Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
593 |
264.2 |
13311096 |
97.8% |
13018251 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,222,944 |
4 bp→AGCA |
coding (2671‑2674/3093 nt) |
b3076 → |
evolved beta‑D‑galactosidase alpha subunit |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,222,944 | 0 | C | A | 100.0%
| 821.1
/ NA
| 212 | Q891S (CAA→AGC) | b3076 | evolved beta‑D‑galactosidase alpha subunit |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (104/108); total (104/108) |
| * | NC_000913 | 3,222,945 | 0 | A | G | 100.0%
| 768.2
/ NA
| 212 | Q891S (CAA→AGC) | b3076 | evolved beta‑D‑galactosidase alpha subunit |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (104/108); total (104/108) |
| * | NC_000913 | 3,222,946 | 0 | A | C | 100.0%
| 772.9
/ NA
| 212 | Q891S (CAA→AGC) | b3076 | evolved beta‑D‑galactosidase alpha subunit |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base C (104/108); total (104/108) |
| * | NC_000913 | 3,222,947 | 0 | G | A | 99.1%
| 800.0
/ NA
| 212 | A892T (GCC→ACC) | b3076 | evolved beta‑D‑galactosidase alpha subunit |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (104/106); minor base C (0/2); total (104/108) |
| Fisher's exact test for biased strand distribution p-value = 4.98e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 213 total aligned reads displayed.
GATCAGGTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCCAAGCCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACTGAC > NC_000913/3222863‑3223026
||||
gATCAGGTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGAt < 2:4503572/93‑1 (MQ=255)
gATCAGGTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGAt > 2:2318611/1‑93 (MQ=255)
gATCAGGTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGAt < 1:837315/93‑1 (MQ=255)
aTCAGGTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATg > 2:2479770/1‑93 (MQ=255)
aTCAGGTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATg > 1:922717/1‑93 (MQ=255)
tCAGGTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGc < 2:58721/93‑1 (MQ=255)
ggTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCAt < 2:5375220/93‑1 (MQ=255)
ggTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCAt < 2:5331079/93‑1 (MQ=255)
gTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATg < 1:5241885/93‑1 (MQ=255)
tGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGt > 1:6586243/1‑93 (MQ=255)
ggCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGtt > 1:1140879/1‑93 (MQ=255)
gCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTc < 2:4315344/93‑1 (MQ=255)
gCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTc > 2:5820880/1‑93 (MQ=255)
gTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCga > 2:4415266/1‑93 (MQ=255)
gTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCga > 1:5681957/1‑93 (MQ=255)
tATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCgag > 1:3843364/1‑93 (MQ=255)
aTTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCgaga < 1:1255107/93‑1 (MQ=255)
ttACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGaa > 2:5520019/1‑93 (MQ=255)
cGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTa < 1:5865271/93‑1 (MQ=255)
cGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTa < 2:3884893/93‑1 (MQ=255)
cGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTa > 2:5315354/1‑93 (MQ=255)
ggTCGTGTACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCCCCGTCGATGCCATGTTCGAGAACTAt < 1:2194694/93‑1 (MQ=255)
ggTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTAt > 1:869574/1‑93 (MQ=255)
ggTCGTGGACCGAGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTAt < 2:1038068/93‑1 (MQ=255)
ggTCGTCGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTAt < 1:4713948/93‑1 (MQ=255)
gTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATc > 2:427497/1‑93 (MQ=255)
gTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATc < 1:4894194/93‑1 (MQ=255)
cGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATccc < 2:394994/93‑1 (MQ=255)
tGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCtt < 1:6515820/93‑1 (MQ=255)
tGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCtt < 2:3149118/93‑1 (MQ=255)
tGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCtt > 1:407925/1‑93 (MQ=255)
gcccGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTcc < 1:4908791/91‑1 (MQ=255)
gACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTcc < 1:4985750/93‑1 (MQ=255)
gACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTcc < 2:3199660/93‑1 (MQ=255)
gACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTcc < 2:1122052/93‑1 (MQ=255)
gACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTcc < 2:4930899/93‑1 (MQ=255)
ccGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCg > 1:1513045/1‑93 (MQ=255)
ccGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCg > 1:3922033/1‑93 (MQ=255)
cGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGc < 2:1818452/93‑1 (MQ=255)
gggCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCa < 1:718163/93‑1 (MQ=255)
ggCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAg > 1:2824239/1‑93 (MQ=255)
cGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGaa < 2:5470614/93‑1 (MQ=255)
aaaaCTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGaaca > 1:4738232/1‑93 (MQ=255)
aaaaCTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGaaca < 2:2075789/93‑1 (MQ=255)
aaaCTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGaacaa > 2:2980471/1‑93 (MQ=255)
aaCTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGaacaac < 1:6274779/93‑1 (MQ=255)
aaCTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGaacaac > 1:5622075/1‑93 (MQ=255)
aCTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACg > 2:4144047/1‑93 (MQ=255)
tACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGt > 1:2414427/1‑93 (MQ=255)
tACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCATTCCCGCAGAACAACgga > 1:1432314/1‑92 (MQ=255)
aCGCTGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTa < 1:6379367/93‑1 (MQ=255)
aCGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTa > 2:2377416/1‑93 (MQ=255)
aCGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTa < 2:6117546/93‑1 (MQ=255)
gCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAAc > 2:3738837/1‑93 (MQ=255)
gCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAAc < 2:6256847/93‑1 (MQ=255)
ccGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAAcc > 1:2688474/1‑93 (MQ=255)
ccGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAAcc > 1:3508510/1‑93 (MQ=255)
ccGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAAcc > 2:1210944/1‑93 (MQ=255)
cGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCg > 2:5197560/1‑93 (MQ=255)
gACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGt < 1:5334000/93‑1 (MQ=255)
gACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGt > 1:1825327/1‑93 (MQ=255)
aCAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTc > 2:1542942/1‑93 (MQ=255)
aCAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTc > 1:4752750/1‑93 (MQ=255)
aCAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGGAACCGTc > 1:5813290/1‑93 (MQ=255)
cagccagcAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCa < 2:2241614/93‑1 (MQ=255)
cagccagcAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCa > 2:1394583/1‑93 (MQ=255)
cagccagcAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCa > 1:4291619/1‑93 (MQ=255)
agccagcAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAg < 1:2964047/93‑1 (MQ=255)
gccagcAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGc > 2:2550901/1‑93 (MQ=255)
gccagcAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGc > 2:1323963/1‑93 (MQ=255)
ccagcAGGCTAACATCATCGGTATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCa > 1:5409371/1‑93 (MQ=255)
agcagGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATg > 2:3077155/1‑93 (MQ=255)
agcagGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATg < 2:5210387/93‑1 (MQ=255)
gcagGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGt > 1:5064339/1‑93 (MQ=255)
cagGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTc > 2:1782334/1‑93 (MQ=255)
agGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTcc > 2:3402798/1‑93 (MQ=255)
agGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTcc < 2:3836201/93‑1 (MQ=255)
ggCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCg > 2:6359827/1‑93 (MQ=255)
gCTACCATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGc < 1:3478906/93‑1 (MQ=255)
gCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGc > 2:1235273/1‑93 (MQ=255)
cTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCt > 2:6512794/1‑93 (MQ=255)
cTAACATCATCGATATCTGGCCCAGCATCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCt < 2:3529291/93‑1 (MQ=255)
tAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTTTCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTg > 1:2575001/1‑93 (MQ=255)
tAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTg < 2:2865833/93‑1 (MQ=255)
tAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCACGCAGAACAACGGTAACCGTCAGCATGTCCGCTg > 2:3479939/1‑93 (MQ=255)
aaCATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTgg < 1:3731027/93‑1 (MQ=255)
aaCATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTgg > 1:2113753/1‑93 (MQ=255)
aaCATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTgg < 2:2156940/93‑1 (MQ=255)
aCATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGa < 1:398995/93‑1 (MQ=255)
tcatcGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACgg > 2:4396305/1‑93 (MQ=255)
tcGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCAc > 1:4613164/1‑93 (MQ=255)
tcGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCAc > 2:4989160/1‑93 (MQ=255)
cGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACt < 2:1712307/93‑1 (MQ=255)
cGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACt < 1:2244291/93‑1 (MQ=255)
gATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACTg > 2:597282/1‑93 (MQ=255)
atatCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACTGa < 1:3180590/93‑1 (MQ=255)
atatCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACTGa < 2:4650845/93‑1 (MQ=255)
tatCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACTGAc > 1:2532028/1‑93 (MQ=255)
tatCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACTGAc < 1:1893006/93‑1 (MQ=255)
tatCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACTGAc > 2:749458/1‑93 (MQ=255)
||||
GATCAGGTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCCAAGCCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACTGAC > NC_000913/3222863‑3223026
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CAGGTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGC‑‑CAAG‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACTGACT > NC_000913/3222866‑3223027
|
CAGGTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCA > SRR4302547.1219141/1‑94 (MQ=60)
CAGGTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCA > SRR4302547.1562755/1‑94 (MQ=60)
GTGGCGTATTACGGTCGTGGCCCGGGAGAAACCTACGCAAACAGCCCGCAGTCTAACATCATCGATATCTGGCGC‑‑‑‑AGCCCCGTCGAAGCCATGT < SRR4302547.401969/94‑1 (MQ=34)
GTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGT < SRR4302547.5349784/94‑1 (MQ=60)
GTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGT > SRR4302547.6723370/1‑94 (MQ=60)
GTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGT > SRR4302547.2225366/1‑94 (MQ=60)
TGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTT > SRR4302547.1163916/1‑94 (MQ=60)
TGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTT < SRR4302547.632528/94‑1 (MQ=60)
GGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTC < SRR4302547.857256/94‑1 (MQ=60)
CGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGA > SRR4302547.5799272/1‑94 (MQ=60)
GTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAG > SRR4302547.3921625/1‑94 (MQ=60)
ATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAA < SRR4302547.1280417/94‑1 (MQ=60)
TTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAAC < SRR4302547.4847190/94‑1 (MQ=60)
ACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTA > SRR4302547.3561942/1‑94 (MQ=60)
CGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTAT < SRR4302547.5986663/94‑1 (MQ=60)
CGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTAT > SRR4302547.6488063/1‑94 (MQ=60)
CGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTAT > SRR4302547.886228/1‑94 (MQ=60)
GGTCGTGTACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGC‑‑‑‑AGCCCCGTCGATGCCATGTTCGAGAACTATC < SRR4302547.2238765/94‑1 (MQ=60)
GGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATC < SRR4302547.480236/94‑1 (MQ=60)
GGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATC > SRR4302547.2553542/1‑94 (MQ=60)
GGTCGTCGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATC < SRR4302547.4811536/94‑1 (MQ=60)
GTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCC < SRR4302547.4995555/94‑1 (MQ=60)
GTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCC < SRR4302547.6560472/94‑1 (MQ=60)
CGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCT < SRR4302547.4347493/94‑1 (MQ=60)
GTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTT > SRR4302547.3318136/1‑94 (MQ=60)
GTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTT > SRR4302547.415492/1‑94 (MQ=60)
GTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTT > SRR4302547.3963940/1‑94 (MQ=60)
TGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTC < SRR4302547.2689328/94‑1 (MQ=60)
TGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTC < SRR4302547.6651472/94‑1 (MQ=60)
GCCCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCC < SRR4302547.5010448/94‑1 (MQ=60)
GACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCC < SRR4302547.5088837/94‑1 (MQ=60)
GACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCC < SRR4302547.1877855/94‑1 (MQ=60)
ACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCG < SRR4302547.3238942/94‑1 (MQ=60)
ACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCG > SRR4302547.4001781/1‑94 (MQ=60)
ACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCG > SRR4302547.1543196/1‑94 (MQ=60)
CGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGC‑‑‑‑AGCCCCGTCGATGCCATGTTCGAGAACTTTCCCTTCCCGCA < SRR4302547.5182080/94‑1 (MQ=60)
GGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAG > SRR4302547.2880729/1‑94 (MQ=60)
GGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAG < SRR4302547.731487/94‑1 (MQ=60)
GGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAG > SRR4302547.6024079/1‑94 (MQ=60)
GAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACA < SRR4302547.1506023/94‑1 (MQ=60)
GAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACA > SRR4302547.4836435/1‑94 (MQ=60)
GAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACA > SRR4302547.5123762/1‑94 (MQ=60)
GAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACA > SRR4302547.5975620/1‑94 (MQ=60)
AAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAAC < SRR4302547.2242119/94‑1 (MQ=60)
AAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAAC > SRR4302547.5738099/1‑94 (MQ=60)
AAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAAC > SRR4302547.4104736/1‑94 (MQ=60)
AACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACG < SRR4302547.5797044/94‑1 (MQ=60)
AACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACG < SRR4302547.2589614/94‑1 (MQ=60)
AACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACG < SRR4302547.6405131/94‑1 (MQ=60)
ACTACGCCGACAGCCGGCAGGCTAACATCATCGATATCTGGCGC‑‑AACA‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCCCAGAACAAGGG > SRR4302547.861159/1‑94 (MQ=60)
ACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGG > SRR4302547.4758855/1‑94 (MQ=60)
CTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGT > SRR4302547.2463314/1‑94 (MQ=60)
CTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGT < SRR4302547.2072609/94‑1 (MQ=60)
CTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGT > SRR4302547.3743155/1‑94 (MQ=60)
CTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCATTCCCGCAGAACAACGGA > SRR4302547.1460949/1‑94 (MQ=60)
ACGCTGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAA < SRR4302547.6512494/94‑1 (MQ=60)
ACGCCGACAGCCAGCAGGCTAACATCATCGATATCTCGCGCAGCA‑‑‑‑CCGTCGATGGCATGCTCGAGAACTATCCCTTCCCGCAGAACAACGGTAA > SRR4302547.135919/1‑94 (MQ=60)
CGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAAC > SRR4302547.3012249/1‑94 (MQ=60)
CGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAAC > SRR4302547.5840378/1‑94 (MQ=60)
GCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACC > SRR4302547.2742440/1‑94 (MQ=60)
GCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACC < SRR4302547.5098847/94‑1 (MQ=60)
GCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACC < SRR4302547.5537513/94‑1 (MQ=60)
GCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACC > SRR4302547.3580120/1‑94 (MQ=60)
CGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGT > SRR4302547.1861410/1‑94 (MQ=60)
GACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTC < SRR4302547.5443915/94‑1 (MQ=60)
GACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTC > SRR4302547.4851249/1‑94 (MQ=60)
GACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGGAACCGTC > SRR4302547.5933573/1‑94 (MQ=60)
ACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCA < SRR4302547.5510729/94‑1 (MQ=60)
ACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCA > SRR4302547.4379830/1‑94 (MQ=60)
ACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCA < SRR4302547.1368059/94‑1 (MQ=60)
AGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGC < SRR4302547.3023039/94‑1 (MQ=60)
GCCAGCAGGCTAACATCATCGGTATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCA > SRR4302547.5521214/1‑94 (MQ=60)
GCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCA < SRR4302547.5050155/94‑1 (MQ=60)
GCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCA > SRR4302547.5005164/1‑94 (MQ=60)
CAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATG < SRR4302547.3460456/94‑1 (MQ=60)
CAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATG > SRR4302547.4461924/1‑94 (MQ=60)
AGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGT > SRR4302547.5168845/1‑94 (MQ=60)
GCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTC < SRR4302547.4044169/94‑1 (MQ=60)
CAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCAATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCC > SRR4302547.674598/1‑94 (MQ=60)
AGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCG < SRR4302547.920212/94‑1 (MQ=60)
GCTACCATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCT < SRR4302547.3549869/94‑1 (MQ=60)
CTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTTTCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTG > SRR4302547.2626977/1‑94 (MQ=60)
TAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGG > SRR4302547.2155865/1‑94 (MQ=60)
AACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGA < SRR4302547.3807203/94‑1 (MQ=60)
ACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGAC < SRR4302547.406419/94‑1 (MQ=60)
ACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGAC > SRR4302547.667063/1‑94 (MQ=60)
ACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGAC > SRR4302547.490586/1‑94 (MQ=60)
ACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAAATATCGCTTCCAGCAGAACAACGGTAACCGTCAGCATGTTCGCTGGAC > SRR4302547.6285138/1‑94 (MQ=60)
CATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACG > SRR4302547.2449003/1‑94 (MQ=60)
ATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCAC > SRR4302547.4708659/1‑94 (MQ=60)
TCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACT < SRR4302547.2815323/94‑1 (MQ=60)
CGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACTG < SRR4302547.2289567/94‑1 (MQ=60)
CGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACTG < SRR4302547.5386737/94‑1 (MQ=60)
GATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACTGA < SRR4302547.1003361/94‑1 (MQ=60)
GATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCATTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACTGA > SRR4302547.3856274/1‑94 (MQ=60)
ATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACTGAC < SRR4302547.3243979/94‑1 (MQ=60)
ATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACTGAC > SRR4302547.2583201/1‑94 (MQ=60)
ATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACTGAC > SRR4302547.6265199/1‑94 (MQ=60)
TATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACTGACT < SRR4302547.833932/94‑1 (MQ=60)
TATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACTGACT < SRR4302547.1930415/94‑1 (MQ=60)
|
CAGGTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGC‑‑CAAG‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACTGACT > NC_000913/3222866‑3223027
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
