Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
593 |
264.2 |
13311096 |
97.8% |
13018251 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| JC |
NC_000913 |
3,938,587 |
+TGC |
coding (220/546 nt) |
yiePs ← |
hypothetical protein |
|
| |
seq id |
position |
reads (cov) |
reads (cov) |
score |
skew |
freq |
annotation |
gene |
product |
| * |
? |
NC_000913 |
= 3938584 | 0 (0.000) | 300 (1.200)
+TGC |
137/172 |
0.0 |
100% |
coding (223/546 nt) |
yiePs |
hypothetical protein |
| ? | NC_000913 |
3938585 = |
0 (0.000) | coding (222/546 nt) |
yiePs |
hypothetical protein |
Only 100 of 323 total aligned reads displayed.
ATCCAGCGTTCACGGCGAAAGTTCTCTTTTAATGCCGCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3938493‑3938584
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGG > NC_000913/3938585‑3938676
|||
CCAGCGTTCACGGCGAAAGTTCTCTTTTAATGCCGCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACCGTTGC < 2:3792448/93‑1
CAGCGTTCACGGCGAAAGTTCTCTTTTAATGCCGCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACCGTTGCT > 1:4331751/1‑93
CAGCGTTCACGGCGAAAGTTCTCTTTTAATGCCGCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACCGTTGCT > 2:5778217/1‑93
GCGTTCACGGCGAAAGTTCTCTTTTAATGCCGCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACCGTTGCTGC < 1:5086650/93‑1
TTCACGGCGAAAGTTCTCTTTTAATGCCGCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACCGTTGCTGCCAG > 1:3521144/1‑93
TTCACGGCGAAAGTTCTCTTTTAATGCCGCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACCGTTGCTGCCAG > 1:1511235/1‑93
TCACGGCGAAAGTTCTCTTTTAATGCCGCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACCGTTGCTGCCAGT < 2:4940514/93‑1
CACGGCGAAAGTTCTCTTTTAATGCCGCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACCGTTGCTGCCAGTA < 1:6567691/93‑1
ACGGCGAAAGTTCTCTTTTAATGCCGCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACCGTTGCTGCCAGTAG > 2:3627399/1‑93
GGCGAAAGTTCTCTTTTAATGCCGCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACCGTTGCTGCCAGTAGGC < 1:725611/93‑1
GGCGAAAGTTCTCTTTTAATGCCGCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACCGTTGCTGCCAGTAGGC > 1:4827051/1‑93
GCGAAAGTTCTCTTTTAATGCCGCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACCGTTGCTGCCAGTAGGCA > 2:1565636/1‑93
GCGAAAGTTCTCTTTTAATGCCGCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACCGTTGCTGCCAGTAGGCA < 2:6224753/93‑1
GAAAGTTCTCTTTTAATGCCGCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACCGTTGCTGCCAGTAGGCAGG > 1:1935409/1‑93
AAAGTTCTCTTTTAATGCCGCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACCGTTGCTGCCAGTAGGCAGGC < 2:1844412/93‑1
AAGTTCTCTTTTAATGCCGCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACCGTTGCTGCCAGTAGGCAGGCT < 1:1396896/93‑1
AGTTCTCTTTTAATGCCGCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACCGTTGCTGCCAGTAGGCAGGCTT < 2:2116191/93‑1
AGTTCTCTTTTAATGCCGCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACCGTTGCTGCCAGTAGGCAGGCTT > 2:3999300/1‑93
TTCTCTTTTAATGCCGCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACCGTTGCTGCCAGTAGGCAGGCTTGC > 1:3586221/1‑93
TCTTTTAATTCCGCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACCGTTGCTGCCAGTAGGCAGGCTTGCGGC < 1:4656488/93‑1
TCTTTTAATGCCGCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACCGTTGCTGCCAGTAGGCAGGCTTGCGGC > 2:3322244/1‑93
TTTAATGCCGCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACCGTTGCTGCCAGTAGGCAGGCTTGCGGCTCC < 2:3227569/93‑1
TAATGCCGCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCGAACCGTTGCTGCCAGTAGGCAGGCTTGCGGCTGCAG > 1:2445556/1‑93
ATGCCGCCCTTTCGGCCATTAGCGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACCGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGAC < 1:1858697/93‑1
ATGCCGCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACCGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGAC > 2:4462282/1‑93
ATGCCGCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACCGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGAC > 2:5694786/1‑93
GCCGCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACCGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAG > 1:3005841/1‑93
GCCGCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACCGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAG > 1:5358672/1‑93
CGCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACCGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGAT > 2:6498107/1‑93
GCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACCGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATA < 2:6542227/93‑1
GCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACCGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATA < 1:1097959/93‑1
CCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACCGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATAC > 2:415545/1‑93
CATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACCGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACG > 2:906434/1‑93
CATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACCGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACG < 1:6192506/93‑1
ATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACCGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGC > 2:4985776/1‑93
TTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACCGTTGCTGCCCGTAGGCAGGCTTGCGGGTCCCGACCGATAAGCA > 2:572610/1‑93
TTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACCGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCA > 1:1659038/1‑93
TTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACCGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCAT < 1:2096387/93‑1
TTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACCGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCAT > 1:1684206/1‑93
TTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACCGTTGCTGCCAGTAGGCAGGCTTGCGGCCCCAGACAGATACGCAT > 2:4540520/1‑93
CGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACCGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAA > 2:820836/1‑93
GGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACCGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAAC > 2:5571081/1‑93
CCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACCGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCA < 1:3735515/93‑1
CCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACCGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCA > 1:3374940/1‑93
CATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACCGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAG < 1:828073/93‑1
TTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACCGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAA > 1:5954347/1‑93
CGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACCGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTG < 2:3890394/93‑1
GTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACCGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGA > 2:4751116/1‑93
GTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACCGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGA < 1:2860797/93‑1
GTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACCGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGA > 2:5162160/1‑93
GTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACCGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGA < 2:6596623/93‑1
GTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACCGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGGGA > 1:6134582/1‑93
ATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACCGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATC < 2:3435300/93‑1
ATTGAGATGCGCTTTCTGTTCAGCGGTGCCAACCGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATC > 1:4227992/1‑93
TTGAGATGCGCTTTCTGTTCCGCGGTGCCAACCGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCG < 2:4332106/93‑1
GAGATGCTCTTTCTGTTCCGCGGTGCCAACCGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGAT < 2:3726888/93‑1
GAGATGCGCTTTCTGTTCCGCGGTGCCAACCGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGAT > 2:5501522/1‑93
GCTTTCTGTTCCGCGGTGCCAACCGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGA < 2:1982968/93‑1
TTTCTGTTCCGCGGTGCCAACCGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAATCAGAAAGTGATCGATGACCTGATG > 2:6652114/1‑93
TTTCTGTTCCGCGGTGCCAACCGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATG < 2:2614752/93‑1
TTCTGTTCCGCGGTGCCAACCGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGA < 1:2625305/93‑1
CTGTTCCGCGGTGCCAACCGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAA < 2:248701/93‑1
CTGTTCCGCGGTGCCAACCGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAA < 1:6480819/93‑1
CTGTTCCGCGGTGCCAACCGTTGCTGCCAGTAGGCAGACTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAA < 2:2242731/93‑1
TGTTCCGCGGTGCCAACCGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAG < 1:197958/93‑1
TGTCCCGCGGTGCCACCCGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAG < 1:2380549/93‑1
TTCCGCGGTGCCAACCGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTT > 2:1696783/1‑93
TCCGCGGTGCCAACCGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTC > 2:1764657/1‑93
TCCGCGGTGCCAACCGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTC < 1:1237978/93‑1
GTGCCAACCGTTGCTGCCAGTAGGCAGGCTTGCGGGTCCAGACAGATACGCATAAACAAAAAATGATCGATGACCTGATGAAAAATCTCTTtt > 1:4472706/1‑91
GTGCCAACCGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACCGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCT > 1:396710/1‑93
GTGCCAACCGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCT < 1:2741061/93‑1
GTGCCAACCGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCT > 1:6517761/1‑93
GTGCCAACCGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCT < 1:3861586/93‑1
TGCCAACCGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTG < 2:138381/93‑1
TGCCAACCGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTG < 2:1128795/93‑1
TGCCAACCGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTG < 1:868557/93‑1
TGCCAACCGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGAACTGATGAAAGTTCTCTTCTG > 1:6241746/1‑93
GCCACCCGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGT < 2:5842978/93‑1
GCCAACCGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGT < 2:4697331/93‑1
CAACCGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCA < 1:5544298/93‑1
AACCGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCAT > 1:11566/1‑93
AACCGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCAT > 2:3079853/1‑93
AACCGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCAT < 2:1276527/93‑1
AACCGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGGTCTCTTCTGTCAT > 2:422228/1‑93
ACCGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATC > 1:1751168/1‑93
ACCGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATC > 2:1722624/1‑93
CCGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCC < 1:6030507/93‑1
CCGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCC > 2:6090672/1‑93
CGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCA > 2:1918880/1‑93
CGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCA < 2:638526/93‑1
GTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCAC < 1:5201620/93‑1
TTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGATAGTGATCGATGACCTGATGAAAGTTTTCTTCTGTCATTCACC > 2:2707298/1‑93
TTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACC < 2:2399734/93‑1
TTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACC < 1:3935291/93‑1
TTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACC < 2:2763780/93‑1
TTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACC < 2:5252782/93‑1
GCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAG < 2:2986313/93‑1
GCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAG > 1:3677056/1‑93
CTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGG > 1:323824/1‑93
|||
ATCCAGCGTTCACGGCGAAAGTTCTCTTTTAATGCCGCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3938493‑3938584
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGG > NC_000913/3938585‑3938676
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
|---|
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TCCAGCGTTCACGGCGAAAGTTCTCTTTTAATGCCGCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GT‑‑‑T‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAG > NC_000913/3938494‑3938680
|
TCCAGCGTTCACGGCGAAAGTTCTCTTTTAATGCCGCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GT‑‑‑T‑‑‑GC > SRR4302547.1634484/1‑94 (MQ=60)
CCAGCGTTCACGGCGAAAGTTCTCTTTTAATGCCGCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GT‑‑‑T‑‑‑GCT < SRR4302547.2494616/94‑1 (MQ=60)
CCAGCGTTCACGGCGAAAGTTCTCTTTTAATGCCGCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GT‑‑‑T‑‑‑GCT > SRR4302547.4420873/1‑94 (MQ=60)
GCGTTCACGGCGAAAGTTCTCTTTTAATGCCGCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GT‑‑‑T‑‑‑GCtgcc < SRR4302547.5191570/94‑5 (MQ=60)
GTTCACGGCGAAAGTTCTCTTTTAATGCCGCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GT‑‑‑T‑‑‑GCtgccag > SRR4302547.3593020/1‑88 (MQ=60)
GTTCACGGCGAAAGTTCTCTTTTAATGCCGCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GT‑‑‑T‑‑‑GCtgccag < SRR4302547.4377819/94‑7 (MQ=60)
GTTCACGGCGAAAGTTCTCTTTTAATGCCGCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GT‑‑‑T‑‑‑GCtgccag > SRR4302547.4014655/1‑88 (MQ=60)
GTTCACGGCGAAAGTTCTCTTTTAATGCCGCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GT‑‑‑T‑‑‑GCtgccag > SRR4302547.1541352/1‑88 (MQ=60)
TTCACGGCGAAAGTTCTCTTTTAATGCCGCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GT‑‑‑T‑‑‑GCtgccagt > SRR4302547.4382566/1‑87 (MQ=60)
CACGGCGAAAGTTCTCTTTTAATGCCGCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAG < SRR4302547.1430097/94‑1 (MQ=60)
CACGGCGAAAGTTCTCTTTTAATGCCGCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAG > SRR4302547.2784003/1‑94 (MQ=60)
CACGGCGAAAGTTCTCTTTTAATGCCGCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAG < SRR4302547.6704436/94‑1 (MQ=60)
CACGGCGAAAGTTCTCTTTTAATGCCGCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAG > SRR4302547.4659104/1‑94 (MQ=60)
ACGGCGAAAGTTCTCTTTTAATGCCGCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGG < SRR4302547.704293/94‑1 (MQ=60)
CGGCGAAAGTTCTCTTTTAATGCCGCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGC < SRR4302547.2802808/94‑1 (MQ=60)
CGGCGAAAGTTCTCTTTTAATGCCGCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGC > SRR4302547.5282507/1‑94 (MQ=60)
CGGCGAAAGTTCTCTTTTAATGCCGCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGC > SRR4302547.4927132/1‑94 (MQ=60)
GGCGAAAGTTCTCTTTTAATGCCGCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCA < SRR4302547.739130/94‑1 (MQ=60)
GCGAAAGTTCTCTTTTAATGCCGCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAG < SRR4302547.6143075/94‑1 (MQ=60)
TGAAAGTTCTCTTTTAATGCCGCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGG > SRR4302547.1342451/1‑94 (MQ=60)
CGAAAGTTCTCTTTTAATGCCGCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGT < SRR4302547.3506036/94‑1 (MQ=60)
CGAAAGTTCTCTTTTAATGCCGCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGG > SRR4302547.1973796/1‑94 (MQ=60)
GAAAGTTCTCTTTTAATGCCGCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGC > SRR4302547.6111885/1‑94 (MQ=60)
AAAGTTCTCTTTTAATGCCGCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCT < SRR4302547.4825270/94‑1 (MQ=60)
AAGTTCTCTTTTAATGCCGCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTT < SRR4302547.1424843/94‑1 (MQ=60)
AGTTCTCTTTTAATGCCGCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTG > SRR4302547.4852363/1‑94 (MQ=60)
GTTCTCTTTTAATGCCGCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGC > SRR4302547.3659390/1‑94 (MQ=60)
GTTCTCTTTTAATGCCGCCATTTCCGCCATTAACGTATTGAGATGCGTTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTtg > SRR4302547.5446548/1‑92 (MQ=60)
TTCTCTTTTAATGCCGCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCG < SRR4302547.5457057/94‑1 (MQ=60)
TTCTCTTTTAATGCCGCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCG < SRR4302547.1121562/94‑1 (MQ=60)
TCTCTTTTAATGCCGCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGCTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGG < SRR4302547.959260/94‑1 (MQ=60)
CTCTTTTAATGCCGCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGC > SRR4302547.1801080/1‑94 (MQ=60)
CTCTTTTAATGCCGCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGC > SRR4302547.2513704/1‑94 (MQ=60)
TCTTTTAATTCCGCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCT < SRR4302547.4752927/94‑1 (MQ=60)
CTTTTAATGCCGCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTC < SRR4302547.2934993/94‑1 (MQ=60)
CTTTTAATGCCGCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTC < SRR4302547.17146/94‑1 (MQ=60)
TTTTAATGCCGCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCC < SRR4302547.369197/94‑1 (MQ=60)
TTAATGCCGCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCGAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTGCAG > SRR4302547.2494997/1‑94 (MQ=60)
AATGCCGCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGAC > SRR4302547.3105002/1‑94 (MQ=60)
ATGCCGCCCTTTCGGCCATTAGCGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACA < SRR4302547.1895407/94‑1 (MQ=60)
ATGCCGCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACA < SRR4302547.1902083/94‑1 (MQ=60)
TGCCGCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCTGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTACAGAGAG > SRR4302547.600316/1‑94 (MQ=60)
TGCCGCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAG > SRR4302547.3065619/1‑94 (MQ=60)
TGCCGCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAG > SRR4302547.5469205/1‑94 (MQ=60)
GCCGCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGA < SRR4302547.3814115/94‑1 (MQ=60)
CCGCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGAT < SRR4302547.4193132/94‑1 (MQ=60)
CGCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACCGGTGC‑‑‑T‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATA > SRR4302547.5591345/1‑94 (MQ=60)
CGCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATA > SRR4302547.2462541/1‑94 (MQ=60)
CGCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATA > SRR4302547.5544437/1‑94 (MQ=60)
CGCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATA > SRR4302547.6182307/1‑94 (MQ=60)
GCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATAC < SRR4302547.409797/94‑1 (MQ=60)
GCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATAC < SRR4302547.1120001/94‑1 (MQ=60)
CCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACG < SRR4302547.2707933/94‑1 (MQ=60)
CCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACG < SRR4302547.1727804/94‑1 (MQ=60)
CATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGGCAGATACGC > SRR4302547.187035/1‑94 (MQ=60)
CATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGC < SRR4302547.6321059/94‑1 (MQ=60)
CATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACCC > SRR4302547.1706774/1‑94 (MQ=60)
ATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCA > SRR4302547.1691760/1‑94 (MQ=60)
ATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCA > SRR4302547.3622649/1‑94 (MQ=60)
TTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCAT > SRR4302547.4425592/1‑94 (MQ=60)
TTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCAT > SRR4302547.1717357/1‑94 (MQ=60)
TTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCAT < SRR4302547.2863805/94‑1 (MQ=60)
TTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATA < SRR4302547.2138183/94‑1 (MQ=60)
CGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAAC > SRR4302547.1899755/1‑94 (MQ=60)
CGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAAC < SRR4302547.1218338/94‑1 (MQ=60)
CGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAAC > SRR4302547.1740181/1‑94 (MQ=60)
GGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACC > SRR4302547.5629256/1‑94 (MQ=60)
GGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACC > SRR4302547.6428861/1‑94 (MQ=60)
GGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACC > SRR4302547.6649954/1‑94 (MQ=60)
GCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCA > SRR4302547.3443497/1‑94 (MQ=60)
GCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCA < SRR4302547.1215891/94‑1 (MQ=60)
CCATTAACGTATTTAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAG < SRR4302547.6367583/94‑1 (MQ=60)
CCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAG > SRR4302547.948288/1‑94 (MQ=60)
CCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAG < SRR4302547.3811784/94‑1 (MQ=60)
CCATTAACGTATGGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAG < SRR4302547.337683/94‑1 (MQ=60)
CATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGA < SRR4302547.3730235/94‑1 (MQ=60)
CATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGA < SRR4302547.406800/94‑1 (MQ=60)
CATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGA < SRR4302547.843881/94‑1 (MQ=60)
ATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAA > SRR4302547.6077829/1‑94 (MQ=60)
ATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAA < SRR4302547.802256/94‑1 (MQ=60)
TTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAA > SRR4302547.1485222/1‑94 (MQ=60)
TTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAA < SRR4302547.335262/94‑1 (MQ=60)
ACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCCGAAAGTG > SRR4302547.1391083/1‑94 (MQ=60)
ACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTG < SRR4302547.681940/94‑1 (MQ=60)
CGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGA > SRR4302547.3777301/1‑94 (MQ=60)
CGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGGGA > SRR4302547.6261842/1‑94 (MQ=60)
GTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGTCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGAT < SRR4302547.3948400/94‑1 (MQ=60)
GTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGAT > SRR4302547.1655544/1‑94 (MQ=60)
GTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGAT > SRR4302547.2061034/1‑94 (MQ=60)
GTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGAT < SRR4302547.4965526/94‑1 (MQ=60)
GTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGAT < SRR4302547.2917946/94‑1 (MQ=60)
TATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATC > SRR4302547.2549802/1‑94 (MQ=60)
TATTGAGATGCGCTTTCTGTTCAGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATC > SRR4302547.4314405/1‑94 (MQ=60)
TTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGA < SRR4302547.1926245/94‑1 (MQ=60)
TTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGA < SRR4302547.2519530/94‑1 (MQ=60)
TGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGAT < SRR4302547.401021/94‑1 (MQ=60)
GAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATG > SRR4302547.199261/1‑94 (MQ=60)
GAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATG > SRR4302547.855247/1‑94 (MQ=60)
GAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATG > SRR4302547.3882844/1‑94 (MQ=60)
AGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGA > SRR4302547.3474996/1‑94 (MQ=60)
AGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGA > SRR4302547.872056/1‑94 (MQ=60)
ATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACC < SRR4302547.5240035/94‑1 (MQ=60)
ATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACC < SRR4302547.3027962/94‑1 (MQ=60)
GCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTG < SRR4302547.6190726/94‑1 (MQ=60)
GCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTG < SRR4302547.576006/94‑1 (MQ=60)
CGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGA > SRR4302547.6447054/1‑94 (MQ=60)
GCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGAT < SRR4302547.3605483/94‑1 (MQ=60)
GCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGAT > SRR4302547.2077535/1‑94 (MQ=60)
GCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGAT < SRR4302547.4499352/94‑1 (MQ=60)
GCTTTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGAT < SRR4302547.4016174/94‑1 (MQ=60)
TTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAA < SRR4302547.2678189/94‑1 (MQ=60)
TTCTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAA < SRR4302547.6333634/94‑1 (MQ=60)
CTGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAG < SRR4302547.6615747/94‑1 (MQ=60)
TGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGT < SRR4302547.6300302/94‑1 (MQ=60)
TGTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGT < SRR4302547.201657/94‑1 (MQ=60)
TGTCCCGCGGTGCCACCC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGT < SRR4302547.2428780/94‑1 (MQ=60)
GTTCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTT < SRR4302547.4773030/94‑1 (MQ=60)
TCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCT > SRR4302547.4616071/1‑94 (MQ=60)
TCCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCT < SRR4302547.1262971/94‑1 (MQ=60)
CCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTC < SRR4302547.1586336/94‑1 (MQ=60)
CCGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTC < SRR4302547.6675577/94‑1 (MQ=60)
CGCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCT < SRR4302547.3773655/94‑1 (MQ=60)
GCGGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTT < SRR4302547.2320087/94‑1 (MQ=60)
GGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGGTCCAGACAGATACGCATAAACAAAAAATGATCGATGACCTGATGAAAaatctctttt > SRR4302547.4565121/1‑84 (MQ=60)
GGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACCGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCT > SRR4302547.404088/1‑94 (MQ=60)
GGTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCT > SRR4302547.6653459/1‑94 (MQ=60)
GTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTG < SRR4302547.2796050/94‑1 (MQ=60)
GTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTG < SRR4302547.3940169/94‑1 (MQ=60)
GTGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGAACTGATGAAAGTTCTCTTCTG > SRR4302547.6371414/1‑94 (MQ=60)
TGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGT < SRR4302547.885186/94‑1 (MQ=60)
TGCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGT > SRR4302547.3731312/1‑94 (MQ=60)
GCCAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTC < SRR4302547.1134546/94‑1 (MQ=60)
CAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCAT > SRR4302547.6330845/1‑94 (MQ=60)
CAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCAT < SRR4302547.5658704/94‑1 (MQ=60)
CAACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCAT > SRR4302547.11778/1‑94 (MQ=60)
AACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGGCCTGATGAAAGTTCTCTTCTGGCATC > SRR4302547.3085029/1‑94 (MQ=60)
AACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATC > SRR4302547.1785759/1‑94 (MQ=60)
AACC‑‑‑GT‑‑‑TGCGGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATC > SRR4302547.6618666/1‑94 (MQ=60)
ACC‑‑‑GTTGCT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCC < SRR4302547.3210501/94‑1 (MQ=60)
ccgttgcT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCA < SRR4302547.6155655/87‑1 (MQ=60)
gttgcT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACC < SRR4302547.5308653/89‑1 (MQ=60)
GC‑‑‑T‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGG > SRR4302547.329849/1‑94 (MQ=60)
GC‑‑‑T‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGG < SRR4302547.1982070/94‑1 (MQ=60)
ttgcT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCA < SRR4302547.4015321/90‑1 (MQ=60)
tgcT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAG > SRR4302547.3752076/4‑94 (MQ=60)
tgcT‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAG < SRR4302547.5052238/91‑1 (MQ=60)
CCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAG < SRR4302547.62383/94‑1 (MQ=60)
CCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAG > SRR4302547.156785/1‑94 (MQ=60)
CCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAG < SRR4302547.1569308/94‑1 (MQ=60)
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TCCAGCGTTCACGGCGAAAGTTCTCTTTTAATGCCGCCATTTCGGCCATTAACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACC‑‑‑GT‑‑‑T‑‑‑GCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAG > NC_000913/3938494‑3938680
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 6 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
