Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I2 R1 593 264.2 13311096 97.8% 13018251 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,418,840 +G coding (1070/1089 nt) b3269 → putative transport system permease protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,418,8371.G98.6% 1009.7 / 3.6 278coding (1067/1089 nt)b3269putative transport system permease protein
Reads supporting (aligned to +/- strand):  ref base . (1/3);  new base G (133/141);  total (134/144)
Fisher's exact test for biased strand distribution p-value = 6.23e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 312 total aligned reads displayed.

GTATCTCAACATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGAC‑GG‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCTATAAC  >  NC_000913/3418745‑3418924
                                                                                             |                                                                                        
gTATCTCAACATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGAc                                                                                           >  2:4590688/1‑93 (MQ=255)
 tATCTCAACATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGAC‑g                                                                                         >  2:2662091/1‑93 (MQ=255)
  aTCTCAACATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGAC‑gg                                                                                        <  2:5957004/93‑1 (MQ=255)
   tctcAACATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGAC‑gg‑g                                                                                      >  2:5555024/1‑93 (MQ=255)
     tcAACATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGAC‑gg‑ggc                                                                                    >  1:1656706/1‑91 (MQ=255)
      cAACATCGTCAAAATCTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGAC‑gg‑ggca                                                                                   <  1:599395/93‑4 (MQ=255)
      cAACATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGAC‑gg‑ggca                                                                                   <  1:2404657/93‑4 (MQ=255)
            cGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGG‑GCAAGCCAt                                                                              <  1:1589063/93‑1 (MQ=255)
            cGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGG‑GCAAGCCAt                                                                              <  2:6555556/93‑1 (MQ=255)
             gTCAAAGTCTCCCCCCTGCCCGCCGCTATTGGCTAACCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGG‑GCAAGCCATc                                                                             <  2:4285717/93‑1 (MQ=255)
             gTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGG‑GCAAGCCATc                                                                             <  2:6058725/93‑1 (MQ=255)
             gTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGG‑GCAAGCCATc                                                                             <  1:3521648/93‑1 (MQ=255)
               cAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGG‑GCAAGCCATCga                                                                           <  1:3908787/93‑1 (MQ=255)
                  aacctcctcTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGG‑GCAAGCCATCGAGAc                                                                        <  1:3141011/90‑1 (MQ=255)
                  aaaCTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGG‑GCAAGCCATCGAGAc                                                                        <  1:1679974/93‑1 (MQ=255)
                    aCTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGG‑GCAAGCCATCGAGACGa                                                                      >  2:3467434/1‑93 (MQ=255)
                    aCTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGG‑GCAAGCCATCGAGACGa                                                                      >  2:6199431/1‑93 (MQ=255)
                      tcctcTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGG‑GCAAGCCATCGAGACGATa                                                                    >  2:6342423/1‑93 (MQ=255)
                      tcctcTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGG‑GCAAGCCATCGAGACGATa                                                                    >  2:2163663/1‑93 (MQ=255)
                        ctctctTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGG‑GCAAGCCATCGAGACGATAGc                                                                  <  2:2019212/93‑1 (MQ=255)
                         tctctTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGG‑GCAAGCCATCGAGACGATAGcc                                                                 >  1:2873607/1‑93 (MQ=255)
                          ctctTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGG‑GCAAGCCATCGAGACGATAGCCa                                                                >  2:6605518/1‑93 (MQ=255)
                          ctctTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGG‑GCAAGCCATCGAGACGATAGCCa                                                                <  1:1072021/93‑1 (MQ=255)
                           tctTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGG‑GCAAGCCATCGAGACGATAGCCAt                                                               >  2:1922228/1‑93 (MQ=255)
                           tctTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGG‑GCAAGCCATCGAGACGATAGCCAt                                                               <  2:5003899/93‑1 (MQ=255)
                           tctGGCCGCCCCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCCCCGTGCTGAATCAGACGGG‑GCAAGCCATCGAGACGATAGCCAt                                                               <  1:1294866/93‑1 (MQ=255)
                             ttGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGG‑GCAAGCCATCGAGACGATAGCCATGa                                                             <  1:2214035/93‑1 (MQ=255)
                               gccgccGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGG‑GCAAGCCATCGAGACGATAGCCATGAcc                                                           >  1:4072732/1‑93 (MQ=255)
                                ccgccgCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCCCCGTGCTGAATCAGACGGG‑GCAAGCCATCGAGACGATAGCCATGACCa                                                          <  1:2806372/93‑1 (MQ=255)
                                ccgccgCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGG‑GCAAGCCATCGAGACGATAGCCATGACCa                                                          <  2:5397868/93‑1 (MQ=255)
                                 cgccgcTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGG‑GCAAGCCATCGAGACGATAGCCATGACCAt                                                         >  1:195539/1‑93 (MQ=255)
                                  gccgcTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGG‑GCAAGCCATCGAGACGATAGCCATGACCATg                                                        >  1:1183964/1‑93 (MQ=255)
                                  gccgcTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGG‑GCAAGCCATCGAGACGATAGCCATGACCATg                                                        >  1:4419078/1‑93 (MQ=255)
                                   ccgcTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGG‑GCAAGCCATCGAGACGATAGCCATGACCATGt                                                       >  2:5086456/1‑93 (MQ=255)
                                   ccgcTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGG‑GCAAGCCATCGAGACGATAGCCATGACCATGt                                                       <  1:5608703/93‑1 (MQ=255)
                                    cgcTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGG‑GCAAGCCATCGAGACGATAGCCATGACCATGTc                                                      <  2:4019186/93‑1 (MQ=255)
                                     gcTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGG‑GCAAGCCATCGAGACGATAGCCATGACCATGTCg                                                     >  2:3882495/1‑93 (MQ=255)
                                     gcTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGG‑GCAAGCCATCGAGACGATAGCCATGACCATGTCg                                                     >  1:375887/1‑93 (MQ=255)
                                      cTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGG‑GCAAGCCATCGAGACGATAGCCATGACCATGTCgg                                                    <  1:2351375/93‑1 (MQ=255)
                                      cTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGG‑GCAAGCCATCGAGACGATAGCCATGACCATGTCgg                                                    <  2:1436853/93‑1 (MQ=255)
                                       tATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGG‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGt                                                   >  1:3078284/1‑93 (MQ=255)
                                       tATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGG‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGt                                                   >  1:978132/1‑93 (MQ=255)
                                       tATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGG‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGt                                                   >  2:2453423/1‑93 (MQ=255)
                                        aTTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGG‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTc                                                  <  2:1345405/93‑1 (MQ=255)
                                        aTTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGG‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTc                                                  >  2:2276606/1‑93 (MQ=255)
                                          tGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGG‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTa                                                >  1:546928/1‑93 (MQ=255)
                                          tGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGG‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTa                                                >  1:6274339/1‑93 (MQ=255)
                                          tGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGG‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTa                                                >  1:4533009/1‑93 (MQ=255)
                                           ggCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGG‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTAt                                               >  2:2861028/1‑93 (MQ=255)
                                            gCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGG‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATc                                              >  2:3815822/1‑93 (MQ=255)
                                            gCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGG‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATc                                              >  1:4934945/1‑93 (MQ=255)
                                               aTCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGG‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGa                                           >  1:5080621/1‑93 (MQ=255)
                                               aTCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGG‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGa                                           <  1:2626043/93‑1 (MQ=255)
                                                 cccGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGG‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGAtt                                         <  1:4195587/93‑1 (MQ=255)
                                                  ccGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGG‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTa                                        >  2:3675364/1‑93 (MQ=255)
                                                   cGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGG‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTAt                                       >  2:613826/1‑93 (MQ=255)
                                                   cGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGG‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTAt                                       <  1:4621113/93‑1 (MQ=255)
                                                    gATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGG‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATc                                      >  1:2450002/1‑93 (MQ=255)
                                                    gATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGG‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATc                                      <  1:4743419/93‑1 (MQ=255)
                                                     atatGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGG‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCa                                     <  1:184888/93‑1 (MQ=255)
                                                     atatGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGG‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCa                                     >  1:6526/1‑93 (MQ=255)
                                                      tatGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGG‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAg                                    <  1:2890105/93‑1 (MQ=255)
                                                         gttttCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGG‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCt                                 <  1:1457760/91‑1 (MQ=255)
                                                         ggTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGG‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCt                                 <  1:2005527/93‑1 (MQ=255)
                                                         ggTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGG‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCt                                 >  2:3170675/1‑93 (MQ=255)
                                                          gTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGG‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTg                                >  2:5250399/1‑93 (MQ=255)
                                                          gTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGG‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTg                                >  1:536356/1‑93 (MQ=255)
                                                             tCGCTGTTTGCCGGCACCGTGCTGAATCAGAC‑GGAGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACt                             <  2:2592645/93‑1 (MQ=255)
                                                             tCGCTGTTTGCCGCCACCGTGCTGAATCAGACGGG‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACt                             <  2:3586669/93‑1 (MQ=255)
                                                              cGCTGTTTGCCGGCACCGTGCTGAATCAGACGGG‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTa                            <  2:4828405/93‑1 (MQ=255)
                                                               gCTGTTTGCCGGCACCGTGCTGAATCAGACGGG‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTAt                           >  2:277742/1‑93 (MQ=255)
                                                               gCTGTTTGCCGGCACCGTGCTGAATCAGACGGG‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTAt                           >  1:1254105/1‑93 (MQ=255)
                                                                cTGTTTGCCGGCACCGTGCTGAATCAGACGGG‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTAtc                          >  2:4380621/1‑93 (MQ=255)
                                                                 tGTTTGCCGGCACCGTGCTGAATCAGACGGG‑GCAAGCCATCGAGACGATAGCCGTGACCATGTCGGTCTATCTGATTATCAGCCTGACTAtct                         <  2:5641325/93‑1 (MQ=255)
                                                                 tGTTTGCCGGCACCGTGCTGAATCAGACGGG‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTAtct                         <  2:55173/93‑1 (MQ=255)
                                                                  gTTTGCCGGCACCGTGCTGAATCAGACGGG‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTAtctc                        >  1:5857747/1‑93 (MQ=255)
                                                                    ttGCCGGCACCGTGCTGAATCAGACGGG‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCgc                      >  1:5173755/1‑93 (MQ=255)
                                                                     tGCCGGCACCGTGCTGAATCAGACGGG‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCgct                     <  1:3997360/93‑1 (MQ=255)
                                                                       ccGGCACCGTGCTGAATCAGACGGG‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCgctgc                   <  1:2257213/93‑1 (MQ=255)
                                                                       ccGGCACCGTGCTGAATCAGACGGG‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCgctgc                   <  2:3081924/93‑1 (MQ=255)
                                                                       ccGGCACCGTGCTGAATCAGACGGG‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCgctgc                   >  1:427611/1‑93 (MQ=255)
                                                                         ggCACCGTGCTGAATCAGACGGG‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTATATCTGATTATCAGCCTGACTATCTCGctgctg                 >  2:1806162/1‑93 (MQ=255)
                                                                          gCACCGTGCTGAATCAGACGGG‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCtga                <  1:2082424/93‑1 (MQ=255)
                                                                          gCACCGTGCTGAATCAGACGGG‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCtga                >  1:346973/1‑93 (MQ=255)
                                                                           cACCGTGCTGAATCAGACGGG‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCtgat               <  1:3942704/93‑1 (MQ=255)
                                                                             ccGTGCTGAAGCAGACGGG‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCtgatga             <  2:2226050/93‑1 (MQ=255)
                                                                              cGTGCTGAATCAGACGGG‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGaa            >  2:862162/1‑93 (MQ=255)
                                                                              cGTGCTGAATCAGACGGG‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGaa            <  2:4100348/93‑1 (MQ=255)
                                                                                tGCTGAATCAGACGGG‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAatt          >  1:5710603/1‑92 (MQ=255)
                                                                                tGCTGAATCAGACGGG‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAata          <  1:4692387/93‑1 (MQ=255)
                                                                                  cTGAATCAGACGGG‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATc        <  2:4747304/93‑1 (MQ=255)
                                                                                  cTGAATCAGACGGG‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATc        <  2:6438063/93‑1 (MQ=255)
                                                                                   tGAATCAGACGGG‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCt       <  2:4320262/93‑1 (MQ=255)
                                                                                   tGAATCAGACGGG‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCt       >  2:331114/1‑93 (MQ=255)
                                                                                   tGAATCAGACGGG‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCt       >  1:880785/1‑93 (MQ=255)
                                                                                    gAATCAGACGGG‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCta      <  2:1270400/93‑1 (MQ=255)
                                                                                    gAATCAGACGGG‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCta      <  1:1216237/93‑1 (MQ=255)
                                                                                     aaTCAGACGGG‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCtat     <  2:6473315/93‑1 (MQ=255)
                                                                                      aTCAGACGGG‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCtata    <  2:1144254/93‑1 (MQ=255)
                                                                                        cAGACGGG‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCTATAAc  <  1:319897/93‑1 (MQ=255)
                                                                                             |                                                                                        
GTATCTCAACATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGAC‑GG‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCTATAAC  >  NC_000913/3418745‑3418924

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
ATCTCAACATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGAC‑G‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCTATAACCGCCGCATC  >  NC_000913/3418747‑3418933
                                                                                                |                                                                                             
ATCTCAACATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGAC‑G‑G‑G                                                                                               >  SRR4302547.179348/1‑94 (MQ=60)
ATCTCAACATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGAC‑G‑G‑G                                                                                               <  SRR4302547.1629994/94‑1 (MQ=60)
ATCTCAACATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGAC‑G‑G‑G                                                                                               >  SRR4302547.811453/1‑94 (MQ=60)
  CTCAACATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGAC‑G‑G‑Ggc                                                                                             >  SRR4302547.3362762/1‑92 (MQ=60)
  CTCAACATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGAC‑G‑G‑Ggc                                                                                             >  SRR4302547.2031915/1‑92 (MQ=60)
  CTCAACATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGAC‑G‑G‑Ggc                                                                                             >  SRR4302547.1689383/1‑92 (MQ=60)
  CTCAACATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGAC‑G‑G‑Ggc                                                                                             <  SRR4302547.603088/94‑3 (MQ=60)
   TCAACATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCCGAC‑G‑G‑Ggca                                                                                            >  SRR4302547.4908435/1‑91 (MQ=60)
    CAACATCGTCAAAATCTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAA                                                                                            <  SRR4302547.610451/94‑1 (MQ=60)
    CAACATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAA                                                                                            <  SRR4302547.2453346/94‑1 (MQ=60)
     AACATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAG                                                                                           >  SRR4302547.1034853/1‑94 (MQ=60)
      ACATCGTCAAAAACTCCTCTTTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGC                                                                                          <  SRR4302547.5392852/94‑1 (MQ=60)
      ACATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGC                                                                                          <  SRR4302547.5413072/94‑1 (MQ=60)
       CATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCC                                                                                         >  SRR4302547.4287415/1‑94 (MQ=60)
        ATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGTCACCGTGCTGAATCAGAC‑G‑GAGCAAGGCA                                                                                        >  SRR4302547.6345003/1‑94 (MQ=60)
          CGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATC                                                                                      <  SRR4302547.1620635/94‑1 (MQ=60)
          CGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATC                                                                                      <  SRR4302547.976883/94‑1 (MQ=60)
           GTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCG                                                                                     <  SRR4302547.3593533/94‑1 (MQ=60)
           GTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCA                                                                                     <  SRR4302547.1551634/94‑1 (MQ=60)
            TCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGA                                                                                    <  SRR4302547.4719894/94‑1 (MQ=60)
            TCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGA                                                                                    <  SRR4302547.2650752/94‑1 (MQ=60)
             CAAAACCTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAG                                                                                   <  SRR4302547.540868/94‑1 (MQ=60)
             CAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAG                                                                                   >  SRR4302547.5971044/1‑94 (MQ=60)
             CAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAG                                                                                   <  SRR4302547.3988281/94‑1 (MQ=60)
             CAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAG                                                                                   <  SRR4302547.1693343/94‑1 (MQ=60)
             CAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAG                                                                                   >  SRR4302547.287189/1‑94 (MQ=60)
             CAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTAGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAG                                                                                   >  SRR4302547.5384513/1‑94 (MQ=60)
               AAACCTCCTCTCTTGCCGCCTCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGAC                                                                                 <  SRR4302547.3886650/94‑1 (MQ=60)
                AAGCTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACG                                                                                <  SRR4302547.1572607/94‑1 (MQ=60)
                AACCTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACG                                                                                <  SRR4302547.3203413/94‑1 (MQ=60)
                AAACTCCTCTCTTGCCGCCGGTATTGGCTATCCCGATATTGGTTCGCTGTTTGGCCGCACCGTGCTGAATCAGAC‑GCG‑GCAAGCCATCGAGACG                                                                                >  SRR4302547.956629/1‑94 (MQ=60)
                AAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACG                                                                                <  SRR4302547.1713049/94‑1 (MQ=60)
                AAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACG                                                                                >  SRR4302547.2473616/1‑94 (MQ=60)
                 ACCTCCTCTCTTGCCGCCTCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGA                                                                               <  SRR4302547.4810480/94‑1 (MQ=60)
                  ACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGAT                                                                              <  SRR4302547.3203884/94‑1 (MQ=60)
                   CTCCTCTCTTGCCGCGGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATA                                                                             <  SRR4302547.1646027/94‑1 (MQ=60)
                   CTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATA                                                                             <  SRR4302547.1203800/94‑1 (MQ=60)
                    TCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAG                                                                            <  SRR4302547.2936114/94‑1 (MQ=60)
                    TCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGAC‑G‑GAGCAAGCCATCGAGACGATAG                                                                            >  SRR4302547.4431124/1‑94 (MQ=60)
                     CCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGC                                                                           >  SRR4302547.5193650/1‑94 (MQ=60)
                     CCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGC                                                                           >  SRR4302547.983573/1‑94 (MQ=60)
                     CCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACAG‑G‑GCCAGACATCGAGACGATAGC                                                                           >  SRR4302547.2391522/1‑94 (MQ=60)
                      CTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCC                                                                          >  SRR4302547.2930975/1‑94 (MQ=60)
                      CTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCC                                                                          <  SRR4302547.776191/94‑1 (MQ=60)
                      CTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCC                                                                          <  SRR4302547.5507714/94‑1 (MQ=60)
                      CTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCC                                                                          >  SRR4302547.4585032/1‑94 (MQ=60)
                      CTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCC                                                                          >  SRR4302547.1258826/1‑94 (MQ=60)
                       TCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCA                                                                         >  SRR4302547.4128896/1‑94 (MQ=60)
                        CTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCAT                                                                        <  SRR4302547.1093379/94‑1 (MQ=60)
                        CTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCAT                                                                        >  SRR4302547.2176351/1‑94 (MQ=60)
                         TCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATG                                                                       <  SRR4302547.229621/94‑1 (MQ=60)
                         TCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATG                                                                       >  SRR4302547.5273306/1‑94 (MQ=60)
                         TCTGGCCGCCCCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCCCCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATG                                                                       <  SRR4302547.1320933/94‑1 (MQ=60)
                          CTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGA                                                                      >  SRR4302547.6565379/1‑94 (MQ=60)
                          CTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGA                                                                      >  SRR4302547.2969448/1‑94 (MQ=60)
                           TTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGAC                                                                     >  SRR4302547.4780250/1‑94 (MQ=60)
                           TTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGAC                                                                     <  SRR4302547.2258568/94‑1 (MQ=60)
                            TGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACC                                                                    >  SRR4302547.4155469/1‑94 (MQ=60)
                             GCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCA                                                                   <  SRR4302547.575354/94‑1 (MQ=60)
                             GCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCA                                                                   >  SRR4302547.6374941/1‑94 (MQ=60)
                              CCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCCCCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCAT                                                                  <  SRR4302547.2862541/94‑1 (MQ=60)
                              CCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCAT                                                                  <  SRR4302547.2440145/94‑1 (MQ=60)
                              CCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCAT                                                                  >  SRR4302547.1214947/1‑94 (MQ=60)
                              CCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCAT                                                                  >  SRR4302547.199192/1‑94 (MQ=60)
                               CGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATG                                                                 >  SRR4302547.1207879/1‑94 (MQ=60)
                               CGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATG                                                                 >  SRR4302547.4510299/1‑94 (MQ=60)
                                GCCTCTATTGGCTATCCCGATATGGTTACGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGT                                                                <  SRR4302547.5490686/94‑1 (MQ=60)
                                 CCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTC                                                               <  SRR4302547.5724438/94‑1 (MQ=60)
                                 CCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTC                                                               <  SRR4302547.4695640/94‑1 (MQ=60)
                                  CGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCG                                                              >  SRR4302547.382855/1‑94 (MQ=60)
                                  CGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCG                                                              >  SRR4302547.3572320/1‑94 (MQ=60)
                                  CGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCG                                                              <  SRR4302547.3431029/94‑1 (MQ=60)
                                    CTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGT                                                            <  SRR4302547.4186730/94‑1 (MQ=60)
                                    CTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGT                                                            >  SRR4302547.5633894/1‑94 (MQ=60)
                                    CTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGT                                                            >  SRR4302547.997152/1‑94 (MQ=60)
                                    CTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGT                                                            >  SRR4302547.2487024/1‑94 (MQ=60)
                                    CTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGT                                                            >  SRR4302547.3139417/1‑94 (MQ=60)
                                    CTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGT                                                            <  SRR4302547.2399028/94‑1 (MQ=60)
                                       TTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTA                                                         >  SRR4302547.556803/1‑94 (MQ=60)
                                       TTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTA                                                         >  SRR4302547.6404678/1‑94 (MQ=60)
                                       TTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTA                                                         >  SRR4302547.4626692/1‑94 (MQ=60)
                                       TTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTA                                                         >  SRR4302547.3567242/1‑94 (MQ=60)
                                        TGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTAT                                                        >  SRR4302547.4252525/1‑94 (MQ=60)
                                        TGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTAT                                                        <  SRR4302547.4024161/94‑1 (MQ=60)
                                         GGCTATCCCGCTATGGTTTCGCTGTTTGCCGGCGCCCTGCTGACTCAGACGG‑G‑GCAAGCGATCGAGACGACAGTCACGACCACGTCGGTCTATC                                                       >  SRR4302547.4518438/1‑94 (MQ=36)
                                         GGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATC                                                       >  SRR4302547.2605948/1‑94 (MQ=60)
                                         GGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATC                                                       >  SRR4302547.5037179/1‑94 (MQ=60)
                                         GGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATC                                                       >  SRR4302547.3944857/1‑94 (MQ=60)
                                           CTATCCCGATATGGTTTCGCTGTTTGCCGCCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTG                                                     <  SRR4302547.4420922/94‑1 (MQ=60)
                                            TATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGA                                                    >  SRR4302547.5185454/1‑94 (MQ=60)
                                            TATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGA                                                    <  SRR4302547.4353511/94‑1 (MQ=60)
                                             ATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGAT                                                   <  SRR4302547.2678941/94‑1 (MQ=60)
                                              TCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATT                                                  <  SRR4302547.1119668/94‑1 (MQ=60)
                                              TCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATT                                                  <  SRR4302547.1314413/94‑1 (MQ=60)
                                               CCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTA                                                 <  SRR4302547.4690349/94‑1 (MQ=60)
                                               CCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTA                                                 <  SRR4302547.4281151/94‑1 (MQ=60)
                                               CCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTA                                                 <  SRR4302547.4063355/94‑1 (MQ=60)
                                                CCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTAT                                                >  SRR4302547.2933328/1‑94 (MQ=60)
                                                 CGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATC                                               >  SRR4302547.2499509/1‑94 (MQ=60)
                                                 CGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATC                                               <  SRR4302547.4716807/94‑1 (MQ=60)
                                                  GATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCA                                              >  SRR4302547.6644/1‑94 (MQ=60)
                                                  GATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCA                                              <  SRR4302547.2874911/94‑1 (MQ=60)
                                                  GATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCA                                              <  SRR4302547.4841714/94‑1 (MQ=60)
                                                   ATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAG                                             <  SRR4302547.188365/94‑1 (MQ=60)
                                                    TATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGC                                            <  SRR4302547.2947750/94‑1 (MQ=60)
                                                     ATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCC                                           >  SRR4302547.171799/1‑94 (MQ=60)
                                                      TGGTTTCGCTGTTTGCCGGCACGGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCT                                          <  SRR4302547.3720191/94‑1 (MQ=60)
                                                      TGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCT                                          <  SRR4302547.1251792/94‑1 (MQ=60)
                                                       GTTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTG                                         <  SRR4302547.1486891/94‑1 (MQ=60)
                                                       GGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTG                                         <  SRR4302547.2045436/94‑1 (MQ=60)
                                                       GGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTG                                         >  SRR4302547.546048/1‑94 (MQ=60)
                                                          TTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACT                                      <  SRR4302547.446311/94‑1 (MQ=60)
                                                            CGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTAT                                    <  SRR4302547.374651/94‑1 (MQ=60)
                                                            CGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTAT                                    <  SRR4302547.2743859/94‑1 (MQ=60)
                                                            CGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTAT                                    >  SRR4302547.1279397/1‑94 (MQ=60)
                                                            CGCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTAT                                    <  SRR4302547.2308212/94‑1 (MQ=60)
                                                             GCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATC                                   <  SRR4302547.1928470/94‑1 (MQ=60)
                                                             GCTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATC                                   >  SRR4302547.5771844/1‑94 (MQ=60)
                                                              CTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCT                                  >  SRR4302547.1292990/1‑94 (MQ=60)
                                                              CTGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCT                                  >  SRR4302547.2435584/1‑94 (MQ=60)
                                                               TGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTC                                 >  SRR4302547.5978947/1‑94 (MQ=60)
                                                               TGTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTC                                 <  SRR4302547.187802/94‑1 (MQ=60)
                                                                ttctgcctgcgccgctCTGAACCAGAC‑G‑GTGCAAGCCATCGAGACGATGGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCG                                <  SRR4302547.4032477/78‑1 (MQ=60)
                                                                GTTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCG                                >  SRR4302547.1946307/1‑94 (MQ=60)
                                                                 TTTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGC                               >  SRR4302547.5280261/1‑94 (MQ=60)
                                                                  TTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCT                              <  SRR4302547.1692266/94‑1 (MQ=60)
                                                                  TTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCT                              <  SRR4302547.4083734/94‑1 (MQ=60)
                                                                  TTGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCT                              <  SRR4302547.4996723/94‑1 (MQ=60)
                                                                   TGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTG                             <  SRR4302547.2997907/94‑1 (MQ=60)
                                                                   TGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTG                             <  SRR4302547.4801224/94‑1 (MQ=60)
                                                                   TGCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTG                             <  SRR4302547.4078620/94‑1 (MQ=60)
                                                                    GCCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGC                            >  SRR4302547.435528/1‑94 (MQ=60)
                                                                     CCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCT                           <  SRR4302547.2302795/94‑1 (MQ=60)
                                                                     CCGGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCT                           <  SRR4302547.5654392/94‑1 (MQ=60)
                                                                       GGCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGA                         >  SRR4302547.353418/1‑94 (MQ=60)
                                                                        GCACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGAT                        <  SRR4302547.2123949/94‑1 (MQ=60)
                                                                         CACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATG                       <  SRR4302547.4022879/94‑1 (MQ=60)
                                                                          ACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGA                      >  SRR4302547.2283628/1‑94 (MQ=60)
                                                                          ACCGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGA                      <  SRR4302547.3237877/94‑1 (MQ=60)
                                                                            CGTGCTGCATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAAT                    <  SRR4302547.2491883/94‑1 (MQ=60)
                                                                            CGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAAT                    <  SRR4302547.1423206/94‑1 (MQ=60)
                                                                            CGTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAAT                    >  SRR4302547.34608/1‑94 (MQ=60)
                                                                             GTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATT                   >  SRR4302547.5828552/1‑94 (MQ=60)
                                                                             GTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATA                   >  SRR4302547.2162346/1‑94 (MQ=60)
                                                                             GTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATA                   <  SRR4302547.1217692/94‑1 (MQ=60)
                                                                             GTGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATA                   <  SRR4302547.3171130/94‑1 (MQ=60)
                                                                              TGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATAT                  <  SRR4302547.4789568/94‑1 (MQ=60)
                                                                              TGCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATAT                  <  SRR4302547.5063340/94‑1 (MQ=60)
                                                                              TCCTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATAT                  <  SRR4302547.5144385/94‑1 (MQ=60)
                                                                                CTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCT                >  SRR4302547.897710/1‑94 (MQ=60)
                                                                                CTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCT                >  SRR4302547.4537897/1‑94 (MQ=60)
                                                                                CTGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCT                <  SRR4302547.2012850/94‑1 (MQ=60)
                                                                                 TGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCTA               <  SRR4302547.2810658/94‑1 (MQ=60)
                                                                                 TGAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCTA               >  SRR4302547.4014156/1‑94 (MQ=60)
                                                                                  GAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCTAT              <  SRR4302547.1240775/94‑1 (MQ=60)
                                                                                  GAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCTAT              <  SRR4302547.2066885/94‑1 (MQ=60)
                                                                                  GAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCTAT              >  SRR4302547.6613295/1‑94 (MQ=60)
                                                                                  GAATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCTAT              >  SRR4302547.3999154/1‑94 (MQ=60)
                                                                                   AATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCTATA             <  SRR4302547.2051521/94‑1 (MQ=60)
                                                                                   AATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCTATA             <  SRR4302547.5997791/94‑1 (MQ=60)
                                                                                   AATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCTATA             <  SRR4302547.5850504/94‑1 (MQ=60)
                                                                                    ATCAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCTATAA            >  SRR4302547.5298824/1‑94 (MQ=60)
                                                                                      CAGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCTATAACC          <  SRR4302547.325848/94‑1 (MQ=60)
                                                                                       AGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCTATAACCG         <  SRR4302547.3855189/94‑1 (MQ=60)
                                                                                       AGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCTATAACCG         <  SRR4302547.3342488/94‑1 (MQ=60)
                                                                                       AGACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACAATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCTATAACCG         >  SRR4302547.237752/1‑94 (MQ=60)
                                                                                        GACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCTATAACCGC        <  SRR4302547.6218089/94‑1 (MQ=60)
                                                                                        GACGG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCTATAACCGC        <  SRR4302547.369341/94‑1 (MQ=60)
                                                                                         aggG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCTATAACCGCC       <  SRR4302547.2503004/91‑1 (MQ=60)
                                                                                          cgG‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCTATAACCGCCG      >  SRR4302547.3596204/3‑94 (MQ=60)
                                                                                          G‑G‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCTATAACCGCCGC     >  SRR4302547.6131945/1‑94 (MQ=60)
                                                                                                GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCTATAACCGCCGCATC  <  SRR4302547.1297520/94‑1 (MQ=60)
                                                                                                GCAACCCATCGAGAGGATAGCCATGACCATGGCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCTATAACCGCCGCATC  <  SRR4302547.6239075/94‑1 (MQ=60)
                                                                                                GAAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCTATAACCGCCGCATC  <  SRR4302547.1007315/94‑1 (MQ=60)
                                                                                                |                                                                                             
ATCTCAACATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGAC‑G‑G‑GCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCTATAACCGCCGCATC  >  NC_000913/3418747‑3418933

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑