Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
593 |
264.2 |
13311096 |
97.8% |
13018251 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,698,071 |
T→C |
intergenic (+549/‑121) |
yhjU → / → yhjV |
hypothetical protein/putative transporter protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,698,071 | 0 | T | C | 89.2%
| 763.7
/ 67.2
| 268 | intergenic (+549/‑121) | yhjU/yhjV | hypothetical protein/putative transporter protein |
| Reads supporting (aligned to +/- strand): ref base T (13/16); new base C (128/111); total (141/127) |
| Fisher's exact test for biased strand distribution p-value = 4.33e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 282 total aligned reads displayed.
TCTTTATTTGCAATAGTTGCAGTTCATATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCTCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTGCGCAAGAGAAACTGGGTTTATTCATTTTTGCG > NC_000913/3697979‑3698163
|
tCTTTATTTGCAATAGTTGCAGTTCATATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCt < 1:5299487/93‑1 (MQ=255)
tttGCAATAGTTGCAGTTCATATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCTCCCCAg < 2:4651649/93‑1 (MQ=255)
tttGCAATAGTTGCAGTTCATATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAg > 1:1018696/1‑93 (MQ=255)
tttGCAATAGTTGCAGTTCATATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAg > 2:3836344/1‑93 (MQ=255)
tttGCAATAGTTGCAGTTCATATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAg > 2:1985063/1‑93 (MQ=255)
tttGCAATAGTTGCAGTTCATATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAg > 2:1431821/1‑93 (MQ=255)
tttGCAATAGTTGCAGTTCATATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAg < 1:3231015/93‑1 (MQ=255)
cAATAGTTGCAGTTCATATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGaa < 2:5864783/93‑1 (MQ=255)
cAATAGTTGCAGTTCATATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGaa > 1:879177/1‑93 (MQ=255)
aaTAGTTGCAGTTCATATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAAt > 1:1338098/1‑93 (MQ=255)
aaTAGTTGCAGTTCATATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAAt > 2:2520802/1‑93 (MQ=255)
aTAGTTGCAGTTCATATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATc > 1:5596527/1‑93 (MQ=255)
aTAGTTGCAGTTCATATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATc < 1:2363559/93‑1 (MQ=255)
tAGTTGCAGTTCATATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCt < 2:7143/93‑1 (MQ=255)
tAGTTGCAGTTCATATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCt > 1:2968183/1‑93 (MQ=255)
tAGTTGCAGTTCATATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCt > 2:1014054/1‑93 (MQ=255)
ttGCAGTTCATATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGtt < 2:1292306/93‑1 (MQ=255)
ttGCAGTTCATATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGtt < 2:1594506/93‑1 (MQ=255)
ttGCAGTTCATATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGtt < 2:6094563/93‑1 (MQ=255)
ttGCAGTTCATATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGtt > 2:2636231/1‑93 (MQ=255)
ttGCAGTTCATATCAGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGtt > 1:4053376/1‑93 (MQ=255)
aGTTCATATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCt < 1:1672217/93‑1 (MQ=255)
gTTCATATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTc > 1:4846346/1‑93 (MQ=255)
gTTCATATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTc > 2:3069470/1‑93 (MQ=255)
gTTCATATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTc > 2:5928416/1‑93 (MQ=255)
tCATATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCAt < 1:6207491/93‑1 (MQ=255)
tCATATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCAt < 1:4667439/93‑1 (MQ=255)
cATATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCAtt < 1:2048072/93‑1 (MQ=255)
cATATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCAtt > 2:3457662/1‑93 (MQ=255)
atatCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCAttt > 2:406354/1‑93 (MQ=255)
tatCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCAtttt > 1:6295042/1‑93 (MQ=255)
tatCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCAtttt < 2:6361073/93‑1 (MQ=255)
tatCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCAtttt > 2:3381445/1‑93 (MQ=255)
tatCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCAtttt < 1:4898413/93‑1 (MQ=255)
tatCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCAtttt < 2:4401712/93‑1 (MQ=255)
atCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCAttttt > 2:3648517/1‑93 (MQ=255)
atCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCAttttt > 1:1574436/1‑93 (MQ=255)
atCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCAttttt > 2:3540260/1‑93 (MQ=255)
atCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCAttttt > 2:4823683/1‑93 (MQ=255)
cGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTAc > 2:5087647/1‑93 (MQ=255)
gggCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACa < 2:6647033/93‑1 (MQ=255)
gCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATa > 1:457512/1‑93 (MQ=255)
cTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATAc < 1:4144169/93‑1 (MQ=255)
cTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATAc > 2:1110588/1‑93 (MQ=255)
tGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACt < 2:4612923/93‑1 (MQ=255)
tGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACt > 1:6610667/1‑93 (MQ=255)
tGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACt < 2:6461367/93‑1 (MQ=255)
aCTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGc < 1:3677405/93‑1 (MQ=255)
ccAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTa < 1:18728/93‑1 (MQ=255)
cAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCTCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTAt > 2:2824076/1‑93 (MQ=255)
cAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTAt > 1:4314430/1‑93 (MQ=255)
cAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTAt > 1:2586013/1‑93 (MQ=255)
aGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTAtt < 2:2680314/93‑1 (MQ=255)
aGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTAtt > 1:735127/1‑93 (MQ=255)
gACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTc > 1:1475312/1‑93 (MQ=255)
cTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGa < 2:1056047/93‑1 (MQ=255)
tGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGAc < 1:904337/93‑1 (MQ=255)
tGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGAc < 1:2155620/93‑1 (MQ=255)
tGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGAc < 2:3197109/93‑1 (MQ=255)
tGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGAc > 2:2731760/1‑93 (MQ=255)
gTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACtt > 1:4805052/1‑93 (MQ=255)
aaTGCGCAATTTTGTAGACTTGCGCCTCCTCGCGTCCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCAcc < 1:3828921/93‑1 (MQ=255)
aaTGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCAcc < 2:2934141/93‑1 (MQ=255)
aaTGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCAcc > 1:386697/1‑93 (MQ=255)
aaTGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCAcc > 1:6082283/1‑93 (MQ=255)
aTGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCt < 1:4457345/93‑1 (MQ=255)
gcgcAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCAACCTGt > 1:6524556/1‑93 (MQ=255)
gcAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTg < 2:3026879/93‑1 (MQ=255)
aaTTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTgcg > 2:400923/1‑93 (MQ=255)
aaTTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTgcg > 1:3122453/1‑93 (MQ=255)
aTTTTGTAGAATTGCGCCTCCTCGCGACCTCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTgcgc < 2:2309563/93‑1 (MQ=255)
ttttGTAGAATTGCGCCTCCTCGCGTCCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTGCGCa < 2:5590692/93‑1 (MQ=255)
ttGTAGAATTGCGCCTCCTCGCGACCTCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTGCGCAag < 2:3235247/93‑1 (MQ=255)
ttGTAGAATTGCGCCTCCTCGCGACCTCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTGCGCAag > 1:1603600/1‑93 (MQ=255)
ttGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTGCGCAag > 2:5345066/1‑93 (MQ=255)
tGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTGCGCAaga < 1:1114836/93‑1 (MQ=255)
aTTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTGCGCAAGAGAAACt < 1:1763395/93‑1 (MQ=255)
aTTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTGCGCAAGAGAAACt > 1:2736379/1‑93 (MQ=255)
aTTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTGCGCAAGAGAAACt > 1:6174924/1‑93 (MQ=255)
ttGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTGCGCAAGAGAAACTg < 2:1750151/93‑1 (MQ=255)
ttGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTGCGCAAGAGAAACTg < 1:5929633/93‑1 (MQ=255)
gcgcCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTGCGCAAGAGAAACTggg < 2:4514257/93‑1 (MQ=255)
gcgcCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTGCGCAAGAGAAACTggg > 1:3470771/1‑93 (MQ=255)
cgcCTCCTCGCGACCTCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTGCGCAAGAGAAACTGGGt < 1:4728327/93‑1 (MQ=255)
cgcCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTGCGCAAGAGAAACTGGGt < 1:395442/93‑1 (MQ=255)
gcCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTGCGCAAGAGAAACTGGGtt > 2:6227927/1‑93 (MQ=255)
cctcctCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTGCGCAAGAGAAACTGGGttt < 2:4304270/93‑1 (MQ=255)
tcctcGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTGCGCAAGAGAAACTGGGTTTAt > 1:1959385/1‑93 (MQ=255)
tcctcGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTGCGCAAGAGAAACTGGGTTTAt > 2:5463478/1‑93 (MQ=255)
cctcGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTGCGCAAGAGAAACTGGGTTTAtt < 1:5730070/93‑1 (MQ=255)
cctcGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTGCGCAAGAGAAACTGGGTTTAtt < 2:5721573/93‑1 (MQ=255)
ctcGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTGCGCAAGAGAAACTGGGTTTATTc > 2:3416952/1‑93 (MQ=255)
ctcGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTGCGCAAGAGAAACTGGGTTTATTc > 1:5058259/1‑93 (MQ=255)
tcGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTGCGCAAGAGAAACTGGGTTTATTCa < 2:3891100/93‑1 (MQ=255)
tcGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTGCGCAAGAGAAACTGGGTTTATTCa < 2:814261/93‑1 (MQ=255)
cgcgACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTGCGCAAGAGAAACTGGGTTTATTCAt < 1:6431647/93‑1 (MQ=255)
gcgACCTCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTGCGCAAGAGAAACTGGGTTTATTCAtt < 1:5893063/93‑1 (MQ=255)
cgACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTGCGCAAGAGAAACTGGGTTTATTCAttt < 2:1916039/93‑1 (MQ=255)
aCCTCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTGCGCAAGAGAAACTGGGTTTATTCAttttt > 1:1227707/1‑93 (MQ=255)
aCCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTGCGCAAGAGAAACTGGGTTTATTCAttttt > 2:4135618/1‑93 (MQ=255)
|
TCTTTATTTGCAATAGTTGCAGTTCATATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCTCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTGCGCAAGAGAAACTGGGTTTATTCATTTTTGCG > NC_000913/3697979‑3698163
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TTCTTTATTTGCAATAGTTGCAGTTCATATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCTCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTGCGCAAGAGAAACTGGGTTTATTCATTTTTGC > NC_000913/3697978‑3698162
|
TTCTTTATTTGCAATAGTTGCAGTTCATATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCT < SRR4302547.32692/94‑1 (MQ=60)
TTCTTTATTTGCAATAGTTGCAGTTCATATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCC > SRR4302547.1979922/1‑94 (MQ=60)
TCTTTATTTGCAATAGTTGCAGTTCATATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCTC < SRR4302547.5408834/94‑1 (MQ=60)
TCTTTATTTGCAATAGTTGCAGTTCATATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCC > SRR4302547.335993/1‑94 (MQ=60)
TCTTTATTTGCAATAGTTGCAGTTCATATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCC < SRR4302547.3682567/94‑1 (MQ=60)
TCTTTATTTGCAATAGTTGCAGTTCATATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCC < SRR4302547.6369436/94‑1 (MQ=60)
TTTATTTGCAATAGTTGCAGTTCATATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCC > SRR4302547.4260797/1‑94 (MQ=60)
TTTATTTGCAATAGTTGCAGTTCATATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCC < SRR4302547.3257466/94‑1 (MQ=60)
TTATTTGCAATAGTTGCAGTTCATATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCC < SRR4302547.4655795/94‑1 (MQ=60)
TATTTGCAATAGTTGCAGTTCATATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCTCCCCA < SRR4302547.1419989/94‑1 (MQ=60)
ATTTGCAATAGTTGCAGTTCATATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAG > SRR4302547.1038653/1‑94 (MQ=60)
ATTTGCAATAGTTGCAGTTCATATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAG > SRR4302547.1149793/1‑94 (MQ=60)
TTTGCAATAGTTGCAGTTCATATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCTCCCCAGT < SRR4302547.1481285/94‑1 (MQ=60)
TTTGCAATAGTTGCAGTTCATATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGT < SRR4302547.3295500/94‑1 (MQ=60)
TGCAATAGTTGCAGTTCATATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGA > SRR4302547.5937062/1‑94 (MQ=60)
GCAATAGTTGCAGTTCATATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAA > SRR4302547.896069/1‑94 (MQ=60)
CAATAGTTGCAGTTCATATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAAT > SRR4302547.1364993/1‑94 (MQ=60)
AATAGTTGCAGTTCATATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATC > SRR4302547.4681995/1‑94 (MQ=60)
AATAGTTGCAGTTCATATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATC > SRR4302547.2417989/1‑94 (MQ=60)
AATAGTTGCAGTTCATATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATC > SRR4302547.5711982/1‑94 (MQ=60)
ATAGTTGCAGTTCATATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCTCCCCAGTGAATCT > SRR4302547.2561998/1‑94 (MQ=60)
ATAGTTGCAGTTCATATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCT < SRR4302547.2411472/94‑1 (MQ=60)
ATAGTTGCAGTTCATATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCT > SRR4302547.3027260/1‑94 (MQ=60)
ATAGTTGCAATTCATATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCT > SRR4302547.6634642/1‑94 (MQ=60)
TAGTTGCAGTTCATATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTG > SRR4302547.4787075/1‑94 (MQ=60)
TAGTTGCAGTTCATATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTG < SRR4302547.4917329/94‑1 (MQ=60)
GTTGCAGTTCATATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTT < SRR4302547.6428307/94‑1 (MQ=60)
GTTGCAGTTCATATCAGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTT > SRR4302547.4135694/1‑94 (MQ=60)
TTGCAGTTCATATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTG < SRR4302547.204897/94‑1 (MQ=60)
TTGCAGTTCATATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTG < SRR4302547.5217076/94‑1 (MQ=60)
TTGCAGTTCATATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTG < SRR4302547.920632/94‑1 (MQ=60)
TGCAGTTCATATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCTCCCCAGTGAATCTGTTGC < SRR4302547.2959074/94‑1 (MQ=60)
TGCAGTTCATATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGC > SRR4302547.905893/1‑94 (MQ=60)
TGCAGTTCATATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGC > SRR4302547.4068292/1‑94 (MQ=60)
CAGTTCATATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCT < SRR4302547.1633285/94‑1 (MQ=60)
CAGTTCATATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCT > SRR4302547.5918220/1‑94 (MQ=60)
AGTTCATATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACGCCCCCAGTGAATCTGTTGCCTC > SRR4302547.3103869/1‑94 (MQ=60)
AGTTCATATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTC > SRR4302547.4946779/1‑94 (MQ=60)
AGTTCATATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTC < SRR4302547.1705160/94‑1 (MQ=60)
AGTTCATATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTC > SRR4302547.5580809/1‑94 (MQ=60)
TTCATATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCAT < SRR4302547.635719/94‑1 (MQ=60)
TCATATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATT < SRR4302547.6336381/94‑1 (MQ=60)
TCATATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATT > SRR4302547.6031198/1‑94 (MQ=60)
TCATATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATT > SRR4302547.4512645/1‑94 (MQ=60)
TCATATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATT < SRR4302547.4764098/94‑1 (MQ=60)
CATATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTTTTGCCTCCTTT > SRR4302547.5504798/1‑94 (MQ=60)
CATATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTT < SRR4302547.2088921/94‑1 (MQ=60)
ATATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCTCCCCAGTGAATCTGTTGCCTCATTTT > SRR4302547.733171/1‑94 (MQ=60)
ATATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTT > SRR4302547.1789987/1‑94 (MQ=60)
ATATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTT > SRR4302547.6175026/1‑94 (MQ=60)
ATATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTT > SRR4302547.6425902/1‑94 (MQ=60)
ATATCCGGGCTGACTCCAGACTGGCAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTTGCGACCGCCCCAGTGTATCTGTTGCCTCATTTT > SRR4302547.3456366/1‑94 (MQ=60)
TATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTT > SRR4302547.3951793/1‑94 (MQ=60)
TATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTT > SRR4302547.1605764/1‑94 (MQ=60)
TATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTT < SRR4302547.4999850/94‑1 (MQ=60)
ATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTT > SRR4302547.424352/1‑94 (MQ=60)
ATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTT > SRR4302547.6196297/1‑94 (MQ=60)
CGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACT > SRR4302547.1640354/1‑94 (MQ=60)
GGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCTCCCCAGTGAATCTGTTGCCTCATTTTTTACAT < SRR4302547.1007874/94‑1 (MQ=60)
GGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACAT > SRR4302547.296729/1‑94 (MQ=60)
GTCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATA < SRR4302547.4949125/94‑1 (MQ=60)
GGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATA > SRR4302547.465976/1‑94 (MQ=60)
GCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATAC < SRR4302547.350586/94‑1 (MQ=60)
GCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATAC < SRR4302547.794862/94‑1 (MQ=60)
GCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATAC < SRR4302547.1826029/94‑1 (MQ=60)
GCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATAC < SRR4302547.2664437/94‑1 (MQ=60)
CTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCTCCCCAGTGAATCTGTTGCCTCATTTTTTACATACT < SRR4302547.5819279/94‑1 (MQ=60)
CTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACT > SRR4302547.6329126/1‑94 (MQ=60)
CTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACT > SRR4302547.6748264/1‑94 (MQ=60)
CTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACT < SRR4302547.4228510/94‑1 (MQ=60)
CTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACT < SRR4302547.4874367/94‑1 (MQ=60)
CTGACTCAAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACT < SRR4302547.3920965/94‑1 (MQ=60)
TGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTG > SRR4302547.6285544/1‑94 (MQ=60)
ACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCTCCCCAGTGAATCTGTTGCCTCATTTTTTACGTACTGCG > SRR4302547.854160/1‑94 (MQ=60)
ACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCG < SRR4302547.3752451/94‑1 (MQ=60)
CCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTAT > SRR4302547.2638192/1‑94 (MQ=60)
CCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTAT > SRR4302547.1770671/1‑94 (MQ=60)
CCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTAT > SRR4302547.4403215/1‑94 (MQ=60)
CCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTAT < SRR4302547.19087/94‑1 (MQ=60)
CAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATT > SRR4302547.748873/1‑94 (MQ=60)
AGCCTGGTAGTGAAATGCTCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATGCTGCGTATTC < SRR4302547.3881591/94‑1 (MQ=60)
AGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTC > SRR4302547.1504780/1‑94 (MQ=60)
GACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCG < SRR4302547.4122231/94‑1 (MQ=60)
CTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGAC > SRR4302547.6310440/1‑94 (MQ=60)
CTGGTAGTGAAATGCGCAAGTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGAC < SRR4302547.2067515/94‑1 (MQ=60)
TGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACT < SRR4302547.2198675/94‑1 (MQ=60)
TGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACT < SRR4302547.921756/94‑1 (MQ=60)
TGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTATTGCCTCATTTTTTACATACTGCGTATTCGTCT > SRR4302547.1988083/1‑94 (MQ=60)
GGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTT > SRR4302547.4904634/1‑94 (MQ=60)
TAGTGAAATGCGCAATTTTGTAGAATTGCGGCTCCTCGCGACCTACCCAGTGAATCTGTTGCCTCCGTTTTTACATACTGCGTATTCGACTTCT > SRR4302547.4142495/1‑94 (MQ=60)
TAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCT < SRR4302547.672043/94‑1 (MQ=60)
TAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCT < SRR4302547.672041/94‑1 (MQ=60)
TAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCT > SRR4302547.239089/1‑94 (MQ=60)
TGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCA > SRR4302547.3919704/1‑94 (MQ=60)
AAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACC > SRR4302547.393867/1‑94 (MQ=60)
AAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACC > SRR4302547.6208474/1‑94 (MQ=60)
AATGCGCAATTTTGTAGACTTGCGCCTCCTCGCGTCCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCT < SRR4302547.3906910/94‑1 (MQ=60)
AATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCT < SRR4302547.1592483/94‑1 (MQ=60)
ATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTG < SRR4302547.4549471/94‑1 (MQ=60)
TGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCAACCTGT > SRR4302547.6660384/1‑94 (MQ=60)
CGCAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTG < SRR4302547.506478/94‑1 (MQ=60)
CATTTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATGCTGCGTATTCGACTTCTCCTCCTGTTGCG < SRR4302547.43499/94‑1 (MQ=60)
CAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTGCG > SRR4302547.4984337/1‑94 (MQ=60)
CAATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTGCG > SRR4302547.3184379/1‑94 (MQ=60)
AATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTGCGC > SRR4302547.4213304/1‑94 (MQ=60)
AATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTGCGC < SRR4302547.4716585/94‑1 (MQ=60)
AATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTGCGC > SRR4302547.4187931/1‑94 (MQ=60)
ATTTTGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTGCGCA > SRR4302547.3737450/1‑94 (MQ=60)
TTTGGAAGAATTGGGCCCCCTGGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTGCGCAA < SRR4302547.511519/94‑1 (MQ=60)
TTTGTAGAATTGCGCCTCCTCGCGACCTCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTGCGCAAG > SRR4302547.1635407/1‑94 (MQ=60)
tggagaatgtCGCCTCCTCGCGACCTCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTGCGCAAGAG < SRR4302547.4781407/84‑1 (MQ=60)
TGTAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTGCGCAAGAG < SRR4302547.1137283/94‑1 (MQ=60)
GTAGAATTGCGCCTCCTCGCGACCTCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTGCGCAAGAGA > SRR4302547.1262123/1‑94 (MQ=60)
TAGAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTGCGCAAGAGAA < SRR4302547.6237983/94‑1 (MQ=60)
GAATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTGCGCAAGAGAAAC < SRR4302547.2638793/94‑1 (MQ=60)
AATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTGCGCAAGAGAAACT < SRR4302547.184453/94‑1 (MQ=60)
AATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTGCGCAAGAGAAACT > SRR4302547.2099156/1‑94 (MQ=60)
AATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTGCGCAAGAGAAACT > SRR4302547.2791293/1‑94 (MQ=60)
AATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTGCGCAAGAGAAACT > SRR4302547.6303096/1‑94 (MQ=60)
ATTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTGCGCAAGAGAAACTG < SRR4302547.1798372/94‑1 (MQ=60)
TTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTGCGCAAGAGAAACTGG < SRR4302547.92822/94‑1 (MQ=60)
TTGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTGCGCAAGAGAAACTGG < SRR4302547.6052564/94‑1 (MQ=60)
TGCGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTGCGCAAGAGAAACTGGG > SRR4302547.3541554/1‑94 (MQ=60)
TGCCCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTGCGCAAGAGAAACTGGG < SRR4302547.1107264/94‑1 (MQ=60)
CGCCTCCTCGCGACCTCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTGCGCAAGAGAAACTGGGTT < SRR4302547.4826307/94‑1 (MQ=60)
CGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTGCGCAAGAGAAACTGGGTT < SRR4302547.402789/94‑1 (MQ=60)
CGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTGCGCAAGAGAAACTGGGTT < SRR4302547.5321782/94‑1 (MQ=60)
CGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTGCGCAAGAGAAACTGGGTT > SRR4302547.126050/1‑94 (MQ=60)
CGCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTGCGCAAGAGAAACTGGGTT > SRR4302547.1540274/1‑94 (MQ=60)
GCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTGCGCAAGAGAAACTGGGTTT < SRR4302547.3805109/94‑1 (MQ=60)
GCCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTGCGCAAGAGAAACTGGGTTT > SRR4302547.4487611/1‑94 (MQ=60)
CCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTGCGCAAGAGAAACTGGGTTTA > SRR4302547.3292192/1‑94 (MQ=60)
CCTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTGCGCAAGAGAAACTGGGTTTA < SRR4302547.6363171/94‑1 (MQ=60)
CTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTGCGCAAGAGAAACTGGGTTTAT > SRR4302547.71042/1‑94 (MQ=60)
CTCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTGCGCAAGAGAAACTGGGTTTAT > SRR4302547.1998282/1‑94 (MQ=60)
TCCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTGCGCAAGAGAAACTGGGTTTATT > SRR4302547.2317181/1‑94 (MQ=60)
TCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTGCGCAAGAGAAACTGGGTTTATTC > SRR4302547.5162650/1‑94 (MQ=60)
CCTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTGCGCAAGAGAAACTGGGTTTATTC < SRR4302547.5848452/94‑1 (MQ=60)
CTCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTGCGCAAGAGAAACTGGGTTTATTCA > SRR4302547.4874232/1‑94 (MQ=60)
TCGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTGCGCAAGAGAAACTGGGTTTATTCAT < SRR4302547.6537762/94‑1 (MQ=60)
CGCGACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTGCGCAAGAGAAACTGGGTTTATTCATT < SRR4302547.6565710/94‑1 (MQ=60)
GCGACCTCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTGCGCAAGAGAAACTGGGTTTATTCATTT < SRR4302547.6015071/94‑1 (MQ=60)
CGACCTCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTGCGCAAGAGAAACTGGGTTTATTCATTTT < SRR4302547.4907590/94‑1 (MQ=60)
GACCTCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTGCGCAAGAGAAACTGGGTTTATTCATTTTT > SRR4302547.1252475/1‑94 (MQ=60)
GACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTGCGCAAGAGAAACTGGGTTTATTCATTTTT > SRR4302547.1947715/1‑94 (MQ=60)
GACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTGCGCAAGAGAAACTGGGTTTATTCATTTTT < SRR4302547.1187028/94‑1 (MQ=60)
GACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTGCGCAAGAGAAACTGGGTTTATTCATTTTT > SRR4302547.3625732/1‑94 (MQ=60)
GACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTGCGCAAGAGAAACTGGGATTATTCATTTTT > SRR4302547.5781270/1‑94 (MQ=60)
ACCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTGCGCAAGAGAAACTGGGTTTATTCATTTTTG < SRR4302547.1646981/94‑1 (MQ=60)
CCCCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTGCGCAAGAGAAACTGGGTTTATTCATTTTTGC < SRR4302547.6758686/94‑1 (MQ=60)
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TTCTTTATTTGCAATAGTTGCAGTTCATATCCGGGCTGACTCCAGACTGGTAGTGAAATGCGCAATTTTGTAGAATTGCGCCTCCTCGCGACCTCCCCAGTGAATCTGTTGCCTCATTTTTTACATACTGCGTATTCGACTTCTCCACCTGTTGCGCAAGAGAAACTGGGTTTATTCATTTTTGC > NC_000913/3697978‑3698162
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
