Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I2 R1	593	264.2	13311096	97.8%	13018251	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,256,893	+C	coding (405/423 nt)	yhaQ ←	putative L‑serine dehydratase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,256,891	1	.	C	99.6%	847.3 / ‑5.2	231	D136G (GAC→GGC)	yhaQ	putative L‑serine dehydratase
Reads supporting (aligned to +/- strand): ref base . (0/0); major base C (109/121); minor base A (0/1); total (109/122)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 257 total aligned reads displayed.

GTTTCGACATCGTGCGACAGGCCGAAGTGTTCTTCTTCGACAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGT‑C‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTCTTTGCTACAGGAAAATCAA  >  NC_000913/3256799‑3256978

gTTTCGACATCGTGCGACAGGCCGAAGTGTTCTTCTTCGACAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGt                                                                                           <  1:126308/93‑1 (MQ=255)

gTTTCGACATCGTGCGACAGGCCGAAGTGTTCTTCTTCGACAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGt                                                                                           <  2:3837104/93‑1 (MQ=255)

gTTTCGACATCGTGCGACAGGCCGAAGTGTTCTTCTTCGACAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGt                                                                                           <  1:5322442/93‑1 (MQ=255)

   tCGACATCGTGCGACAGGCCGAAGTGTTCTTCTTCGACAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGT‑cgc                                                                                       <  2:1883885/93‑3 (MQ=255)

   tCGACATCGTGCGACAGCCCGAAGTGTTCTTCTTCGACAATAACCCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGT‑c‑cc                                                                                      <  2:3530945/93‑2 (MQ=255)

    cGACATCGTGCGACAGGCCGAAGTGTTCTTCTTCGACAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGT‑c‑cct                                                                                     >  2:3061487/1‑91 (MQ=255)

      aCATCGTGCGACAGGCCGAAGTGTTCTTCTTCGACAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGT‑c‑ccttc                                                                                   <  2:106621/93‑5 (MQ=255)

         tCGTGCGACAGGCCGAAGTGTTCTTCTTCGACAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAg                                                                                 <  2:146815/93‑1 (MQ=255)

         tCGTGCGACAGGCCGAAGTGTTCTTCTTCGACAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAg                                                                                 >  2:6394485/1‑93 (MQ=255)

         tCGTGCGACAGGCCGAAGTGTTCTTCTTCGACAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAg                                                                                 <  1:4059063/93‑1 (MQ=255)

           gTGCGACAGGCCGAAGTGTTCTTCTTCGACAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGc                                                                               <  1:1588156/93‑1 (MQ=255)

             gCGACAGGCCGAAGTGTTCTTCTTCGACAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAg                                                                             >  2:4832744/1‑93 (MQ=255)

               gACAGGCCGAAGTGTTCTTCTTCGACAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTg                                                                           >  1:493552/1‑93 (MQ=255)

               gACAGGCCGAAGTGTTCTTCTTCGACAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTg                                                                           >  2:2683687/1‑93 (MQ=255)

               gACAGGCCGAAGTGTTCTTCTTCGACAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTg                                                                           >  1:42442/1‑93 (MQ=255)

               gACAGGCCGAAGTGTTCTTCTTCGACAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTg                                                                           >  1:195689/1‑93 (MQ=255)

                aCAGGCCGAAGTGTTCTTCTTCGACAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGa                                                                          >  1:129619/1‑93 (MQ=255)

                       gAAGTGTTCTTCTTCGACAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCAt                                                                   >  2:1175541/1‑93 (MQ=255)

                       gAAGTGTTCTTCTTCGACAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCAt                                                                   >  2:5230293/1‑93 (MQ=255)

                         aGTGTTCTTCTTCGACAATAACCCCGCCTCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTc                                                                 <  2:3801323/93‑1 (MQ=255)

                         aGTGTTCTTCTTCGACAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTc                                                                 >  2:3431931/1‑93 (MQ=255)

                         aGTGTTCTTCTTCGACAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTc                                                                 <  1:2149708/93‑1 (MQ=255)

                         aGTGTTCTTCTTCGACAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTc                                                                 <  1:223638/93‑1 (MQ=255)

                           tgtTCTTCTTCGACAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCg                                                               >  2:4207298/1‑93 (MQ=255)

                            gtTCTTCTTCGACAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGt                                                              >  2:2726016/1‑93 (MQ=255)

                            gtTCTTCTTCGACAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGt                                                              <  1:47760/93‑1 (MQ=255)

                            gtTCTTCTTCGACAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGt                                                              <  1:6334312/93‑1 (MQ=255)

                             ttcttcttcGACAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGtt                                                             >  1:4192201/1‑93 (MQ=255)

                             ttcttcttcGACAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGtt                                                             <  2:1031711/93‑1 (MQ=255)

                              tcttcttcGACAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTtc                                                            <  2:1943342/93‑1 (MQ=255)

                              tcttcttcGACAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTtc                                                            <  2:5724384/93‑1 (MQ=255)

                               cttcttcGACAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTtct                                                           <  1:444380/93‑1 (MQ=255)

                                ttcttcGACAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTtctc                                                          >  2:3817353/1‑93 (MQ=255)

                                 tcttcGACAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCa                                                         >  2:5929275/1‑93 (MQ=255)

                                 tcttcGACAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCa                                                         <  2:1822717/93‑1 (MQ=255)

                                 tcttcGACAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCa                                                         <  2:3783547/93‑1 (MQ=255)

                                 tcttcGACAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCa                                                         >  2:803319/1‑93 (MQ=255)

                                  cttcGACAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCAt                                                        <  1:4870144/93‑1 (MQ=255)

                                   ttcGACAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATg                                                       <  2:4051208/93‑1 (MQ=255)

                                    tcGACAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATgg                                                      <  2:5607382/93‑1 (MQ=255)

                                        cAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAg                                                  <  2:6122886/93‑1 (MQ=255)

                                              aCCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGc                                                     >  2:1221953/1‑84 (MQ=255)

                                               cccGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACAt                                           <  1:920953/93‑1 (MQ=255)

                                                ccgccgccgACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACAtt                                          >  2:4637726/1‑93 (MQ=255)

                                                ccgccgccgACAGAGCAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACAtt                                          >  1:2715864/1‑93 (MQ=255)

                                                 cgccgccgACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACAttt                                         <  2:2045115/93‑1 (MQ=255)

                                                 cgccgccgACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACAttt                                         <  1:1866424/93‑1 (MQ=255)

                                                 cgccgccgACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACAttt                                         >  2:5839130/1‑93 (MQ=255)

                                                 cgccgccgACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACAttt                                         >  1:5617985/1‑93 (MQ=255)

                                                  gccgccgACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTc                                        >  1:5116982/1‑93 (MQ=255)

                                                  gccgccgACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTc                                        >  1:5230660/1‑93 (MQ=255)

                                                   ccgccgACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCg                                       >  2:2939025/1‑93 (MQ=255)

                                                   ccgccgACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCg                                       >  2:2461950/1‑93 (MQ=255)

                                                    cgccgACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCgg                                      >  1:6156462/1‑93 (MQ=255)

                                                     gccgACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCggg                                     <  2:2230558/93‑1 (MQ=255)

                                                        gACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATg                                  >  2:6640452/1‑93 (MQ=255)

                                                         aCAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTTCGTTCTCATGGCGAGGCAACATTTCGGGATgg                                 <  1:658089/93‑1 (MQ=255)

                                                         aCAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATgg                                 >  2:5693532/1‑93 (MQ=255)

                                                         aCAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATgg                                 <  2:5432066/93‑1 (MQ=255)

                                                          cAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGa                                <  2:6529831/93‑1 (MQ=255)

                                                          cAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGa                                >  2:3625818/1‑93 (MQ=255)

                                                          cAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTGCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGa                                <  2:1721785/93‑1 (MQ=255)

                                                           agagTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGaa                               <  1:111766/93‑1 (MQ=255)

                                                           agagTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGaa                               <  2:5335872/93‑1 (MQ=255)

                                                           agagTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGaa                               <  1:2529336/93‑1 (MQ=255)

                                                           agagTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTACCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGaa                               <  1:3112687/93‑1 (MQ=255)

                                                            gagTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAg                              <  2:328209/93‑1 (MQ=255)

                                                              gTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGAt                            >  2:2587629/1‑93 (MQ=255)

                                                               tAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATa                           >  1:6099141/1‑93 (MQ=255)

                                                               tAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATa                           >  1:4643352/1‑93 (MQ=255)

                                                                aaTAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATaa                          <  2:917570/93‑1 (MQ=255)

                                                                aaTAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATaa                          <  1:1703844/93‑1 (MQ=255)

                                                                aaTAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATCCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATaa                          <  1:2115835/93‑1 (MQ=255)

                                                                 aTAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGGAGATAAt                         >  1:5952038/1‑93 (MQ=255)

                                                                 aTAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAAt                         >  2:5627897/1‑93 (MQ=255)

                                                                  tAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATg                        >  1:1058109/1‑93 (MQ=255)

                                                                  tAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATg                        <  2:2268384/93‑1 (MQ=255)

                                                                     gTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTc                     <  1:1383916/93‑1 (MQ=255)

                                                                     gTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTc                     <  1:3097081/93‑1 (MQ=255)

                                                                     gTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTc                     >  1:4520729/1‑93 (MQ=255)

                                                                       tttACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTCtt                   <  1:1421989/93‑1 (MQ=255)

                                                                       tttACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTCtt                   <  1:2363491/93‑1 (MQ=255)

                                                                       tttACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTCtt                   >  2:4328902/1‑93 (MQ=255)

                                                                        ttACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTCttt                  <  1:5178029/93‑1 (MQ=255)

                                                                          aCTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTCTTTGc                <  1:5453190/93‑1 (MQ=255)

                                                                           cTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTCTTTGCt               >  1:3606566/1‑93 (MQ=255)

                                                                              aaTAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTCTTTGCTACa            <  2:244483/93‑1 (MQ=255)

                                                                               aTAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTCTTTGCTACAg           <  2:3229426/93‑1 (MQ=255)

                                                                                tAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTCTTTGCTACAgg          >  1:2934478/1‑93 (MQ=255)

                                                                                 aGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTCTTTGCTACAGGa         <  2:110377/93‑1 (MQ=255)

                                                                                 aGCTCTGCCTGT‑CTCTTCCAGGCAGTGATCCGCATTCCGTTCTCAGGGCGAGGCGACATTTCGGGATGGAAGATAATGTTCTTTGCTACAGGa         <  1:2950630/93‑1 (MQ=255)

                                                                                  gCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTCTTTGCTACAGGaa        >  2:4511334/1‑93 (MQ=255)

                                                                                  gCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTCTTTGCTACAGGaa        <  2:1568708/93‑1 (MQ=255)

                                                                                    tctTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTCTTTGCTACAGGtaaa      >  1:906087/1‑93 (MQ=255)

                                                                                    tctTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTCTTTGCTACAGGaaaa      >  1:867659/1‑93 (MQ=255)

                                                                                     ctTCCTGTCC‑CTTCCAGGCAGTGATCTGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATAGAAGATAATGTTCTTTGCTACAGGAAAAt     <  1:5851082/93‑1 (MQ=255)

                                                                                      ttCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTCTTTGCTACAGGAAAATc    >  1:4687312/1‑93 (MQ=255)

                                                                                      ttCCTGTCC‑CTTCCAGGCAGTGATCCGCATGCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTCTTTGCTACAGGAAAATc    <  2:3350137/93‑1 (MQ=255)

                                                                                       tCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTCTTTGCTACAGGAAAATca   <  1:3875599/93‑1 (MQ=255)

                                                                                        ccTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTCTTTGCTACAGGAAAATcaa  <  1:6612963/93‑1 (MQ=255)

GTTTCGACATCGTGCGACAGGCCGAAGTGTTCTTCTTCGACAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGT‑C‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTCTTTGCTACAGGAAAATCAA  >  NC_000913/3256799‑3256978

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

TTCGACATCGTGCGACAGGCCGAAGTGTTCTTCTTCGACAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGT‑C‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTCTTTGCTACAGGAAAATCAACAATATGC  >  NC_000913/3256801‑3256986

TTCGACATCGTGCGACAGGCCGAAGTGTTCTTCTTCGACAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGT‑C‑CC                                                                                              >  SRR4302547.6251670/1‑94 (MQ=60)

 TCGACATCGTGCGACAGGCCGAAGTGTTCTTCTTCGACAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGT‑C‑CCT                                                                                             <  SRR4302547.2515943/94‑1 (MQ=60)

  CGACATCGTGCGACAGGCCGAAGTGTTCTTCTTCGACAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGT‑C‑Cctt                                                                                            <  SRR4302547.2952892/94‑4 (MQ=60)

   GACATCGTGCGACAGGCCGAAGTGTTCTTCTTCGACAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTC                                                                                            >  SRR4302547.3173052/1‑94 (MQ=60)

   GACATCGTGCGACAGGCCGAAGTGTTCTTCTTCGACAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTC                                                                                            <  SRR4302547.6124449/94‑1 (MQ=60)

    ACATCGTGCGACAGGCCGAAGTGTTCTTCTTCGACAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCC                                                                                           >  SRR4302547.5548785/1‑94 (MQ=60)

     CATCGTGCGACAGGCCGAAGTGTTCTTCTTCGACAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCA                                                                                          <  SRR4302547.121136/94‑1 (MQ=60)

      ATCGTGCGACAGGCCCAAGTGTTCTTCTTCGACAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAG                                                                                         >  SRR4302547.4136042/1‑94 (MQ=60)

       TCGTGCGACAGGCCGAAGTGTTCTTCTTCGACAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGG                                                                                        <  SRR4302547.4141497/94‑1 (MQ=60)

        CGTGCGACAGGCCGAAGTGTTCTTCTTCGACAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGC                                                                                       <  SRR4302547.1822740/94‑1 (MQ=60)

         GTGCGACAGGCCGAAGTGTTCTTCTTCGACAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCA                                                                                      <  SRR4302547.1619717/94‑1 (MQ=60)

          TGCGACAGGCCGAAGTGTTCTTCTTCGACAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAG                                                                                     <  SRR4302547.1825596/94‑1 (MQ=60)

           GCGACAGGCCGAAGTGTTCTTCTTCGACAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGT                                                                                    >  SRR4302547.1557531/1‑94 (MQ=60)

            CGACAGGCCGAAGTGTTCTTCTTCGACAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTG                                                                                   >  SRR4302547.502562/1‑94 (MQ=60)

            CGACAGGCCGAAGTGTTCTTCTTCGACAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTG                                                                                   >  SRR4302547.199344/1‑94 (MQ=60)

            CGACAGGCCGAAGTGTTCTTCTTCGACAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTG                                                                                   >  SRR4302547.43221/1‑94 (MQ=60)

             GACAGGCCGAAGTGTTCTTCTTCGACAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGA                                                                                  >  SRR4302547.131958/1‑94 (MQ=60)

             GACAGGCCGAAGTGTTCTTCTTCGACAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGA                                                                                  >  SRR4302547.2176510/1‑94 (MQ=60)

                AGGCCGAAGTGTTCTTCTTCGACAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCC                                                                               >  SRR4302547.2117941/1‑94 (MQ=60)

                 GGCCGAAGTGTTCTTCTTCGACAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCG                                                                              >  SRR4302547.5979786/1‑94 (MQ=60)

                    CGAAGTGTTCTTCTTCGACAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCAT                                                                           >  SRR4302547.969968/1‑94 (MQ=60)

                    CGAAGTGTTCTTCTTCGACAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCAT                                                                           >  SRR4302547.6721130/1‑94 (MQ=60)

                    CGAAGTGTTCTTCTTCGACAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCAT                                                                           >  SRR4302547.1969416/1‑94 (MQ=60)

                    CGAAGTGTTCTTCTTCGACAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCAT                                                                           >  SRR4302547.1952740/1‑94 (MQ=60)

                       AGTGTTCTTCTTCGACAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCC                                                                        <  SRR4302547.2192610/94‑1 (MQ=60)

                       AGTGTTCTTCTTCGACAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCC                                                                        <  SRR4302547.227850/94‑1 (MQ=60)

                        GTGTTCTTCTTCGACAATAACCCAGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCG                                                                       <  SRR4302547.2934420/94‑1 (MQ=60)

                         TGTTCTTCTTCGACAATAACCCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGT                                                                      <  SRR4302547.1237023/94‑1 (MQ=60)

                         TGTTCTTCTTCGACAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGT                                                                      >  SRR4302547.5985927/1‑94 (MQ=60)

                         TGTTCTTCTTCGACAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGT                                                                      <  SRR4302547.884503/94‑1 (MQ=60)

                         TGTTCTTCTTCGACAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGT                                                                      >  SRR4302547.342304/1‑94 (MQ=60)

                          GTTCTTCTTCGACAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTT                                                                     >  SRR4302547.4277699/1‑94 (MQ=60)

                          GTTCTTCTTCGACAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTT                                                                     <  SRR4302547.48646/94‑1 (MQ=60)

                          GTTCTTCTTCGACAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTT                                                                     <  SRR4302547.6466202/94‑1 (MQ=60)

                           TTCTTCTTCGACAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTC                                                                    <  SRR4302547.5547928/94‑1 (MQ=60)

                            TCTTCTTCGACAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCT                                                                   <  SRR4302547.5258578/94‑1 (MQ=60)

                             CTTCTTCGACAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTC                                                                  <  SRR4302547.452656/94‑1 (MQ=60)

                             CTTCTTCGACAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTC                                                                  <  SRR4302547.4823223/94‑1 (MQ=60)

                               TCTTCGACAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCAT                                                                >  SRR4302547.6497504/1‑94 (MQ=60)

                                CTTCGACAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATG                                                               <  SRR4302547.4971064/94‑1 (MQ=60)

                                 TTCGACAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGG                                                              <  SRR4302547.98196/94‑1 (MQ=60)

                                   ttgacattAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCG                                                            <  SRR4302547.1246608/86‑1 (MQ=60)

                                   CGACAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCG                                                            <  SRR4302547.2872956/94‑1 (MQ=60)

                                     ACAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAG                                                          <  SRR4302547.149221/94‑1 (MQ=60)

                                      CAATAACCCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGG                                                         <  SRR4302547.571469/94‑1 (MQ=60)

                                      CAAGAACCCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTACCTGTCC‑CTGCCAGGCAGCGATCCGCATTCCGTTCTCATGGCGAGG                                                         <  SRR4302547.100298/94‑1 (MQ=60)

                                        ATAACCCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCA                                                       <  SRR4302547.3662786/94‑1 (MQ=60)

                                        ATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCA                                                       <  SRR4302547.4809685/94‑1 (MQ=60)

                                         TAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAA                                                      <  SRR4302547.1328608/94‑1 (MQ=60)

                                         TAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAA                                                      >  SRR4302547.4947001/1‑94 (MQ=60)

                                           AACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACA                                                    >  SRR4302547.4509083/1‑94 (MQ=60)

                                           AACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACA                                                    <  SRR4302547.2362438/94‑1 (MQ=60)

                                            ACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACAT                                                   <  SRR4302547.3983191/94‑1 (MQ=60)

                                            ACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACAT                                                   <  SRR4302547.930345/94‑1 (MQ=60)

                                             CCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATT                                                  <  SRR4302547.938740/94‑1 (MQ=60)

                                             CCCGCCGCCGACAGAGCAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATT                                                  >  SRR4302547.2770383/1‑94 (MQ=60)

                                              CCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTT                                                 >  SRR4302547.5733925/1‑94 (MQ=60)

                                              CCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTT                                                 <  SRR4302547.773339/94‑1 (MQ=60)

                                               CGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTC                                                <  SRR4302547.1903282/94‑1 (MQ=60)

                                               CGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTC                                                >  SRR4302547.5222418/1‑94 (MQ=60)

                                               CGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTC                                                >  SRR4302547.5338332/1‑94 (MQ=60)

                                               CGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTC                                                <  SRR4302547.1100962/94‑1 (MQ=60)

                                                 CCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGG                                              >  SRR4302547.6284229/1‑94 (MQ=60)

                                                 CCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGG                                              <  SRR4302547.4400397/94‑1 (MQ=60)

                                                  CGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGG                                             <  SRR4302547.1441110/94‑1 (MQ=60)

                                                   GCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGA                                            <  SRR4302547.4908702/94‑1 (MQ=60)

                                                   GCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGA                                            <  SRR4302547.3030118/94‑1 (MQ=60)

                                                    CCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGAT                                           <  SRR4302547.5309950/94‑1 (MQ=60)

                                                     CGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATG                                          >  SRR4302547.4711577/1‑94 (MQ=60)

                                                     CGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATG                                          <  SRR4302547.6681449/94‑1 (MQ=60)

                                                      GACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGG                                         <  SRR4302547.5041177/94‑1 (MQ=60)

                                                      GACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGG                                         >  SRR4302547.2380050/1‑94 (MQ=60)

                                                       ACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTTCGTTCTCATGGCGAGGCAACATTTCGGGATGGA                                        <  SRR4302547.670208/94‑1 (MQ=60)

                                                       ACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGA                                        <  SRR4302547.3722611/94‑1 (MQ=60)

                                                        CAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAA                                       >  SRR4302547.4586666/1‑94 (MQ=60)

                                                         AGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAG                                      <  SRR4302547.2580454/94‑1 (MQ=60)

                                                         AGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAG                                      <  SRR4302547.113802/94‑1 (MQ=60)

                                                         AGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAG                                      <  SRR4302547.4672931/94‑1 (MQ=60)

                                                         AGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAG                                      <  SRR4302547.1679313/94‑1 (MQ=60)

                                                         AGAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTACCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAG                                      <  SRR4302547.3174376/94‑1 (MQ=60)

                                                          GAGTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGA                                     >  SRR4302547.5819452/1‑94 (MQ=60)

                                                            GTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATA                                   >  SRR4302547.6225659/1‑94 (MQ=60)

                                                            GTAATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATA                                   >  SRR4302547.4739520/1‑94 (MQ=60)

                                                              AATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGGAGATAAT                                 >  SRR4302547.6075469/1‑94 (MQ=60)

                                                              AATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAAT                                 <  SRR4302547.1737356/94‑1 (MQ=60)

                                                              AATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAAT                                 <  SRR4302547.4754904/94‑1 (MQ=60)

                                                              AATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATCCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAAT                                 <  SRR4302547.2157994/94‑1 (MQ=60)

                                                               ATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCATCATTTCGGGATGGAAGATAATG                                <  SRR4302547.426499/94‑1 (MQ=60)

                                                               ATAGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATG                                >  SRR4302547.1079148/1‑94 (MQ=60)

                                                                 agtttttgcgTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGTAAGATAATGTT                              <  SRR4302547.2732822/84‑1 (MQ=60)

                                                                 AGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTT                              >  SRR4302547.6738696/1‑94 (MQ=60)

                                                                 AGGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTT                              <  SRR4302547.909494/94‑1 (MQ=60)

                                                                  GGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTC                             >  SRR4302547.4614133/1‑94 (MQ=60)

                                                                  GGTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTC                             >  SRR4302547.626404/1‑94 (MQ=60)

                                                                   GTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTCT                            <  SRR4302547.1411631/94‑1 (MQ=60)

                                                                   GTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTCT                            <  SRR4302547.3158450/94‑1 (MQ=60)

                                                                   GTTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTCT                            <  SRR4302547.3043172/94‑1 (MQ=60)

                                                                    TTTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTCTT                           <  SRR4302547.5160304/94‑1 (MQ=60)

                                                                     TTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTCTTT                          <  SRR4302547.1450464/94‑1 (MQ=60)

                                                                     TTTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTCTTT                          <  SRR4302547.2411404/94‑1 (MQ=60)

                                                                      TTACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTCTTTG                         <  SRR4302547.5284614/94‑1 (MQ=60)

                                                                        ACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTCTTTGCT                       >  SRR4302547.3680116/1‑94 (MQ=60)

                                                                        ACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTCTTTGCT                       <  SRR4302547.5565876/94‑1 (MQ=60)

                                                                        ACTTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTCTTTGCT                       <  SRR4302547.1296329/94‑1 (MQ=60)

                                                                          TTAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTCTTTGCTAC                     >  SRR4302547.5360030/1‑94 (MQ=60)

                                                                           TAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTCTTTGCTACA                    >  SRR4302547.2728816/1‑94 (MQ=60)

                                                                           TAATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTCTTTGCTACA                    >  SRR4302547.5455449/1‑94 (MQ=60)

                                                                             ATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTCTTTGCTACAGG                  >  SRR4302547.2992954/1‑94 (MQ=60)

                                                                             ATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTCTTTGCTACAGG                  >  SRR4302547.4199717/1‑94 (MQ=60)

                                                                             ATAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTCTTTGCTACAGG                  <  SRR4302547.4301742/94‑1 (MQ=60)

                                                                              TAGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTCTTTGCTACAGGA                 <  SRR4302547.2174864/94‑1 (MQ=60)

                                                                               AGCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTCTTTGCTACAGGAA                >  SRR4302547.5606401/1‑94 (MQ=60)

                                                                               AGCTCTGCCTGT‑CTCTTCCAGGCAGTGATCCGCATTCCGTTCTCAGGGCGAGGCGACATTTCGGGATGGAAGATAATGTTCTTTGCTACAGGAA                <  SRR4302547.3009379/94‑1 (MQ=60)

                                                                                GCTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTCTTTGCTACAGGAAA               <  SRR4302547.528463/94‑1 (MQ=60)

                                                                                 CTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTCTTTGCTACAGGTAAA              >  SRR4302547.923548/1‑94 (MQ=60)

                                                                                 CTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTCTTTGCTACAGGAAAA              >  SRR4302547.6325369/1‑94 (MQ=60)

                                                                                 CTCTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTCTTTGCTACAGGAAAA              >  SRR4302547.884265/1‑94 (MQ=60)

                                                                                   CTTCCTGTCC‑CTTCCAGGCAGTGATCTGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATAGAAGATAATGTTCTTTGCTACAGGAAAATC            <  SRR4302547.5972117/94‑1 (MQ=60)

                                                                                   CTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTCTTTGCTACAGGACAATC            >  SRR4302547.3002702/1‑94 (MQ=60)

                                                                                   CTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTCTTTGCTACAGGAAAATC            >  SRR4302547.2267067/1‑94 (MQ=60)

                                                                                   CTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTCTTTGCTACAGGAAAATC            >  SRR4302547.4784395/1‑94 (MQ=60)

                                                                                   CTTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTCTTTGCTACAGGAAAATA            >  SRR4302547.1373201/1‑94 (MQ=60)

                                                                                    TTCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTCTTTGCTACAGGAAAATCA           >  SRR4302547.5026706/1‑94 (MQ=60)

                                                                                     TCCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTCTTTGCTACAGGAAAATCAA          <  SRR4302547.3954455/94‑1 (MQ=60)

                                                                                      CCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTCTTTGCTACCGGAAAATCAta         >  SRR4302547.2916419/1‑92 (MQ=60)

                                                                                      CCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTCTTTGCTACAGGAAAATCAAC         >  SRR4302547.3964945/1‑94 (MQ=60)

                                                                                      CCTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTCTTTGCTACAGGAAAATCAAC         <  SRR4302547.6750610/94‑1 (MQ=60)

                                                                                       CTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTCTTTGCTACAGGAAAATCAACA        >  SRR4302547.5656271/1‑94 (MQ=60)

                                                                                       CTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTCTTTGCTACAGGAAAATCAACA        <  SRR4302547.185218/94‑1 (MQ=60)

                                                                                       CTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTCTTTGCTACAGGAAAATCAACA        >  SRR4302547.5884863/1‑94 (MQ=60)

                                                                                       CTGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTCTTTGCTACAGGAAAATCAACA        >  SRR4302547.1466531/1‑94 (MQ=60)

                                                                                        TGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTCTTTGCTACAGGAAAATCAACAA       >  SRR4302547.835832/1‑94 (MQ=60)

                                                                                        TGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTCTTTGCTACAGGAAAATCAACAA       >  SRR4302547.1151381/1‑94 (MQ=60)

                                                                                        TGTCC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTCTTTGCTACACGGAAATCAACAA       >  SRR4302547.5866524/1‑94 (MQ=60)

                                                                                         gtcC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTCTTTGCTACAGGAAAATCAACAAT      >  SRR4302547.6599343/4‑94 (MQ=60)

                                                                                          tcC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTCTTTGCTACAGGAAAATCAACAATA     >  SRR4302547.276504/3‑94 (MQ=60)

                                                                                          tcC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTCTTTGCTACAGGAAAATCAACAATA     <  SRR4302547.2726451/92‑1 (MQ=60)

                                                                                          tcC‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTCTTTGCTACAGGAAAATCAACAATA     <  SRR4302547.2498542/92‑1 (MQ=60)

                                                                                          C‑C‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTCTTTGCTACAGGAAAATCAACAATAT    >  SRR4302547.6714787/1‑94 (MQ=60)

                                                                                          C‑C‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTCTTTGCTACAGGAAAATCAACAATAT    <  SRR4302547.673808/94‑1 (MQ=60)

                                                                                          C‑C‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTCTTTGCTACAGGAAAATCAACAATAT    >  SRR4302547.487897/1‑94 (MQ=60)

                                                                                          C‑C‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTCTTTGCTACAGGAAAATCAACAATAT    <  SRR4302547.2961810/94‑1 (MQ=60)

                                                                                          C‑C‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTCTTTGCTACAGGAAAATCAACAATAT    >  SRR4302547.1351446/1‑94 (MQ=60)

                                                                                          C‑C‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTCTTTGCTACAGGAAAATCAACAATAT    >  SRR4302547.5815172/1‑94 (MQ=60)

                                                                                          C‑C‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTCTTTGCTACAGGAAAATCAACAATAT    >  SRR4302547.1062048/1‑94 (MQ=60)

                                                                                              CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTCTTTGCTACAGGAAAATCAACAATATGC  >  SRR4302547.4806974/1‑94 (MQ=60)

                                                                                              CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTCTTTGCTACAGGAAAATCAACAATATGC  >  SRR4302547.6435907/1‑94 (MQ=60)

                                                                                              CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTCTTTGCTACAGGAAAATCAACAATATGC  >  SRR4302547.5389741/1‑94 (MQ=60)

                                                                                              CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTCTTTGCTACAGGAAAATCAACAATATGC  <  SRR4302547.2329926/94‑1 (MQ=60)

                                                                                              CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTCTTTGCTACAGGAAAATCAACAATATGC  >  SRR4302547.6100065/1‑94 (MQ=60)

                                                                                              CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTCTTTGCTACAGGAAAATCAACAATATGC  <  SRR4302547.5132011/94‑1 (MQ=60)

                                                                                              CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTCTTTGCTACAGGAAAATCAACAATATGC  <  SRR4302547.5586826/94‑1 (MQ=60)

                                                                                              CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTCTTTGCTACAGGAAAATCAACAATATGC  >  SRR4302547.3133550/1‑94 (MQ=60)

TTCGACATCGTGCGACAGGCCGAAGTGTTCTTCTTCGACAATAAACCCGCCGCCGACAGAGTAATAGGTTTTACTTAATAGCTCTTCCTGT‑C‑CTTCCAGGCAGTGATCCGCATTCCGTTCTCATGGCGAGGCAACATTTCGGGATGGAAGATAATGTTCTTTGCTACAGGAAAATCAACAATATGC  >  NC_000913/3256801‑3256986

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 10 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`