Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
593 |
264.2 |
13311096 |
97.8% |
13018251 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,075,331 |
A→G |
L101L (TTA→TTG) |
yiiD → |
putative acetyltransferase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,075,331 | 0 | A | G | 84.1%
| 660.5
/ 114.8
| 272 | L101L (TTA→TTG) | yiiD | putative acetyltransferase |
| Reads supporting (aligned to +/- strand): ref base A (26/17); new base G (116/112); total (143/129) |
| Fisher's exact test for biased strand distribution p-value = 3.18e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.64e-01 |
Only 100 of 279 total aligned reads displayed.
GGTGGCGGTAGGCCGACTGTATATTAATGCCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTAGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTGACCTGTAGCGCCCGTGAAGACGCGGTGGAGT > NC_000913/4075241‑4075422
|
cGGTAGGCCGACTGTATATTAATGCCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGc < 1:574439/93‑1 (MQ=255)
tAGGCCGACTGTATATTAATGCCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGa < 2:1915726/93‑1 (MQ=255)
aGGCCGACTGTATATTAATGCCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGAt < 2:5703673/93‑1 (MQ=255)
aGGCCGACTGTATATTAATGCCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGAt > 1:5542286/1‑93 (MQ=255)
aGGCCGACTGTATATTAATGCCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGAt < 1:1407761/93‑1 (MQ=255)
aGGCCGACTGTATATTAATGCCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTAGGCACGCTGAt < 2:5979562/93‑1 (MQ=255)
aGGCCGACTGTATATTAATGCCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTAGGCACGCTGAt < 2:3970590/93‑1 (MQ=255)
ggCCGACTGTATATTAATGCCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACACAGGGTTGTGCACGCTGATg > 1:5945943/1‑93 (MQ=255)
ggCCGACTGTATATTAATGCCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGTACGCTGATg < 2:3805231/93‑1 (MQ=255)
ggCCGACTGTATATTAATGCCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATg < 2:5866615/93‑1 (MQ=255)
ggCCGACTGTATATTAATGCCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATg < 1:6115456/93‑1 (MQ=255)
gCCGACTGTATATTAATGCCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTAGGCACGCTGATgg > 1:119414/1‑93 (MQ=255)
ccGACTGTATATTAATGCCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGc < 1:6611792/93‑1 (MQ=255)
ccGACTGTATATTAATGCCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGc < 2:2004332/93‑1 (MQ=255)
gACTGTATATTAATGCCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGa > 1:1858113/1‑93 (MQ=255)
gACTGTATATTAATGCCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGa < 1:3453224/93‑1 (MQ=255)
gACTGTATATTAATGCCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCACGACGTGCAGGACCAAGGGTTAGGCACGCTGATgcgga > 2:4928195/1‑89 (MQ=255)
aCTGTATATTAATGCCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGAt < 2:4834619/93‑1 (MQ=255)
aCTGTATATTAATGCCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGAt < 1:2019802/93‑1 (MQ=255)
aCTGTATATTAATGCCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGAt < 2:2985391/93‑1 (MQ=255)
cTGTATATTAATGCCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATg < 2:6186467/93‑1 (MQ=255)
tGTATATTAATGCCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGa > 2:3284486/1‑93 (MQ=255)
tGTATATTAATGCCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGa > 2:5125112/1‑93 (MQ=255)
tGTATATTAATGCCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGa < 2:4686106/93‑1 (MQ=255)
gTATATTAATGCCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGAc > 2:1511421/1‑93 (MQ=255)
gTATATTAATGCCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGAc > 2:2474460/1‑93 (MQ=255)
gTATATTAATGCCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTAGGCACGCTGATGGCGATGAc > 1:3176896/1‑93 (MQ=255)
tatTAATGCCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTAGGCACGCTGATGGCGATGACCCt < 1:1326898/93‑1 (MQ=255)
tatGAATGCCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCt < 2:663742/93‑1 (MQ=255)
ttAATGCCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTgg < 1:424146/93‑1 (MQ=255)
tAATGCCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGa > 1:161128/1‑93 (MQ=255)
aaTGCCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAg < 1:997516/93‑1 (MQ=255)
aaTGCCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAg > 2:2863903/1‑93 (MQ=255)
aTGCCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGt < 2:3164518/93‑1 (MQ=255)
ttccGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTc > 2:1081990/3‑93 (MQ=255)
cGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGt < 2:2514286/93‑1 (MQ=255)
aCAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTgg < 1:6380672/93‑1 (MQ=255)
aCAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTgg > 2:1897898/1‑93 (MQ=255)
aaTGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGgcg > 2:5633929/1‑93 (MQ=255)
aaTGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTAGGCACGCTGATGGCGATGACCCTGGAGTCGGTGgcg > 2:6551868/1‑93 (MQ=255)
aaTGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTAGGCACGCTGATGGCGATGACCCTGGAGTCGGTGgcg < 1:3009383/93‑1 (MQ=255)
aaGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTc < 1:6166291/93‑1 (MQ=255)
aGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCa < 2:1951963/93‑1 (MQ=255)
aGCCTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCa < 1:35747/93‑1 (MQ=255)
gCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTAGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAg > 1:29305/1‑93 (MQ=255)
cGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAgg < 1:2487850/93‑1 (MQ=255)
gTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGa > 1:2966140/1‑93 (MQ=255)
gTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGa > 1:2140818/1‑93 (MQ=255)
tCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGaa > 1:6474744/1‑93 (MQ=255)
tCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGaa > 2:6409997/1‑93 (MQ=255)
tCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGGCGGTGGCGCGTCAGGaa > 1:3401479/1‑93 (MQ=255)
tCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTAGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGaa < 1:3902575/93‑1 (MQ=255)
aTTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGc > 1:2467127/1‑93 (MQ=255)
aTTCGCTTTATGGCCGTTCATACCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTTAGGAAGGc > 1:3306949/1‑93 (MQ=255)
ttCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCg < 2:5295793/93‑1 (MQ=255)
ttCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCg < 1:3208/93‑1 (MQ=255)
tCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGt > 2:349831/1‑93 (MQ=255)
tCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGt > 1:1110128/1‑93 (MQ=255)
cGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGtt < 1:6452804/93‑1 (MQ=255)
cGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGtt > 2:5033827/1‑93 (MQ=255)
gCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTa < 2:732206/93‑1 (MQ=255)
cTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTaa < 2:881348/93‑1 (MQ=255)
cTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTaa > 1:6243544/1‑93 (MQ=255)
aTGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAgcgc < 2:2105797/93‑1 (MQ=255)
tGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGcgcg < 2:1726126/93‑1 (MQ=255)
tGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGAACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGcgcg > 1:6557438/1‑93 (MQ=255)
gCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTg > 1:3744498/1‑93 (MQ=255)
cGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTGAc < 1:4563935/93‑1 (MQ=255)
cGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTGAc < 2:1483213/93‑1 (MQ=255)
cGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTGAc > 2:4272892/1‑93 (MQ=255)
gTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTGAcc > 2:5528991/1‑93 (MQ=255)
gTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTGAcc < 2:6061700/93‑1 (MQ=255)
gTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTGAcc > 2:4581761/1‑93 (MQ=255)
gTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTGAcc > 2:4150898/1‑93 (MQ=255)
tCATCCCGACGTGCAGGACAAAGGGTTAGGCACGCTGATGGCGATGACCCTGGAGTTGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTGACCTg < 1:229450/93‑1 (MQ=255)
cATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTGACCTGt > 2:4434256/1‑93 (MQ=255)
cATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTGACCTGt > 1:4179521/1‑93 (MQ=255)
aTCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTGACCTGTa < 1:5216985/93‑1 (MQ=255)
aTCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTGACCTGTa < 1:4714928/93‑1 (MQ=255)
tCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTGACCTGTAg < 1:2721250/93‑1 (MQ=255)
cgcGACGGGCAGGACAAAGAGTTGGGCACGGTGATGGCGATGACCCTGGAGTCGGTGGCGGGTCAGGAAGGCGTTAAGCGCGTGACCTGTAgc < 2:5488118/91‑1 (MQ=255)
aCGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTGACCTGTAGCGccc > 1:5396583/1‑93 (MQ=255)
cGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTGACCTGTAGCGGCCg > 1:2820561/1‑93 (MQ=255)
cGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTGACCTGTAGCGCCCg < 1:3713840/93‑1 (MQ=255)
cGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTGACCTGTAGCGCCCg > 2:35619/1‑93 (MQ=255)
tGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTGACCTGTAGCGCCCGTg > 2:6434594/1‑93 (MQ=255)
tGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTGACCTGTAGCGCCCGTg < 2:3381870/93‑1 (MQ=255)
tGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTGACCTGTAGCGCCCGTg < 2:1614545/93‑1 (MQ=255)
tGCAGGACAAAGGGTTAGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTGACCTGTAGCGCCCGTg > 1:4383486/1‑93 (MQ=255)
cAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTGACCTGTAGCGCCCGTGaa < 1:4990348/93‑1 (MQ=255)
ggACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTGACCTGTAGCGCCCGTGAAGa < 1:1025738/93‑1 (MQ=255)
gACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTGACCTGTAGCGCCCGTGAAGAc < 2:2358070/93‑1 (MQ=255)
aCAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTGACCTGTAGCGCCCGTGAAGAcg < 2:3648444/93‑1 (MQ=255)
aCAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTGACCTGTAGCGCCCGTGAAGAcg < 2:6599460/93‑1 (MQ=255)
cAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTGACCTGTAGCGCCCGTGAAGAcgc < 2:129517/93‑1 (MQ=255)
aGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTGACCTGTAGCGCCCGTGAAGACGCggg > 2:4078339/1‑92 (MQ=255)
aGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTGACCTGTAGCGCCCGTGAAGACGCGGt < 2:1650369/93‑1 (MQ=255)
gTTGGGCACGCTGATGGCGATGACGCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTGACCTGTAGCGCCCGTGAAGACGCGGTGGa < 1:6520747/93‑1 (MQ=255)
gTTAGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTGACCTGTAGCGCCCGTGAAGACGCGGTGGa < 1:788138/93‑1 (MQ=255)
ttAGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTGACCTGTAGCGCCCGTGAAGACGCGGTGGAg > 2:2691284/1‑93 (MQ=255)
|
GGTGGCGGTAGGCCGACTGTATATTAATGCCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTAGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTGACCTGTAGCGCCCGTGAAGACGCGGTGGAGT > NC_000913/4075241‑4075422
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TCTGGTGGCGGTAGGCCGACTGTATATTAATGCCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTAGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTGACCTGTAGCGCCCGTGAAGACGCGGTGGAGTTT > NC_000913/4075238‑4075424
|
TCTGGTGGCGGTAGGCCGACTGTATATTAATGCCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTA < SRR4302547.2753406/94‑1 (MQ=60)
CTGGTGGCGGTAGGCCGACTGTATATTAATGCCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGG < SRR4302547.943491/94‑1 (MQ=60)
GTGGCGGTAGGCCGACTGTATATTAATGCCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCA < SRR4302547.6115476/94‑1 (MQ=60)
CGGTAGGCCGACTGTATATTAATGCCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCT < SRR4302547.584748/94‑1 (MQ=60)
CGGTAGGCCGACTGTATATTAATGCCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCT < SRR4302547.6446979/94‑1 (MQ=60)
CGGTAGGCCGACTGTATATTAATGCCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCT < SRR4302547.4201707/94‑1 (MQ=60)
GTAGGCCGACTGTATATTAATGCCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGA > SRR4302547.5346227/1‑94 (MQ=60)
GTAGGCCGACTGTATATTAATGCCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGA > SRR4302547.6130133/1‑94 (MQ=60)
TAGGCCGACTGTATATTAATGCCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGAT < SRR4302547.2349200/94‑1 (MQ=60)
TAGGCCGACTGTATATTAATGCCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGAT > SRR4302547.5656660/1‑94 (MQ=60)
TAGGCCGACTGGATATTAATGCCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGAT > SRR4302547.666216/1‑94 (MQ=60)
AGGCCGACTGTATATTAATGCCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACACAGGGTTGTGCACGCTGATG > SRR4302547.6069240/1‑94 (MQ=60)
AGGCCGACTGTATATTAATGCCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATG < SRR4302547.1435926/94‑1 (MQ=60)
AGGCCGACTGTATATTAATGCCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATG > SRR4302547.2922753/1‑94 (MQ=60)
AGGCCGACTGTATATTAATGCCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATG < SRR4302547.3861832/94‑1 (MQ=60)
GGCCGACTGTATATTAATGCCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGG < SRR4302547.6242315/94‑1 (MQ=60)
GGCCGACTGTATATTAATGCCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTAGGCACGCTGATGG > SRR4302547.121582/1‑94 (MQ=60)
CCGACTGTATATTAATGCCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCG < SRR4302547.6749413/94‑1 (MQ=60)
CCGACTGTATATTAATGCCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTAGGCACGCTGATGGCG > SRR4302547.209151/1‑94 (MQ=60)
CGACTGTATATTAATGCCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGA > SRR4302547.1894811/1‑94 (MQ=60)
GACTGTATATTAATGCCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGAT < SRR4302547.3523627/94‑1 (MQ=60)
GACTGTATATTAATGCCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGAT > SRR4302547.129903/1‑94 (MQ=60)
GACTCTATATTAATGCCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGAT < SRR4302547.2595333/94‑1 (MQ=60)
ACTGTATATTAATGCCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATTCCGACGTGCAGGACAAAGAGTTGGGCATGCTGATGGCGGTG > SRR4302547.2079649/1‑94 (MQ=60)
ACTGTATATTAATGCCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATG < SRR4302547.2059995/94‑1 (MQ=60)
ACTGTATATTAATGCCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATG < SRR4302547.1212494/94‑1 (MQ=60)
CTGTATATTAATGCCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGA > SRR4302547.657084/1‑94 (MQ=60)
CTGTATATTAATGCCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTAGGCACGCTGATGGCGATGA > SRR4302547.336742/1‑94 (MQ=60)
TGTATATTAATGCCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTAGGCACGCTGATGGCGATGAC > SRR4302547.3240175/1‑94 (MQ=60)
TATATTAATGCCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCC < SRR4302547.3340107/94‑1 (MQ=60)
ATATTAATGCCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCT < SRR4302547.5830596/94‑1 (MQ=60)
ATATTAATGCCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTAGGCACGCTGATGGCGATGACCCT < SRR4302547.6704974/94‑1 (MQ=60)
TATTAATGCCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTG > SRR4302547.6659444/1‑94 (MQ=60)
TATTAATGCCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTAGGCACGCTGATGGCGATGACCCTG < SRR4302547.1353563/94‑1 (MQ=60)
ATTAATGCCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGG > SRR4302547.375813/1‑94 (MQ=60)
TTAATGCCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGA > SRR4302547.5445399/1‑94 (MQ=60)
TTAATGCCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGA < SRR4302547.432011/94‑1 (MQ=60)
TTAATGCCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGA > SRR4302547.164083/1‑94 (MQ=60)
TAATGCCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAG < SRR4302547.2990202/94‑1 (MQ=60)
TAATGCCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAG < SRR4302547.94264/94‑1 (MQ=60)
AATGCCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGT < SRR4302547.1016966/94‑1 (MQ=60)
AATGCCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGT > SRR4302547.3031971/1‑94 (MQ=60)
TGCCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCG < SRR4302547.4526127/94‑1 (MQ=60)
CCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGAGCCTGGAGTCGGT > SRR4302547.2276344/1‑94 (MQ=60)
CCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGT < SRR4302547.442326/94‑1 (MQ=60)
ACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGC < SRR4302547.2009162/94‑1 (MQ=60)
ACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGC < SRR4302547.6513824/94‑1 (MQ=60)
AATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGC < SRR4302547.3505842/94‑1 (MQ=60)
AATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGC > SRR4302547.6644845/1‑94 (MQ=60)
AATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTAGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGC < SRR4302547.3069222/94‑1 (MQ=60)
ATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCG > SRR4302547.2519582/1‑94 (MQ=60)
TGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGT > SRR4302547.4289450/1‑94 (MQ=60)
TGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGT > SRR4302547.5104110/1‑94 (MQ=60)
TGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGT > SRR4302547.2528837/1‑94 (MQ=60)
GAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTC < SRR4302547.573409/94‑1 (MQ=60)
GAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTC > SRR4302547.6704967/1‑94 (MQ=60)
AAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCA < SRR4302547.6294277/94‑1 (MQ=60)
AGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTAGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAG > SRR4302547.29835/1‑94 (MQ=60)
AGCCTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAG < SRR4302547.36400/94‑1 (MQ=60)
CGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGA > SRR4302547.2183513/1‑94 (MQ=60)
CGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGA < SRR4302547.2538111/94‑1 (MQ=60)
CGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGA > SRR4302547.3025172/1‑94 (MQ=60)
GTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAA > SRR4302547.6609556/1‑94 (MQ=60)
GTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGGCGGTGGCGCGTCAGGAA > SRR4302547.3470699/1‑94 (MQ=60)
TCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAG < SRR4302547.2856785/94‑1 (MQ=60)
TCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTAGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAG < SRR4302547.3981938/94‑1 (MQ=60)
CCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGG > SRR4302547.3250490/1‑94 (MQ=60)
CCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGG > SRR4302547.6302467/1‑94 (MQ=60)
CATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGGGCGTCAGGAAGGG > SRR4302547.6495633/1‑94 (MQ=60)
CATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGC > SRR4302547.2516998/1‑94 (MQ=60)
CATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGGCGGTGGCGCGTCAGGAAGGC > SRR4302547.4850872/1‑94 (MQ=60)
CATTCGCTTTATGGCCGTTCATACCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTTAGGAAGGC > SRR4302547.3373614/1‑94 (MQ=60)
ATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCG < SRR4302547.4792864/94‑1 (MQ=60)
ATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCG > SRR4302547.3776930/1‑94 (MQ=60)
ATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTAGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCG > SRR4302547.6793370/1‑94 (MQ=60)
TTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGT > SRR4302547.1132481/1‑94 (MQ=60)
TTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGT < SRR4302547.3257/94‑1 (MQ=60)
CGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTA > SRR4302547.2897650/1‑94 (MQ=60)
CGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTA > SRR4302547.4295943/1‑94 (MQ=60)
CGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTA < SRR4302547.6587225/94‑1 (MQ=60)
CGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGGTA > SRR4302547.6271382/1‑94 (MQ=60)
GCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAA > SRR4302547.6373240/1‑94 (MQ=60)
CTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCcggggtcgggggcggcgcgggggggggggaag > SRR4302547.1105360/1‑62 (MQ=60)
TTTATGGCCGTTCATTCCGAAGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGcaagggaggcggtaagg > SRR4302547.600161/1‑77 (MQ=60)
TTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGC > SRR4302547.119372/1‑94 (MQ=60)
TTTATGCCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGC < SRR4302547.4786863/94‑1 (MQ=60)
TTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTAGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCG > SRR4302547.6516041/1‑94 (MQ=60)
TTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTAGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCACGTCAGGAAGGCGTTAAGCG < SRR4302547.6608108/94‑1 (MQ=60)
ATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGAACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCG > SRR4302547.6693984/1‑94 (MQ=60)
TGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGT > SRR4302547.4015139/1‑94 (MQ=60)
TGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGT > SRR4302547.3473711/1‑94 (MQ=60)
GGCCGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTG > SRR4302547.3820927/1‑94 (MQ=60)
GCCGTTCATCCCGACGTGCAGGACAAAGGGTTAGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTGA > SRR4302547.2271053/1‑94 (MQ=60)
CCGTTCATCCCGACGTGCAGGACAAAGGGATGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTGAC > SRR4302547.3185667/1‑94 (MQ=60)
CGTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTGACC < SRR4302547.4658357/94‑1 (MQ=60)
CGTTCATCCCGACGTGCAGGACAAAGGGTTAGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTGACC < SRR4302547.1370781/94‑1 (MQ=60)
GTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTGACCT < SRR4302547.3943405/94‑1 (MQ=60)
GTTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTGACCT < SRR4302547.711227/94‑1 (MQ=60)
TTCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTGACCTG > SRR4302547.3228257/1‑94 (MQ=60)
TTCATCCCGACGTGCAGGACAAAGGGTTAGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGggggcagggaggcggtaagggggggacctgg > SRR4302547.1517371/1‑63 (MQ=60)
TCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTGACCTGT > SRR4302547.3818628/1‑94 (MQ=60)
TCATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTGACCTGT > SRR4302547.4264689/1‑94 (MQ=60)
TCATCCCGACGTGCAGGACAAAGGGTTAGGCACGCTGATGGCGATGACCCTGGAGTTGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTGACCTGT < SRR4302547.233761/94‑1 (MQ=60)
ATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTGACCTGTAG > SRR4302547.3031261/1‑94 (MQ=60)
ATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTGACCTGTAG < SRR4302547.2876895/94‑1 (MQ=60)
ATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTGACCTGTAG < SRR4302547.4812540/94‑1 (MQ=60)
ATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTGACCTGTAG > SRR4302547.4437255/1‑94 (MQ=60)
ATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTGACCTGTAG < SRR4302547.1311724/94‑1 (MQ=60)
ATCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTGACCTGTAG < SRR4302547.5324369/94‑1 (MQ=60)
TCCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTGACCTGTAGC < SRR4302547.2775895/94‑1 (MQ=60)
CCCGACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTGACCTGTAGCG < SRR4302547.4898852/94‑1 (MQ=60)
GACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTGACCTGTAGCGCCC < SRR4302547.1081528/94‑1 (MQ=60)
GACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTGACCTGTAGCGCCC > SRR4302547.3640789/1‑94 (MQ=60)
GACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTGACCTGTAGCGCCC > SRR4302547.5508080/1‑94 (MQ=60)
ACGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTGACCTGTAGCGGCCG > SRR4302547.2876982/1‑94 (MQ=60)
ACGTGCAGGACAAAGGGTTAGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTGACCTGTAGCGCCCG > SRR4302547.1972552/1‑94 (MQ=60)
CGTGCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTGACCTGTAGCGCCCGT < SRR4302547.3789648/94‑1 (MQ=60)
GTGCAGGACAAAGGGTTAGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTGACCTGTAGCGCCCGTG > SRR4302547.4473658/1‑94 (MQ=60)
tgtaaGACAAAGGGTTGCGCACGCTGATGGCGATGTCCCTGGAGTCGGTTGCGCGTCAGGAAGGCGTTAAGCGCGTGACCTGTAGCGCCCGTGA < SRR4302547.5346822/89‑1 (MQ=60)
GCAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTGACCTGTAGCGCCCGTGAA < SRR4302547.5543447/94‑1 (MQ=60)
CAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTGACCTGTAGCGCCCGTGAAG < SRR4302547.5093506/94‑1 (MQ=60)
CAGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTGACCTGTAGCGCCCGTGAAG < SRR4302547.3261409/94‑1 (MQ=60)
AGGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTGACCTGTAGCGCCCGTGAAGA > SRR4302547.1877589/1‑94 (MQ=60)
AGGACAAAGGGTTAGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTGACCTGTAGCGCCCGTGAAGA > SRR4302547.6250157/1‑94 (MQ=60)
GGACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTGACCTGTAGCGCCCGTGAAGAC < SRR4302547.1045876/94‑1 (MQ=60)
GGACAAAGGGTTAGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTGACCTGTAGCGCCCGTGAAGAC < SRR4302547.5883999/94‑1 (MQ=60)
GGACAAAGGGTTAGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTGACCTGTAGCGCCCGTGAAGAC < SRR4302547.2561482/94‑1 (MQ=60)
GACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTGACCTGTAGCGCCCGTGAAGACG < SRR4302547.1401992/94‑1 (MQ=60)
ACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTGACCTGTAGCGCCCGTGAAGACGC > SRR4302547.5188188/1‑94 (MQ=60)
ACAAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTGACCTGTAGCGCCCGTGAAGACGC < SRR4302547.1846431/94‑1 (MQ=60)
ACAAAGGGTTAGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTGACCTGTAGCGCCCGTGAAGACGC > SRR4302547.3446512/1‑94 (MQ=60)
ACAAAGGGTAGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTGACCTGTAGCGCCCGTGAAGACGC > SRR4302547.6605388/1‑94 (MQ=60)
CAAAGGGTTAGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTGACCTGTAGCGCCCGTGAAGACGCG > SRR4302547.956864/1‑94 (MQ=60)
AAAGGGTTGGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTGACCTGTAGCGCCCGTGAAGACGCGG < SRR4302547.3587185/94‑1 (MQ=60)
GTTGGGCACGCTGATGGCGATGACGCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTGACCTGTAGCGCCCGTGAAGACGCGGTGGAG < SRR4302547.6656502/94‑1 (MQ=60)
GTTAGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTGACCTGTAGCGCCCGTGAAGACGCGGTGGAG < SRR4302547.803058/94‑1 (MQ=60)
TTGGGCACGCTGAGGGCGATGCCCGTGGAGTCGGTGGCGTGGCAGGAAGTCGTTAAGCGCGTGACCTGTGGCGCTCGTGAAGACGCGGTGGGGT < SRR4302547.2779588/94‑1 (MQ=50)
GGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTGACCTGTAGCGCCCGTGAAGACGCGGTGGAGTTT > SRR4302547.3498351/1‑94 (MQ=60)
GGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTGACCTGTAGCGCCCGTGAAGACGCGGTGGAGTTT > SRR4302547.2271462/1‑94 (MQ=60)
|
TCTGGTGGCGGTAGGCCGACTGTATATTAATGCCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTAGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTGACCTGTAGCGCCCGTGAAGACGCGGTGGAGTTT > NC_000913/4075238‑4075424
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
