Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
593 |
264.2 |
13311096 |
97.8% |
13018251 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,004,979 |
+G |
coding (1511/1833 nt) |
recQ → |
ATP‑dependent DNA helicase |
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,004,979 | 1 | . | G | 100.0%
| 948.8
/ NA
| 255 | L504R (CTC→CGC) | recQ | ATP‑dependent DNA helicase |
| Reads supporting (aligned to +/- strand): ref base . (0/0); new base G (134/121); total (134/121) |
Only 100 of 273 total aligned reads displayed.
CGTGATCCGCCAGCTGATTCACCTCGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCT‑CGCG‑‑GAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCAGAAATCGTTCGGCGGCAA > NC_000913/4004887‑4005060
|
cGTGATCCGCCAGCTGATTCACCTCGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCt < 1:5144650/93‑1 (MQ=255)
tGATCCGCCAGCTGATTCACCTCGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCtgc > 2:2866758/1‑91 (MQ=255)
gATCCGCCAGCTGATTCACCTCGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCtgcg < 2:1126584/93‑4 (MQ=255)
aTCCGCCAGCTGATTCACCTCGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGACCGGTGCtgcgc > 2:404837/1‑89 (MQ=255)
cGCCAGCTGATTCACCTCGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCg‑‑gc < 1:3868945/93‑2 (MQ=255)
cGCCAGCTGATTCACCTCGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGCGCTGCGCg‑‑gc > 1:6637189/1‑92 (MQ=255)
gCCAGCTGATTCACCTCGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCg‑‑gcg > 2:4204738/1‑91 (MQ=255)
ccAGCTGATTCACCTCGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCg‑‑gcga > 1:1061408/1‑90 (MQ=255)
ccAGCTGATTCACCTCGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCg‑‑gcga > 1:1547140/1‑90 (MQ=255)
aTTCACCTCGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCGAATCctct > 1:425766/1‑93 (MQ=255)
aTTCACCTCGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCGAATCctct > 1:4409878/1‑93 (MQ=255)
aTTCACCTCGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCGAATCctct > 1:5035237/1‑93 (MQ=255)
aTTCACCTCGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCGAATCctct > 1:881846/1‑93 (MQ=255)
ttCACCTCGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCGAATCCTCtt < 2:5462687/93‑1 (MQ=255)
tCACCTCGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCGAATCCTCttt < 2:6285110/93‑1 (MQ=255)
tCACCTCGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCGAATCCTCttt < 2:3949102/93‑1 (MQ=255)
cACCTCGGCCTCGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCGAATCCTCTTTg < 2:1434071/93‑1 (MQ=255)
aCCTCGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCGAATCCTCTTTGc > 2:2351807/1‑93 (MQ=255)
cTCGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCGAATCCTCTTTGCaa > 2:5528345/1‑93 (MQ=255)
tCGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCGAATCCTCTTTGCAAc < 2:3678340/93‑1 (MQ=255)
cGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCGAATCCTCTTTGCAACt > 2:3450051/1‑93 (MQ=255)
ggCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCGAATCCTCTTTGCAACtt > 1:3440197/1‑93 (MQ=255)
ggCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCGAATCCTCTTTGCAACtt < 2:2248876/93‑1 (MQ=255)
ggCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCGAATCCTCTTTGCAACtt > 2:3827808/1‑93 (MQ=255)
gCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCGAATCCTCTTTGCAACTtg > 2:89049/1‑93 (MQ=255)
gCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCGAATCCTACTTGCAACttc > 2:5797874/1‑92 (MQ=255)
cTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCGAATCCTCTTTGCAACTtgcc > 2:2445936/1‑93 (MQ=255)
cTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCGAATCCTCTTTGCAACTtgcc > 1:3532876/1‑93 (MQ=255)
ggTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCGAATCCTCTTTGCAACTtgccgt > 1:1970437/1‑93 (MQ=255)
ggTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCGAATCCTCTTTGCAACTtgccgt < 1:942699/93‑1 (MQ=255)
gTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCGAATCCTCTTTGCAACTtgccgtg < 1:1137982/93‑1 (MQ=255)
ttaCGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCGAATCCTCTTTGCAACTtgccgtgc > 1:4206525/3‑93 (MQ=255)
tGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCGAATCCTCTTTGCAACTtgccgtgc > 1:2798286/1‑93 (MQ=255)
tGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCGAATCCTCTTTGCAACTtgccgtgc > 2:5533596/1‑93 (MQ=255)
gACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCGAATCCTCTTTGCAACTtgccgtgcc < 1:4692807/93‑1 (MQ=255)
gACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCGAATCCTCTTTGCAACTtgccgtgcc > 2:4860133/1‑93 (MQ=255)
gACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCGAATCCTCTTTGCAACTtgccgtgcc < 1:6175279/93‑1 (MQ=255)
aCGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCGAATCCTCTTTGCAACTtgccgtgccg < 1:4996926/93‑1 (MQ=255)
aCGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCGAATCCTCTTTGCAACTtgccgtgccg > 1:4476028/1‑93 (MQ=255)
aCGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCGAATCCTCTTTGCAACTtgccgtgccg > 2:6409229/1‑93 (MQ=255)
cGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCGAATCCTCTTTGCAACTTGCCGTGCcgc > 1:3569266/1‑93 (MQ=255)
cGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCGAATCCTCTTTGCAACTTGCCGTGCcgc > 2:4986383/1‑93 (MQ=255)
gCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCGAATCCTCTTTGCAACTTGCCGTGCcgcg > 2:5408098/1‑93 (MQ=255)
gCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCGAATCCTCTTTGCAACTTGCCGTGCcgcg > 2:3084029/1‑93 (MQ=255)
gCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCGAATCCTCTTTGCAACTTGCCGTGCcgcg < 1:1663870/93‑1 (MQ=255)
cAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGt > 2:4553041/1‑93 (MQ=255)
cAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGt > 1:5321941/1‑93 (MQ=255)
aaaaTATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTa > 1:3796306/1‑93 (MQ=255)
aaaaTATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTa < 2:2737790/93‑1 (MQ=255)
aaaaTATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTa < 1:3035372/93‑1 (MQ=255)
aaaTATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTAt < 1:1182913/93‑1 (MQ=255)
aaTATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATc < 2:6091057/93‑1 (MQ=255)
atatTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCg > 2:4739655/1‑93 (MQ=255)
tatTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGt < 1:3732760/93‑1 (MQ=255)
tatTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGt > 1:5074929/1‑93 (MQ=255)
ttGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTgg < 1:2013969/93‑1 (MQ=255)
tGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGgc < 2:4398854/93‑1 (MQ=255)
tGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGgc < 1:2285299/93‑1 (MQ=255)
cccAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGgcgc > 1:4065274/1‑93 (MQ=255)
ccAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCt > 2:2109755/1‑93 (MQ=255)
cATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCaaa < 1:2202581/93‑1 (MQ=255)
aTTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAAc < 2:1673591/93‑1 (MQ=255)
aTTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAAc > 1:5803758/1‑93 (MQ=255)
ttCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAAcc < 2:603041/93‑1 (MQ=255)
ttCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAAcc > 1:6239538/1‑93 (MQ=255)
ttCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAAcc < 2:1225383/93‑1 (MQ=255)
cTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGa < 1:542731/93‑1 (MQ=255)
cTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGa < 2:5313187/93‑1 (MQ=255)
tGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGaa < 1:5566516/93‑1 (MQ=255)
gCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGaaa > 1:5236077/1‑93 (MQ=255)
gCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGaaa < 2:669212/93‑1 (MQ=255)
cccTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAg < 1:2855157/93‑1 (MQ=255)
cTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCg > 2:834880/1‑93 (MQ=255)
tACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGa < 2:5393313/93‑1 (MQ=255)
tACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGa < 1:700555/93‑1 (MQ=255)
tACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGa < 2:1501340/93‑1 (MQ=255)
cAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCGAATCCTCTTTGTAACTTGTCGTGCCGCGTATCGTGTTGCTCAAACCGAAAGCGATg > 2:6648105/1‑93 (MQ=255)
cAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATg < 1:2913218/93‑1 (MQ=255)
cAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATg > 1:6453401/1‑93 (MQ=255)
aaCTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGc > 1:2659361/1‑93 (MQ=255)
aaCTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGc < 2:5376001/93‑1 (MQ=255)
aCTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCa < 2:1390165/93‑1 (MQ=255)
tGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCAGa > 1:5755617/1‑93 (MQ=255)
gACAGAGGCCGCGCGCCCGGTGCTGCGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCAGaa > 2:3462609/1‑93 (MQ=255)
aCAGAGGCCGCGCGCCCGGTGCTGCGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCAGaaa < 1:4759993/93‑1 (MQ=255)
aCAGAGGCCGCGCGCCCGGTGCTGCGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCAGaaa < 1:3240661/93‑1 (MQ=255)
aCAGAGGCCGCGCGCCCGGTGCTGCGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCAGaaa > 1:5284617/1‑93 (MQ=255)
cAGAGGCCGCGCGCCCGTTGCTGCGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCAGAAAt < 2:2037664/93‑1 (MQ=255)
cAGAGGCCGCGCGCCCGGTGCTGCGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCAGAAAt < 1:3180982/93‑1 (MQ=255)
agagGCCGCGCGCCCGGTGCTGCGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCAGAAATc > 2:1952046/1‑93 (MQ=255)
gagGCCGCGCGCCCGGTGCTGCGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCAGAAATCg > 1:4388157/1‑93 (MQ=255)
gagGCCGCGCGCCCGGTGCTGCGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCAGAAATCg > 2:3234725/1‑93 (MQ=255)
ggCCGCGCGCCCGGTGCTGCGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCAGAAATCGtt > 1:6353530/1‑93 (MQ=255)
cgcgcgCCCGGTGCTGCGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCAGAAATCGTTcgg < 2:5546961/93‑1 (MQ=255)
cgcgcgCCCGGTGCTGCGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCAGAAATCGTTcgg > 2:5153682/1‑93 (MQ=255)
gcgcgcCCGGTGCTGCGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCAGAAATCGTTcggc > 1:3944096/1‑93 (MQ=255)
gcgcCCGGTGCTGCGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCAGAAATCGTTcggcgg < 1:4536870/93‑1 (MQ=255)
cgcCCGGTGCTGCGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCAGAAATCGCTCggcggc > 2:1042163/1‑93 (MQ=255)
cccGGTGCTGCGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCAGAAATCGTTCGGCGGCaa > 1:245047/1‑93 (MQ=255)
cccGGTGCTGCGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCAGAAATCGTTCGGCGGCaa < 2:2097224/93‑1 (MQ=255)
|
CGTGATCCGCCAGCTGATTCACCTCGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCT‑CGCG‑‑GAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCAGAAATCGTTCGGCGGCAA > NC_000913/4004887‑4005060
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGTGATCCGCCAGCTGATTCACCTCGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCT‑‑‑‑CGCG‑‑GAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCAGAAATCGTTCGGCGGCAACTA > NC_000913/4004887‑4005063
|
CGTGATCCGCCAGCTGATTCACCTCGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCT‑‑‑‑G < SRR4302547.5250618/94‑1 (MQ=60)
CGTGATCCGCCAGCTGATTCACCTCGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGACGCGCGCCCGGTGCT‑‑‑‑G > SRR4302547.5761466/1‑94 (MQ=60)
GTGATCCGCCAGCTGATTCACCTCGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTgc < SRR4302547.3428076/94‑3 (MQ=60)
TGATCCGCCAGCTGATTCACCTCGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCT‑‑‑‑‑GCG > SRR4302547.5153931/1‑94 (MQ=60)
GATCCGCCAGCTGATTCACCTCGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGC > SRR4302547.4163139/1‑94 (MQ=60)
ATCCGCCAGCTGATTCACCTCGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCG < SRR4302547.4438678/94‑1 (MQ=60)
CCGCCAGCTGATTCACCTCGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTgcgcggc < SRR4302547.5346824/94‑8 (MQ=60)
CCGCCAGCTGATTCACCTCGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTgcgcggc > SRR4302547.6430786/1‑87 (MQ=60)
TGCCAGCTGATTCACCTCGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTgcgcggcg > SRR4302547.3883961/1‑86 (MQ=60)
CGCCAGCTGATTCACCTCGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTgcgcggcg < SRR4302547.3947707/94‑9 (MQ=60)
GCCAGCTGATTCACCTCGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTgcgcggcga > SRR4302547.1082522/1‑85 (MQ=60)
GCCAGCTGATTCACCTCGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTgcgcggcga > SRR4302547.1577941/1‑85 (MQ=60)
CCAGCTGATTCACCTCGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTgcgcggcgaa > SRR4302547.886009/1‑84 (MQ=60)
CAGCTGATTCACCTCGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTgcgcggcgaat > SRR4302547.6756232/1‑83 (MQ=60)
AGCTGATTCACCTCGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTgcgcggcgaatc < SRR4302547.5767343/94‑13 (MQ=60)
AGCTGATTCACCTCGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTgcgcggcgaatc > SRR4302547.3399332/1‑82 (MQ=60)
GCTGATTCACCTCGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTgcgcggcgaatcc < SRR4302547.3638125/94‑14 (MQ=60)
CTGATTCACCTCGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTgcgcggcggatcct > SRR4302547.24372/1‑80 (MQ=60)
CTGATTCACCTCGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCT > SRR4302547.1293006/1‑94 (MQ=60)
GATTCACCTCGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCT > SRR4302547.898792/1‑94 (MQ=60)
GATTCACCTCGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCT > SRR4302547.5139251/1‑94 (MQ=60)
GATTCACCTCGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCT < SRR4302547.3827849/94‑1 (MQ=60)
GATTCACCTCGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCT > SRR4302547.5413333/1‑94 (MQ=60)
GATTCACCTCGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCT > SRR4302547.4500772/1‑94 (MQ=60)
GATTCACCTCGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCT > SRR4302547.433660/1‑94 (MQ=60)
ATTCACCTCGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTT < SRR4302547.4845930/94‑1 (MQ=60)
ATTCACCTCGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTT > SRR4302547.2056048/1‑94 (MQ=60)
TTCACCTCGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTT < SRR4302547.6146541/94‑1 (MQ=60)
TTCACCTCGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTT < SRR4302547.5459403/94‑1 (MQ=60)
ACCTCGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCA > SRR4302547.5273996/1‑94 (MQ=60)
CCTCGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAA > SRR4302547.2902034/1‑94 (MQ=60)
CCTCGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAA > SRR4302547.3940533/1‑94 (MQ=60)
CTCGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAAC < SRR4302547.3295284/94‑1 (MQ=60)
CTCGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAAC < SRR4302547.5426669/94‑1 (MQ=60)
CGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTT > SRR4302547.3510337/1‑94 (MQ=60)
GGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTG < SRR4302547.4499093/94‑1 (MQ=60)
GGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTG < SRR4302547.2912766/94‑1 (MQ=60)
GGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTG < SRR4302547.2049730/94‑1 (MQ=60)
GCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGC < SRR4302547.3827288/94‑1 (MQ=60)
CCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCC < SRR4302547.2766003/94‑1 (MQ=60)
CCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCC > SRR4302547.3984570/1‑94 (MQ=60)
CCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCC > SRR4302547.3605017/1‑94 (MQ=60)
CCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCC > SRR4302547.6597950/1‑94 (MQ=60)
CTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCG > SRR4302547.3428424/1‑94 (MQ=60)
TGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGT > SRR4302547.2009571/1‑94 (MQ=60)
TGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGC > SRR4302547.4656028/1‑94 (MQ=60)
GGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTG < SRR4302547.5189091/94‑1 (MQ=60)
GGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTG < SRR4302547.2991221/94‑1 (MQ=60)
GGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTG < SRR4302547.960974/94‑1 (MQ=60)
GGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTG < SRR4302547.3114001/94‑1 (MQ=60)
GGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTG > SRR4302547.2310269/1‑94 (MQ=60)
GTTACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGC > SRR4302547.4292361/1‑94 (MQ=60)
GTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGC > SRR4302547.3816116/1‑94 (MQ=60)
GTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGC < SRR4302547.1160963/94‑1 (MQ=60)
GTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGC > SRR4302547.2854309/1‑94 (MQ=60)
GACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCG < SRR4302547.6303457/94‑1 (MQ=60)
GACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCG > SRR4302547.4568500/1‑94 (MQ=60)
GACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCG < SRR4302547.4789998/94‑1 (MQ=60)
ACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGC < SRR4302547.5100255/94‑1 (MQ=60)
ACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGC > SRR4302547.3642078/1‑94 (MQ=60)
ACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGC > SRR4302547.3728671/1‑94 (MQ=60)
CGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCG < SRR4302547.3594579/94‑1 (MQ=60)
GCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGT < SRR4302547.1696674/94‑1 (MQ=60)
GCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGT > SRR4302547.5431655/1‑94 (MQ=60)
CAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTA > SRR4302547.4989889/1‑94 (MQ=60)
CAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTA > SRR4302547.3873698/1‑94 (MQ=60)
CAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTA < SRR4302547.5131682/94‑1 (MQ=60)
AAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTAT < SRR4302547.3095755/94‑1 (MQ=60)
AAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATC < SRR4302547.1206808/94‑1 (MQ=60)
AAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATC < SRR4302547.6470022/94‑1 (MQ=60)
AATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCG < SRR4302547.1609757/94‑1 (MQ=60)
ATATTGCCCAGCATTCTGCCGTACAACTGACAGAGGCCGCGCGCCTGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGT < SRR4302547.4048411/94‑1 (MQ=60)
ATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGT > SRR4302547.5179625/1‑94 (MQ=60)
ATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGT > SRR4302547.2038031/1‑94 (MQ=60)
TATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTG < SRR4302547.976734/94‑1 (MQ=60)
TATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTG < SRR4302547.3808977/94‑1 (MQ=60)
ATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGG > SRR4302547.3053425/1‑94 (MQ=60)
TTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGC < SRR4302547.2054040/94‑1 (MQ=60)
TGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCG < SRR4302547.2331566/94‑1 (MQ=60)
GCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGC > SRR4302547.4147844/1‑94 (MQ=60)
CCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCT < SRR4302547.3270411/94‑1 (MQ=60)
CCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCT > SRR4302547.4340874/1‑94 (MQ=60)
CCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTC > SRR4302547.2581427/1‑94 (MQ=60)
CCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTC > SRR4302547.5684397/1‑94 (MQ=60)
CAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCA < SRR4302547.4618459/94‑1 (MQ=60)
CAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCA > SRR4302547.5153215/1‑94 (MQ=60)
CATTCTGCCCTACACCTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAAC < SRR4302547.4060243/94‑1 (MQ=60)
CATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAAC > SRR4302547.910026/1‑94 (MQ=60)
CATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAAC < SRR4302547.76944/94‑1 (MQ=60)
CATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAAC < SRR4302547.2246829/94‑1 (MQ=60)
CATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAAC > SRR4302547.5923836/1‑94 (MQ=60)
ATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACC > SRR4302547.6369164/1‑94 (MQ=60)
ATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACC < SRR4302547.6554621/94‑1 (MQ=60)
TCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGA < SRR4302547.2441347/94‑1 (MQ=60)
CTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAA < SRR4302547.552529/94‑1 (MQ=60)
CTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAA > SRR4302547.3597528/1‑94 (MQ=60)
CTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAA < SRR4302547.4178149/94‑1 (MQ=60)
TGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAA < SRR4302547.5681308/94‑1 (MQ=60)
TGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAA > SRR4302547.5343863/1‑94 (MQ=60)
GCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAG > SRR4302547.5279524/1‑94 (MQ=60)
GCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAG < SRR4302547.2522943/94‑1 (MQ=60)
CCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGC < SRR4302547.2912206/94‑1 (MQ=60)
CCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCG > SRR4302547.2173553/1‑94 (MQ=60)
CCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCG < SRR4302547.3768243/94‑1 (MQ=60)
CCTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCG < SRR4302547.1380776/94‑1 (MQ=60)
CTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGA > SRR4302547.5544926/1‑94 (MQ=60)
CTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGA > SRR4302547.71223/1‑94 (MQ=60)
CTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGA > SRR4302547.1089679/1‑94 (MQ=60)
CTACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGA > SRR4302547.4847058/1‑94 (MQ=60)
TACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGAT < SRR4302547.713502/94‑1 (MQ=60)
ACAACTGACAGAGGCGGCGCGCCCGGTGCTGAGAGGC‑‑‑GAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGGTCAAACCGAAAGCGATG < SRR4302547.452859/94‑1 (MQ=60)
ACAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATG > SRR4302547.6587828/1‑94 (MQ=60)
CAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGC < SRR4302547.2971331/94‑1 (MQ=60)
CAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGC > SRR4302547.5898077/1‑94 (MQ=60)
CAACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGC > SRR4302547.2712801/1‑94 (MQ=60)
AACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGTA < SRR4302547.1168204/94‑1 (MQ=60)
AACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCA < SRR4302547.4492252/94‑1 (MQ=60)
AACTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCA > SRR4302547.1161355/1‑94 (MQ=60)
CTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCAGA < SRR4302547.243860/94‑1 (MQ=60)
CTGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCAGA > SRR4302547.5874612/1‑94 (MQ=60)
TGACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCAGAA < SRR4302547.361831/94‑1 (MQ=60)
GACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCAGAAA > SRR4302547.5393618/1‑94 (MQ=60)
GACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCAGAAA < SRR4302547.6588182/94‑1 (MQ=60)
ACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGCTGCAGAAAT > SRR4302547.63440/1‑94 (MQ=60)
ACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCAGAAAT < SRR4302547.4858616/94‑1 (MQ=60)
ACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCAGAAAT < SRR4302547.3305348/94‑1 (MQ=60)
ACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCAGAAAT < SRR4302547.1521163/94‑1 (MQ=60)
ACAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCAGAAAT < SRR4302547.923249/94‑1 (MQ=60)
CAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCAGAAATC < SRR4302547.589975/94‑1 (MQ=60)
CAGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCAGAAATC < SRR4302547.3244378/94‑1 (MQ=60)
AGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCAGAAATCG > SRR4302547.5493723/1‑94 (MQ=60)
AGAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCAGAAATCG > SRR4302547.4478438/1‑94 (MQ=60)
GAGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAGCTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCAGAAATCGT < SRR4302547.3151687/94‑1 (MQ=60)
AGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCAGAAATCGTT > SRR4302547.6485956/1‑94 (MQ=60)
AGGCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCAGAAATCGTT < SRR4302547.4374479/94‑1 (MQ=60)
GCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCAGAAATCGTTCG < SRR4302547.1854762/94‑1 (MQ=60)
GCCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCAGAAATCGTTCG < SRR4302547.6507308/94‑1 (MQ=60)
CCGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCAGAAATCGTTCGG > SRR4302547.4508862/1‑94 (MQ=60)
CGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAGAGCGATGCAGAAATCGTTCGGC > SRR4302547.4773086/1‑94 (MQ=60)
CGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCAGAAATCGTTCGGC > SRR4302547.4024316/1‑94 (MQ=60)
CGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCAGAAATCGTTCGGC > SRR4302547.2778484/1‑94 (MQ=60)
CGCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCAGAAATCGTTCGGC < SRR4302547.2919627/94‑1 (MQ=60)
GCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCAGAAATCGTTCGGAG > SRR4302547.1776/1‑94 (MQ=60)
GCGCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGACGCAGAAATCGTTCGGCG < SRR4302547.4859274/94‑1 (MQ=60)
GCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCAGAAATCGTTCGGCGGC < SRR4302547.4630641/94‑1 (MQ=60)
GCGCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCAGAAATCGTTCGGCGGC > SRR4302547.60970/1‑94 (MQ=60)
GCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCAGAAATCGTTCGGCGGCAA > SRR4302547.249626/1‑94 (MQ=60)
GCCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCAGAAATCGTTCGGCGGCAA > SRR4302547.5185560/1‑94 (MQ=60)
CCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCAGAAATCGTTCGGCGGCAAC > SRR4302547.3277981/1‑94 (MQ=60)
CCCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCAGAAATCGTTCGGCGGCAAC > SRR4302547.5194239/1‑94 (MQ=60)
CCGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCAGAAATCGTTCGGCGGCAACT > SRR4302547.2840057/1‑94 (MQ=60)
CGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCAGAAATCGTTCGGCGGCAACTA < SRR4302547.1476296/94‑1 (MQ=60)
CGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCAGAAATCGTTCGGCGGCAACTA > SRR4302547.6023882/1‑94 (MQ=60)
CGGTGCTG‑‑‑CGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCAGAAATCGTTCGGCGGCAACTA > SRR4302547.5228426/1‑94 (MQ=60)
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CGTGATCCGCCAGCTGATTCACCTCGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCT‑‑‑‑CGCG‑‑GAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCAGAAATCGTTCGGCGGCAACTA > NC_000913/4004887‑4005063
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |