Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
593 |
264.2 |
13311096 |
97.8% |
13018251 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,038,976 |
C→T |
E39K (GAA→AAA) |
ygfY ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,038,976 | 0 | C | T | 88.1%
| 858.4
/ 75.4
| 278 | E39K (GAA→AAA) | ygfY | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (16/17); new base T (118/127); total (134/144) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.27e-01 |
Only 100 of 285 total aligned reads displayed.
GTTCTGCATCGGCCGGTTTACCGTGATTCATCAGCCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTCGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCGCGCATACCACGGCGGCATGCCCAATGAATG > NC_000913/3038886‑3039067
|
tCTGCATCGGCCGGTTTACCGTGATTCATCAGCCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCa < 1:1008956/93‑1 (MQ=255)
tGCATCGGCCAGTTTACCGTGATTCATCAGCCAGTTAACCAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATc < 2:2488284/93‑1 (MQ=255)
aTCGGCCGGTTTACCGTGATTCATCAGCCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCt < 1:4281963/93‑1 (MQ=255)
aTCGGCCGGTTTACCGTGATTCATCAGCCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCt > 2:2373675/1‑93 (MQ=255)
aTCGGCCGGTTTACCGTGATTCATCAGCCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTCGTCATCGCt < 1:4053383/93‑1 (MQ=255)
cGGCCGGTTTACCGTGATTCATCAGCCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTa > 1:1018117/1‑93 (MQ=255)
ggCCGGTTTACCGTGATTCATCAGCCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTaa < 2:1390665/93‑1 (MQ=255)
gCCGGTTTACCGTGATTCATCAGCCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAg > 2:5261198/1‑93 (MQ=255)
gCCGGTTTACCGTGATTCATCAGCCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAg > 2:1905027/1‑93 (MQ=255)
gCCGGTTTACCGTGATTCATCAGCCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAg > 1:3054750/1‑93 (MQ=255)
gCCGGTTTACCGTGATTCATCAGCCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTCGTCATCGCTTAAg > 2:2123059/1‑93 (MQ=255)
cGGTTTACCGTGATTCATCAGCCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCt > 1:1201561/1‑93 (MQ=255)
cGGTTTACCGTGATTCATCAGCCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCt > 2:1100555/1‑93 (MQ=255)
cGGTTTACCGTGATTCATCAGCCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCt < 2:6356986/93‑1 (MQ=255)
gTTTACCGTGATTCATCAGCCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGt > 2:2594153/1‑93 (MQ=255)
tttACCGTGATTCATCAGCCAGTTAAACAGGTCCGGATCGTCACATTCCAGTAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTc < 1:4809448/93‑1 (MQ=255)
tttACCGTGATTCATCAGCCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTgac > 1:57021/1‑91 (MQ=255)
ttACCGTGATTCATCAGCCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCg < 2:4157819/93‑1 (MQ=255)
tACCGTGATTCATCAGCCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGt < 1:6445342/93‑1 (MQ=255)
aCCGTGATTCATCAGCCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTa > 2:1721887/1‑93 (MQ=255)
ccGTGATTCATCAGCCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTAc > 1:2488185/1‑93 (MQ=255)
gTGATTCATCAGCCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTc < 1:1835540/93‑1 (MQ=255)
tGATTCATCAGCCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCa > 2:4411608/1‑93 (MQ=255)
ggATTCATCAGCCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCa < 2:1642062/92‑1 (MQ=255)
tcatcaGCCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGtt < 2:4826106/93‑1 (MQ=255)
tcatcaGCCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGtt > 2:6450797/1‑93 (MQ=255)
catcaGCCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTc < 2:916559/93‑1 (MQ=255)
atcaGCCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCg > 2:1322764/1‑93 (MQ=255)
aGCCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTCGTCATCGCTTAAGCTGTCGTACTCATGTTCGaaa < 1:5302265/93‑1 (MQ=255)
gCCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGaaaa < 1:2851408/93‑1 (MQ=255)
gCCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTCGTCATCGCTTAAGCTGTCGTACTCATGTTCGaaaa < 1:6384834/93‑1 (MQ=255)
ccAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGaaaaa > 2:3838285/1‑93 (MQ=255)
ccAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGaaaaa < 1:4134497/93‑1 (MQ=255)
cAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAAc < 2:5871684/93‑1 (MQ=255)
cAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAAc > 2:5609539/1‑93 (MQ=255)
cAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAAc < 2:2995300/93‑1 (MQ=255)
cAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAAc > 1:658870/1‑93 (MQ=255)
gTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTCGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACgg > 2:6481370/1‑93 (MQ=255)
ttAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGc < 1:4378155/93‑1 (MQ=255)
tAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCa < 2:3328859/93‑1 (MQ=255)
aaCAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATg > 1:4528164/1‑93 (MQ=255)
aGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCTTGTTCGAAAAACGGCATGAtt < 1:2200170/93‑1 (MQ=255)
aGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTCGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGAtt > 1:3221524/1‑93 (MQ=255)
ggTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTg > 2:3337846/1‑93 (MQ=255)
ggTCCGGATCGCCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTg > 2:4545862/1‑93 (MQ=255)
gTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGa > 2:4943947/1‑93 (MQ=255)
gTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGa > 1:1637972/1‑93 (MQ=255)
tCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGaa > 1:1948371/1‑93 (MQ=255)
cGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAat < 2:4572746/93‑1 (MQ=255)
cGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAat > 1:3141899/1‑93 (MQ=255)
ggATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAata < 1:3490169/93‑1 (MQ=255)
gATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAatat < 2:6214545/93‑1 (MQ=255)
aTCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATc < 1:1400177/93‑1 (MQ=255)
tCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCg < 2:2779602/93‑1 (MQ=255)
tCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCg > 1:3931451/1‑93 (MQ=255)
cGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGa < 1:3358250/93‑1 (MQ=255)
tCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGt < 2:6614642/93‑1 (MQ=255)
tCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGt < 1:2928708/93‑1 (MQ=255)
cacaTTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGtt > 2:1485160/1‑93 (MQ=255)
cacaTTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGtt > 1:823669/1‑93 (MQ=255)
cacaTTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGtt < 2:4732805/93‑1 (MQ=255)
cacaTTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGtt < 1:4583723/93‑1 (MQ=255)
acaTTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTc < 1:5495762/93‑1 (MQ=255)
caTTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTcg > 1:5024481/1‑93 (MQ=255)
caTTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTcg > 1:6003333/1‑93 (MQ=255)
aTTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTcgc > 1:6323940/1‑93 (MQ=255)
ccAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCGCGCa < 1:6543843/93‑1 (MQ=255)
cagcagACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCGCGCAt < 2:3687873/93‑1 (MQ=255)
cagcagACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCGCGCAt < 2:104698/93‑1 (MQ=255)
cagACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCGCGCATAcc < 1:2588173/93‑1 (MQ=255)
cagACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCGCGCATAcc < 1:514078/93‑1 (MQ=255)
cagACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCGCGCATAcc > 1:3741772/1‑93 (MQ=255)
agACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCGCGCATACCa < 1:3453441/93‑1 (MQ=255)
agACGAATAAAGATGCGTTTTTTGTCATAGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGGTCGCGCATACCa > 2:4286937/1‑93 (MQ=255)
gACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGTCATGATTGAAATATCGAGTTCGCGCATACCAc > 2:4041083/1‑93 (MQ=255)
gACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCGCGCATACCAc < 1:472589/93‑1 (MQ=255)
gACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCGCGCATACCAc > 1:4889748/1‑93 (MQ=255)
gACGAATAAAGATGCGTTTTTCGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCGCGCATACCAc > 1:6231022/1‑93 (MQ=255)
cGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCGCGCATACCAcgg > 2:5111775/1‑93 (MQ=255)
cGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGGCGTACTCATGTTCGGAAAACGGCATGATTGAAATATCGAGTTCGCCCATCACAcgg > 2:6291404/1‑93 (MQ=255)
gAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTTGAAAAACGGCATGATTGAAATATCGAGTTCGCGCATACCAcggc < 2:3046555/93‑1 (MQ=255)
gAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCGCGCATACCAcggc > 2:1784204/1‑93 (MQ=255)
gAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCGCGCATACCAcggc < 1:2092555/93‑1 (MQ=255)
aaTAAAGATGCGTTTTTTGTCATCGGTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAACTATCGAGTGCGCGCATACCAcggcg > 2:6094045/1‑93 (MQ=255)
tAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCGCGCATACCACggcggc > 2:354763/1‑93 (MQ=255)
tAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCGCGCATACCACggcggc < 2:1984881/93‑1 (MQ=255)
aaaGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCGCGCATACCACGGCGGCa < 2:575001/93‑1 (MQ=255)
aaGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCGCGCATACCACGGCGGCAt < 2:4439213/93‑1 (MQ=255)
aaGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCGCGCATACCACGGCGGCAt > 2:2732342/1‑93 (MQ=255)
aGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCGCGCATACCACGGCGGCATg < 2:3970633/93‑1 (MQ=255)
gATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCGCGCATACCACGGCGGCATGc > 1:2577248/1‑93 (MQ=255)
tGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCGCGCATACCACGGCGGCATGccc > 1:5116089/1‑93 (MQ=255)
tGCGTTGTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCGCGCATACCACGGCGGCATGccc < 2:1292945/93‑1 (MQ=255)
cGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCGCGCATACCACGGCGGCATGCCCaa < 2:2892964/93‑1 (MQ=255)
gTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCGCGCATACCACGGCGGCATGCCCaat > 1:5651042/1‑93 (MQ=255)
gTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCGCGCATACCACGGCGGCATGCCCaat > 2:2970867/1‑93 (MQ=255)
ttttttGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCGCGCATACCACGGCGGCATGCCCaatg > 1:2980007/1‑93 (MQ=255)
ttttttGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCGCGCATACCACGGCGGCATGCCCaatg > 1:4233498/1‑93 (MQ=255)
ttttGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCGCGCATACCACGGCGGCATGCCCaatgaa < 1:465663/93‑1 (MQ=255)
tCGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCGCGCATACCACGGCGGCATGCCCaatgaatg < 1:2722132/93‑1 (MQ=255)
|
GTTCTGCATCGGCCGGTTTACCGTGATTCATCAGCCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTCGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCGCGCATACCACGGCGGCATGCCCAATGAATG > NC_000913/3038886‑3039067
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AGTTCTGCATCGGCCGGTTTACCGTGATTCATCAGCCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTCGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCGCGCATACCACGGCGGCATGCCCAATGAATGCG > NC_000913/3038885‑3039069
|
AGTTCTGCATCGGCCGGTTTACCGTGATTCATCAGCCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGT < SRR4302547.1208438/94‑1 (MQ=60)
GTTCTGCATCGGCCGGTTTACCGTGATTCATCAGCCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTC > SRR4302547.4468373/1‑94 (MQ=60)
TTCTGCATCGGCCGGTTTACCGTGATTCATCAGCCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCA < SRR4302547.2676679/94‑1 (MQ=60)
TTCTGCATCGGCCGGTTTACCGTGATTCATCAGCCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCA < SRR4302547.5887224/94‑1 (MQ=60)
TCTGCATCGGCCGGTTTACCGTGATTCATCAGCCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCAT < SRR4302547.1028662/94‑1 (MQ=60)
CTGCATCGGCCGGTTTACCGTGATTCATCAGCCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATC > SRR4302547.3486273/1‑94 (MQ=60)
CTGCATCGGCCGGTTTACCGTGATTCATCAGCCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATC < SRR4302547.2213439/94‑1 (MQ=60)
GCATCGGCCGGTTTACCGTGATTCATCAGCCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTCGTCATCGC < SRR4302547.40960/94‑1 (MQ=60)
CATCGGCCGGTTTACCGTGATTCATCAGCCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCT > SRR4302547.4635946/1‑94 (MQ=60)
CATCGGCCGGTTTACCGTGATTCATCAGCCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTCGTCATCGCT < SRR4302547.364563/94‑1 (MQ=60)
ATCGGCCGGTTTACCGTGATTCATCAGCCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTT < SRR4302547.4369925/94‑1 (MQ=60)
ATCGGCCGGTTTACCGTGATTCATCAGCCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTT > SRR4302547.1900748/1‑94 (MQ=60)
ATCGGCCGGTTTACCGTGATTCATCAGCCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTCGTCATCGCTT > SRR4302547.3281890/1‑94 (MQ=60)
ATCGGCCGGTTTACCGTGATTCATCAGCCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTCGTCATCGCTT < SRR4302547.4135701/94‑1 (MQ=60)
TCGGCCGGTTTACCGTGATTCATCAGCCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTA > SRR4302547.1038062/1‑94 (MQ=60)
GGCCGGTTTACCGTGATTCATCAGCCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAG > SRR4302547.3115543/1‑94 (MQ=60)
GGCCGGTTTACCGTGATTCATCAGCCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAG > SRR4302547.3899789/1‑94 (MQ=60)
GGCCGGTTTACCGTGATTCATCAGCCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAG < SRR4302547.1802643/94‑1 (MQ=60)
CCGGTTTACCGTGATTCATCAGCCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCT > SRR4302547.1225815/1‑94 (MQ=60)
GGTTTACCGTGATTCATCAGCCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGT > SRR4302547.2911463/1‑94 (MQ=60)
GGTTTACCGTGATTCATCAGCCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGT < SRR4302547.5009729/94‑1 (MQ=60)
GGTTTACCGTGATTCATCAGACAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTCGTCATCGCTTAAGCTGT > SRR4302547.6628995/1‑94 (MQ=60)
GTTTACCGTGATTCATCAGCCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTC > SRR4302547.3307836/1‑94 (MQ=60)
GTTTACCGTGATTCATCAGCCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGAC > SRR4302547.58098/1‑94 (MQ=60)
TTTACCGTGATTCATCAGCCAGTTAAACAGGTCCGGATCGTCACATTCCAGTAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCG < SRR4302547.4909137/94‑1 (MQ=60)
TTTACCGTGATTCATCAGCCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCG > SRR4302547.5738963/1‑94 (MQ=60)
TTTACCGTGATTCATCAGCCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCG > SRR4302547.3593247/1‑94 (MQ=60)
TTACCGTGATTCATCAGCCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGT > SRR4302547.6434267/1‑94 (MQ=60)
TACCGTGATTCATCAGCCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTA < SRR4302547.6579638/94‑1 (MQ=60)
ACCGTGATTCATCAGCCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTAC > SRR4302547.2538457/1‑94 (MQ=60)
CGTGATTCATCAGCCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTC < SRR4302547.1028687/94‑1 (MQ=60)
GTGATTCATCAGCCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCA < SRR4302547.6505668/94‑1 (MQ=60)
GTGATTCATCAGCCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCA < SRR4302547.1871826/94‑1 (MQ=60)
GATTCATCAGCCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATG < SRR4302547.306856/94‑1 (MQ=60)
ATTCATCAGCCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGT > SRR4302547.4830897/1‑94 (MQ=60)
ATTCATCAGCCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGT > SRR4302547.3082301/1‑94 (MQ=60)
TTCATCAGCCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTCGTCATCGCTTAAGCTGTCGTACTCATGTT < SRR4302547.5551477/94‑1 (MQ=60)
TCATCAGCCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTC < SRR4302547.4047520/94‑1 (MQ=60)
CATCAGCCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCG > SRR4302547.5045582/1‑94 (MQ=60)
CATCAGCCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCG > SRR4302547.416197/1‑94 (MQ=60)
ATCAGCCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGA > SRR4302547.3123760/1‑94 (MQ=60)
TCAGCCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTCGTCATCGCTTAAGCTGTCGTACTCATGTTCGAA > SRR4302547.2496955/1‑94 (MQ=60)
CAGCCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAA > SRR4302547.5632225/1‑94 (MQ=60)
AGCCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTCGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAA < SRR4302547.5411641/94‑1 (MQ=60)
GCCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAA < SRR4302547.2908372/94‑1 (MQ=60)
GCCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTCGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAA < SRR4302547.6518067/94‑1 (MQ=60)
ACCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAA < SRR4302547.6251957/94‑1 (MQ=60)
CCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAAC < SRR4302547.4218619/94‑1 (MQ=60)
CCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAAC > SRR4302547.5363624/1‑94 (MQ=60)
CCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAAC < SRR4302547.5495820/94‑1 (MQ=60)
CCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAAC < SRR4302547.5802279/94‑1 (MQ=60)
CCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAAC > SRR4302547.671002/1‑94 (MQ=60)
CAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACG < SRR4302547.727934/94‑1 (MQ=60)
AGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGG > SRR4302547.4663376/1‑94 (MQ=60)
AGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGG > SRR4302547.2561727/1‑94 (MQ=60)
GTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGC > SRR4302547.5132854/1‑94 (MQ=60)
TTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCA < SRR4302547.4468143/94‑1 (MQ=60)
TAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCAT < SRR4302547.1834494/94‑1 (MQ=60)
TAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCAT < SRR4302547.48762/94‑1 (MQ=60)
AAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATG > SRR4302547.4621745/1‑94 (MQ=60)
AACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGA < SRR4302547.221703/94‑1 (MQ=60)
CAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTCGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATT > SRR4302547.3285789/1‑94 (MQ=60)
AGGTCCGGATCGTCACATTCCGGCAGACGAATAAAGATGCGTTCTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTG < SRR4302547.6691260/94‑1 (MQ=60)
AGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCTTGTTCGAAAAACGGCATGATTG < SRR4302547.2244374/94‑1 (MQ=60)
GGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGA > SRR4302547.1670350/1‑94 (MQ=60)
GGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGA < SRR4302547.497535/94‑1 (MQ=60)
GGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGA > SRR4302547.5243867/1‑94 (MQ=60)
GTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAA > SRR4302547.1986995/1‑94 (MQ=60)
GTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAA < SRR4302547.4450936/94‑1 (MQ=60)
GTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAA < SRR4302547.6690190/94‑1 (MQ=60)
CCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAAT < SRR4302547.436506/94‑1 (MQ=60)
CCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAAT > SRR4302547.3204314/1‑94 (MQ=60)
CCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAAT < SRR4302547.3205979/94‑1 (MQ=60)
CGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATA < SRR4302547.6421921/94‑1 (MQ=60)
CGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATA > SRR4302547.3443718/1‑94 (MQ=60)
CGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATA < SRR4302547.2633249/94‑1 (MQ=60)
GGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATAT > SRR4302547.3965570/1‑94 (MQ=60)
GGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATAT < SRR4302547.3561390/94‑1 (MQ=60)
GGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAAAGGCATGATTGAAATAT > SRR4302547.4606835/1‑94 (MQ=60)
GGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTAGTACTCATGTTCGAACAACCGCATGATTGAAATAT > SRR4302547.1204194/1‑94 (MQ=60)
GGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTCGTCATCGCTTAAGCTGTCGTACTCATGTTCGAACACCGGCATGATTGAAATAT > SRR4302547.1979273/1‑94 (MQ=60)
GATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTCGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATC > SRR4302547.1531352/1‑94 (MQ=60)
ATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCG < SRR4302547.1428197/94‑1 (MQ=60)
ATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCG > SRR4302547.4011411/1‑94 (MQ=60)
ATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCG > SRR4302547.2708662/1‑94 (MQ=60)
TCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGA > SRR4302547.6570652/1‑94 (MQ=60)
CGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAG < SRR4302547.3426376/94‑1 (MQ=60)
GTCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGT < SRR4302547.4203195/94‑1 (MQ=60)
TCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTT > SRR4302547.839386/1‑94 (MQ=60)
TCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTT < SRR4302547.2987100/94‑1 (MQ=60)
TCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTT < SRR4302547.594744/94‑1 (MQ=60)
TCACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTT < SRR4302547.3008817/94‑1 (MQ=60)
CACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTC > SRR4302547.1446768/1‑94 (MQ=60)
CACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTC > SRR4302547.4725908/1‑94 (MQ=60)
CACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTC < SRR4302547.4678587/94‑1 (MQ=60)
ACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCG < SRR4302547.5609234/94‑1 (MQ=60)
ACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCG > SRR4302547.5128295/1‑94 (MQ=60)
ACATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCG > SRR4302547.6127918/1‑94 (MQ=60)
CATTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCGC > SRR4302547.6455433/1‑94 (MQ=60)
ATTCCAGCAGACGAATAAAGATGCGTTTTTCGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCGCG > SRR4302547.299293/1‑94 (MQ=60)
TTCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCGCGC > SRR4302547.4790602/1‑94 (MQ=60)
TCCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCGCGCA < SRR4302547.1285088/94‑1 (MQ=60)
CCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCGCGCAT < SRR4302547.6680039/94‑1 (MQ=60)
CCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCGCGCAT < SRR4302547.2087632/94‑1 (MQ=60)
CCAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCGCGCAT < SRR4302547.259630/94‑1 (MQ=60)
CAGCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCGCGCATA > SRR4302547.5221684/1‑94 (MQ=60)
GCAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCGCGCATACC > SRR4302547.3818155/1‑94 (MQ=60)
GCAGACGAATAAAGATGCGTTTTTCGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGGTTGAAATATCGAGTTCGCGCATACC < SRR4302547.245217/94‑1 (MQ=60)
CAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCGCGCATACCA < SRR4302547.831513/94‑1 (MQ=60)
CAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCGCGCATACCA < SRR4302547.2640389/94‑1 (MQ=60)
CAGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCGCGCATACCA < SRR4302547.523408/94‑1 (MQ=60)
CAGACGAATAAAGATGCGTTTTTCGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCGCGCATACCA > SRR4302547.6522217/1‑94 (MQ=60)
AGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCGCGCATACCAC < SRR4302547.3523845/94‑1 (MQ=60)
AGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCGCGCATACCAC > SRR4302547.4991021/1‑94 (MQ=60)
AGACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCGCGCATACCAC > SRR4302547.4816322/1‑94 (MQ=60)
AGACGAATAAAGATGCGTTTTTCGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCGCGCATACCAC > SRR4302547.6360447/1‑94 (MQ=60)
AGACGAATAAAGATGCGTTTTTCGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCGCGCATACCAC < SRR4302547.4235977/94‑1 (MQ=60)
GACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCGCGCATACCACG < SRR4302547.3137920/94‑1 (MQ=60)
GACGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCGCGCATACCACG < SRR4302547.481273/94‑1 (MQ=60)
CGAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCGCGCATACCACGGC < SRR4302547.3540906/94‑1 (MQ=60)
GAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCGCGCATACCACGGCG > SRR4302547.4699452/1‑94 (MQ=60)
GAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCGCGCATACCACGGCG < SRR4302547.2134260/94‑1 (MQ=60)
GAATAAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCGCGCATACCACGGCG < SRR4302547.4219798/94‑1 (MQ=60)
AAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCGCGCATACCACGGCGGCAT > SRR4302547.1306152/1‑94 (MQ=60)
AAAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCGCGCATACCACGGCGGCAT > SRR4302547.3336802/1‑94 (MQ=60)
AAGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCGCGCATACCACGGCGGCATG < SRR4302547.4339512/94‑1 (MQ=60)
AGATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCGCGCATACCACGGCGGCATGC > SRR4302547.2629261/1‑94 (MQ=60)
GATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCGCGCATACCACGGCGGCATGCC > SRR4302547.6150590/1‑94 (MQ=60)
ATGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCGCGCATACCACGGCGGCATGCCC > SRR4302547.5221510/1‑94 (MQ=60)
TGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCGCGCATACCACGGCGGCATGCCCA < SRR4302547.5218889/94‑1 (MQ=60)
TGCGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCGCGCATACCACGGCGGCATGCCCA < SRR4302547.2879470/94‑1 (MQ=60)
GGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCGCGCATACCACGGCGGCATGCCCAAT < SRR4302547.1105488/94‑1 (MQ=60)
CGTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCGCGCATACCACGGCGGCATGCCCAAT > SRR4302547.5767702/1‑94 (MQ=60)
GTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCGCGCATACCACGGCGGCATGCCCAATG > SRR4302547.4320050/1‑94 (MQ=60)
GTTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCGCGCATACCACGGCGGCATGCCCAATG > SRR4302547.3039306/1‑94 (MQ=60)
TTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCGCGCATACCACGGCGGCATGCCCAATGA > SRR4302547.860416/1‑94 (MQ=60)
TTTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCGCGCATACCACGGCGGCATGCCCAATGA < SRR4302547.2630670/94‑1 (MQ=60)
TTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCGCGCATACCACGGCGGCATGCCCAATGAA > SRR4302547.5277656/1‑94 (MQ=60)
TTTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCGCGCATACCACGGCGGCATGCCCAATGAA < SRR4302547.2868603/94‑1 (MQ=60)
TTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATTATTGAAATATCGAGTTCGCGCATACCACGGCGGCATGCCCAATGAAT < SRR4302547.6502887/94‑1 (MQ=60)
TTTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCGCGCATACCACGGCGGCATGCCCAATGAAT < SRR4302547.474245/94‑1 (MQ=60)
TTTCGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCGCGCATACCACGGCGGCATGCCCAATGAAT < SRR4302547.1000208/94‑1 (MQ=60)
TTTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCGCGCATACCACGGCGGCATGCCCAATGAATG < SRR4302547.1501426/94‑1 (MQ=60)
TTGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCGCGCATACCACGGCGGCATGCCCAATGAATGC > SRR4302547.2159055/1‑94 (MQ=60)
TCGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCGCGCATACCACGGCGGCATGCCCAATGAATGC < SRR4302547.2776797/94‑1 (MQ=60)
TGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCGCGCATACCACGGCGGCATGCCCAATGAATGCG > SRR4302547.4336107/1‑94 (MQ=60)
TGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCGCGCATACCACGGCGGCATGCCCAATGAATGCG < SRR4302547.2266123/94‑1 (MQ=60)
CGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCGCGCATACCACGGCGGCATGCCCAATGAATGCG > SRR4302547.6578416/1‑94 (MQ=60)
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AGTTCTGCATCGGCCGGTTTACCGTGATTCATCAGCCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGACGAATAAAGATGCGTTTTTCGTCATCGCTTAAGCTGTCGTACTCATGTTCGAAAAACGGCATGATTGAAATATCGAGTTCGCGCATACCACGGCGGCATGCCCAATGAATGCG > NC_000913/3038885‑3039069
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
