Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
593 |
264.2 |
13311096 |
97.8% |
13018251 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,133,368 |
G→T |
E652* (GAG→TAG) |
katG → |
catalase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,133,368 | 0 | G | T | 100.0%
| 1102.1
/ NA
| 282 | E652* (GAG→TAG) | katG | catalase |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (154/128); total (154/128) |
Only 100 of 289 total aligned reads displayed.
AACTTCGATGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACGAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTACGGCCAGCCGTGCGGAT > NC_000913/4133278‑4133457
|
aaCTTCGATGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAg > 1:4430554/1‑93 (MQ=255)
aaCTTCGATGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAg < 1:310649/93‑1 (MQ=255)
aCTTCGATGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGt < 2:4450463/93‑1 (MQ=255)
cTTCGATGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTg < 1:3510163/93‑1 (MQ=255)
ttCGATGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTgg > 2:836713/1‑93 (MQ=255)
ttCGATGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTgg < 2:1124226/93‑1 (MQ=255)
tCGATGGCGGCAAAACCGGAGTCTTCACTGACCGCGTTGGCGGATTAAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGa < 1:2394709/93‑1 (MQ=255)
cGATGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGaa < 1:3406000/93‑1 (MQ=255)
gATGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCCATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGaaa > 1:3963566/1‑93 (MQ=255)
gATGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGaaa < 2:2678725/93‑1 (MQ=255)
gATGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGaaa < 1:188199/93‑1 (MQ=255)
aTGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAg > 1:4745429/1‑93 (MQ=255)
aTGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAg > 2:4795582/1‑93 (MQ=255)
tGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGc < 1:5943170/93‑1 (MQ=255)
ggCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGcg > 1:1015986/1‑93 (MQ=255)
cagcaAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGcgac < 2:1268515/93‑1 (MQ=255)
agcaAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGcgaca < 2:2550427/93‑2 (MQ=255)
gcaAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGcgaccg > 2:5258160/1‑93 (MQ=255)
caAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGcgaccga < 1:2555138/93‑1 (MQ=255)
aaaaaCGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGcgaccgac < 1:2825456/93‑1 (MQ=255)
aaaaaCGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGcgaccgac > 2:143759/1‑93 (MQ=255)
aaaaCGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACcgacg < 2:292128/93‑1 (MQ=255)
aaaaCGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACcgacg > 2:5586382/1‑93 (MQ=255)
aCGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAAt < 1:3691367/93‑1 (MQ=255)
aCGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAAt < 1:6586246/93‑1 (MQ=255)
aCGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAAt < 2:5395624/93‑1 (MQ=255)
cGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATc < 1:228031/93‑1 (MQ=255)
ggCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCg > 1:6490452/1‑93 (MQ=255)
ggCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCg > 2:3294358/1‑93 (MQ=255)
ggCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCg > 2:1576053/1‑93 (MQ=255)
cGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGaa > 1:1281786/1‑93 (MQ=255)
gTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGaaa > 1:4780218/1‑93 (MQ=255)
tCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAag < 2:4298959/93‑1 (MQ=255)
tCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAag > 2:5734854/1‑93 (MQ=255)
tCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAag > 1:3854326/1‑93 (MQ=255)
cTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAaga < 1:1431452/93‑1 (MQ=255)
ttCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAagag > 1:5485122/1‑93 (MQ=255)
ttCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAagag > 1:6354564/1‑93 (MQ=255)
tCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGc < 1:3780200/93‑1 (MQ=255)
cACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCt < 1:2699487/93‑1 (MQ=255)
cACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCt > 1:4606693/1‑93 (MQ=255)
tGACCGCGTTGGCGTATTGAGCAATGCCTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGtt < 2:1776519/93‑1 (MQ=255)
tGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGtt < 2:3595462/93‑1 (MQ=255)
gACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTc < 2:5057388/93‑1 (MQ=255)
gACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTc > 1:355253/1‑93 (MQ=255)
ccGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGa > 1:936561/1‑93 (MQ=255)
ccGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGa < 2:1867722/93‑1 (MQ=255)
cgcgTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGaa < 2:5663293/93‑1 (MQ=255)
gcgTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAg > 1:5414871/1‑93 (MQ=255)
cgTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGCAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAgg < 1:3264919/93‑1 (MQ=255)
gTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGc < 1:6072385/93‑1 (MQ=255)
gTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGc > 1:5097006/1‑93 (MQ=255)
ttGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAggac > 1:6622117/1‑91 (MQ=255)
ggCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGccgt > 1:6125325/1‑93 (MQ=255)
gCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGccgtg > 2:1947766/1‑93 (MQ=255)
cGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGccgtga > 2:513875/1‑93 (MQ=255)
gTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGccgtgac < 2:6563185/93‑1 (MQ=255)
gTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGccgtgac < 1:5858532/93‑1 (MQ=255)
gTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGccgtgac < 2:280230/93‑1 (MQ=255)
tATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGccgtgacc < 2:5944307/93‑1 (MQ=255)
tATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGccgtgacc > 2:2361470/1‑93 (MQ=255)
aTTGAGCAATTACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGccgtgaccg > 2:5788889/1‑93 (MQ=255)
aTTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGccgtgaccg < 2:5484314/93‑1 (MQ=255)
tGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGccgtgaccgta > 1:4889956/1‑92 (MQ=255)
gAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGccgtgaccgtga > 2:958050/1‑93 (MQ=255)
gAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGccgtgaccgtga < 2:3088479/93‑1 (MQ=255)
gCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGaaa > 2:180355/1‑93 (MQ=255)
cAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAAc < 1:2317536/93‑1 (MQ=255)
cAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAAc > 1:2164870/1‑93 (MQ=255)
aaTGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAAcc < 2:3666310/93‑1 (MQ=255)
aaTGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAAcc > 2:4201662/1‑93 (MQ=255)
aCTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCg > 2:2183705/1‑93 (MQ=255)
tcttcGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAg > 2:1573348/1‑93 (MQ=255)
tcttcGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAg > 2:1056394/1‑93 (MQ=255)
cttcGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGt < 1:4936482/93‑1 (MQ=255)
cttcGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGt < 2:4077324/93‑1 (MQ=255)
ttcGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTg > 2:873270/1‑93 (MQ=255)
cGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGaa > 2:4948340/1‑93 (MQ=255)
cGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGaa > 1:4253780/1‑93 (MQ=255)
gTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGaaa > 2:3728465/1‑93 (MQ=255)
aaCTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAAttt > 1:1700703/1‑93 (MQ=255)
aaCTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAAttt > 1:527220/1‑93 (MQ=255)
aaCTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAAttt > 2:582432/1‑93 (MQ=255)
aCTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTa < 1:6409086/93‑1 (MQ=255)
aCTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTa > 1:3243728/1‑93 (MQ=255)
cTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTAc > 1:1084323/1‑93 (MQ=255)
ttGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTACg > 2:6344291/1‑93 (MQ=255)
ttGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTACg < 1:3004080/93‑1 (MQ=255)
gCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTACGGc < 2:4173433/93‑1 (MQ=255)
cTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTACGGcc < 2:3972874/93‑1 (MQ=255)
tGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTACGGCCa > 2:3159675/1‑93 (MQ=255)
tGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTACGGCCa > 1:3051340/1‑93 (MQ=255)
tGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTACGGCCa > 2:458282/1‑93 (MQ=255)
tGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTACGGCCa > 2:3474818/1‑93 (MQ=255)
ggATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTACGGCCAg > 1:5581284/1‑93 (MQ=255)
ggATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTACGGCCAg > 1:2029414/1‑93 (MQ=255)
atGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTACGGCCAGCCGt > 2:6638598/1‑93 (MQ=255)
ttACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTACGGCCAGCCGTGCGGa > 2:5194226/1‑93 (MQ=255)
ttACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTACGGCCAGCCGTGCGGa < 2:2410534/93‑1 (MQ=255)
tACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTACGGCCAGCCGTGCGGAt < 2:615612/93‑1 (MQ=255)
|
AACTTCGATGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACGAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTACGGCCAGCCGTGCGGAT > NC_000913/4133278‑4133457
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GCCAACTTCGATGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACGAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTACGGCCAGCCGTGCGGATCTGG > NC_000913/4133275‑4133461
|
GCCAACTTCGATGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACT > SRR4302547.5873047/1‑94 (MQ=60)
CCAACTTCGATGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTA > SRR4302547.1285275/1‑94 (MQ=60)
CCAACTTCGATGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTAAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTA < SRR4302547.1310318/94‑1 (MQ=60)
CAACTTCGATGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAG > SRR4302547.4522124/1‑94 (MQ=60)
AACTTCGATGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGT < SRR4302547.316432/94‑1 (MQ=60)
AACTTCGATGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGT > SRR4302547.3565565/1‑94 (MQ=60)
AACTTCGATGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGGTACTAGT > SRR4302547.3184612/1‑94 (MQ=60)
ACTTCGATGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTG > SRR4302547.2421081/1‑94 (MQ=60)
CTTCGATGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGG > SRR4302547.2864769/1‑94 (MQ=60)
CTTCGATGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGG > SRR4302547.567744/1‑94 (MQ=60)
CTTCGATGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGG < SRR4302547.3581801/94‑1 (MQ=60)
TTCGATGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGA < SRR4302547.3321002/94‑1 (MQ=60)
TTCGATGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGA > SRR4302547.6377037/1‑94 (MQ=60)
TCGATGGCGGCAAAACCGGAGTCTTCACTGACCGCGTTGGCGGATTAAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAA < SRR4302547.2443215/94‑1 (MQ=60)
TCGATGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAA < SRR4302547.618983/94‑1 (MQ=60)
TCGATGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAA > SRR4302547.6563821/1‑94 (MQ=60)
TCGATGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAA < SRR4302547.3954044/94‑1 (MQ=60)
CGATGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCCATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAA > SRR4302547.4044187/1‑94 (MQ=60)
CGATGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAA < SRR4302547.3475300/94‑1 (MQ=60)
GATGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAG < SRR4302547.191747/94‑1 (MQ=60)
GATGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAG > SRR4302547.4843771/1‑94 (MQ=60)
ATGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGC > SRR4302547.6522445/1‑94 (MQ=60)
TGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCG < SRR4302547.6095619/94‑1 (MQ=60)
TGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCG < SRR4302547.6066406/94‑1 (MQ=60)
TGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCG > SRR4302547.1035882/1‑94 (MQ=60)
GGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGA < SRR4302547.3931803/94‑1 (MQ=60)
CAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGAC > SRR4302547.5442469/1‑94 (MQ=60)
CAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGAC < SRR4302547.3818736/94‑1 (MQ=60)
CAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGAC < SRR4302547.2606739/94‑1 (MQ=60)
AAAATCGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACA < SRR4302547.3109360/94‑1 (MQ=60)
AAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACG < SRR4302547.2881967/94‑1 (MQ=60)
AAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGA < SRR4302547.5000026/94‑1 (MQ=60)
AAAACGGCGTATTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGA > SRR4302547.3658466/1‑94 (MQ=60)
AAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAA < SRR4302547.532380/94‑1 (MQ=60)
ACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATC < SRR4302547.3766724/94‑1 (MQ=60)
ACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATC < SRR4302547.6723373/94‑1 (MQ=60)
ACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATC < SRR4302547.6680140/94‑1 (MQ=60)
CGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCG < SRR4302547.232307/94‑1 (MQ=60)
CGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCG > SRR4302547.6625574/1‑94 (MQ=60)
GGCGTCTTCACTGACCACGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGA > SRR4302547.4280608/1‑94 (MQ=60)
GCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAA > SRR4302547.1307615/1‑94 (MQ=60)
CGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAA < SRR4302547.5164492/94‑1 (MQ=60)
CGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAA > SRR4302547.4879230/1‑94 (MQ=60)
CGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAA > SRR4302547.6364026/1‑94 (MQ=60)
GTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAG > SRR4302547.1150416/1‑94 (MQ=60)
GTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAG > SRR4302547.3932781/1‑94 (MQ=60)
GTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAG > SRR4302547.2059972/1‑94 (MQ=60)
TCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGA > SRR4302547.5285674/1‑94 (MQ=60)
CTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAG > SRR4302547.6487022/1‑94 (MQ=60)
CTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAG < SRR4302547.723602/94‑1 (MQ=60)
CTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAG < SRR4302547.1332405/94‑1 (MQ=60)
CTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAG < SRR4302547.1460076/94‑1 (MQ=60)
CTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAG > SRR4302547.2339136/1‑94 (MQ=60)
CTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAG < SRR4302547.5579843/94‑1 (MQ=60)
CTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAG > SRR4302547.5598392/1‑94 (MQ=60)
CTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAG > SRR4302547.4848742/1‑94 (MQ=60)
TCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCT > SRR4302547.4702025/1‑94 (MQ=60)
TCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCT > SRR4302547.5090616/1‑94 (MQ=60)
TCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCT < SRR4302547.3857284/94‑1 (MQ=60)
TCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCT < SRR4302547.6654028/94‑1 (MQ=60)
CACTGACCGCGTTTGCGTATTGAGCAATGCCTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAACGCGACCGACGAATCGAAAGAGCTG < SRR4302547.2512477/94‑1 (MQ=60)
CACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTG < SRR4302547.2753673/94‑1 (MQ=60)
CACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTG > SRR4302547.2893418/1‑94 (MQ=60)
CTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTT > SRR4302547.3161520/1‑94 (MQ=60)
CTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTAATAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTT < SRR4302547.4743640/94‑1 (MQ=60)
TGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTC > SRR4302547.361845/1‑94 (MQ=60)
TGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTC < SRR4302547.4955432/94‑1 (MQ=60)
GACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCG < SRR4302547.2006084/94‑1 (MQ=60)
GACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCG < SRR4302547.5899520/94‑1 (MQ=60)
ACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGA > SRR4302547.6186857/1‑94 (MQ=60)
ACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGA > SRR4302547.954690/1‑94 (MQ=60)
ttccgatcttgacattAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAA > SRR4302547.3295827/17‑94 (MQ=60)
CGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAG < SRR4302547.3816478/94‑1 (MQ=60)
CGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAG < SRR4302547.3955392/94‑1 (MQ=60)
CGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAG > SRR4302547.552665/1‑94 (MQ=60)
CGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAG > SRR4302547.5526880/1‑94 (MQ=60)
GCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGG < SRR4302547.2663626/94‑1 (MQ=60)
GCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGG > SRR4302547.1358694/1‑94 (MQ=60)
CGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGC < SRR4302547.3589640/94‑1 (MQ=60)
CGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGC > SRR4302547.5202098/1‑94 (MQ=60)
CGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGCAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGC < SRR4302547.3330235/94‑1 (MQ=60)
GTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCC < SRR4302547.6198348/94‑1 (MQ=60)
GTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGAC > SRR4302547.6759959/1‑94 (MQ=60)
TTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCG < SRR4302547.4773447/94‑1 (MQ=60)
TTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCG > SRR4302547.2120769/1‑94 (MQ=60)
TGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGT > SRR4302547.6252393/1‑94 (MQ=60)
GGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTG < SRR4302547.151015/94‑1 (MQ=60)
GCGTATTGAGCAATAACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGA > SRR4302547.601814/1‑94 (MQ=60)
GTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACC > SRR4302547.4605134/1‑94 (MQ=60)
GTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACC > SRR4302547.3471550/1‑94 (MQ=60)
GTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACC < SRR4302547.5979768/94‑1 (MQ=60)
GTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACC > SRR4302547.1785181/1‑94 (MQ=60)
CTATTGAGTAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACAAATCGAAAGAGCTGTTCGAAGGCCGTGACC < SRR4302547.4517645/94‑1 (MQ=60)
TATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCG < SRR4302547.2785078/94‑1 (MQ=60)
TTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTG < SRR4302547.2343991/94‑1 (MQ=60)
TTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTA > SRR4302547.4991233/1‑94 (MQ=60)
AGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAA < SRR4302547.2999907/94‑1 (MQ=60)
GCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAAC > SRR4302547.2208163/1‑94 (MQ=60)
CAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACC < SRR4302547.2364515/94‑1 (MQ=60)
AGTGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCG > SRR4302547.6516346/1‑94 (MQ=60)
AATGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCG < SRR4302547.1765148/94‑1 (MQ=60)
TGACTTCTTCGTGAACTTGCTGGATATGCGTTGCTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGC > SRR4302547.5416009/1‑94 (MQ=60)
TGACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGC > SRR4302547.2177257/1‑94 (MQ=60)
ACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGA < SRR4302547.220955/94‑1 (MQ=60)
ACTTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGA > SRR4302547.4167529/1‑94 (MQ=60)
TTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGACGGCCGTGACCGTGCAACCGGGGAAG > SRR4302547.358602/1‑94 (MQ=60)
TTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAG > SRR4302547.2218627/1‑94 (MQ=60)
TTCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAG < SRR4302547.5902753/94‑1 (MQ=60)
TCTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGT < SRR4302547.1045382/94‑1 (MQ=60)
CTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTG < SRR4302547.5038740/94‑1 (MQ=60)
CTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTG < SRR4302547.2640918/94‑1 (MQ=60)
CTTCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTG > SRR4302547.3200914/1‑94 (MQ=60)
TCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAA < SRR4302547.4865458/94‑1 (MQ=60)
TCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAA < SRR4302547.2539090/94‑1 (MQ=60)
TCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAA > SRR4302547.6234503/1‑94 (MQ=60)
TCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAA > SRR4302547.4340821/1‑94 (MQ=60)
TCGTGAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAA < SRR4302547.6013787/94‑1 (MQ=60)
GAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTT > SRR4302547.975051/1‑94 (MQ=60)
GAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTT > SRR4302547.1734123/1‑94 (MQ=60)
GAACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTT > SRR4302547.536753/1‑94 (MQ=60)
AACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTA > SRR4302547.3308506/1‑94 (MQ=60)
ACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTAC > SRR4302547.1105986/1‑94 (MQ=60)
ACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTAC < SRR4302547.6542744/94‑1 (MQ=60)
ACTTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTAC > SRR4302547.3163888/1‑94 (MQ=60)
TTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTACGG < SRR4302547.3761154/94‑1 (MQ=60)
TTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTACGG < SRR4302547.3063838/94‑1 (MQ=60)
TTGCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTACGG < SRR4302547.5006896/94‑1 (MQ=60)
GCTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTACGGCC > SRR4302547.4949571/1‑94 (MQ=60)
CTGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTACGGCCA > SRR4302547.3112054/1‑94 (MQ=60)
TGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTACGGCCAG > SRR4302547.5696409/1‑94 (MQ=60)
TGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTACGGCCAG < SRR4302547.1261834/94‑1 (MQ=60)
TGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTACGGCCAG > SRR4302547.2069827/1‑94 (MQ=60)
TGGATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTACGGCCAG < SRR4302547.3069130/94‑1 (MQ=60)
GATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTACGGCCAGCC < SRR4302547.440777/94‑1 (MQ=60)
ATATGCGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTACGGCCAGCCG > SRR4302547.3312376/1‑94 (MQ=60)
CGTTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTACGGCCAGCCGTGCGG > SRR4302547.6733650/1‑94 (MQ=60)
CGTTACTAGGGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAGGGCCGTGACCGTGAAACCAGCGAAGTGAAAATTACGGCCAGCCGTGCCG > SRR4302547.3569568/1‑94 (MQ=60)
TTACTAGTGGAAAGCGACCGACGAATGGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTACGGCCAGCCGTGCGGAT < SRR4302547.3884863/94‑1 (MQ=60)
TTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTACGGCCAGCCGTGCGGAT < SRR4302547.150495/94‑1 (MQ=60)
TTACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTACGGCCAGCCGTGCGGAT < SRR4302547.915409/94‑1 (MQ=60)
TACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTACGGCCAGCCGTGCGGATC > SRR4302547.4061474/1‑94 (MQ=60)
TACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATCTACGGCCAGCCGTGCGGATC < SRR4302547.6551264/94‑1 (MQ=60)
ACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTACGGCCAGCCGTGCGGATCT < SRR4302547.214250/94‑1 (MQ=60)
ACTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTACGGCCAGCCGTGCGGATCT > SRR4302547.4741924/1‑94 (MQ=60)
CTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTACGGCCAGCCGTGCGGATCTG > SRR4302547.1530477/1‑94 (MQ=60)
CTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTACGGCCAGCCGTGCGGATCTG > SRR4302547.4032210/1‑94 (MQ=60)
CTAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTACGGCCAGCCGTGCGGATCTG > SRR4302547.3989356/1‑94 (MQ=60)
TAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTACGGCCAGCCGTGCGGATCTGG > SRR4302547.4639253/1‑94 (MQ=60)
TAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTACGGCCAGCCGTGCGGATCTGG < SRR4302547.6597368/94‑1 (MQ=60)
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GCCAACTTCGATGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACGAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTACGGCCAGCCGTGCGGATCTGG > NC_000913/4133275‑4133461
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
