Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
593 |
264.2 |
13311096 |
97.8% |
13018251 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,885,719 |
T→C |
D206G (GAT→GGT) |
cysH ← |
3'‑phosphoadenosine 5'‑phosphosulfate reductase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,885,719 | 0 | T | C | 88.0%
| 535.3
/ 52.9
| 192 | D206G (GAT→GGT) | cysH | 3'‑phosphoadenosine 5'‑phosphosulfate reductase |
| Reads supporting (aligned to +/- strand): ref base T (11/12); new base C (94/75); total (105/87) |
| Fisher's exact test for biased strand distribution p-value = 5.10e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.78e-01 |
Only 100 of 199 total aligned reads displayed.
TTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATA > NC_000913/2885629‑2885809
|
tttAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCAccc < 1:502054/93‑1 (MQ=255)
ttAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCAcccc < 1:2332093/93‑1 (MQ=255)
tAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATTCTTCACCCCa > 1:5216080/1‑93 (MQ=255)
aaGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCAt < 2:5371787/93‑1 (MQ=255)
aaGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCAt < 2:2421277/93‑1 (MQ=255)
accAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATaa < 1:5448360/92‑1 (MQ=255)
ccAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAAt > 1:5197457/1‑93 (MQ=255)
ccAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAAt > 2:5688973/1‑93 (MQ=255)
cAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATg > 1:6017739/1‑93 (MQ=255)
cAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATg > 2:3735223/1‑93 (MQ=255)
aaaGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATgg < 1:5575146/93‑1 (MQ=255)
aaaGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATgg > 1:5747601/1‑93 (MQ=255)
aaaGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATgg > 2:501750/1‑93 (MQ=255)
aaaGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATgg > 1:1225966/1‑93 (MQ=255)
aaGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATggg > 2:4062549/1‑93 (MQ=255)
gAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTg > 2:662201/1‑93 (MQ=255)
aaaCGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGa < 2:2294961/93‑1 (MQ=255)
aaaCGCGTTTCTTCTTCCACCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGa < 2:270222/93‑1 (MQ=255)
aaCGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGat > 2:6564337/1‑93 (MQ=255)
aaCGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGat > 1:1098766/1‑93 (MQ=255)
aaCGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGat < 1:4121939/93‑1 (MQ=255)
gcgTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATAtt > 1:168918/1‑93 (MQ=255)
tttCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCa > 1:6336238/1‑93 (MQ=255)
tttCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCa > 2:2925161/1‑93 (MQ=255)
tttCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCa < 1:3823359/93‑1 (MQ=255)
tttCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGGGCGATATTTCa > 2:642843/1‑93 (MQ=255)
ttcttcttcCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAg > 1:4027150/1‑93 (MQ=255)
tcttcttcCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAgg > 1:2091822/1‑93 (MQ=255)
cttcttcCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGc < 2:4110704/93‑1 (MQ=255)
cttcttcCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGc < 2:790134/93‑1 (MQ=255)
ttcttcCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGcc > 2:5388623/1‑93 (MQ=255)
cttcCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCAt < 1:5719334/93‑1 (MQ=255)
ttcCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATg < 1:2552193/93‑1 (MQ=255)
ttcCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATg > 2:1734275/1‑93 (MQ=255)
ccGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGtt < 1:1118179/93‑1 (MQ=255)
gCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGtttt < 1:4744679/93‑1 (MQ=255)
gCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGtttt < 1:2368018/93‑1 (MQ=255)
gCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGtttt < 2:6518522/93‑1 (MQ=255)
gCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAg > 2:319875/1‑93 (MQ=255)
ccGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAgg > 2:5905560/1‑93 (MQ=255)
ccGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAgg > 1:6120840/1‑93 (MQ=255)
gggTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTa > 2:3291318/1‑93 (MQ=255)
gggTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTa > 2:1239955/1‑93 (MQ=255)
gggTTCCCAATTACGGGTTGTATGGGTATCGTCCACCGATAAAAATCCGTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTa > 2:6655282/1‑93 (MQ=255)
ggTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTAc < 2:3066488/93‑1 (MQ=255)
ggTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTAc < 1:3137354/93‑1 (MQ=255)
gTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACt < 2:2039904/93‑1 (MQ=255)
tCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGa > 2:6333731/1‑93 (MQ=255)
cccATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGAt > 1:5900720/1‑93 (MQ=255)
cccATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGAt > 2:4197717/1‑93 (MQ=255)
ccATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATTTTTTTGCAGGTACTGATa > 2:5823832/1‑93 (MQ=255)
cATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATaa < 2:3981028/93‑1 (MQ=255)
aTTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATaaa < 2:6299617/93‑1 (MQ=255)
ttACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATa < 2:1935561/93‑1 (MQ=255)
ttACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATa < 2:3583391/93‑1 (MQ=255)
ttACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATa < 2:3761082/93‑1 (MQ=255)
tACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAg < 1:3055469/93‑1 (MQ=255)
ccGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGt < 1:1361036/92‑1 (MQ=255)
cGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGtt < 2:4818420/93‑1 (MQ=255)
cGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGtt < 1:3357774/93‑1 (MQ=255)
ggTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCg > 1:785283/1‑93 (MQ=255)
gTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCgg < 1:5263235/93‑1 (MQ=255)
gTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCgg < 1:2249935/93‑1 (MQ=255)
tGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGtt > 1:6442934/1‑93 (MQ=255)
gTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTa < 1:4326475/93‑1 (MQ=255)
gTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTa > 2:4894063/1‑93 (MQ=255)
gggTATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATccc > 2:2584449/1‑93 (MQ=255)
ggTATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCa < 1:436053/93‑1 (MQ=255)
gTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAg < 2:4912746/93‑1 (MQ=255)
tATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGt < 1:1574898/93‑1 (MQ=255)
tATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGt < 1:885127/93‑1 (MQ=255)
tATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGt > 2:2645324/1‑93 (MQ=255)
aTCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTc < 2:6011309/93‑1 (MQ=255)
aTCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTc > 2:1112313/1‑93 (MQ=255)
cccACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATa > 2:4632620/1‑93 (MQ=255)
cccACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATa > 2:2276543/1‑93 (MQ=255)
cccACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATa < 1:6530379/93‑1 (MQ=255)
ccACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATaa > 1:1874261/1‑93 (MQ=255)
cACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAAt > 2:5581823/1‑93 (MQ=255)
cACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAAt > 1:3648383/1‑93 (MQ=255)
cACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAAt < 1:2502171/93‑1 (MQ=255)
cACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAAt > 2:3401759/1‑93 (MQ=255)
cACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTAGGTTATCCCAGTCGATAAt > 2:5654469/1‑93 (MQ=255)
aCCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATc < 1:3945525/93‑1 (MQ=255)
cGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCgg > 1:5787663/1‑93 (MQ=255)
cGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAACAGTTCGGTTATCCCAGTCGATAATCgg < 2:1044550/93‑1 (MQ=255)
gATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGgc > 2:1394458/1‑93 (MQ=255)
aTAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGgca > 2:3907977/1‑93 (MQ=255)
aTAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGgca > 2:2699080/1‑93 (MQ=255)
tAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGgcag > 1:3489236/1‑93 (MQ=255)
aaaTATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGgcagc < 1:3691891/93‑1 (MQ=255)
aaTATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGgcagca > 2:922388/1‑93 (MQ=255)
atatCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCAc < 2:3676293/93‑1 (MQ=255)
acatCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCAc < 1:6379438/91‑1 (MQ=255)
tatCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACt > 1:3066272/1‑93 (MQ=255)
tatCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACt < 2:438562/93‑1 (MQ=255)
atCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACtt < 1:4497076/93‑1 (MQ=255)
tCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACttt > 2:131708/1‑93 (MQ=255)
ttCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTaaa > 1:5885176/1‑93 (MQ=255)
tCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAAt > 1:427276/1‑93 (MQ=255)
|
TTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATA > NC_000913/2885629‑2885809
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACG > NC_000913/2885626‑2885811
|
CTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCAC > SRR4302547.1163070/1‑94 (MQ=60)
CTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCAC > SRR4302547.6617419/1‑94 (MQ=60)
CTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCAC > SRR4302547.6660875/1‑94 (MQ=60)
TTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACC > SRR4302547.2470518/1‑94 (MQ=60)
TTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCC < SRR4302547.511193/94‑1 (MQ=60)
TTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATTCTTCACCCCA > SRR4302547.5323443/1‑94 (MQ=60)
TTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCA < SRR4302547.2379359/94‑1 (MQ=60)
GCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAAT > SRR4302547.5304417/1‑94 (MQ=60)
ACCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAAT < SRR4302547.5560941/94‑1 (MQ=60)
CCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATG > SRR4302547.6142634/1‑94 (MQ=60)
CAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGG > SRR4302547.6229841/1‑94 (MQ=60)
CAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGG > SRR4302547.5866399/1‑94 (MQ=60)
CAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGG > SRR4302547.2595848/1‑94 (MQ=60)
CAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGG > SRR4302547.5245822/1‑94 (MQ=60)
CAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGG > SRR4302547.2406684/1‑94 (MQ=60)
CAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGG > SRR4302547.1250700/1‑94 (MQ=60)
AAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGGG < SRR4302547.5690101/94‑1 (MQ=60)
GAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGA > SRR4302547.67778/1‑94 (MQ=60)
AAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGAT > SRR4302547.1120832/1‑94 (MQ=60)
AACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATA > SRR4302547.4585496/1‑94 (MQ=60)
AACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATA < SRR4302547.4205702/94‑1 (MQ=60)
CGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTTATATT > SRR4302547.1503127/1‑94 (MQ=60)
CGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATATT > SRR4302547.4446486/1‑94 (MQ=60)
CGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATATT > SRR4302547.172011/1‑94 (MQ=60)
GCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTT > SRR4302547.4188364/1‑94 (MQ=60)
GTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCA > SRR4302547.6468170/1‑94 (MQ=60)
GTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCA < SRR4302547.2359391/94‑1 (MQ=60)
GTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCA > SRR4302547.3272058/1‑94 (MQ=60)
TTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAG < SRR4302547.1704432/94‑1 (MQ=60)
TTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAG > SRR4302547.4108966/1‑94 (MQ=60)
TTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAG < SRR4302547.3901259/94‑1 (MQ=60)
TTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGG > SRR4302547.2133514/1‑94 (MQ=60)
TTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGG > SRR4302547.5525584/1‑94 (MQ=60)
TCTTCCGCCATGCCGGGTTCCTATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCAT > SRR4302547.6534289/1‑94 (MQ=60)
CTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATG < SRR4302547.5837474/94‑1 (MQ=60)
TTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGT < SRR4302547.2603735/94‑1 (MQ=60)
CCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTT < SRR4302547.1140709/94‑1 (MQ=60)
CGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTT < SRR4302547.3198273/94‑1 (MQ=60)
CGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTT > SRR4302547.3777315/1‑94 (MQ=60)
GCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTT < SRR4302547.4842999/94‑1 (MQ=60)
GCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTT < SRR4302547.2416018/94‑1 (MQ=60)
CTTGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATAGCCTTCCCCCCATAATGGGTGATATTTCAGGCCATGTTTTTGC < SRR4302547.391174/94‑1 (MQ=60)
CATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGC < SRR4302547.1366513/94‑1 (MQ=60)
GCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGG > SRR4302547.6247818/1‑94 (MQ=60)
GGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACT < SRR4302547.3199666/94‑1 (MQ=60)
GTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTG > SRR4302547.5876308/1‑94 (MQ=60)
TCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGAT > SRR4302547.584014/1‑94 (MQ=60)
TCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGAT > SRR4302547.6022914/1‑94 (MQ=60)
CCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAA > SRR4302547.5757390/1‑94 (MQ=60)
TACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGT < SRR4302547.3116272/94‑1 (MQ=60)
CCGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTT < SRR4302547.1388350/94‑1 (MQ=60)
ACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTT < SRR4302547.3716770/94‑1 (MQ=60)
ACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTT < SRR4302547.2450600/94‑1 (MQ=60)
CGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTC < SRR4302547.3425890/94‑1 (MQ=60)
CGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTC < SRR4302547.5308908/94‑1 (MQ=60)
GGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCG > SRR4302547.800137/1‑94 (MQ=60)
GTTGTATGGTTATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGT < SRR4302547.173724/94‑1 (MQ=60)
GTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGT < SRR4302547.5371619/94‑1 (MQ=60)
GTTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGT < SRR4302547.2295359/94‑1 (MQ=60)
TTGTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTT > SRR4302547.6577199/1‑94 (MQ=60)
GTATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTAT < SRR4302547.4415524/94‑1 (MQ=60)
ATGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCC > SRR4302547.4361996/1‑94 (MQ=60)
TGGGTATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCC > SRR4302547.5593153/1‑94 (MQ=60)
TGGGTATCGCCCAACGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTAGGATATCCC > SRR4302547.4043782/1‑94 (MQ=60)
GGTATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAG < SRR4302547.444147/94‑1 (MQ=60)
TATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTC < SRR4302547.6003960/94‑1 (MQ=60)
TATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTC < SRR4302547.1606240/94‑1 (MQ=60)
TATCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTC < SRR4302547.902132/94‑1 (MQ=60)
ttcgcctatCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGATACTGATAAATAGTTCGGTTATCCCAGTCG < SRR4302547.3455560/85‑1 (MQ=60)
TCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATTTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGA < SRR4302547.611284/94‑1 (MQ=60)
TCGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGA > SRR4302547.5354168/1‑94 (MQ=60)
CGCCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGAT > SRR4302547.2823279/1‑94 (MQ=60)
CCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAA > SRR4302547.1178626/1‑94 (MQ=60)
CCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAA < SRR4302547.6666297/94‑1 (MQ=60)
CCCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAA > SRR4302547.1911289/1‑94 (MQ=60)
CCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAAT > SRR4302547.3120536/1‑94 (MQ=60)
CCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAAT > SRR4302547.3722801/1‑94 (MQ=60)
CCACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAAT < SRR4302547.4913035/94‑1 (MQ=60)
CACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATC < SRR4302547.2552727/94‑1 (MQ=60)
ACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCG > SRR4302547.2179764/1‑94 (MQ=60)
ACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCG < SRR4302547.4025769/94‑1 (MQ=60)
ACCGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCG < SRR4302547.3737480/94‑1 (MQ=60)
CCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGG > SRR4302547.5907378/1‑94 (MQ=60)
CGATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGC > SRR4302547.6256921/1‑94 (MQ=60)
GATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCA < SRR4302547.995967/94‑1 (MQ=60)
GATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCA < SRR4302547.663986/94‑1 (MQ=60)
ATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAG > SRR4302547.3560435/1‑94 (MQ=60)
ATAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAG < SRR4302547.88305/94‑1 (MQ=60)
TAAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGC > SRR4302547.6504746/1‑94 (MQ=60)
AAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCA < SRR4302547.3909330/94‑1 (MQ=60)
AAATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCA < SRR4302547.3767262/94‑1 (MQ=60)
ATATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACT > SRR4302547.3127225/1‑94 (MQ=60)
ACATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACT < SRR4302547.6512569/94‑1 (MQ=60)
ATCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTT < SRR4302547.4589962/94‑1 (MQ=60)
TCCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTA > SRR4302547.4359004/1‑94 (MQ=60)
CCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAA > SRR4302547.1970986/1‑94 (MQ=60)
CCTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAA > SRR4302547.6018927/1‑94 (MQ=60)
CTTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAA > SRR4302547.6007016/1‑94 (MQ=60)
TTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAAT > SRR4302547.435188/1‑94 (MQ=60)
TTCACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAAT > SRR4302547.4743266/1‑94 (MQ=60)
ACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACG > SRR4302547.4121182/1‑94 (MQ=60)
ACCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGCTATCCCAGTCGATAATCGGCAGCACTTTAAATACG > SRR4302547.1709791/1‑94 (MQ=60)
|
CTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACG > NC_000913/2885626‑2885811
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
