Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
593 |
264.2 |
13311096 |
97.8% |
13018251 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,715,348 |
A→G |
D141G (GAC→GGC) |
yiaE → |
putative dehydrogenase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,715,348 | 0 | A | G | 86.2%
| 779.7
/ 108.4
| 298 | D141G (GAC→GGC) | yiaE | putative dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base A (21/20); new base G (119/138); total (140/158) |
| Fisher's exact test for biased strand distribution p-value = 6.15e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.34e-01 |
Only 100 of 310 total aligned reads displayed.
CTGATGGCGCTGGTGTTGTCTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGACTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCATGGCGCTGGCACAACGTGCGCACTTTGGCT > NC_000913/3715257‑3715440
|
cTGATGGCGCTGGTGTTGTCTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGAc > 1:5857186/1‑93 (MQ=255)
tGATGGCGCTGGTGTTGTCTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCt > 1:4216660/1‑93 (MQ=255)
tGATGGCGCTGGTGTTGTCTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCt < 2:5368732/93‑1 (MQ=255)
gATGGCGCTGGTGTTGTCTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTg > 1:6637554/1‑93 (MQ=255)
gATGGCGCTGGTGTTGTCTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTg < 2:6159259/93‑1 (MQ=255)
aTGGCGCTGGTGTTGTCTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTgg > 2:1682085/1‑93 (MQ=255)
aTGGCGCTGGTGTTGTCTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGACTgg < 1:4345739/93‑1 (MQ=255)
gcgcTGGTGTTGTCTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTAc < 2:2054598/93‑1 (MQ=255)
gcgcTGGTGTTGTCTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTAc < 1:5313942/93‑1 (MQ=255)
gcgcTGGTGTTGTCTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTAc < 1:5960294/93‑1 (MQ=255)
gcTGGTGTTGTCTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGACTGGTACgg > 1:2892781/1‑93 (MQ=255)
cTGGTGTTGTCTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGc < 2:374296/93‑1 (MQ=255)
ggTGTTGTCTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCAc < 1:429001/93‑1 (MQ=255)
gtgtTGTCTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAAGGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACt < 1:1858224/93‑1 (MQ=255)
gttgtCTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGa < 2:624796/93‑1 (MQ=255)
ttgtCTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGACTGGTACGGCACTGAc < 1:5383056/93‑1 (MQ=255)
gtCTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGACTGGTACGGCACTGACGt < 1:1606748/93‑1 (MQ=255)
ccGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGTCCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCAcc < 2:3566154/93‑1 (MQ=255)
gCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCAccca > 1:4732135/1‑91 (MQ=255)
gCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCAt > 2:4748331/1‑93 (MQ=255)
gCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCAt > 1:3123958/1‑93 (MQ=255)
cgcgtcgGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATa < 1:1407024/91‑1 (MQ=255)
tcgtcgGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATaa > 1:4485339/1‑93 (MQ=255)
cgtcgGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATaaa > 2:2869459/1‑93 (MQ=255)
tcgGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAac < 1:4030025/93‑1 (MQ=255)
ggTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGACTGGTACGGCACTGACGTTCACCATAAAACACt > 2:5605505/1‑93 (MQ=255)
gTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTg < 1:239266/93‑1 (MQ=255)
gTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTg > 2:4417459/1‑93 (MQ=255)
gTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTg > 2:1467457/1‑93 (MQ=255)
tgGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCa < 2:780362/93‑1 (MQ=255)
tgGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCa < 2:4163384/93‑1 (MQ=255)
gAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCAtt < 2:4547623/93‑1 (MQ=255)
gAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCAtt > 2:2013485/1‑93 (MQ=255)
gAGGGAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCAtt < 1:1341332/93‑1 (MQ=255)
aGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTg > 2:2397907/1‑93 (MQ=255)
gTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTc > 1:213456/1‑93 (MQ=255)
aGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCgg < 2:4251908/93‑1 (MQ=255)
aGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCgg < 1:2338941/93‑1 (MQ=255)
gCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCggg > 2:6450481/1‑93 (MQ=255)
cAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCCCTGACGTTCACCATAAAACACTGGGCATTGTCGGGa < 2:120429/93‑1 (MQ=255)
aGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGAt < 1:3213430/93‑1 (MQ=255)
aGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTAGGCATTGTCGTGag > 1:2586400/1‑92 (MQ=255)
gAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGCTg > 2:1013044/1‑93 (MQ=255)
gAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATg < 1:2049433/93‑1 (MQ=255)
gAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATg > 1:3428438/1‑93 (MQ=255)
gAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATg < 1:3578324/93‑1 (MQ=255)
aaCGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATgg > 1:3902734/1‑93 (MQ=255)
aaCGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATgg < 2:1315098/93‑1 (MQ=255)
cGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGa > 2:2236659/1‑93 (MQ=255)
gggTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGAc < 2:72917/93‑1 (MQ=255)
gggTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGAc < 2:3021342/93‑1 (MQ=255)
gggTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGAc > 2:5135943/1‑93 (MQ=255)
gggTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGAc < 1:1132791/93‑1 (MQ=255)
ggTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACg > 2:4957302/1‑93 (MQ=255)
gTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACgg < 2:3503299/93‑1 (MQ=255)
gTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACgg > 1:2517069/1‑93 (MQ=255)
tAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGa < 1:2717662/93‑1 (MQ=255)
aaaaGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCTTTGTCGGGATGGGACGGAt < 1:6497823/93‑1 (MQ=255)
aaaaGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGAt < 1:1778733/93‑1 (MQ=255)
aaaaGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGAt < 1:6342434/93‑1 (MQ=255)
ataGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATc < 1:6272129/91‑1 (MQ=255)
aaaGCAGGCGAATGGACCGCGAGCATAGGCCCGGACTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATc < 2:4010593/93‑1 (MQ=255)
aGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCAt > 2:2903633/1‑93 (MQ=255)
ggCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCATg > 2:4098691/1‑93 (MQ=255)
ggCGAATGGACCGCGAGCATAGGCCCGGACTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCATg > 2:1113291/1‑93 (MQ=255)
gCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCATgg < 1:3364327/93‑1 (MQ=255)
gAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCATGgcg > 1:4862921/1‑93 (MQ=255)
gAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCATGgcg > 1:373557/1‑93 (MQ=255)
gAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCATGgcg > 1:771810/1‑93 (MQ=255)
gAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCATGgcg > 1:6084985/1‑93 (MQ=255)
aaTGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCATGgcgc < 1:5092457/93‑1 (MQ=255)
aTGGACCGCGGGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGAGGGGACGGATCGGCATGGctct < 1:1565155/93‑1 (MQ=255)
ggACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCCGCATGGCGCTgg > 2:5998264/1‑93 (MQ=255)
gACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCGTGGCGCTGGc > 1:3292036/1‑93 (MQ=255)
gACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCATGGCGCTGGc < 1:704128/93‑1 (MQ=255)
gACCGCGAGCATAGGCCCGGACTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCATGGCGCTGGc > 1:5496651/1‑93 (MQ=255)
aCCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGAATGGCGCTGGca > 2:5304835/1‑93 (MQ=255)
ccGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCATGGCGCTGGcac < 1:5548592/93‑1 (MQ=255)
cggAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCATGGCGCTGGCACaa < 1:4395137/91‑1 (MQ=255)
gCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCATGGCGCTGGCACAACGTg > 2:280124/1‑93 (MQ=255)
gCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCATGGCGCTGGCACAACGTg > 1:6378527/1‑93 (MQ=255)
cATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCATGGCGCTGGCACAACGTgc < 1:4817783/93‑1 (MQ=255)
cATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCATGGCGCTGGCACAACGTgc > 1:2981676/1‑93 (MQ=255)
aTAGGCCCGGACTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCATGGCGCTGGCACAACGTgcg < 2:6219403/93‑1 (MQ=255)
tAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCATGGCGCTGGCACAACGTgcgc > 2:5794217/1‑93 (MQ=255)
tAGGCCCGGACTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCATGGCGCTGGCACAACGTgcgc > 2:1918039/1‑93 (MQ=255)
aGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCATGGCGCTGGCACAACGTGCGCa > 2:3677659/1‑93 (MQ=255)
aGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCATGGCGCTGGCACAACGTGCGCa < 2:3155801/93‑1 (MQ=255)
aGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCATGGCGCTGGCACAACGTGCGCa < 2:1595060/93‑1 (MQ=255)
aGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCATGGCGCTGGCACAACGTGCGCa < 2:1556544/93‑1 (MQ=255)
ggCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCATGGCGCTGGCACAACGTGCGCAc > 2:3262576/1‑93 (MQ=255)
ggCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCATGGCGCTGGCACAACGTGCGCAc > 2:2626594/1‑93 (MQ=255)
gccGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCATGGCGCTGGCACAACGTGCGCACtt < 2:6528690/92‑1 (MQ=255)
cccGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCATGGCGCTGGCACAACGTGCGCACtt > 1:4604853/1‑93 (MQ=255)
cccGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCATGGCGCTGGCACAACGTGCGCACtt > 2:849903/1‑93 (MQ=255)
ccGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCATGGCGCTGGCACAACGTGCGCACttt > 2:4835145/1‑93 (MQ=255)
ccGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCATGGCGCTGGCACAACGTGCGCACttt < 2:380303/93‑1 (MQ=255)
ccGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCATGGCGCTGGCACAACGTGCGCACttt < 2:256837/93‑1 (MQ=255)
ccGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCATGGCGCTGGCACAACGTGCGCACttt < 2:1621871/93‑1 (MQ=255)
gACTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCATGGCGCTGGCACAACGTGCGCACTTTGGc < 1:4175430/93‑1 (MQ=255)
|
CTGATGGCGCTGGTGTTGTCTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGACTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCATGGCGCTGGCACAACGTGCGCACTTTGGCT > NC_000913/3715257‑3715440
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGCTGATGGCGCTGGTGTTGTCTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGACTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCATGGCGCTGGCACAACGTGCGCACTTTGGCTT > NC_000913/3715255‑3715441
|
CGCTGATGGCGCTGGTGTTGTCTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGG < SRR4302547.3262736/94‑1 (MQ=60)
GCTGATGGCGCTGGTGTTGTCTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGAC > SRR4302547.5978379/1‑94 (MQ=60)
CTGATGGCGCTGGTGTTGTCTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCT < SRR4302547.4543822/94‑1 (MQ=60)
CTGATGGCGCTGGTGTTGTCTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCT < SRR4302547.456567/94‑1 (MQ=60)
CTGATGGCGCTGGTGTTGTCTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCT > SRR4302547.4302741/1‑94 (MQ=60)
CTGATGGCGCTGGTGTTGTCTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCT < SRR4302547.2834875/94‑1 (MQ=60)
CTGATGGCGCTGGTGTTGTCTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGACT < SRR4302547.326000/94‑1 (MQ=60)
CTGATGGCGCTGGTGTTGTCTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGACT > SRR4302547.1422773/1‑94 (MQ=60)
TGATGGCGCTGGTGTTGTCTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTG > SRR4302547.5428726/1‑94 (MQ=60)
TGATGGCGCTGGTGTTGTCTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTG > SRR4302547.6775710/1‑94 (MQ=60)
ATGGCGCTGGTGTTGTCTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGACTGGT < SRR4302547.4435067/94‑1 (MQ=60)
TGGCGCTGGTGTTGTCTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTA > SRR4302547.1480658/1‑94 (MQ=60)
TGGCGCTGGTGTTGTCTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGAATAGGCCCGGGCTGGTA < SRR4302547.3862102/94‑1 (MQ=60)
GGCGCTGGTGTTGTCTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTAC > SRR4302547.3133375/1‑94 (MQ=60)
GGCGCTGGTGTTGTCTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGACTGGTAC > SRR4302547.6484700/1‑94 (MQ=60)
GCGCTGGTGTTGTCTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACG < SRR4302547.6083886/94‑1 (MQ=60)
GCGCTGGTGTTGTCTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACG < SRR4302547.5423530/94‑1 (MQ=60)
CGCTGGTGTTGTCTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGG > SRR4302547.6078322/1‑94 (MQ=60)
CGCTGGTGTTGTCTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGACTGGTACGG > SRR4302547.2950476/1‑94 (MQ=60)
CTGGTGTTGTCTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCA > SRR4302547.2665304/1‑94 (MQ=60)
CTGGTGTTGTCTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGACTGGTACGGCA < SRR4302547.2161891/94‑1 (MQ=60)
CTGGTGTTGTCTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGACTGGTACGGCA > SRR4302547.5254442/1‑94 (MQ=60)
TGGTGTTGTCTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCAC > SRR4302547.2288819/1‑94 (MQ=60)
GGTGTTGTCTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACT > SRR4302547.1879236/1‑94 (MQ=60)
GGTGTTGTCTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACT < SRR4302547.2539505/94‑1 (MQ=60)
GGTGTTGTCTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACT < SRR4302547.436946/94‑1 (MQ=60)
GGTGTTGTCTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACA < SRR4302547.2438597/94‑1 (MQ=60)
GGTGTTGTCTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGACTGGTACGGCACT > SRR4302547.4382289/1‑94 (MQ=60)
GTGTTGTCTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTG < SRR4302547.4339982/94‑1 (MQ=60)
GTGTTGTCTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTG < SRR4302547.684359/94‑1 (MQ=60)
GTGTTGTCTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAAGGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTG < SRR4302547.1894924/94‑1 (MQ=60)
TGTTGTCTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGA > SRR4302547.2428927/1‑94 (MQ=60)
GTAGTCTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGAC > SRR4302547.6495467/1‑94 (MQ=60)
TTGTCTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGACTGGTACGGCACTGACG < SRR4302547.5494202/94‑1 (MQ=60)
TTGTCTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGACTGGTACGGCACTGACG < SRR4302547.5537140/94‑1 (MQ=60)
GTCTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGACTGGTACGGCACTGACGTT < SRR4302547.1638600/94‑1 (MQ=60)
CTACCGCTCGTCGGGTTGTGTAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCA > SRR4302547.6551107/1‑94 (MQ=60)
CTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCA > SRR4302547.4637392/1‑94 (MQ=60)
CTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCA > SRR4302547.347882/1‑94 (MQ=60)
CTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCA < SRR4302547.2837590/94‑1 (MQ=60)
TACCGCTCGTCGGGTTGTGGCGGGAGCAGAACGGGTAAAAGCAGGCGAATGGACGGCGAGCATAGGCCCGGACTGGTACagcaatggcgctccc > SRR4302547.2594546/1‑79 (MQ=60)
TACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCAC > SRR4302547.3377567/1‑94 (MQ=60)
ACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACC < SRR4302547.5433722/94‑1 (MQ=60)
CCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCA > SRR4302547.6077688/1‑94 (MQ=60)
CCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGACTGGTACGGCACTGACGTTCACCA > SRR4302547.3294761/1‑94 (MQ=60)
CGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCca > SRR4302547.4830219/1‑92 (MQ=60)
CGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCAT > SRR4302547.4315588/1‑94 (MQ=60)
CGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCAT > SRR4302547.3185922/1‑94 (MQ=60)
CGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCAT < SRR4302547.4052480/94‑1 (MQ=60)
CTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAA < SRR4302547.4740815/94‑1 (MQ=60)
CTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAA < SRR4302547.4863044/94‑1 (MQ=60)
CTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAA > SRR4302547.2148627/1‑94 (MQ=60)
CTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAA > SRR4302547.4577998/1‑94 (MQ=60)
CGCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAA < SRR4302547.1435177/94‑1 (MQ=60)
CGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAA > SRR4302547.138772/1‑94 (MQ=60)
TCGTGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCTCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACA < SRR4302547.4003007/94‑1 (MQ=60)
TCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACA < SRR4302547.4111890/94‑1 (MQ=60)
GGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTG > SRR4302547.2670419/1‑94 (MQ=60)
GGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTG > SRR4302547.924550/1‑94 (MQ=60)
GTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGG < SRR4302547.4467829/94‑1 (MQ=60)
GTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGG < SRR4302547.243746/94‑1 (MQ=60)
GTTGGGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGG < SRR4302547.3875101/94‑1 (MQ=60)
TTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGG < SRR4302547.3461867/94‑1 (MQ=60)
TTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGG > SRR4302547.2215398/1‑94 (MQ=60)
TTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGG < SRR4302547.5610541/94‑1 (MQ=60)
TGAGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGC > SRR4302547.4276890/1‑94 (MQ=60)
GTGGAGGTAGCAGAACGGGCAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCAACATAAAACACTatgca > SRR4302547.2568278/1‑89 (MQ=60)
TGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCAT < SRR4302547.718315/94‑1 (MQ=60)
GAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTG > SRR4302547.5912240/1‑94 (MQ=60)
GAGGGAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTG < SRR4302547.1368279/94‑1 (MQ=60)
AGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTAACCATAAAACACTGGGCATTGT > SRR4302547.4571791/1‑94 (MQ=60)
GGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTC > SRR4302547.217483/1‑94 (MQ=60)
GGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTC > SRR4302547.1295364/1‑94 (MQ=60)
GGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTC < SRR4302547.6095406/94‑1 (MQ=60)
GGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTC > SRR4302547.4445777/1‑94 (MQ=60)
GTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCG < SRR4302547.797592/94‑1 (MQ=60)
GTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCG < SRR4302547.6377338/94‑1 (MQ=60)
TAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGG < SRR4302547.66479/94‑1 (MQ=60)
AGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGG < SRR4302547.4301908/94‑1 (MQ=60)
AGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGG > SRR4302547.3737339/1‑94 (MQ=60)
AGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGG < SRR4302547.2599831/94‑1 (MQ=60)
AGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGG > SRR4302547.2486990/1‑94 (MQ=60)
AGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGG > SRR4302547.2413887/1‑94 (MQ=60)
AGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGG < SRR4302547.2386359/94‑1 (MQ=60)
GCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGACTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGA < SRR4302547.497543/94‑1 (MQ=60)
GCAGAACGGGAGGAAGCAGGCAAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCAATGACGTTCACCATAAAACAATGGGCAATGTCGGGA < SRR4302547.6778988/94‑1 (MQ=60)
CAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTAGGCATTGTCGtgag > SRR4302547.2638593/1‑90 (MQ=60)
CAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGACTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGAT < SRR4302547.4920273/94‑1 (MQ=60)
AGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATG < SRR4302547.5551850/94‑1 (MQ=60)
AGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATG > SRR4302547.3498274/1‑94 (MQ=60)
AGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATG < SRR4302547.1712086/94‑1 (MQ=60)
AGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATG < SRR4302547.3277532/94‑1 (MQ=60)
GAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGG < SRR4302547.2090310/94‑1 (MQ=60)
GAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGG < SRR4302547.3651317/94‑1 (MQ=60)
GAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGG > SRR4302547.3982101/1‑94 (MQ=60)
AACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGG < SRR4302547.1958897/94‑1 (MQ=60)
AACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGG > SRR4302547.4115153/1‑94 (MQ=60)
AACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGG < SRR4302547.725067/94‑1 (MQ=60)
AACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGACTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGG < SRR4302547.1579958/94‑1 (MQ=60)
CGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGAC < SRR4302547.437264/94‑1 (MQ=60)
GGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACG < SRR4302547.5356295/94‑1 (MQ=60)
GGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACG < SRR4302547.1155655/94‑1 (MQ=60)
GGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGG > SRR4302547.369770/1‑94 (MQ=60)
GGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGG > SRR4302547.2567952/1‑94 (MQ=60)
TAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGAT < SRR4302547.2772217/94‑1 (MQ=60)
AAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCTTTGTCGGGATGGGACGGATC < SRR4302547.6633068/94‑1 (MQ=60)
AAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATC < SRR4302547.1813994/94‑1 (MQ=60)
AAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATC < SRR4302547.6474514/94‑1 (MQ=60)
ATAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCG < SRR4302547.6402411/94‑1 (MQ=60)
AAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCG < SRR4302547.3496043/94‑1 (MQ=60)
AGCAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGC < SRR4302547.3165751/94‑1 (MQ=60)
AGCAGGCGAATGGACCGCGAGCATAGGCCCGGACTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGC > SRR4302547.6518160/1‑94 (MQ=60)
CAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCAT > SRR4302547.5019413/1‑94 (MQ=60)
CAGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCAT < SRR4302547.1637930/94‑1 (MQ=60)
AGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCATG < SRR4302547.4626205/94‑1 (MQ=60)
AGGCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCATG < SRR4302547.1786382/94‑1 (MQ=60)
GGCGAATGGACCGCGAGCATAGGCCCGGACTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCATGG < SRR4302547.5904150/94‑1 (MQ=60)
GCGAATGGACCGCGCGCATAGGCGCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCATGGC < SRR4302547.6440733/94‑1 (MQ=60)
GCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCATGGC < SRR4302547.2920393/94‑1 (MQ=60)
GCGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCATGGC < SRR4302547.3432640/94‑1 (MQ=60)
CGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCATGGCG > SRR4302547.380480/1‑94 (MQ=60)
CGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCATGGCG > SRR4302547.6211223/1‑94 (MQ=60)
CGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCATGGCG > SRR4302547.786395/1‑94 (MQ=60)
CGAATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCATGGCG > SRR4302547.4963691/1‑94 (MQ=60)
CGAATGACCCGCGAGCATAGGCCCGGGCTGGTACTGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGTTGGGACGGATCGGCATGGCG < SRR4302547.3239070/94‑1 (MQ=60)
AATGGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCATGGCGCT < SRR4302547.5197487/94‑1 (MQ=60)
ATGGACCGCGGGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGAGGGGACGGATCGGCATGGCTCTG < SRR4302547.1596331/94‑1 (MQ=60)
ATGGACCGCGAGCATAGGCGCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCATGGCGCTG < SRR4302547.6445736/94‑1 (MQ=60)
GGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCGTGGCGCTGGC > SRR4302547.3358151/1‑94 (MQ=60)
GGACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCATGGCGCTGGC > SRR4302547.3548371/1‑94 (MQ=60)
GGACCGCGAGCATAGGCCCGGACTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCATGGCGCTGGC > SRR4302547.5610140/1‑94 (MQ=60)
GACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCATGGCGCTGGCA < SRR4302547.717138/94‑1 (MQ=60)
GACCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCATGGCGCTGGCA > SRR4302547.2988475/1‑94 (MQ=60)
GACCGCGAGCATAGGCCCGGACTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCATGGCGCTGGCA < SRR4302547.1869826/94‑1 (MQ=60)
CGGCGAGCATAGGCCCGGTCTGGTACGGCACTGACGTTCACCATAAATCACTGGGTATTGTCGGGATGGGACGGATCGGCATGGCGCTGGCACA < SRR4302547.3350864/94‑1 (MQ=60)
CCGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCATGGCGCTGGCACA < SRR4302547.5663082/94‑1 (MQ=60)
CCGCGAGCATAGGCCCGGACTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCATGGCGCTGGCACA > SRR4302547.5636813/1‑94 (MQ=60)
CGCGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCATGGCGCTGGCACAA > SRR4302547.205690/1‑94 (MQ=60)
CGCGAGCATAGGCCCGGACTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCATGGCGCTGGCACAA > SRR4302547.6092785/1‑94 (MQ=60)
cgGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCATGGCGCTGGCACAAC < SRR4302547.4485605/92‑1 (MQ=60)
GCGAGCATAGCCCCGGGCTGGTACGGCACTGACGTTCAGCATAAAACACGGGGCATTGTCGGGATGGGACGGATCGGCATGGCGCTGGCACAAC < SRR4302547.4540489/94‑1 (MQ=60)
CGAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCATGGCGCTGGCACAACG < SRR4302547.1278274/94‑1 (MQ=60)
GAGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCATGGCGCTGGCACAACGT < SRR4302547.628841/94‑1 (MQ=60)
AGCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCATGGCGCTGGCACAACGTG > SRR4302547.6511650/1‑94 (MQ=60)
GCATAGGCCCGGGCTGGTACGGCAGTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGTACGGATCGGCATGGCGCTGGCACAACGTGC < SRR4302547.4210372/94‑1 (MQ=60)
GCATAGGCCCGGGCTGGTACGGCACTGACGTTCTCCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCATGGCGCTGGCACAACGTGC < SRR4302547.674422/94‑1 (MQ=60)
GCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCATGGCGCTGGCACAACGTGC > SRR4302547.3041014/1‑94 (MQ=60)
GCATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCATGGCGCTGGCACAACGTGC > SRR4302547.3041015/1‑94 (MQ=60)
CATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCATGGCGCTGGCACAACGTGCG > SRR4302547.163067/1‑94 (MQ=60)
CATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCATGGCGCTGGCACAACGTGCG < SRR4302547.4917625/94‑1 (MQ=60)
CATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGAACGGCATGGCGCTGGCACAACGTCCG > SRR4302547.455916/1‑94 (MQ=60)
ATAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCATGGCGCTGGCACAACGTGCGC > SRR4302547.835882/1‑94 (MQ=60)
TAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCATGGCGCTGGCACAACGTGCGCA < SRR4302547.3625811/94‑1 (MQ=60)
TAGGCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCATGGCGCTGGCACAACGTGCGCA > SRR4302547.3412167/1‑94 (MQ=60)
GCCCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCATGGCGCTGGCACAACGTGCGCACTT > SRR4302547.4700145/1‑94 (MQ=60)
CCCGGACTGGTACGGCACTGACGTTCACCATAAAACACT‑GGCATTGTCGGGATGGGACGGATCGGCATTGGCCTGGCACAACGGGCGCCCTTTG > SRR4302547.4919380/1‑94 (MQ=60)
CCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCATGGCGCTGGCACAACGTGCGCACTTTG < SRR4302547.4115738/94‑1 (MQ=60)
CCGGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCATGGCGCTGGCACAACGTGCGCACTTTG < SRR4302547.5679648/94‑1 (MQ=60)
GGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCATGGCGCTGGCACAACGTGCGCACTTTGGC > SRR4302547.4760592/1‑94 (MQ=60)
GGGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCATGGCGCTGGCACAACGTGCGCACTTTGGC > SRR4302547.6196503/1‑94 (MQ=60)
GGACTGGTACGTCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCATGGCGCTGGCACAACGTGCGGACTTTGGC < SRR4302547.4845323/94‑1 (MQ=60)
GGCTGGTACGGCACTGACGTTCACCATAAAATACTGGGCATTGTCGGGATGGGACGGATCGGCATGGCGCTGGCACAACGTGCGCACTTTGGCT > SRR4302547.6412515/1‑94 (MQ=60)
GGCTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCATGGCGCTGGCACAACGTGCGCACTTTGGCT > SRR4302547.3024127/1‑94 (MQ=60)
GACTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCATGGCGCTGGCACAACGTGCGCACTTTGGCT < SRR4302547.4260496/94‑1 (MQ=60)
ACTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCATGGCGCTGGCACAACGTGCGCACTTTGGCTT < SRR4302547.4747799/94‑1 (MQ=60)
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CGCTGATGGCGCTGGTGTTGTCTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGACTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCATGGCGCTGGCACAACGTGCGCACTTTGGCTT > NC_000913/3715255‑3715441
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
