Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
593 |
264.2 |
13311096 |
97.8% |
13018251 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,030,523 |
A→G |
R402R (CGA→CGG) |
ygfU → |
putative permease |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,030,523 | 0 | A | G | 82.3%
| 475.9
/ 99.9
| 203 | R402R (CGA→CGG) | ygfU | putative permease |
| Reads supporting (aligned to +/- strand): ref base A (14/22); new base G (79/88); total (93/110) |
| Fisher's exact test for biased strand distribution p-value = 4.61e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.19e-01 |
Only 100 of 209 total aligned reads displayed.
AAATGGCGGTGCTGGTAGCCTCCATTCCGCAATTTGTGCTGGGCGGCGCTGGTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGAATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTTGGCATGACTCCGACGCTCTCTC > NC_000913/3030432‑3030614
|
aaaTGGCGGTGCTGGTAGGCTCCATTCCGCAATTTGTGCTGGGCGGCGCTGGTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGaa > 1:6413424/1‑93 (MQ=255)
aaTGGCGGTGCTGGTAGCCTCCATTCCGCAATTTGTGCTGGGCGGCGCTGGTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGGAt < 2:3186271/93‑1 (MQ=255)
aaTGGCGGTGCTGGTAGCCTCCATTCCGCAATTTGTGCTGGGCGGCGCTGGTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGGAt > 2:4406721/1‑93 (MQ=255)
aTGGCGGTGCTGGTAGCCTCCATTCCGCAATTTGTGCTGGGCGGCGCTGGTCTAGTGATGTTCGGCATGGTACTTGCGACAGGGATTCGGAtt > 2:3787739/1‑93 (MQ=255)
aTGGCGGTGCTGGTAGCCTCCATTCCGCAATTTGTGCTGGGCGGCGCTGGTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGGAtt < 2:3896465/93‑1 (MQ=255)
tGGCGGTGCTGGTAGCCTCCATTCCGCAATTTGTGCTGGGCGGCGCTGGTCTAGTGATGTTCGGCATGGTACTGGCGACAGggattcggattc < 2:2950170/93‑1 (MQ=255)
gTGCTGGTAGCCTCCATTCCGCAATTTGTGCTGGGCGGCGCTGGTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTcg > 1:936611/1‑93 (MQ=255)
gTGCTGGTAGCCTCCATTCCGCAATTTGTGCTGGGCGGCGCTGGTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTcg < 1:2936400/93‑1 (MQ=255)
ggTAGCCTCCATTCCGCAATTTGTGCTGGGCGGCGCTGGTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTg < 1:5693656/93‑1 (MQ=255)
ggTAGCCTCCATTCCGCAATTTGTGCTGGGCGGCGCTGGTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTg < 1:4950496/93‑1 (MQ=255)
ggTAGCCTCCATTCCGCAATTTGTGCTGGGCGGCGCTGGTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTg < 1:5209243/93‑1 (MQ=255)
ggTAGCCTCCATTCCGCAATTTGTGCTGGGCGGCGCTGGTCTAGTGATGTTCGGCATGGTACTGGAGACAGGGATTCGGATTCTGTCGCGCTg > 2:6635742/1‑93 (MQ=255)
tAGCCTCCATTCCGCAATTTGTGCTGGGCGGCGCTGGTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTa < 1:6249185/93‑1 (MQ=255)
tAGCCTCCATTCCGCAATTTGTGCTGGGCGGCGCTGGTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGAATTCTGTCGCGCTGTa < 2:4533907/93‑1 (MQ=255)
aGCCTCCATTCCGCAATTTGTGCTGGGCGGCGCTGGTCTAGTGATGTTCGGCATGGTACTGGAGACAGGGATTCGGATTCTGTCGCGCTGTaa > 2:5346263/1‑93 (MQ=255)
gCCTCCATTCCGCAATTTGTGCTGGGCGGCGCTGGTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGAATTCTGTCGCGCTGTAAc < 1:12076/93‑1 (MQ=255)
tCCATTCCGCAATTTGTGCTGGGCGGCGCTGGTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTac > 1:2026928/1‑93 (MQ=255)
tCCATTCCGCAATTTGTGCTGGGCGGCGCTGGTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTac < 2:1625515/93‑1 (MQ=255)
cATTCCGCAATTTGTGCTGGGCGGCGCTGGTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTacac > 2:4773168/1‑93 (MQ=255)
cATTCCGCAATTTGTGCTGGGCGGCGCTGGTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTacac < 1:5007364/93‑1 (MQ=255)
aTTCCGCAATTTGTGCTGGGCGGCGCTGGTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTAcacc < 2:2416528/93‑1 (MQ=255)
aTTCCGCAATTTGTGCTGGGCGGCGCTGGTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTAcacc < 2:333299/93‑1 (MQ=255)
ttCCGCAATTTGTGCTGGGCGGCGCTGGTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTAcacca > 2:2358862/1‑93 (MQ=255)
gCAATTTGTGCTGGGCGGCGCTGGTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCaa > 1:1119088/1‑93 (MQ=255)
aaTTTGTGCTGGGCGGCGCTGGTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAAcc < 2:5635312/93‑1 (MQ=255)
aaTTTGTGCTGGGCGGCGCTGGTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGAATTCTGTCGCGCTGTAACTACACCACCAAcc > 1:1013308/1‑93 (MQ=255)
aTTTGTGCTGGGCGGCGCTGGTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGAATTCTGTCGCGCTGTAACTACACCACCAACCg > 2:6605802/1‑93 (MQ=255)
tgtgCTGGGCGGCGCTGGTCTAGTGGTGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGtca < 2:6421227/93‑3 (MQ=255)
tgtgCTGGGCGGCGCTGGTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTa < 1:812789/93‑1 (MQ=255)
tgCTGGGCGGCGCTGGTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACa < 2:2239935/93‑1 (MQ=255)
gCTGGGCGGCGCTGGTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACaa < 2:6080301/93‑1 (MQ=255)
cTGGGCGGCGCTGGTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAAc < 2:3988075/93‑1 (MQ=255)
gggCGGCGCTGGTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACct > 2:1197928/1‑93 (MQ=255)
ggcggcGCTGGTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACctc < 2:5863827/93‑1 (MQ=255)
ggcggcGCTGGTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACctc > 2:3580219/1‑93 (MQ=255)
gcggcgCTGGTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACctct < 2:2362627/93‑1 (MQ=255)
cggcgCTGGTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCta > 2:6301525/1‑93 (MQ=255)
cggcgCTGGTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCta < 1:377784/93‑1 (MQ=255)
gcgcTGGTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCtata < 1:5105377/93‑1 (MQ=255)
gcgcTGGTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCtata < 2:1776410/93‑1 (MQ=255)
gcgcTGGTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCtata > 1:1303012/1‑93 (MQ=255)
gcTGGTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATAtt > 2:5108172/1‑93 (MQ=255)
gcTGGTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATAtt < 1:3123290/93‑1 (MQ=255)
cTGGTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATtg < 2:5282888/93‑1 (MQ=255)
ggTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATtgtg > 2:3693767/1‑93 (MQ=255)
gTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGAATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTgg < 2:885632/93‑1 (MQ=255)
tCTAGTGATGTTCGGCATGGTACTGGAGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGc > 1:3979163/1‑93 (MQ=255)
cTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGAATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCg < 1:1461859/93‑1 (MQ=255)
cTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGAATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCg < 1:2868032/93‑1 (MQ=255)
tAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGa < 1:3922045/93‑1 (MQ=255)
tAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGAATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGa > 2:4063736/1‑93 (MQ=255)
aGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGAt > 1:6086856/1‑93 (MQ=255)
aGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGAATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGAt < 2:5011510/93‑1 (MQ=255)
gTGATGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATc < 2:6203892/93‑1 (MQ=255)
gTGATGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATc < 2:5155374/93‑1 (MQ=255)
gTGATGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATc < 2:2743407/93‑1 (MQ=255)
tGATGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCa < 2:1446454/93‑1 (MQ=255)
tGATGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCa < 1:3449576/93‑1 (MQ=255)
tGATGTTCGGCATGGTACTGGCGACAGGGATTCGAATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCa < 2:3088308/93‑1 (MQ=255)
gATGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAg < 1:3231528/93‑1 (MQ=255)
gATGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAg < 1:5447090/93‑1 (MQ=255)
gATGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAg > 1:5759183/1‑93 (MQ=255)
gATGTTCGGCATGGTACTGGAGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAg > 1:1344049/1‑93 (MQ=255)
tggtCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGtc < 1:2786166/90‑1 (MQ=255)
tGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGtc < 2:2338305/93‑1 (MQ=255)
ttCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGtctc < 2:3803644/93‑1 (MQ=255)
cGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCgg < 1:1087639/93‑1 (MQ=255)
cGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCgg < 2:1829615/93‑1 (MQ=255)
ggCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGc > 2:2902600/1‑93 (MQ=255)
ggCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGc < 2:4499909/93‑1 (MQ=255)
gCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCg < 1:4241337/93‑1 (MQ=255)
aTGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGtt > 1:1654494/1‑93 (MQ=255)
tGGTACTGGCGACAGGGATTCGAATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTTg > 2:1865557/1‑93 (MQ=255)
gTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTTGGc < 2:784142/93‑1 (MQ=255)
tACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTTGGCa < 2:1949499/93‑1 (MQ=255)
cTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTTGGCATg > 1:5265861/1‑93 (MQ=255)
cTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTTGGCATg < 2:2103452/93‑1 (MQ=255)
tGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTTGGCATGa < 2:5773554/93‑1 (MQ=255)
ggCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTTGGCATGAc < 1:4546549/93‑1 (MQ=255)
ggCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTTGGCATGAc > 1:1998355/1‑93 (MQ=255)
gCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTTGGCATGACt > 2:5940577/1‑93 (MQ=255)
cGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTTGGCATGACTc < 2:1255620/93‑1 (MQ=255)
cGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTTGGCATGACTc < 2:1847182/93‑1 (MQ=255)
cGACAGGGATTCGAATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTTGGCATGACTc < 1:5601922/93‑1 (MQ=255)
cGACAGGGATTCGAATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTTGGCATGACTc > 1:1718331/1‑93 (MQ=255)
gACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTTGGCATGACTcc > 1:2449753/1‑93 (MQ=255)
gACAGGGATTCGAATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTTGGCATGACTcc < 2:4910008/93‑1 (MQ=255)
aCAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTTGGCATGACTCCg < 2:3394985/93‑1 (MQ=255)
cAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTTGGCATGACTCCGa > 1:4758249/1‑93 (MQ=255)
aGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTTGGCATGACTCCGAc < 1:4673993/93‑1 (MQ=255)
aGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTTGGCATGACTCCGAc < 2:1302211/93‑1 (MQ=255)
aGGGATTCGAATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTTGGCATGACTCCGAc > 1:2708884/1‑93 (MQ=255)
aGGGATTCGAATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTTGGCATGACTCCGAc < 1:6605802/93‑1 (MQ=255)
gATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTTGGCATGACTCCGACGct < 1:3669636/93‑1 (MQ=255)
aTTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTTGGCATGACTCCGACGctc > 2:4676976/1‑93 (MQ=255)
aTTCGAATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTTGGCATGACTCCGACGctc > 2:4251322/1‑93 (MQ=255)
tCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTTGGCATGACTCCGACGctctc < 2:1827443/93‑1 (MQ=255)
tCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTTGGCATGACTCCGACGctctc > 1:5494238/1‑93 (MQ=255)
tCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTTGGCATGACTCCGACGctctc < 1:2165959/93‑1 (MQ=255)
gAATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTTGGCATGACTCCGACGCtctctc > 1:1817994/1‑93 (MQ=255)
|
AAATGGCGGTGCTGGTAGCCTCCATTCCGCAATTTGTGCTGGGCGGCGCTGGTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGAATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTTGGCATGACTCCGACGCTCTCTC > NC_000913/3030432‑3030614
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AAAAATGGCGGTGCTGGTAGCCTCCATTCCGCAATTTGTGCTGGGCGGCGCTGGTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGAATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTTGGCATGACTCCGACGCTCTCTCAC > NC_000913/3030430‑3030616
|
AAAAATGGCGGTGCTGGTAGCCTCCATTCCGCAATTTGTGCTGGGCGGCGCTGGTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGG < SRR4302547.4288669/94‑1 (MQ=60)
AAAAAGGGCGGTGCTGGTAGCCGCCATCCCGCAATTTGTGCTGGGCGGCGCTGGTCTAGTGATGTTAGGCATGGTACTGGCGACACGGATTCGG < SRR4302547.5873574/94‑1 (MQ=60)
AAAATGGCGGTGCTGGTAGGCTCCATTCCGCAATTTGTGCTGGGCGGCGCTGGTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGAA > SRR4302547.6547163/1‑94 (MQ=60)
AAAATGGCGGTGCTGGTAGCCTCCATTCCGCAATTTGTGCTGGGCGGCGCTGGTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGGA > SRR4302547.3179591/1‑94 (MQ=60)
AAATGGCGGTGCTGGTAGCCTCCATTCCGCAATTTGTGCTGGGCGGCGCTGGTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGGAT < SRR4302547.5680000/94‑1 (MQ=60)
AAATGGCGGTGCTGGTAGCCTCCATTCCGCAATTTGTGCTGGGCGGCGCTGGTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGAAT < SRR4302547.3981441/94‑1 (MQ=60)
ATGGCGGTGCTGGTAGCCTCCATTCCGCAATTTGTGCTGGGCGGCGCTGGTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGGATTC < SRR4302547.1099373/94‑1 (MQ=60)
GGTGCTGGTAGCCTCCATTCCGCAATTTGTGCTGGGCGGCGCTGGTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCG > SRR4302547.954740/1‑94 (MQ=60)
GGTGCTGGTAGCCTCCATTCCGCAATTTGTGCTGGGCGGCGCTGGTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCG < SRR4302547.6087374/94‑1 (MQ=60)
GTGCTGGTAGCCTCCATTCCGCAATTTGTGCTGGGCGGCGCTGGTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGC < SRR4302547.2994909/94‑1 (MQ=60)
gcgttgttggCTCCATTCCCCAATGTGTGCTGGGCGGCGCTGGTCTAGTGAGGTTCGACATGGTACTGGCGATAGGGATTCGGATTCTGTCGCG < SRR4302547.1384937/84‑1 (MQ=60)
CTGGTAGCCTCCATTCCGCAATTTGTGCTGGGCGGCGCTGGTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCT < SRR4302547.3291688/94‑1 (MQ=60)
TGGTAGCCTCCATTCCGCAATTTGTGCTGGGCGGCGCTGGTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTG > SRR4302547.1865778/1‑94 (MQ=60)
GGTAGCCTCCATTCCGCAATTTGTGCTGGGCGGCGCTGGTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGT < SRR4302547.5811254/94‑1 (MQ=60)
GGTAGCCTCCATTCCGCAATTTGTGCTGGGCGGCGCTGGTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGT < SRR4302547.5316448/94‑1 (MQ=60)
GGTAGCCTCCATTCCGCAATTTGTGCTGGGCGGCGCTGGTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGT < SRR4302547.5052995/94‑1 (MQ=60)
TAGCCTCCATTCCGCAATTTGTGCTGGGCGGCGCTGGTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAA < SRR4302547.6379000/94‑1 (MQ=60)
GCCTCCATTCCGCAATTTGTGCTGGGCGGCGCTGGTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGAATTCTGTCGCGCTGTAACT < SRR4302547.12304/94‑1 (MQ=60)
CTCCATTCCGCAATTTGTGCTGGGCGGCGCTGGTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTAC > SRR4302547.2067294/1‑94 (MQ=60)
TCCATTCCGCAATTTGTGCTGGGCGGCGCTGGTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACA > SRR4302547.4214641/1‑94 (MQ=60)
CATTCCGCAATTTGTGCTGGGCGGCGCTGGTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACC < SRR4302547.5110902/94‑1 (MQ=60)
TCCGCAATTTGTGCTGGGCGGCGCTGGTCTAGTGATGTTCGGCATGGTACTGGCGTCAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACC > SRR4302547.839699/1‑94 (MQ=60)
CGCAATTTGTGCTGGGCGGCGCTGGTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAA > SRR4302547.1141639/1‑94 (MQ=60)
CAATTTGTGCTGGGCGGCGCTGGTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGAATTCTGTCGCGCTGTAACTACACCACCAACC > SRR4302547.1033121/1‑94 (MQ=60)
TGTGCTGGGCGGCGCTGGTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTAC < SRR4302547.828224/94‑1 (MQ=60)
TGTGCTGGGCGGCGCTGGTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTAC < SRR4302547.213521/94‑1 (MQ=60)
GTGCTGGGCGGCGCTGGTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACA > SRR4302547.674900/1‑94 (MQ=60)
CTGGGCGGCGCTGGTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACC < SRR4302547.5859073/94‑1 (MQ=60)
TGGGCGGCGCTGGTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCT > SRR4302547.2949777/1‑94 (MQ=60)
TGGGCGGCGCTGGTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCT < SRR4302547.5372800/94‑1 (MQ=60)
GGCGGCGCTGGTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCT < SRR4302547.1830327/94‑1 (MQ=60)
CGGCGCTGGTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTAT < SRR4302547.384785/94‑1 (MQ=60)
GGCGCTGGTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATA > SRR4302547.1329230/1‑94 (MQ=60)
GCGCTGGTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATAT < SRR4302547.5210600/94‑1 (MQ=60)
GCTGGTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTG < SRR4302547.3185233/94‑1 (MQ=60)
GCTGGTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTG > SRR4302547.6352435/1‑94 (MQ=60)
TGGTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTG > SRR4302547.5796859/1‑94 (MQ=60)
tgtaTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGGTGTAACTACACCCCCAACCGTTACATCCTCTATATTGTGG < SRR4302547.4270969/90‑1 (MQ=60)
GGTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGG > SRR4302547.146931/1‑94 (MQ=60)
GGTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGG > SRR4302547.4626151/1‑94 (MQ=60)
GTCTAGTGATGTTCGGCATGGTCCTGGCGACAGGGATACGGATTCTGTCGCGCTGTAATTCCACCCCCAACCGTTACAACCTCCATATTGTTGC < SRR4302547.6470655/94‑1 (MQ=60)
GTCTAGTGATGTTCGGCATGGTACTGGAGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGC > SRR4302547.4060073/1‑94 (MQ=60)
TCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCG < SRR4302547.6413946/94‑1 (MQ=60)
CTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGA > SRR4302547.1749701/1‑94 (MQ=60)
CTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGAATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGA < SRR4302547.1491074/94‑1 (MQ=60)
CTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGAATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGA < SRR4302547.2925322/94‑1 (MQ=60)
TAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGAT > SRR4302547.6213128/1‑94 (MQ=60)
TAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGAT < SRR4302547.4001793/94‑1 (MQ=60)
TGATGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAG < SRR4302547.3519892/94‑1 (MQ=60)
TGATGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAG > SRR4302547.5878279/1‑94 (MQ=60)
TGATGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAG < SRR4302547.5505087/94‑1 (MQ=60)
TGATGTTCGGCATGGTACTGGAGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAG > SRR4302547.1371044/1‑94 (MQ=60)
GATGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGT < SRR4302547.3296024/94‑1 (MQ=60)
GATGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGT < SRR4302547.5559648/94‑1 (MQ=60)
ATGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTC < SRR4302547.1353757/94‑1 (MQ=60)
TGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCT > SRR4302547.5084307/1‑94 (MQ=60)
TGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCT < SRR4302547.4053402/94‑1 (MQ=60)
TGTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCT < SRR4302547.528386/94‑1 (MQ=60)
TGGTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCT < SRR4302547.2841974/94‑1 (MQ=60)
GTTCGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTC < SRR4302547.2050770/94‑1 (MQ=60)
CGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGC > SRR4302547.664137/1‑94 (MQ=60)
CGGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGC < SRR4302547.1109393/94‑1 (MQ=60)
GGCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCG > SRR4302547.1309166/1‑94 (MQ=60)
GCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGT < SRR4302547.4328067/94‑1 (MQ=60)
GCATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGT < SRR4302547.492096/94‑1 (MQ=60)
CATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTT > SRR4302547.2215321/1‑94 (MQ=60)
CATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTT > SRR4302547.1687136/1‑94 (MQ=60)
ATGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTTG < SRR4302547.1154498/94‑1 (MQ=60)
TGGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTTGG < SRR4302547.5140199/94‑1 (MQ=60)
GGTACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTTGGC < SRR4302547.3959792/94‑1 (MQ=60)
TACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTTGGCAT < SRR4302547.3012767/94‑1 (MQ=60)
ACTGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTTGGCATG > SRR4302547.5374310/1‑94 (MQ=60)
TGGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTTGGCATGAC > SRR4302547.2038108/1‑94 (MQ=60)
TGGCGACAGGGATTCGAATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTTGGCATGAC < SRR4302547.1116661/94‑1 (MQ=60)
GGCGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTTGGCATGACT < SRR4302547.4640563/94‑1 (MQ=60)
GCGACAGGGATTCGAATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTTGGCATGACTC > SRR4302547.1752120/1‑94 (MQ=60)
CGACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTTGGCATGACTCC > SRR4302547.2499255/1‑94 (MQ=60)
CGACAGGGATTCGAATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTTGGCATGACTCC < SRR4302547.3784487/94‑1 (MQ=60)
CGACAGGGATTCGAATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTTGGCATGACTCC < SRR4302547.5717487/94‑1 (MQ=60)
ACAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTTGGCATGACTCCGA > SRR4302547.4856836/1‑94 (MQ=60)
CAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTTGGCATGACTCCGAC > SRR4302547.2796499/1‑94 (MQ=60)
CAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTTGGCATGACTCCGAC < SRR4302547.5630216/94‑1 (MQ=60)
CAGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTTGGCATGACTCCGAC > SRR4302547.354399/1‑94 (MQ=60)
CAGGGATTCGAATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTTGGCATGACTCCGAC > SRR4302547.2763268/1‑94 (MQ=60)
CAGGGATTCGAATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCAGCGTTGGCATGACTCCGAC > SRR4302547.5586089/1‑94 (MQ=60)
AGGGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTTGGCATGACTCCGACG < SRR4302547.4770794/94‑1 (MQ=60)
AGGGATTCGAATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTTGGCATGACTCCGACG < SRR4302547.6743312/94‑1 (MQ=60)
GGGATGCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTTGGCATGACTCCGACGC < SRR4302547.4694759/94‑1 (MQ=60)
GGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTTGGCATGACTCCGACGCT < SRR4302547.2084171/94‑1 (MQ=60)
GGATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTTGGCATGACTCCGACGCT > SRR4302547.2549506/1‑94 (MQ=60)
GATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTTGGCATGACTCCGACGCTC > SRR4302547.1558528/1‑94 (MQ=60)
GATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTTGGCATGACTCCGACGCTC < SRR4302547.3744476/94‑1 (MQ=60)
ATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTTGGCATGACTCCGACGCTCT > SRR4302547.3462475/1‑94 (MQ=60)
ATTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTTGGCATGACTCCGACGCTCT > SRR4302547.4773954/1‑94 (MQ=60)
ATTCGAATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTTGGCATGACTCCGACGCTCT > SRR4302547.2847290/1‑94 (MQ=60)
ATTCGAATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTTGGCATGACTCCGACGCTCT > SRR4302547.5427969/1‑94 (MQ=60)
TTCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTTGGCATGACTCCGACGCTCTC > SRR4302547.5607681/1‑94 (MQ=60)
TCGGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTTGGCATGACTCCGACGCTCTCT < SRR4302547.2209278/94‑1 (MQ=60)
CGAATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTTGGCATGACTCCGACGCTCTCTC > SRR4302547.1853923/1‑94 (MQ=60)
GGATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTTGGCATGACTCCGACGCTCTCTCA < SRR4302547.4285494/94‑1 (MQ=60)
GATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGTCGTTGGCATGACTCCGACGCTCTCTCAC < SRR4302547.4551820/94‑1 (MQ=60)
GATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTTGGCATGACTCCGACGCTCTCTCAC < SRR4302547.1308512/94‑1 (MQ=60)
GATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTTGGCATGACTCCGACGCTCTCTCAC > SRR4302547.1968221/1‑94 (MQ=60)
|
AAAAATGGCGGTGCTGGTAGCCTCCATTCCGCAATTTGTGCTGGGCGGCGCTGGTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGAATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTTGGCATGACTCCGACGCTCTCTCAC > NC_000913/3030430‑3030616
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
