
GCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCA > SRR4302532.3995860/1‑94 (MQ=60)
CCCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCA < SRR4302532.2330681/94‑1 (MQ=60)
CCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCCAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCAC > SRR4302532.2761741/1‑94 (MQ=60)
CCGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCAC < SRR4302532.5856190/94‑1 (MQ=60)
CGTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACC > SRR4302532.5247849/1‑94 (MQ=60)
GTCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCCCACGGACCAGTGTCACCC > SRR4302532.4961553/1‑94 (MQ=60)
TCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCAGGGGCCGCACGGACCAGTGGCACCCA > SRR4302532.1544459/1‑94 (MQ=60)
TCTTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCA > SRR4302532.1544460/1‑94 (MQ=60)
TTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCTGTGCACCGGCCGCCCGGACCAGTGTCCCCCACC > SRR4302532.5113613/1‑94 (MQ=60)
TTCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATC > SRR4302532.4040226/1‑94 (MQ=60)
TCTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGTCCGCACGGACCAGTGTCACCCATCT < SRR4302532.4038937/94‑1 (MQ=60)
CTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCGCCGTGGTCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTG > SRR4302532.174044/1‑94 (MQ=60)
CTTCCGGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTG > SRR4302532.5391913/1‑94 (MQ=60)
TTCCGGGCTTCCCGGAGGG‑CCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTGC < SRR4302532.2286318/94‑1 (MQ=60)
GGGCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTGCCAGA < SRR4302532.2886699/94‑1 (MQ=60)
GGCTTCCCGTATGC‑CCCCCCCAAATGTGATCGCCGTGATCGTAGAAGATTTCGATGTACGGGCCGCACGCACCAGTGTCACCCATCTGCCAGAC > SRR4302532.2442141/1‑94 (MQ=60)
GGCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTGCCAGAA < SRR4302532.208135/94‑1 (MQ=60)
GGCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTGCCAGAA > SRR4302532.5403412/1‑94 (MQ=60)
GCTTCCCGGAGGC‑CCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTGCCAGAAG < SRR4302532.5859810/94‑1 (MQ=60)
CTTCCCGGAGGC‑CCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACGAGTGTCACCCATCTGCCAGAAGT > SRR4302532.3618133/1‑94 (MQ=60)
TTCCCGGAGGC‑CCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTGCCAGAAGTT < SRR4302532.3713401/94‑1 (MQ=60)
CCCGGGGGC‑CCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTGCCAGAAGTTGT < SRR4302532.4931811/94‑1 (MQ=60)
CGGAGTC‑CCCCCCCAAAGGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTGCCAGAAGTTGTCA < SRR4302532.1201507/94‑1 (MQ=60)
AGGC‑CCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTGCCAGAAGTTGTCAGAT < SRR4302532.5921419/94‑1 (MQ=60)
AGGC‑CCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTGCCAGAAGTTGTCAGAT < SRR4302532.5694862/94‑1 (MQ=60)
GGGCCCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTGCCAGAAGTTGTCAGAT < SRR4302532.1407869/94‑1 (MQ=60)
C‑CCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTGCCAGAAGTTGTCAGATGCG < SRR4302532.4096766/94‑1 (MQ=60)
C‑CCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTGCCAGAAGTTGTCAGATGCG < SRR4302532.3913148/94‑1 (MQ=60)
|
CATCGTGCCATCGGCCTGGCGGTTGAACTGCATGAAGACGATGTTCCAGATCTCAATGTAGCGGTCGCCGTCTTCTTCCGGGCTTCCCGGAGGG‑CCCCCCCAAATGTGGTCGCCGTGATCGTAGAAGATTTCGGTGCACGGGCCGCACGGACCAGTGTCACCCATCTGCCAGAAGTTGTCAGATGCG > NC_000913/2819353‑2819539
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
