Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
593 |
264.2 |
13311096 |
97.8% |
13018251 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,013,176 |
C→G |
G182R (GGA→CGA) |
ysgA ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,013,176 | 0 | C | G | 100.0%
| 950.0
/ NA
| 258 | G182R (GGA→CGA) | ysgA | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base G (146/112); total (146/112) |
Only 100 of 261 total aligned reads displayed.
TTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCCG‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCACGCCAC > NC_000913/4013092‑4013260
|
ttAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTa < 2:3342508/93‑1 (MQ=255)
ttAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGACGAGAATCGGCGCGTTa > 1:2668238/1‑93 (MQ=255)
gcagcCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGa > 2:5884593/1‑93 (MQ=255)
gcagcCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGa > 2:5141281/1‑93 (MQ=255)
cagcCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGAt > 2:1645728/1‑93 (MQ=255)
cagcCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGAt < 2:3131239/93‑1 (MQ=255)
cagcCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGAt < 1:5778798/93‑1 (MQ=255)
agcCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATc > 1:4064486/1‑93 (MQ=255)
gcCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCg < 1:5892951/93‑1 (MQ=255)
gcCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCg > 1:2489057/1‑93 (MQ=255)
gcCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCg > 1:1411311/1‑93 (MQ=255)
gcCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCg > 1:2057008/1‑93 (MQ=255)
gcCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCg > 2:5946801/1‑93 (MQ=255)
cccGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCgg > 1:3162519/1‑93 (MQ=255)
ccGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGt < 2:6141288/93‑1 (MQ=255)
cGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGtt < 1:2143662/93‑1 (MQ=255)
cGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGtt < 2:4162890/93‑1 (MQ=255)
cGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGtt < 2:924545/93‑1 (MQ=255)
gCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTg < 2:555722/93‑1 (MQ=255)
gCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTg < 1:6401800/93‑1 (MQ=255)
aGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCg < 2:4621699/93‑1 (MQ=255)
aGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGACGAGAATCGGCGCGTTAAGATCGGTTGCg > 2:3446237/1‑93 (MQ=255)
gcgcCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGa > 1:6231893/1‑93 (MQ=255)
gcgcCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGa < 1:4350489/93‑1 (MQ=255)
gcCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGata < 1:3973448/93‑1 (MQ=255)
ccTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGatat > 2:5348887/1‑93 (MQ=255)
cTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGatata > 2:3777592/1‑92 (MQ=255)
cTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATc > 2:2121349/1‑93 (MQ=255)
cTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATc < 1:3643779/93‑1 (MQ=255)
ggCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCaa < 2:3843651/93‑1 (MQ=255)
cATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAgg > 1:5370266/1‑93 (MQ=255)
cATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAgg < 2:1943906/93‑1 (MQ=255)
cATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAgg > 2:3169663/1‑93 (MQ=255)
aTGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGgt < 2:4842073/93‑1 (MQ=255)
aTGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGgt < 1:1281569/93‑1 (MQ=255)
tGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGgtt < 2:5799597/93‑1 (MQ=255)
tGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGgtt > 2:2480848/1‑93 (MQ=255)
ggTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGgttg < 1:367770/93‑1 (MQ=255)
gTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGgttgt > 2:4137702/1‑93 (MQ=255)
gTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGgttgt < 1:4216401/93‑1 (MQ=255)
gTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGgttgt < 2:2984587/93‑1 (MQ=255)
ttCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGttt < 2:3925433/93‑1 (MQ=255)
tCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTc < 1:4370983/93‑1 (MQ=255)
tCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGGTTc > 1:2400247/1‑93 (MQ=255)
cAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCg < 2:4585357/93‑1 (MQ=255)
cAACGCGCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCg < 1:1331229/93‑1 (MQ=255)
aCGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGTCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGt > 2:3561879/1‑93 (MQ=255)
aCGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGt < 2:1017946/93‑1 (MQ=255)
gCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGa < 2:805335/93‑1 (MQ=255)
gCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGa < 1:2309446/93‑1 (MQ=255)
ctcCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAAtt < 1:102949/93‑1 (MQ=255)
ctcCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAAtt > 2:6337603/1‑93 (MQ=255)
tcCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTc > 2:739051/1‑93 (MQ=255)
ccTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCa < 2:427085/93‑1 (MQ=255)
cTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAg > 2:1011014/1‑93 (MQ=255)
cTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAg < 1:6042467/93‑1 (MQ=255)
tGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGc < 1:1655718/93‑1 (MQ=255)
tGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGc > 2:3439880/1‑93 (MQ=255)
tGCGAAATGCTGTTATCTGCACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGc < 1:5647674/93‑1 (MQ=255)
ggAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGAc > 2:482084/1‑93 (MQ=255)
ggAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCACGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGAc > 2:4673204/1‑93 (MQ=255)
gAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACt > 2:5021053/1‑93 (MQ=255)
gAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACt > 1:1518264/1‑93 (MQ=255)
gAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACt < 1:4884763/93‑1 (MQ=255)
aaTGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACtt > 1:4501922/1‑93 (MQ=255)
aTGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTg > 2:1128424/1‑93 (MQ=255)
tGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGt > 2:4895620/1‑93 (MQ=255)
tGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGt < 1:5767425/93‑1 (MQ=255)
cTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCg < 2:5279221/93‑1 (MQ=255)
cTGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCg > 2:2305369/1‑93 (MQ=255)
tGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGc > 2:4727362/1‑93 (MQ=255)
tGTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGc > 2:4052285/1‑93 (MQ=255)
gTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTTAGCGACTTGTCGcc > 1:3481479/1‑93 (MQ=255)
gTTATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGcc > 2:2399237/1‑93 (MQ=255)
ttATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGccc < 1:4944679/93‑1 (MQ=255)
ttATCCTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGccc < 1:2093832/93‑1 (MQ=255)
ccTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCa > 1:5963652/1‑93 (MQ=255)
cTGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAg > 1:4825343/1‑93 (MQ=255)
tGACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGt < 2:2918205/93‑1 (MQ=255)
gACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGtt > 1:1759038/1‑93 (MQ=255)
gACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGtt < 1:2610298/93‑1 (MQ=255)
gACCACCATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGtt < 1:2937979/93‑1 (MQ=255)
gACCACCATATAAGACGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGtt > 1:4153239/1‑93 (MQ=255)
accaccATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGttt > 2:2819635/1‑93 (MQ=255)
accaccATATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGttt > 2:2081054/1‑93 (MQ=255)
ccaccaTATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTg > 1:1119356/1‑93 (MQ=255)
ccaccaTATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTg > 1:6614805/1‑93 (MQ=255)
caccaTATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGc > 2:5242741/1‑93 (MQ=255)
accaTATAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGcc < 1:3244097/93‑1 (MQ=255)
atatAAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTa > 1:1807626/1‑93 (MQ=255)
tataAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTAc > 2:4421316/1‑93 (MQ=255)
tataAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTAc > 2:2618346/1‑93 (MQ=255)
tataAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTAc > 1:2791213/1‑93 (MQ=255)
taAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCa > 2:3716509/1‑93 (MQ=255)
taAGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCa < 2:6398757/93‑1 (MQ=255)
aaGCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCAc < 1:3057353/93‑1 (MQ=255)
gCCGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCACGc < 1:810694/93‑1 (MQ=255)
cGAGAATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCACGCCa < 1:3845824/93‑1 (MQ=255)
gagaATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCACGCCAc < 2:2589497/93‑1 (MQ=255)
gagaATCGGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCACGCCAc < 2:1200445/93‑1 (MQ=255)
|
TTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCCG‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCACGCCAC > NC_000913/4013092‑4013260
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCCG‑‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCACGCCACT > NC_000913/4013083‑4013261
|
GCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCG < SRR4302547.3896698/94‑1 (MQ=60)
GCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCG < SRR4302547.343514/94‑1 (MQ=60)
GCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCG > SRR4302547.175434/1‑94 (MQ=60)
GCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCG < SRR4302547.3728483/94‑1 (MQ=60)
CTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGG < SRR4302547.1989282/94‑1 (MQ=60)
CTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGG > SRR4302547.4543449/1‑94 (MQ=60)
TTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGACGAGAAT‑CG‑‑GC > SRR4302547.6793989/1‑94 (MQ=60)
TTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAAT‑CG‑‑GCG > SRR4302547.5015699/1‑94 (MQ=60)
TTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAAT‑CG‑‑GCG > SRR4302547.5744662/1‑94 (MQ=60)
TTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAAT‑CG‑‑GCG > SRR4302547.6697134/1‑94 (MQ=60)
ATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGACGAGAATCGGC‑GCGTTA > SRR4302547.2721851/1‑94 (MQ=60)
TTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAA < SRR4302547.523308/94‑1 (MQ=60)
TTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAA < SRR4302547.1787618/94‑1 (MQ=60)
ccagcccgcgccgctTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCCCCATATAAGCCGAGAA‑CCGGCGCGTTAAGAT < SRR4302547.3599331/79‑1 (MQ=60)
GCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGAT < SRR4302547.450329/94‑1 (MQ=60)
GCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGAT < SRR4302547.538584/94‑1 (MQ=60)
CAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATC > SRR4302547.4999842/1‑94 (MQ=60)
CAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATC > SRR4302547.4147036/1‑94 (MQ=60)
CAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATC < SRR4302547.2652399/94‑1 (MQ=60)
CAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATC > SRR4302547.3013683/1‑94 (MQ=60)
CAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATC < SRR4302547.5898326/94‑1 (MQ=60)
CAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATC < SRR4302547.3446685/94‑1 (MQ=60)
AGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCG > SRR4302547.6025373/1‑94 (MQ=60)
AGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCG > SRR4302547.2098053/1‑94 (MQ=60)
AGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCG > SRR4302547.1423230/1‑94 (MQ=60)
AGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCG > SRR4302547.6283206/1‑94 (MQ=60)
AGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCG > SRR4302547.1439542/1‑94 (MQ=60)
AGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCG > SRR4302547.2539344/1‑94 (MQ=60)
AGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGACGAGAATCGGC‑GCGTTAAGATCG > SRR4302547.3721724/1‑94 (MQ=60)
GCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGG < SRR4302547.6014958/94‑1 (MQ=60)
GCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGG > SRR4302547.3225439/1‑94 (MQ=60)
CCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAACGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGT > SRR4302547.4182628/1‑94 (MQ=60)
CGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTG < SRR4302547.2186423/94‑1 (MQ=60)
CGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTG < SRR4302547.2384567/94‑1 (MQ=60)
CGCAGCGCCTGGCACATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTG < SRR4302547.5969329/94‑1 (MQ=60)
GCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGC > SRR4302547.3019310/1‑94 (MQ=60)
GCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGC < SRR4302547.6535335/94‑1 (MQ=60)
GCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGACGAGAATCGGC‑GCGTTAAGATCGGTTGC > SRR4302547.2105217/1‑94 (MQ=60)
AGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGA > SRR4302547.3999152/1‑94 (MQ=60)
AGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGA > SRR4302547.6361355/1‑94 (MQ=60)
GCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGAT < SRR4302547.4439877/94‑1 (MQ=60)
GCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATAT < SRR4302547.4054253/94‑1 (MQ=60)
GCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATAT > SRR4302547.5815453/1‑94 (MQ=60)
CCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATC > SRR4302547.3640364/1‑94 (MQ=60)
CTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCA < SRR4302547.3718094/94‑1 (MQ=60)
GGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAAC < SRR4302547.3444696/94‑1 (MQ=60)
CGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAG < SRR4302547.6723593/94‑1 (MQ=60)
GCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGG < SRR4302547.794199/94‑1 (MQ=60)
GCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGG > SRR4302547.5481095/1‑94 (MQ=60)
CATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGT > SRR4302547.4134259/1‑94 (MQ=60)
CATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGT > SRR4302547.4590839/1‑94 (MQ=60)
CATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGT < SRR4302547.1385234/94‑1 (MQ=60)
CATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGT > SRR4302547.2743773/1‑94 (MQ=60)
CATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGT > SRR4302547.1669630/1‑94 (MQ=60)
ATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTT < SRR4302547.1307392/94‑1 (MQ=60)
ATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTT < SRR4302547.4240556/94‑1 (MQ=60)
GGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGT < SRR4302547.374588/94‑1 (MQ=60)
GGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGT < SRR4302547.4071847/94‑1 (MQ=60)
GTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTT < SRR4302547.4302473/94‑1 (MQ=60)
TTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGGTTC > SRR4302547.2448862/1‑94 (MQ=60)
TCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCG < SRR4302547.4460777/94‑1 (MQ=60)
CAACGCGCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGG < SRR4302547.1357986/94‑1 (MQ=60)
AACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGT > SRR4302547.6428218/1‑94 (MQ=60)
GCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAA < SRR4302547.2356276/94‑1 (MQ=60)
CTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAAT > SRR4302547.2538336/1‑94 (MQ=60)
CTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTC < SRR4302547.4431883/94‑1 (MQ=60)
CTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTC > SRR4302547.6053191/1‑94 (MQ=60)
CTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTC < SRR4302547.104832/94‑1 (MQ=60)
CCCTGCGTAATGTTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCA < SRR4302547.1757007/94‑1 (MQ=60)
ccggcgaaagtCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAG < SRR4302547.3608710/83‑1 (MQ=60)
CTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGC < SRR4302547.3837435/94‑1 (MQ=60)
CTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGC < SRR4302547.6167848/94‑1 (MQ=60)
TGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCG < SRR4302547.3240280/94‑1 (MQ=60)
TGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCG < SRR4302547.1688377/94‑1 (MQ=60)
TGCGAAATGCTGTTATCTGCACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCG < SRR4302547.5764247/94‑1 (MQ=60)
GCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGA < SRR4302547.969344/94‑1 (MQ=60)
CGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGAC > SRR4302547.5536616/1‑94 (MQ=60)
GGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACT > SRR4302547.2803738/1‑94 (MQ=60)
GGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACT < SRR4302547.2140422/94‑1 (MQ=60)
GGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACT > SRR4302547.5897976/1‑94 (MQ=60)
GGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACT > SRR4302547.1765720/1‑94 (MQ=60)
GGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACT > SRR4302547.1548504/1‑94 (MQ=60)
GAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTT < SRR4302547.4985961/94‑1 (MQ=60)
GAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTT > SRR4302547.4594900/1‑94 (MQ=60)
AATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTG > SRR4302547.430400/1‑94 (MQ=60)
AATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTG < SRR4302547.591075/94‑1 (MQ=60)
AATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTG < SRR4302547.4442343/94‑1 (MQ=60)
ATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGT < SRR4302547.1249595/94‑1 (MQ=60)
ATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGT > SRR4302547.2511502/1‑94 (MQ=60)
ATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGT > SRR4302547.5803211/1‑94 (MQ=60)
TGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTC < SRR4302547.1129114/94‑1 (MQ=60)
TGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTC < SRR4302547.5886701/94‑1 (MQ=60)
GCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCG < SRR4302547.493691/94‑1 (MQ=60)
GCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCG < SRR4302547.213259/94‑1 (MQ=60)
TGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTTAGCGACTTGTCGCC > SRR4302547.3552496/1‑94 (MQ=60)
TGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCC < SRR4302547.6311594/94‑1 (MQ=60)
TTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCG < SRR4302547.2135567/94‑1 (MQ=60)
TTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCG < SRR4302547.5047080/94‑1 (MQ=60)
TATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGT > SRR4302547.1474514/1‑94 (MQ=60)
TATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGT > SRR4302547.720059/1‑94 (MQ=60)
ATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTC > SRR4302547.1802448/1‑94 (MQ=60)
ATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTC < SRR4302547.1265247/94‑1 (MQ=60)
ATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTC > SRR4302547.6141193/1‑94 (MQ=60)
TCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCA < SRR4302547.6652662/94‑1 (MQ=60)
TCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCA < SRR4302547.5628745/94‑1 (MQ=60)
TCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCA > SRR4302547.6087333/1‑94 (MQ=60)
CCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAG > SRR4302547.4925385/1‑94 (MQ=60)
CCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAG > SRR4302547.1907798/1‑94 (MQ=60)
CCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAG < SRR4302547.1945866/94‑1 (MQ=60)
TGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTT > SRR4302547.1793889/1‑94 (MQ=60)
TGACCACCATATAAGACGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTT > SRR4302547.4237841/1‑94 (MQ=60)
GACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTT < SRR4302547.2996520/94‑1 (MQ=60)
GACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTT < SRR4302547.2662904/94‑1 (MQ=60)
ACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTG > SRR4302547.2216476/1‑94 (MQ=60)
ACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTG > SRR4302547.1141915/1‑94 (MQ=60)
ACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTG > SRR4302547.6752489/1‑94 (MQ=60)
ACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTG > SRR4302547.2238088/1‑94 (MQ=60)
CACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCC > SRR4302547.3829103/1‑94 (MQ=60)
ACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCG > SRR4302547.4647260/1‑94 (MQ=60)
ACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCG < SRR4302547.3308892/94‑1 (MQ=60)
CATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTA > SRR4302547.1843351/1‑94 (MQ=60)
CATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTA > SRR4302547.3628290/1‑94 (MQ=60)
ATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTAC > SRR4302547.1483500/1‑94 (MQ=60)
ATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTAC > SRR4302547.2847109/1‑94 (MQ=60)
ATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCA < SRR4302547.3140699/94‑1 (MQ=60)
TAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCAC < SRR4302547.2930950/94‑1 (MQ=60)
AAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCAac > SRR4302547.2685923/1‑92 (MQ=60)
AAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCACG < SRR4302547.3118195/94‑1 (MQ=60)
AGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCACGC > SRR4302547.2627097/1‑94 (MQ=60)
GCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCACGCC < SRR4302547.1314422/94‑1 (MQ=60)
GCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCACGCC < SRR4302547.826055/94‑1 (MQ=60)
GCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCACGCC < SRR4302547.4899092/94‑1 (MQ=60)
CCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCACGCCA > SRR4302547.502061/1‑94 (MQ=60)
CGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCACGCCAC < SRR4302547.3924126/94‑1 (MQ=60)
GAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCACGCCACT < SRR4302547.3193587/94‑1 (MQ=60)
GAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCACGCCACT > SRR4302547.4527702/1‑94 (MQ=60)
|
GCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCCG‑‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCACGCCACT > NC_000913/4013083‑4013261
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 5 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
