Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
593 |
264.2 |
13311096 |
97.8% |
13018251 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,465,851 |
T→C |
Y547C (TAC→TGC) |
yheB ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,465,851 | 0 | T | C | 82.1%
| 595.0
/ 125.7
| 251 | Y547C (TAC→TGC) | yheB | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (21/24); new base C (107/99); total (128/123) |
| Fisher's exact test for biased strand distribution p-value = 6.22e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.50e-01 |
Only 100 of 254 total aligned reads displayed.
CTACGCGCTCTTTGGTTCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGTAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGCTCTTCGTTGCTATA > NC_000913/3465759‑3465942
|
cTACGCGCTCTTTGGTTCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGt < 2:6298875/93‑1 (MQ=255)
tACGCGCTCTTTGGTTCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGTa < 2:5015705/93‑1 (MQ=255)
aCGCGCTCTTTGGTTCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAg > 1:3835769/1‑93 (MQ=255)
aCGCGCTCTTTGGTTCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAg < 2:2386204/93‑1 (MQ=255)
cgcgCTCTTTGGTTCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGt < 1:4979804/93‑1 (MQ=255)
cgcgCTCTTTGGTTCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGt < 1:1059579/93‑1 (MQ=255)
gcgcTCTTTGGTTCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGtt > 1:2258454/1‑93 (MQ=255)
gcTCTTTGGTTCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTca < 2:4413858/93‑1 (MQ=255)
gcTCTTTGGTTCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTca < 2:4908604/93‑1 (MQ=255)
ctctTTGGTTCCGGCCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGTAGTTcac < 1:4581231/93‑1 (MQ=255)
tttttGGTCCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTcaca < 1:29426/91‑1 (MQ=255)
tctTTGGTTCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGTAGTTcaca > 1:6107741/1‑93 (MQ=255)
tttGGTTCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACAcc < 2:1034640/93‑1 (MQ=255)
gTTCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTa > 1:4992750/1‑93 (MQ=255)
tCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTaaa > 1:4231972/1‑93 (MQ=255)
ccGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGCAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAg > 1:1000707/1‑93 (MQ=255)
ccGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAg > 2:4019844/1‑93 (MQ=255)
cGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGc < 1:788683/93‑1 (MQ=255)
ggTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCg < 2:2747226/93‑1 (MQ=255)
tCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGTAGTTCACACCGTTAAAGCGaa < 2:6613540/93‑1 (MQ=255)
cAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATc < 1:2465080/93‑1 (MQ=255)
aGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCa > 2:4223952/1‑93 (MQ=255)
aGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCa < 2:4061558/93‑1 (MQ=255)
gTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAg > 1:3390076/1‑93 (MQ=255)
tCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGc > 2:5646662/1‑93 (MQ=255)
tCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGc > 2:534135/1‑93 (MQ=255)
tCAACAAAAACACGCCACGGGTTGCCGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGCTAAAGCGAATCAGc > 2:1658061/1‑93 (MQ=255)
caacaaAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCg < 2:5136013/93‑1 (MQ=255)
aacaaAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGt > 2:4338029/1‑93 (MQ=255)
aacaaAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGt > 2:847710/1‑93 (MQ=255)
acaaAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTa < 1:1668737/93‑1 (MQ=255)
caaAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTAGTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTAt < 2:3557717/93‑1 (MQ=255)
aaaaaCACGCCACGGGTTGCTGTCAGACGGAGAAACATTCTGCACTTAGCTATGAGAAAAGCAGTTCACACAGTTAAAGCGAATCAGCGTATc < 1:6645054/93‑1 (MQ=255)
aaaaaCACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATc < 1:3705051/93‑1 (MQ=255)
aaaaaCACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAACCAGCGTATc < 2:6045265/93‑1 (MQ=255)
aaaaCACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGTAGTTCACACCGTTAAAGCGAATCAGCGTATCg > 1:6029305/1‑93 (MQ=255)
aaaCACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGc < 2:1542431/93‑1 (MQ=255)
aaaCACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGc < 1:5245937/93‑1 (MQ=255)
aaaCACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGc > 1:6187215/1‑93 (MQ=255)
aaCACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGTAGTTCACACCGTTAAAGCGAATCAGCGTATCGCt < 1:6546572/93‑1 (MQ=255)
acacGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGTAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTg < 1:1691128/93‑1 (MQ=255)
acGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGc > 2:204539/1‑93 (MQ=255)
acGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGc < 1:3067412/93‑1 (MQ=255)
cGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGTAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCa > 2:3899658/1‑93 (MQ=255)
ccACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGTAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATa < 1:3321386/93‑1 (MQ=255)
ccACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATa > 2:74734/1‑93 (MQ=255)
cACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATaa < 1:2140920/93‑1 (MQ=255)
cGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAg < 2:257743/93‑1 (MQ=255)
ggTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCg > 2:3933352/1‑93 (MQ=255)
gCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTc < 2:5555678/93‑1 (MQ=255)
tGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTTGCATAAAGCGGTTCTg > 1:589527/1‑93 (MQ=255)
gTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTgg > 2:6017751/1‑93 (MQ=255)
tCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGa < 1:5988867/93‑1 (MQ=255)
cAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGAt < 1:2978160/93‑1 (MQ=255)
cAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGAt < 2:705264/93‑1 (MQ=255)
aGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGAtt > 1:1033512/1‑93 (MQ=255)
gAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTa < 2:1622990/93‑1 (MQ=255)
aaGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTaa > 1:1247586/1‑93 (MQ=255)
aGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTaaa < 2:361220/93‑1 (MQ=255)
ggAGAGACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAAc > 2:2558232/1‑93 (MQ=255)
ggAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAAc < 1:3233697/93‑1 (MQ=255)
ggAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAAc < 1:3019858/93‑1 (MQ=255)
ggAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAAc < 2:6135650/93‑1 (MQ=255)
ggAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAAc > 1:3988561/1‑93 (MQ=255)
gagaAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACt < 1:4255744/93‑1 (MQ=255)
agaAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTg > 2:1279345/1‑93 (MQ=255)
gaAACTTTCTGCACTTTACTCTGAGAAATGTAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTgc > 1:5499098/1‑93 (MQ=255)
gaAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTgc > 2:5163546/1‑93 (MQ=255)
gaAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTgc > 1:1883077/1‑93 (MQ=255)
gaAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTgc < 1:942801/93‑1 (MQ=255)
gaAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTgc > 1:5548295/1‑93 (MQ=255)
aCTTTCTGCACTTTACTCTGAGAAATGTAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTgcggc > 1:1400439/1‑93 (MQ=255)
tttCTGCACTTTACTCTGAGAAATGTAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGgcgc < 1:5076262/93‑1 (MQ=255)
cTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCatt < 2:3117712/93‑1 (MQ=255)
gCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCattat < 1:2769304/93‑1 (MQ=255)
aCTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTc < 1:4854565/93‑1 (MQ=255)
aCTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTc > 1:252385/1‑93 (MQ=255)
aCTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTc > 2:1168068/1‑93 (MQ=255)
cTTTACTCTGAGAAATGTAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCa < 1:5708554/93‑1 (MQ=255)
tttACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAg > 2:1368959/1‑93 (MQ=255)
tttACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAg > 2:6557544/1‑93 (MQ=255)
ttACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGc < 2:1783211/93‑1 (MQ=255)
tACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGct < 2:5468028/93‑1 (MQ=255)
aCTCTGAGAAATGTAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGctc > 1:2722064/1‑93 (MQ=255)
ctctGAGACATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGctct > 1:6452773/1‑93 (MQ=255)
ctctGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGctct < 1:2354050/93‑1 (MQ=255)
ctctGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGctct > 1:4912161/1‑93 (MQ=255)
tctGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGCTCtt > 1:1465859/1‑93 (MQ=255)
tctGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGCTCtt < 1:5178809/93‑1 (MQ=255)
ctGAGAAATGTAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGCTCTTc < 2:4320872/93‑1 (MQ=255)
tGAGAAATGTAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGCTCTTCg > 2:329924/1‑93 (MQ=255)
tGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGCTCTTCg > 2:579073/1‑93 (MQ=255)
tGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGCTCTTCg > 1:5660402/1‑93 (MQ=255)
gagaAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGCTCTTCGt > 2:52380/1‑93 (MQ=255)
gagaAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGCTCTTCGt < 1:4594338/93‑1 (MQ=255)
gaAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGCTCTTCGTTg < 2:5820144/93‑1 (MQ=255)
aaTGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGCTCTTCGTTGCt < 2:4552288/93‑1 (MQ=255)
aaTGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGCTCTTCGTTGCt > 1:3782638/1‑93 (MQ=255)
aaTGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGCTCTTCGTTGCt > 1:3597431/1‑93 (MQ=255)
aTGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGCTCTTCGTTGCta < 1:702034/93‑1 (MQ=255)
|
CTACGCGCTCTTTGGTTCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGTAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGCTCTTCGTTGCTATA > NC_000913/3465759‑3465942
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CCTACGCGCTCTTTGGTTCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGTAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGCTCTTCGTTGCTATAGC > NC_000913/3465758‑3465944
|
CCTACGCGCTCTTTGGTTCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGC < SRR4302547.4114067/94‑1 (MQ=60)
CTACGCGCTCTTTGGTTCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCA > SRR4302547.3432944/1‑94 (MQ=60)
CTACGCGCTCTTTGGTTCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCA < SRR4302547.5288651/94‑1 (MQ=60)
CTACGCGCTCTTTGGTTCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCA > SRR4302547.647623/1‑94 (MQ=60)
TACGCGCTCTTTGGTTCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGCGAAACTTTCTGCACTTTACTCTGAGAAATGCAG > SRR4302547.272245/1‑94 (MQ=60)
TACGCGCTCTTTGGTTCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAG > SRR4302547.3913901/1‑94 (MQ=60)
TACGCGCTCTTTGGTTCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAG > SRR4302547.4979436/1‑94 (MQ=60)
TACGCGCTCTTTGGTTCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAG < SRR4302547.4147697/94‑1 (MQ=60)
CGCGCTCTTTGGTTCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTT > SRR4302547.2304070/1‑94 (MQ=60)
CGCGCTCTTTGGTTCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTT < SRR4302547.5082800/94‑1 (MQ=60)
CGCGCTCTTTGGTTCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTT < SRR4302547.1080648/94‑1 (MQ=60)
GCTCTTTGGTTCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCAC > SRR4302547.6289204/1‑94 (MQ=60)
GCTCTTTGGTTCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCAC > SRR4302547.782626/1‑94 (MQ=60)
CCTCTTTGGTTCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCAC < SRR4302547.5734585/94‑1 (MQ=60)
CTCTTTGGTTCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGTAGTTCACA > SRR4302547.6234437/1‑94 (MQ=60)
CTCTTTGGTTCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACA > SRR4302547.5090882/1‑94 (MQ=60)
CTCTTTGGTTCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACA > SRR4302547.3069441/1‑94 (MQ=60)
CTCTTTGGTTCCGGCCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGTAGTTCACA < SRR4302547.4676037/94‑1 (MQ=60)
TTTTTGGTCCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACAC < SRR4302547.29962/94‑1 (MQ=60)
TCTTTGGTTCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACAC < SRR4302547.6609127/94‑1 (MQ=60)
CTTTGGTTCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGTAGTTCACACC > SRR4302547.3094102/1‑94 (MQ=60)
CTTTGGTTCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACC < SRR4302547.6750399/94‑1 (MQ=60)
TTTGGTTCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCG < SRR4302547.2780466/94‑1 (MQ=60)
TGGTTCCGNTNCAGTCAACAAAANNANGCNACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCNCACCGTT < SRR4302547.3053073/94‑1 (MQ=60)
TGGTTCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTT < SRR4302547.3825222/94‑1 (MQ=60)
TGTTCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTA > SRR4302547.5095952/1‑94 (MQ=60)
GGTTCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGTAGTTCACACCGTTA < SRR4302547.6118223/94‑1 (MQ=60)
GTTCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAA > SRR4302547.2866975/1‑94 (MQ=60)
GTTCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAA > SRR4302547.4399995/1‑94 (MQ=60)
TTCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAA > SRR4302547.4318491/1‑94 (MQ=60)
TCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGCAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAG > SRR4302547.1020214/1‑94 (MQ=60)
TCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAG < SRR4302547.3033069/94‑1 (MQ=60)
TCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAG < SRR4302547.5240499/94‑1 (MQ=60)
CGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGTAGTTCACACCGTTAAAGCG < SRR4302547.6576344/94‑1 (MQ=60)
CGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCG < SRR4302547.803614/94‑1 (MQ=60)
GGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGA > SRR4302547.2441357/1‑94 (MQ=60)
GGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGA < SRR4302547.3725110/94‑1 (MQ=60)
TCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAAT > SRR4302547.187577/1‑94 (MQ=60)
CCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATC < SRR4302547.2262750/94‑1 (MQ=60)
CAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCA < SRR4302547.2514900/94‑1 (MQ=60)
AGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAG > SRR4302547.3459043/1‑94 (MQ=60)
AGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAG > SRR4302547.678885/1‑94 (MQ=60)
GTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGTAGTTCACACCGTTAAAGCGAATCAGC > SRR4302547.5948929/1‑94 (MQ=60)
TCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCG < SRR4302547.3007490/94‑1 (MQ=60)
TCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCATTAAAGCGAATCAGCG < SRR4302547.2559678/94‑1 (MQ=60)
ACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTAT < SRR4302547.1701624/94‑1 (MQ=60)
AAAAACACGCCACGGGTTGCTGTCAGACGGAGAAACATTCTGCACTTAGCTATGAGAAAAGCAGTTCACACAGTTAAAGCGAATCAGCGTATCA < SRR4302547.6783422/94‑1 (MQ=60)
AAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGTAGTTCACACCGTTAAAGCGAATCAGCGTATCG > SRR4302547.6154433/1‑94 (MQ=60)
AAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGTAGTTCACACCGTTAAAGCGAATCAGCGTATCG > SRR4302547.1060620/1‑94 (MQ=60)
AAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCG < SRR4302547.3780685/94‑1 (MQ=60)
AAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGC > SRR4302547.1042471/1‑94 (MQ=60)
AAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGC > SRR4302547.6315644/1‑94 (MQ=60)
AAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGC > SRR4302547.4624865/1‑94 (MQ=60)
AAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCT < SRR4302547.5353910/94‑1 (MQ=60)
AAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCT > SRR4302547.5044296/1‑94 (MQ=60)
AACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGTAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTG < SRR4302547.6666705/94‑1 (MQ=60)
AACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGTAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTG < SRR4302547.6682825/94‑1 (MQ=60)
AACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTG > SRR4302547.1697289/1‑94 (MQ=60)
ACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGTAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGG < SRR4302547.1724394/94‑1 (MQ=60)
ACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCA < SRR4302547.3128384/94‑1 (MQ=60)
GCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATA < SRR4302547.1635844/94‑1 (MQ=60)
CCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGTAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAA < SRR4302547.3388483/94‑1 (MQ=60)
CCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAA > SRR4302547.116958/1‑94 (MQ=60)
CACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAA < SRR4302547.2183618/94‑1 (MQ=60)
ACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGTAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAG < SRR4302547.6202580/94‑1 (MQ=60)
GGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCG < SRR4302547.1485802/94‑1 (MQ=60)
GTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTT > SRR4302547.4123340/1‑94 (MQ=60)
TGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTC < SRR4302547.1354589/94‑1 (MQ=60)
TGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTC > SRR4302547.107330/1‑94 (MQ=60)
TCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCT < SRR4302547.6249987/94‑1 (MQ=60)
GCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCT < SRR4302547.3121993/94‑1 (MQ=60)
CTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTTGCATAAAGCGGTTCTG > SRR4302547.600205/1‑94 (MQ=60)
CTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTG < SRR4302547.6091858/94‑1 (MQ=60)
CTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTG > SRR4302547.2519754/1‑94 (MQ=60)
CTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTG < SRR4302547.5394973/94‑1 (MQ=60)
CTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTG > SRR4302547.6739219/1‑94 (MQ=60)
TGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGG < SRR4302547.3647059/94‑1 (MQ=60)
GTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGA > SRR4302547.1714599/1‑94 (MQ=60)
TCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGTAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGAT < SRR4302547.531446/94‑1 (MQ=60)
TCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGAT < SRR4302547.6113121/94‑1 (MQ=60)
CAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGTAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATT > SRR4302547.2263802/1‑94 (MQ=60)
CAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATT > SRR4302547.1053842/1‑94 (MQ=60)
CAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATT < SRR4302547.3037415/94‑1 (MQ=60)
AGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTA > SRR4302547.5639552/1‑94 (MQ=60)
AGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTA < SRR4302547.513665/94‑1 (MQ=60)
AGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTA < SRR4302547.2091416/94‑1 (MQ=60)
aaacGAGAAACTGTCGGCACTTTGCTCTGAGAAATGCCGTTCACACCGTTAAAGCGATTCAGAGTATCGCTGGCATAAGGCGTTTCTGccctag < SRR4302547.4838176/90‑7 (MQ=46)
GAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAA > SRR4302547.1272765/1‑94 (MQ=60)
GAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAA > SRR4302547.3430929/1‑94 (MQ=60)
AGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAAC > SRR4302547.3575738/1‑94 (MQ=60)
AGGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAAC > SRR4302547.4069660/1‑94 (MQ=60)
GGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACT < SRR4302547.3079909/94‑1 (MQ=60)
GGAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACT < SRR4302547.3298236/94‑1 (MQ=60)
GAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTG > SRR4302547.3882855/1‑94 (MQ=60)
GAGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTG < SRR4302547.4342827/94‑1 (MQ=60)
AGAAACTTTCTGCACTTTACTCTGAGAAATGTAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGC > SRR4302547.5612638/1‑94 (MQ=60)
AGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGC > SRR4302547.5662780/1‑94 (MQ=60)
AGAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGC > SRR4302547.1920272/1‑94 (MQ=60)
GAAACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCG < SRR4302547.961077/94‑1 (MQ=60)
AACTTTCTGCACTTTACTCTGAGAAATGTAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGC > SRR4302547.1428462/1‑94 (MQ=60)
AACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGC < SRR4302547.3857976/94‑1 (MQ=60)
ACTTTCTGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCG > SRR4302547.3366507/1‑94 (MQ=60)
TTTCTGCACTTTACTCTGAGAAATGTAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCA < SRR4302547.5180981/94‑1 (MQ=60)
TGCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTAT < SRR4302547.2789096/94‑1 (MQ=60)
GCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATT > SRR4302547.5148003/1‑94 (MQ=60)
GCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATT < SRR4302547.2824783/94‑1 (MQ=60)
GCACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATT > SRR4302547.4726675/1‑94 (MQ=60)
CACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTC > SRR4302547.257104/1‑94 (MQ=60)
CACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTC < SRR4302547.506692/94‑1 (MQ=60)
CACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTC > SRR4302547.4689111/1‑94 (MQ=60)
ACTTTACTCTGAGAAATGTAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAGGCGTTTCTGGATTAAACTGCGGCGCATTATTCA < SRR4302547.1417132/94‑1 (MQ=60)
ACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCA > SRR4302547.3907879/1‑94 (MQ=60)
ACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCA < SRR4302547.74172/94‑1 (MQ=60)
ACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCA < SRR4302547.5700932/94‑1 (MQ=60)
ACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCA < SRR4302547.4955146/94‑1 (MQ=60)
ACTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCA > SRR4302547.1360339/1‑94 (MQ=60)
CTTTACTCTGAGAAATGTAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAG < SRR4302547.5826466/94‑1 (MQ=60)
CTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAG < SRR4302547.4260000/94‑1 (MQ=60)
CTTTACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAG < SRR4302547.4329212/94‑1 (MQ=60)
TACTCTGAGAAATGTAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGCTC > SRR4302547.2776727/1‑94 (MQ=60)
TACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGCTC < SRR4302547.544316/94‑1 (MQ=60)
TACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGCTC < SRR4302547.2348090/94‑1 (MQ=60)
ACTCTGAGACATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGCTCT > SRR4302547.6587194/1‑94 (MQ=60)
ACTCTGAGAAATGTAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGCTCT < SRR4302547.995880/94‑1 (MQ=60)
ACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGCTCT < SRR4302547.943838/94‑1 (MQ=60)
ACTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGCTCT > SRR4302547.5013881/1‑94 (MQ=60)
CTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGCTCTT < SRR4302547.2401755/94‑1 (MQ=60)
CTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGCTCTT > SRR4302547.1495145/1‑94 (MQ=60)
CTCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGCTCTT < SRR4302547.18886/94‑1 (MQ=60)
TCTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGCTCTTC < SRR4302547.5285408/94‑1 (MQ=60)
CTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGCTCTTCG > SRR4302547.5995605/1‑94 (MQ=60)
CTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGCTCTTCG > SRR4302547.5777245/1‑94 (MQ=60)
CTGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGCTCTTCG < SRR4302547.6145073/94‑1 (MQ=60)
TGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGCTCTTCGT < SRR4302547.4738686/94‑1 (MQ=60)
TGAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGCTCTTCGT > SRR4302547.3236112/1‑94 (MQ=60)
GAGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGCTCTTCGTT < SRR4302547.4689405/94‑1 (MQ=60)
AGAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGCTCTTCGTTG > SRR4302547.5302987/1‑94 (MQ=60)
GAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGaaacgctttat < SRR4302547.4407590/94‑12 (MQ=60)
GAAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGCTCTTCGTTGC > SRR4302547.4010414/1‑94 (MQ=60)
AAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGCTCTTCGTTGCT > SRR4302547.3859769/1‑94 (MQ=60)
AAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGCTCTTCGTTGCT > SRR4302547.3670797/1‑94 (MQ=60)
AAATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGCTCTTCGTTGCT > SRR4302547.994150/1‑94 (MQ=60)
AATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGCTCTTCGTTGCTA > SRR4302547.2513687/1‑94 (MQ=60)
ATGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGCTCTTCGTTGCTAT < SRR4302547.715013/94‑1 (MQ=60)
TGTAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGCTCTTCGTTGCTATA > SRR4302547.5791987/1‑94 (MQ=60)
TGTAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGCTCTTCGTTGCTATA < SRR4302547.3387860/94‑1 (MQ=60)
TGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGCTCTTCGTTGCTATA > SRR4302547.6029513/1‑94 (MQ=60)
TGCAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGCCGCATTATTCACCTCTTCGTTGCTATA < SRR4302547.1773094/94‑1 (MQ=60)
CAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGCTCTTCGTTGCTATAGC < SRR4302547.1558182/94‑1 (MQ=60)
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CCTACGCGCTCTTTGGTTCCGGTCCAGTCAACAAAAACACGCCACGGGTTGCTGTCAGAAGGAGAAACTTTCTGCACTTTACTCTGAGAAATGTAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGCTCTTCGTTGCTATAGC > NC_000913/3465758‑3465944
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
