Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
593 |
264.2 |
13311096 |
97.8% |
13018251 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,295,019 |
T→C |
D254G (GAT→GGT) |
yraQ ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,295,019 | 0 | T | C | 82.3%
| 492.6
/ 104.1
| 215 | D254G (GAT→GGT) | yraQ | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (20/18); new base C (89/88); total (109/106) |
| Fisher's exact test for biased strand distribution p-value = 8.59e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.96e-01 |
Only 100 of 223 total aligned reads displayed.
CAATCGGAATTTCTGCTGCCGTGGGAATGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCATCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGATGTAAACCGGGATCGTACTCCAGAAAAGCGTCCATA > NC_000913/3294927‑3295109
|
cAATCGGAATTTCTGCTGCCGTGGGAATGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCAt < 1:5988603/93‑1 (MQ=255)
aTCGGAATTTCTGCTGCCGTGGGAATGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCATCg < 2:2958925/93‑1 (MQ=255)
aTCGGAATTTCTGCTGCCGTGGGAATGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCg > 1:3396346/1‑93 (MQ=255)
aTCGGAATTTCTGCTGCCGTGGGAATGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCg < 2:4801546/93‑1 (MQ=255)
gAATTTCTGCTGCCGTTGGAATGACAAACAAGCATCCTGCTAGCGCCATCGCCACCACCCACATCAGTCTGTTATCGACAGCACCACCGGCAt > 1:3628859/1‑93 (MQ=255)
gAATTTCTGCTGCCGTGGGAATGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCAt > 1:5621816/1‑93 (MQ=255)
tttCTGCTGCCGTGGGAATGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATggg < 1:1775323/93‑1 (MQ=255)
tCTGCTGCCGTGGGAATGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATggggg < 1:105206/93‑1 (MQ=255)
tgctgcCGTGGGAATGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGaa < 2:192422/93‑1 (MQ=255)
tgctgcCGTGGGAATGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGaa > 2:1555031/1‑93 (MQ=255)
gctgcCGTGGGAATGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAAt > 2:1622885/1‑93 (MQ=255)
ctgcCGTGGGAATGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATa > 1:2210247/1‑93 (MQ=255)
ctgcCGTGGGAATGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATa > 2:2697531/1‑93 (MQ=255)
gcCGTGGGAATGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCATCGGCATGGGGGCATAAc > 2:6189636/1‑93 (MQ=255)
ccGTGGGAATGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAAcc > 2:2281593/1‑93 (MQ=255)
ccGTGGGAATGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAAcc < 1:2914229/93‑1 (MQ=255)
cGTGGGAATGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAAccg > 1:6316693/1‑92 (MQ=255)
gTGGGAATGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCATCGGCATGGGGGAATAAACAg > 2:3941055/1‑93 (MQ=255)
gTGGGAATGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAg < 2:2593988/93‑1 (MQ=255)
gTGGGAATGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAg < 1:6574239/93‑1 (MQ=255)
tGGGAATGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGa > 1:1714438/1‑93 (MQ=255)
gggAATGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCATCGGCATGGGGGAATAACCAGAc < 1:2157180/93‑1 (MQ=255)
gggAATGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGAc > 2:719641/1‑93 (MQ=255)
ggAATGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGAcg > 1:6603705/1‑93 (MQ=255)
gAATGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGAcgc < 2:3530180/93‑1 (MQ=255)
aaTGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGAcgcg > 2:4347117/1‑93 (MQ=255)
aaTGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGAcgcg < 2:696120/93‑1 (MQ=255)
aTGACAAACAAGCATCCTGCTTCCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGa < 1:5267227/93‑1 (MQ=255)
aTGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGa < 2:595038/93‑1 (MQ=255)
aTGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGa < 1:1181881/93‑1 (MQ=255)
tGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAg < 1:1239297/93‑1 (MQ=255)
tGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAg < 1:3778439/93‑1 (MQ=255)
tacaaacaaGCATCGTGCTACCGCCATCGCCACCACCCACATCAGGCTGGTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGc < 2:1399319/92‑1 (MQ=255)
acaaacaaGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCg > 1:2021289/1‑93 (MQ=255)
aaacaaGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGc > 1:4785741/1‑93 (MQ=255)
aacaaGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCATCGGCATGGGGGAATAACCAGACGCGAGCGGCa > 1:5823816/1‑93 (MQ=255)
aacaaGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCa > 2:3149636/1‑93 (MQ=255)
aaGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCAccc < 2:1661742/93‑1 (MQ=255)
tCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGATAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAacac > 1:452852/1‑93 (MQ=255)
tCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAacac > 2:5308130/1‑93 (MQ=255)
ccTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACAcc < 2:1787979/93‑1 (MQ=255)
cTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCATCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCa < 2:3699530/93‑1 (MQ=255)
cTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGCCGCGAGCGGCACCCAACACCa < 2:3671758/93‑1 (MQ=255)
cTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCa < 1:1603218/93‑1 (MQ=255)
cTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCa > 2:2834539/1‑93 (MQ=255)
gCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGt > 2:1072359/1‑93 (MQ=255)
gCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGt > 1:1578527/1‑93 (MQ=255)
cTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTa < 1:675734/93‑1 (MQ=255)
aCCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCATCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACt > 2:5205412/1‑93 (MQ=255)
aCCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCATCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACt > 2:1224172/1‑93 (MQ=255)
ccGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTg > 2:4425991/1‑93 (MQ=255)
ccGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTg < 1:749255/93‑1 (MQ=255)
cGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCATCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGc > 1:2993010/1‑93 (MQ=255)
cGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCATCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGc < 2:4733807/93‑1 (MQ=255)
cGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGc > 1:35604/1‑93 (MQ=255)
cGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGc < 1:1469076/93‑1 (MQ=255)
cccATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGAAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCa < 1:3695679/92‑1 (MQ=255)
ccATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCaa > 1:455309/1‑93 (MQ=255)
ccATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCaa < 2:5843520/93‑1 (MQ=255)
cATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAg < 1:6100020/93‑1 (MQ=255)
cATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAg > 1:2357105/1‑93 (MQ=255)
cATCGCCACCACCCACATCAGGCTGTTATCGACAGCACAACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAg > 1:2857110/1‑93 (MQ=255)
aTCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAgg < 1:5075767/93‑1 (MQ=255)
tCGCCACCACCCACATCAGGCTGTTATCGACAGCACCATCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGa < 2:507487/93‑1 (MQ=255)
tCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGa < 2:2237019/93‑1 (MQ=255)
gCCACCACCCACATCAGGCTGTTATCGACAGCACCATCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGATg > 1:1084939/1‑93 (MQ=255)
cccccacccacATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGATGt < 2:4046380/90‑1 (MQ=255)
ccaccaCCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGATGt < 1:189716/93‑1 (MQ=255)
ccaccaCCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGATGt > 1:5923378/1‑93 (MQ=255)
caccacCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGATGTa > 2:4171652/1‑93 (MQ=255)
accaccCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGATGTaa > 1:5397272/1‑93 (MQ=255)
cacccacATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGATGTAAAc > 2:4477674/1‑93 (MQ=255)
cacccacATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGATGTAAAc < 2:5596029/93‑1 (MQ=255)
cccacATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGATGTAAACCg > 2:1996681/1‑93 (MQ=255)
cccacATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGATGTAAACCg > 1:944699/1‑93 (MQ=255)
cacacaTCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGATGTAACCCg < 1:5724013/91‑1 (MQ=255)
ccacATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGATGTAAACCgg > 2:4384865/1‑93 (MQ=255)
acaTCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGATGTAAACCGGGa > 2:3368891/1‑93 (MQ=255)
acaTCAGACTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACCCCAGGACTGCAAGGATGTAAACCgggg > 1:3841842/1‑92 (MQ=255)
caTCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGATGTAAACCGGGAt < 2:6483864/93‑1 (MQ=255)
caTCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGATGTAAACCGGGAt < 1:3455306/93‑1 (MQ=255)
caTCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGATGTAAACCGGGAt < 1:5376170/93‑1 (MQ=255)
tCAGGCTGTTATCGACAGCACCATCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGATGTAAACCGGGATCg < 1:2745912/93‑1 (MQ=255)
aGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGATGTAAACCGGGATCGTa > 1:5033505/1‑93 (MQ=255)
ggCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGATGTAAACCGGGATCGTAc < 1:3283434/93‑1 (MQ=255)
tGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACAAGTACTGCAAGGATGTACACCGGGATCGTATTcc > 1:2282339/1‑93 (MQ=255)
gTTATCGACAGCACCATCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGATGTAAACCGGGATCGTACTCCa > 1:4338295/1‑93 (MQ=255)
tATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGATGTAAACCGGGATCGTACTCCAGa > 2:5769892/1‑93 (MQ=255)
tATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGATGTAAACCGGGATCGTACTCCAGa < 1:3677193/93‑1 (MQ=255)
tATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGATGTAAACCGGGATCGTACTCCAGa > 2:770733/1‑93 (MQ=255)
cGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGATGTAAACCGGGATCGTACTCCAGaaaa > 2:2433461/1‑93 (MQ=255)
aCAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGATGTAAACCGGGATCGTACTCCAGAAAAGc > 1:6286624/1‑93 (MQ=255)
cAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGATGTAAACCGGGATCGTACTCCAGAAAAGCg < 1:4950472/93‑1 (MQ=255)
aGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGATGTAAACCGGGATCGTACTCCAGAAAAGCGt > 1:3097873/1‑93 (MQ=255)
gCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGATGTAAACCGGGATCGTACTCCAGAAAAGCGTc < 2:3876980/93‑1 (MQ=255)
gCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGATGTAAACCGGGATCGTACTCCAGAAAAGCGTc > 2:4941574/1‑93 (MQ=255)
gCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAAAACCAGTACTGCAAGGCTGTAAACCGGGATCGTACTCCAGAAAAGCGTc > 1:1012253/1‑93 (MQ=255)
caccacCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGATGTAAACCGGGATCGTACTCCAGAAAAGCGTcc > 1:3574731/1‑93 (MQ=255)
aCCATCGGCATGGGGGAATACCCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGATGTAAACCGGGATCGTACTCCAGAAAAGCGTCCa < 1:4704378/93‑1 (MQ=255)
ccACCGGCATAGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGATGTAAACCGGGATCGTACTCCAGAAAAGCGTCCAt > 2:2930661/1‑93 (MQ=255)
|
CAATCGGAATTTCTGCTGCCGTGGGAATGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCATCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGATGTAAACCGGGATCGTACTCCAGAAAAGCGTCCATA > NC_000913/3294927‑3295109
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ACAATCGGAATTTCTGCTGCCGTGGGAATGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCATCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGATGTAAACCGGGATCGTACTCCAGAAAAGCGTCCATAGC > NC_000913/3294926‑3295111
|
ACAATCGGAATTTCTGCTGCCGTGGGAATGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCAC < SRR4302547.4039948/94‑1 (MQ=60)
CAATCGGAATTTCTGCTGCCGTGGGAATGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCATC < SRR4302547.6112854/94‑1 (MQ=60)
CAATCGGAATTTCTGCTGCCGTGGGAATGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACC < SRR4302547.3543170/94‑1 (MQ=60)
CAATCGGAATTTCTGCTGCCGTGGGAATGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACC < SRR4302547.1558621/94‑1 (MQ=60)
AATCGGAATTTCTGCTGCCGTGGGAATGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCG < SRR4302547.3312917/94‑1 (MQ=60)
AATCGGAATTTCTGCTGCCGTGGGAATGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCG > SRR4302547.3465452/1‑94 (MQ=60)
TCGGAATTTCTGCAGCCGTGGGAATGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCCCCGGC < SRR4302547.3309727/94‑1 (MQ=60)
CGGAATTTCTGCTGCCGTGGGAATGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCA < SRR4302547.3728277/94‑1 (MQ=60)
CGGAATTTCTGCTGCCGTGGGAATGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCA > SRR4302547.4342272/1‑94 (MQ=60)
GGAATTTCTGCTGCCGTTGGAATGACAAACAAGCATCCTGCTAGCGCCATCGCCACCACCCACATCAGTCTGTTATCGACAGCACCACCGGCAT > SRR4302547.3702886/1‑94 (MQ=60)
GGAATTTCTGCTGCCGTGGGAATGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCAT > SRR4302547.5737838/1‑94 (MQ=60)
GGAATTTCTGCTGCCGTGGGAATGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCAT > SRR4302547.2283607/1‑94 (MQ=60)
GGAATTTCTGCTGCCGTGGGAATGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCAT < SRR4302547.4872069/94‑1 (MQ=60)
GAATTTCTGCTGCCGTGGGAATGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCATCGGCATG < SRR4302547.1624327/94‑1 (MQ=60)
TTTCTGCTGCCGTGGGAATGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGG < SRR4302547.546064/94‑1 (MQ=60)
TTTCTGCTGCCGTGGGAATGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGG < SRR4302547.1810531/94‑1 (MQ=60)
TTTCTGCTGCCGGGGGAATGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGG < SRR4302547.185055/94‑1 (MQ=60)
TCTGCTGCCGTGGGAATGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGA < SRR4302547.107126/94‑1 (MQ=60)
CTGCTGCCGTGGGAATGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAA > SRR4302547.6757481/1‑94 (MQ=60)
CTGCTGCCGTGGGAATGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAA < SRR4302547.5919858/94‑1 (MQ=60)
TGCTGCCGTGGGAATGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAAT > SRR4302547.2352982/1‑94 (MQ=60)
GCTGCCGTGGGAATGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATA < SRR4302547.3908859/94‑1 (MQ=60)
GCTGCCGTGGGAATGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATA > SRR4302547.2254690/1‑94 (MQ=60)
GCCGTGGGAATGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACC > SRR4302547.2160911/1‑94 (MQ=60)
CCGTGGGAATGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCG > SRR4302547.6448039/1‑94 (MQ=60)
CCGTGGGAATGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCA < SRR4302547.1773732/94‑1 (MQ=60)
CCGTGGGAATGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCA < SRR4302547.2972358/94‑1 (MQ=60)
CGTGGGAATGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCATCGGCATGGGGGAATAACCAG > SRR4302547.2966095/1‑94 (MQ=60)
CGTGGGAATGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAG < SRR4302547.4832382/94‑1 (MQ=60)
CGTGGGAATGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAG > SRR4302547.3745980/1‑94 (MQ=60)
GTGGGAATGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGA < SRR4302547.6711110/94‑1 (MQ=60)
GTGGGAATGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGA > SRR4302547.1748150/1‑94 (MQ=60)
TGGGAATGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGAC < SRR4302547.1481825/94‑1 (MQ=60)
GGGAATGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCATCGGCATGGGGGAATAACCAGACG < SRR4302547.2200286/94‑1 (MQ=60)
GGGAATGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACG > SRR4302547.6741167/1‑94 (MQ=60)
GGAATGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCATATCAGGCTGTTATCGACAGCACCACCGGTATGGGGGAATAACCAGACGG > SRR4302547.6735477/1‑94 (MQ=60)
AATGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCATCGGCATGGGGGAATAACCAGACGCGA > SRR4302547.1543418/1‑94 (MQ=60)
ATGACAAACAAGCATCCTGCTTCCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAG < SRR4302547.5375729/94‑1 (MQ=60)
ATGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCCCCACCGGCATGGGGGAATACCCAGACGCGAG < SRR4302547.4628130/94‑1 (MQ=60)
ATGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAG < SRR4302547.1205756/94‑1 (MQ=60)
TGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGC < SRR4302547.3855489/94‑1 (MQ=60)
TGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGC > SRR4302547.5160251/1‑94 (MQ=60)
TGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGC < SRR4302547.1748097/94‑1 (MQ=60)
TGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGC < SRR4302547.1264318/94‑1 (MQ=60)
GACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCG < SRR4302547.5488541/94‑1 (MQ=60)
GACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCG > SRR4302547.262522/1‑94 (MQ=60)
GACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCG > SRR4302547.2061528/1‑94 (MQ=60)
ACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCATCGGCATGGGGGAATAACCAGACGCGAGCGG < SRR4302547.4563091/94‑1 (MQ=60)
CAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGC > SRR4302547.4884870/1‑94 (MQ=60)
CAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGATGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGC > SRR4302547.3769214/1‑94 (MQ=60)
AAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCATCGGCATGGGGGAATAACCAGACGCGAGCGGCA > SRR4302547.5944335/1‑94 (MQ=60)
AAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCA > SRR4302547.3126527/1‑94 (MQ=60)
ACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACC > SRR4302547.728929/1‑94 (MQ=60)
CAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCC > SRR4302547.6340839/1‑94 (MQ=60)
AAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCA > SRR4302547.4985238/1‑94 (MQ=60)
CATCCTGCTTCCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCGCCATCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACA < SRR4302547.2228149/94‑1 (MQ=60)
CATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACA < SRR4302547.3509709/94‑1 (MQ=60)
CATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACA > SRR4302547.3248897/1‑94 (MQ=60)
ATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGATAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACAC > SRR4302547.461250/1‑94 (MQ=60)
ATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACAC < SRR4302547.6046206/94‑1 (MQ=60)
TCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACC < SRR4302547.5304965/94‑1 (MQ=60)
CTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAG < SRR4302547.1635017/94‑1 (MQ=60)
CTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAG < SRR4302547.6571071/94‑1 (MQ=60)
TGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGT > SRR4302547.1609940/1‑94 (MQ=60)
CTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTAC > SRR4302547.3440923/1‑94 (MQ=60)
CTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTAC < SRR4302547.688171/94‑1 (MQ=60)
TACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACT > SRR4302547.1938407/1‑94 (MQ=60)
ACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTG > SRR4302547.5391094/1‑94 (MQ=60)
CCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCATCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGC > SRR4302547.3052548/1‑94 (MQ=60)
CCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGC < SRR4302547.763383/94‑1 (MQ=60)
CCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGC > SRR4302547.36255/1‑94 (MQ=60)
CGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCA > SRR4302547.5624007/1‑94 (MQ=60)
CGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCA < SRR4302547.1498431/94‑1 (MQ=60)
CGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCA > SRR4302547.1783341/1‑94 (MQ=60)
GCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAA > SRR4302547.463742/1‑94 (MQ=60)
CCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGAAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAA < SRR4302547.3771116/94‑1 (MQ=60)
CCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAG > SRR4302547.2404867/1‑94 (MQ=60)
CCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACAACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAG > SRR4302547.2914197/1‑94 (MQ=60)
CATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCATCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGG > SRR4302547.727241/1‑94 (MQ=60)
CATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGG < SRR4302547.6226550/94‑1 (MQ=60)
ATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGA < SRR4302547.5180476/94‑1 (MQ=60)
TCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCGCCCAACACCAGTACTGCAAGGAT < SRR4302547.2969991/94‑1 (MQ=60)
TCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGAT < SRR4302547.280235/94‑1 (MQ=60)
TCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGAT < SRR4302547.3676197/94‑1 (MQ=60)
TCGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGAT < SRR4302547.5870063/94‑1 (MQ=60)
CGCCACCACCCACATCAGGCTGTTATCGACAGCACCATCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGATG > SRR4302547.1106614/1‑94 (MQ=60)
CGCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGATG < SRR4302547.1099379/94‑1 (MQ=60)
GCCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGATGT > SRR4302547.6046148/1‑94 (MQ=60)
CCACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGATGTA < SRR4302547.193284/94‑1 (MQ=60)
CACCACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGATGTAA > SRR4302547.5508793/1‑94 (MQ=60)
CACCCACATCAGGCTGTTATCGACAGCACCATCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGATGTAAACC < SRR4302547.5767864/94‑1 (MQ=60)
CACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGATGTAAACC < SRR4302547.871275/94‑1 (MQ=60)
CCCCACATCAGGCTGTTATCGACAGCACCATCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGATGTAAACCG < SRR4302547.3637576/94‑1 (MQ=60)
ACCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGATGTAAACCG > SRR4302547.963010/1‑94 (MQ=60)
CCCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGATGTAAACCGG < SRR4302547.1375685/94‑1 (MQ=60)
CACACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGATGTAACCCGG < SRR4302547.5842251/94‑1 (MQ=60)
CCACATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGATGTAAACCGGG < SRR4302547.2281775/94‑1 (MQ=60)
CACATCAGACTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACCCCAGGACTGCAAGGATGTAAACCGGGG > SRR4302547.3920087/1‑94 (MQ=60)
CATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGATGTAAACCGGGATC < SRR4302547.5487143/94‑1 (MQ=60)
CATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGATGTAAACCGGGATC < SRR4302547.3525749/94‑1 (MQ=60)
ATCAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGATGTAAACCGGGATCG > SRR4302547.3620314/1‑94 (MQ=60)
TCAGGCTGTTATCGACAGCACCATCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGATGTAAACCGGGATCGT < SRR4302547.2800980/94‑1 (MQ=60)
CAGGCTGTTATCGACAGCACCATCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGATGTAAACCGGGATCGTA < SRR4302547.6325070/94‑1 (MQ=60)
CAGGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGATGTAAACCGGGATCGTA > SRR4302547.5137496/1‑94 (MQ=60)
CAGGCTCATAGCGACAGCAGCACCGGCCTGGGGGAATAACGAGACGCGAGCGGCACCCAACACCGGTACTGCAAGGGTGTAAAGCGGGATCGTA < SRR4302547.1285518/94‑1 (MQ=50)
GGCTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGATGTAAACCGGGATCGTACT < SRR4302547.3349279/94‑1 (MQ=60)
GCTGTTATCGACAGCACCATCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGATGTAAACCGGGATCGTACTC < SRR4302547.4078855/94‑1 (MQ=60)
CTGTTATCGACAGCACCATCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGATGTAAACCGGGATCGTACTCC > SRR4302547.4735629/1‑94 (MQ=60)
CTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGATGTAAACCGGGATCGTACTCC < SRR4302547.384294/94‑1 (MQ=60)
CTGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACAAGTACTGCAAGGATGTACACCGGGATCGTATTCC > SRR4302547.2328541/1‑94 (MQ=60)
CTGTTATCGACAGCACCACAGGCATGGGGGAATAACCAGATGCGACCGGCACCCAACACCAGTACTGCAAGGCTGTAAACTGGGATCGTACTCC > SRR4302547.2227788/1‑94 (MQ=60)
TGTTATCGACAGCACCATCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGATGTAAACCGGGATCGTACTCCA > SRR4302547.4427526/1‑94 (MQ=60)
TGTTATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGATGTAAACCGGGATCGTACTCCA > SRR4302547.6160823/1‑94 (MQ=60)
TATCGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGATGTAAACCGGGATCGTACTCCAGAA < SRR4302547.3752220/94‑1 (MQ=60)
ATCGACAGCACCATCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGATGTAAACCGGGATCGTACTCCAGAAA > SRR4302547.1256551/1‑94 (MQ=60)
TCGACAGCACAACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCACTACTGCAAGGgtgtagacctcggtcttactccagcaag > SRR4302547.226863/1‑66 (MQ=60)
CGACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCAGCCAACACCAGTACTGCAAGGATGTAAACCGGGATCGTACTCCAGAAAAG > SRR4302547.1137624/1‑94 (MQ=60)
GACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGATGTAAACCGGGATCGTACTCCAGAAAAGC > SRR4302547.3016441/1‑94 (MQ=60)
GACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGATGTAAACCGGGATCGTACTCCAGAAAAGC > SRR4302547.6417244/1‑94 (MQ=60)
GACAGCACCACCGGAATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGATGTAAACCGGGATCGTACTCCAGAAAAGC > SRR4302547.6417245/1‑94 (MQ=60)
ACAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGATGTAAACCGGGATCGTACTCCAGAAAAGCG < SRR4302547.5108838/94‑1 (MQ=60)
CAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGATGTAAACCGGGATCGTACTCCAGAAAAGCGT > SRR4302547.3159251/1‑94 (MQ=60)
CAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGATGTAAACCGGGATCGTACTCCAGAAAAGCGT > SRR4302547.3445938/1‑94 (MQ=60)
CAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGATGTAAACCGGGATCGTACTCCAGAAAAGCGT > SRR4302547.1051882/1‑94 (MQ=60)
CAGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGATGTAAACCGGGATCGTACTCCAGAAAAGCGT < SRR4302547.5052970/94‑1 (MQ=60)
AGCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAAAACCAGTACTGCAAGGCTGTAAACCGGGATCGTACTCCAGAAAAGCGTC > SRR4302547.1032042/1‑94 (MQ=60)
GCACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGATGTAAACCGGGATCGTACTCCAGAAAAGCGTCC > SRR4302547.3647657/1‑94 (MQ=60)
ACCATCGGCATGGGGGAATACCCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGATGTAAACCGGGATCGTACTCCAGAAAAGCGTCCAT < SRR4302547.4801804/94‑1 (MQ=60)
ACCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGATGTAAACCGGGATCGTACTCCAGAAAAGCGTCCAT < SRR4302547.5988997/94‑1 (MQ=60)
CCACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGATGTAAACCGGGATCGTACTCCAGAAAAGCGTCCATA > SRR4302547.5084334/1‑94 (MQ=60)
CACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGATGTAAACCGGGATCGTACTCCAGAAAAGCGTCCATAG < SRR4302547.3158560/94‑1 (MQ=60)
CACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGATGTAAACCGGGATCGTACTCCAGAAAAGCGTCCATAG < SRR4302547.1258155/94‑1 (MQ=60)
CACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGATGTAAACCGGGATCGTACTCCAGAAAAGCGTCCATAG < SRR4302547.1236798/94‑1 (MQ=60)
ACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGATGTAAACCGGGATCGTACTCCAGAAAAGCGTCCATAGC < SRR4302547.1650014/94‑1 (MQ=60)
ACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGATGTAAACCGGGATCGTACTCCAGAAAAGCGTCCATAGC < SRR4302547.4066360/94‑1 (MQ=60)
ACCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGATGTAAACCGGGATCGTACTCCAGAAAAGCGTCCATAGC < SRR4302547.4406121/94‑1 (MQ=60)
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ACAATCGGAATTTCTGCTGCCGTGGGAATGACAAACAAGCATCCTGCTACCGCCATCGCCACCACCCACATCAGGCTGTTATCGACAGCACCATCGGCATGGGGGAATAACCAGACGCGAGCGGCACCCAACACCAGTACTGCAAGGATGTAAACCGGGATCGTACTCCAGAAAAGCGTCCATAGC > NC_000913/3294926‑3295111
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
