Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
593 |
264.2 |
13311096 |
97.8% |
13018251 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,194,729 |
A→G |
G83G (GGA→GGG) |
yjaD → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,194,729 | 0 | A | G | 86.5%
| 481.4
/ 61.7
| 185 | G83G (GGA→GGG) | yjaD | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (16/9); new base G (90/70); total (106/79) |
| Fisher's exact test for biased strand distribution p-value = 5.20e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.21e-01 |
Only 100 of 192 total aligned reads displayed.
TGTTTGGTTAGTACAACAGCAGCGGCGTCACGATATGGGGTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGACGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGCATGAAATGTATCCGAGCAAAACCGAATGGGCGAT > NC_000913/4194639‑4194821
|
tGTTTGGTTAGTACAACAGCAGCGGCGTCACGATATGGGGTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCg < 1:4303625/93‑1 (MQ=255)
tGTTTGGTTAGTACAACAGCAGCGGCGTCACGATATGGGGTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGACg > 2:5726609/1‑93 (MQ=255)
tGTTTGGTTAGTACAACAGCAGCGGCGTCACGATATGGGGTCGGTACGTCAGGTCATTGATCTCGAGGTTGGGCTGTTTCAACTGGACGGGCg > 1:1034535/1‑93 (MQ=255)
tttGGTTAGTACAACAGCAGCGGCGTCACGATATGGGGTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAg < 2:4492921/93‑1 (MQ=255)
ttGGTTAGTACAACAGCAGCGGCGTCACGATATGGGGTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAgg < 1:5190126/93‑1 (MQ=255)
tGGTTAGTACAACAGCAGCGGCGTCACGATATGGGGTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGc < 2:573986/93‑1 (MQ=255)
tGGTTAGTACAACAGCAGCGGCGTCACGATATGGGGTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGc > 2:2011511/1‑93 (MQ=255)
ggTTAGTACAACAGCAGCGGCGTCACGATATGGGGTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCg > 1:4644250/1‑93 (MQ=255)
ttAGTACAACAGCAGCGGCGTCACGATATGGGGTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTa < 1:3082172/93‑1 (MQ=255)
tAGTACAACAGCAGCGGCGTCACGATATGGGGTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTAc < 1:476643/93‑1 (MQ=255)
aGTACAACAGCAGCGGCGTCACGATATGGGGTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACa > 2:5213287/1‑93 (MQ=255)
gTACAACAGCAGCGGCGTCACGATATGGTGTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACaa < 1:6564776/93‑1 (MQ=255)
acaacaGCAGCGGCGTCACGATATGGGGTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACt < 2:2895676/93‑1 (MQ=255)
acaacaGCAGCGGCGTCACGATATGGGGTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACt < 2:1657026/93‑1 (MQ=255)
acaacaGCAGCGGCGTCACGATATGGGGTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGACGAGGCGTACAACt < 1:5447445/93‑1 (MQ=255)
caacaGCAGCGGCGTCACGATATGGGGTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTg < 2:3424739/93‑1 (MQ=255)
acaGCAGCGGCGTCACGATATGGGGTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGc < 1:2121080/93‑1 (MQ=255)
cagcagCGGCGTCACGATATGGGGTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCg > 2:2870591/1‑93 (MQ=255)
cagcagCGGCGTCACGATATGGGGTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCg > 2:2967781/1‑93 (MQ=255)
gcagcGGCGTCACGATATGGGGTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGa > 2:802218/1‑93 (MQ=255)
gcagcGGCGTCACGATATGGGGTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGa > 2:6077433/1‑93 (MQ=255)
cagcGGCGTCACGATATGGGGTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGACGAGGCGTACAACTGGCGGAg < 1:99798/93‑1 (MQ=255)
gcggcgTCACGATATGGGGTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAggt > 1:5043839/1‑91 (MQ=255)
gcggcgTCACGATATGGGGTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGtt < 1:1247168/93‑1 (MQ=255)
gcggcgTCACGATATGGGGTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGACGAGGCGTACAACTGGCGGAGtt > 2:6343877/1‑93 (MQ=255)
gggcgTCACGATATGGGGTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGttt < 2:5669000/92‑1 (MQ=255)
ggcgTCACGATATGGGGTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGACGAGGCGTACAACTGGCGGAGtttt > 2:3101389/1‑93 (MQ=255)
gcgTCACGATATGGGGTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGACGAGGCGTACAACTGGCGGAGTTTTa > 1:1560333/1‑93 (MQ=255)
gTCACGATATGGGGTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTAcc > 2:3606961/1‑93 (MQ=255)
gTCACGATATGGGGTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTAcc < 2:6262647/93‑1 (MQ=255)
gTCACGATATGGGGTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTAcc > 2:194704/1‑93 (MQ=255)
gTCACGATATGGGGTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGGTTTAcc > 2:4616572/1‑93 (MQ=255)
gTCACGATATGGGGTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGCTTTAcc > 1:2333660/1‑93 (MQ=255)
tCACGATATGGGGTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCg > 2:3513645/1‑93 (MQ=255)
tCACGATATGGGGTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCg > 1:4507650/1‑93 (MQ=255)
cACGATATGGGGTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGACGAGGCGTACACCTGGCGGAGTTTTCCCGa > 1:3339119/1‑93 (MQ=255)
gATATGGGGTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCg > 2:4791843/1‑93 (MQ=255)
tatGGGGTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCa < 2:2505730/93‑1 (MQ=255)
atGGGGTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCAt > 1:3288273/1‑93 (MQ=255)
atGGGGTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCAt > 1:4336579/1‑93 (MQ=255)
tGGGGTCGGTACGTCAGGTCATTGATCTCGATGTTGGCCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATa < 2:6511587/93‑1 (MQ=255)
ggggTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGGTTTACCGATCGCAtca > 1:5137278/1‑91 (MQ=255)
gggTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATaaa < 1:6066076/93‑1 (MQ=255)
ggTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAAt > 2:5938462/1‑93 (MQ=255)
ggTCAGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAAt < 1:2685718/93‑1 (MQ=255)
gTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATa < 1:6409500/93‑1 (MQ=255)
gTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGACGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATa > 2:1904901/1‑93 (MQ=255)
tCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATAc < 1:136954/93‑1 (MQ=255)
gTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGACGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACtgt > 2:2367198/1‑93 (MQ=255)
tACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACtgtg > 1:1011008/1‑93 (MQ=255)
tACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGACGAGGGGCAAAACTGGCGGCGGGTTACCGATTGCGTCAATACtgtg > 1:716107/1‑93 (MQ=255)
aCGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTgg < 2:659402/93‑1 (MQ=255)
gTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGtt > 2:320219/1‑93 (MQ=255)
cAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTAc > 2:3416087/1‑93 (MQ=255)
aGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACt > 1:2854931/1‑93 (MQ=255)
ggTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTg > 2:4537920/1‑93 (MQ=255)
ggTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGACGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTg > 2:4430083/1‑93 (MQ=255)
gTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGc > 1:6272609/1‑93 (MQ=255)
gTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGc < 1:5601295/93‑1 (MQ=255)
gTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGACGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGc < 1:2333732/93‑1 (MQ=255)
cATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCgg < 2:5036988/93‑1 (MQ=255)
aTTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCggg > 2:600872/1‑93 (MQ=255)
ttGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGc > 2:5382171/1‑93 (MQ=255)
ttGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGc > 2:1463544/1‑93 (MQ=255)
tctcGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGCATGa > 2:1025062/1‑93 (MQ=255)
tctcGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGCATGa > 1:1461320/1‑93 (MQ=255)
tcGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGCATGaaa > 1:2465648/1‑93 (MQ=255)
tcGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGCATGaaa < 2:6222575/93‑1 (MQ=255)
tcGATGTTGGGCTGTTTCAACTGGCCGGACGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGCATGaaa < 2:5751480/93‑1 (MQ=255)
gATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGCATGAAATg > 1:4292990/1‑93 (MQ=255)
gATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGCATGAAATg > 1:5719822/1‑93 (MQ=255)
aTGTTGGGCTGTCTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGCATGAAATGt < 1:1843994/93‑1 (MQ=255)
gTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGCATGAAATGTAt < 1:5613213/93‑1 (MQ=255)
gTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGCATGAAATGTAt < 2:4485622/93‑1 (MQ=255)
ttGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGCATGAAATGTATc < 1:5248718/93‑1 (MQ=255)
tGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGCATGAAATGTATcc < 1:2068159/93‑1 (MQ=255)
ggCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGCATGAAATGTATCCGa < 1:1988348/93‑1 (MQ=255)
gCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGCATGAAATGTATCCGAg > 2:5176497/1‑93 (MQ=255)
tGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGCATGAAATGTATCCGAGCa > 1:1343509/1‑93 (MQ=255)
tGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGCATGAAATGTATCCGAGCa < 1:3884503/93‑1 (MQ=255)
tGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGCATGAAATGTATCCGAGCa > 2:4099481/1‑93 (MQ=255)
tGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGCATGAAATGTATCCGAGCa > 1:4021354/1‑93 (MQ=255)
tGTTTCAACTGGCCGGACGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGCATGAAATGTATCCGAGCa > 2:3855067/1‑93 (MQ=255)
gTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGCATGAAATGTATCCGAGCaa < 1:1901425/93‑1 (MQ=255)
tttCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGCATGAAATGTATCCGAGCaaa < 2:4711960/93‑1 (MQ=255)
tctCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGCATGAAATGTATCCGAGCaaa > 1:4248220/3‑93 (MQ=255)
ttCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGCATGAAATGTATCCGAGCaaaa > 2:5168897/1‑93 (MQ=255)
cAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGCATGAAATGTATCCGAGCAAAAcc < 1:6426978/93‑1 (MQ=255)
cAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGCATGAAATGTATCCGAGCAAAAcc > 1:5774215/1‑93 (MQ=255)
aCTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGCATGAAATGTATCCGAGCAAAACCGa > 2:21607/1‑93 (MQ=255)
cTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGCATGAAATGTATCCGAGCAAAACCGaa > 2:5875843/1‑93 (MQ=255)
tGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGCATGAAATGTATCCGAGCAAAACCGAAt < 1:4359862/93‑1 (MQ=255)
gaccGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGCATGAAATGTATCCGAGCAAAACCGAATg < 1:2393019/91‑1 (MQ=255)
gCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGCATGAAATGTATCCGAGCAAAACCGAATgg < 2:1569450/93‑1 (MQ=255)
gCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGCATGAAATGTATCCGAGCAAAACCGAATgg > 1:5870914/1‑93 (MQ=255)
gCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGCATGAAATGTATCCGAGCAAAACCGAATgg < 1:4432772/93‑1 (MQ=255)
ccGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGCATGAAATGTATCCGAGCAAAACCGAATggg > 2:365321/1‑93 (MQ=255)
ccGGGCGAGGCGTACAACTAGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGCATGAAATGTATCCGAGCAAAACCGAATggg > 1:6495578/1‑93 (MQ=255)
cGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGCATGAAATGTATCCGAGCAAAACCGAATGGGc > 2:2408631/1‑93 (MQ=255)
gACGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGCATGAAATGTATCCGAGCAAAACCGAATGGGCGa > 1:2980885/1‑93 (MQ=255)
|
TGTTTGGTTAGTACAACAGCAGCGGCGTCACGATATGGGGTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGACGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGCATGAAATGTATCCGAGCAAAACCGAATGGGCGAT > NC_000913/4194639‑4194821
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CTGTTTGGTTAGTACAACAGCAGCGGCGTCACGATATGGGGTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGACGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGCATGAAATGTATCCGAGCAAAACCGAATGGGCGAT > NC_000913/4194638‑4194821
|
CTGTTTGGTTAGTACAACAGCAGCGGCGTCACGATATGGGGTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCG > SRR4302547.2892025/1‑94 (MQ=60)
CTGTTTGGTTAGTACAACAGCAGCGGCGTCACGATATGGGGTCGGTACGTCAGGTCATTGATCTCGAGGTTGGGCTGTTTCAACTGGACGGGCG > SRR4302547.1054893/1‑94 (MQ=60)
TGTTTGGTTAGTACAACAGCAGCGGCGTCACGATATGGGGTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGA < SRR4302547.4392144/94‑1 (MQ=60)
TTGGTTAGTACAACAGCAGCGGCGTCACGATATGGGGTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGC < SRR4302547.5296940/94‑1 (MQ=60)
TGGTTAGTACAACAGCAGCGGCGTCACGATATGGGGTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCG > SRR4302547.4740436/1‑94 (MQ=60)
TGGTTAGTACAACAGCAGCGGCGTCACGATATGGGGTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGACGAGGCG < SRR4302547.4750198/94‑1 (MQ=60)
GGTTAGTACAACAGCAGCGGCGTCACGATATGGGGTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGT < SRR4302547.4396661/94‑1 (MQ=60)
GTTAGTACAACAGCAGCGGCGTCACGATATGGGGTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTA > SRR4302547.2227493/1‑94 (MQ=60)
TTAGTACAACAGCAGCGGCGTCACGATATGGGGTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTAC < SRR4302547.3143361/94‑1 (MQ=60)
TAGTACAACAGCAGCGGCGTCACGATATGGGGTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACA < SRR4302547.485400/94‑1 (MQ=60)
GTACAACAGCAGCGGCGTCACGATATGGTGTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAAC < SRR4302547.6701465/94‑1 (MQ=60)
ACAACAGCAGCGGCGTCACGATATGGGGTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGACGAGGCGTACAACTG < SRR4302547.5560008/94‑1 (MQ=60)
ACAGCAGCGGCGTCACGATATGGGGTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCG < SRR4302547.2163359/94‑1 (MQ=60)
CAGCAGCGGCGTCACGATATGGGGTCGGTACGTCAGGTCATTGATCTCGATGTTGGTCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGG < SRR4302547.2479627/94‑1 (MQ=60)
CAGCGGCGTCACGATATGGGGTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGT < SRR4302547.3690127/94‑1 (MQ=60)
CAGCGGCGTCACGATATGGGGTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGACGAGGCGTACAACTGGCGGAGT < SRR4302547.101638/94‑1 (MQ=60)
CAGCGGCGTCACGATATGGGGTCGGTACGTCAGGCCATTGATTTCGATGTTGGGGTGTTTCAACTGGCCGGCAGAGGCGTACACCTGGGGGAGT > SRR4302547.1435040/1‑94 (MQ=60)
AGCGGCGTCACGATATGGGGTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTT > SRR4302547.6625241/1‑94 (MQ=60)
AGCGGCGTCACGATATGGGGTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGGT > SRR4302547.5147988/1‑94 (MQ=60)
GCGGCGTCACGATATGGGGTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTT < SRR4302547.4447739/94‑1 (MQ=60)
GCGGCGTCACGATATGGGGTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTT < SRR4302547.1272340/94‑1 (MQ=60)
GGCGTCACGATATGGGGTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTA > SRR4302547.40677/1‑94 (MQ=60)
GGCGTCACGATATGGGGTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTA > SRR4302547.5356390/1‑94 (MQ=60)
GGCGTCACGATATGGGGTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGACGAGGCGTACAACTGGCGGAGTTTTA > SRR4302547.1591418/1‑94 (MQ=60)
GCGTCACGATATGGGGTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTAC < SRR4302547.6504211/94‑1 (MQ=60)
CGTCACGATATGGGGTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACC < SRR4302547.5836317/94‑1 (MQ=60)
CGTCACGATATGGGGTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGCTTTACC > SRR4302547.2380953/1‑94 (MQ=60)
CGTCACGATATGGGGGCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACC < SRR4302547.898377/94‑1 (MQ=60)
GTCACGATATGGGGTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCG > SRR4302547.4600768/1‑94 (MQ=60)
TCACGATATGGGGTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGACGAGGCGTACACCTGGCGGAGTTTTCCCGA > SRR4302547.3406688/1‑94 (MQ=60)
CACGATATGGGGTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGAT > SRR4302547.2915193/1‑94 (MQ=60)
ACGATATGGGGTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATC > SRR4302547.5841862/1‑94 (MQ=60)
CGATATGGGGTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCG < SRR4302547.6112276/94‑1 (MQ=60)
GATATGGGGTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGC > SRR4302547.1506610/1‑94 (MQ=60)
GATATGGGGTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGC < SRR4302547.5908082/94‑1 (MQ=60)
GATATGGGGTCGGTACGTCAGGGCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGC > SRR4302547.3356327/1‑94 (MQ=60)
TATGGGGTCTGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCAT > SRR4302547.6635845/1‑94 (MQ=60)
TATGGGGTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCAT > SRR4302547.4425783/1‑94 (MQ=60)
TATGGGGTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCAT > SRR4302547.3354261/1‑94 (MQ=60)
TGGGGTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGGTTTACCGATCGCATCA > SRR4302547.5243114/1‑94 (MQ=60)
GGGTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAAT < SRR4302547.6191895/94‑1 (MQ=60)
GGTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATA > SRR4302547.1290915/1‑94 (MQ=60)
GGTCAGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATA < SRR4302547.2739627/94‑1 (MQ=60)
GTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATAC < SRR4302547.6543163/94‑1 (MQ=60)
GTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATAC < SRR4302547.525882/94‑1 (MQ=60)
GTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATAC < SRR4302547.2116234/94‑1 (MQ=60)
TCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACT < SRR4302547.139429/94‑1 (MQ=60)
CGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTG > SRR4302547.435879/1‑94 (MQ=60)
GTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTG > SRR4302547.1030763/1‑94 (MQ=60)
GTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGACGAGGGGCAAAACTGGCGGCGGGTTACCGATTGCGTCAATACTGTG > SRR4302547.729371/1‑94 (MQ=60)
TACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGG > SRR4302547.3275735/1‑94 (MQ=60)
TACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGG > SRR4302547.238961/1‑94 (MQ=60)
GTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTA > SRR4302547.5164003/1‑94 (MQ=60)
CAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACT > SRR4302547.2911977/1‑94 (MQ=60)
AGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTG < SRR4302547.1090672/94‑1 (MQ=60)
GGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGC > SRR4302547.6402900/1‑94 (MQ=60)
GTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCG < SRR4302547.5716852/94‑1 (MQ=60)
GTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGACGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCG < SRR4302547.2381025/94‑1 (MQ=60)
TCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGG > SRR4302547.204113/1‑94 (MQ=60)
CATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGG > SRR4302547.2013631/1‑94 (MQ=60)
GATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGCATG > SRR4302547.4245456/1‑94 (MQ=60)
ATCTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGCATGA > SRR4302547.1490525/1‑94 (MQ=60)
CTCGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGCATGAAA > SRR4302547.2515476/1‑94 (MQ=60)
CGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGCATGAAATG > SRR4302547.4381236/1‑94 (MQ=60)
CGATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGCATGAAATG > SRR4302547.5837970/1‑94 (MQ=60)
GATGTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGCATGAAATGT < SRR4302547.1411768/94‑1 (MQ=60)
ATGTTGGGCTGTCTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGCATGAAATGTA < SRR4302547.1880425/94‑1 (MQ=60)
GTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGCATGAAATGTATC < SRR4302547.4530773/94‑1 (MQ=60)
GTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGCATGAAATGTATC < SRR4302547.5729048/94‑1 (MQ=60)
GTTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGCATGAAATGTATC > SRR4302547.3046535/1‑94 (MQ=60)
TTGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGCATGAAATGTATCC < SRR4302547.5356772/94‑1 (MQ=60)
TGGGCTGTTTCAGCTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGCATGAAATGTATCCG < SRR4302547.5396189/94‑1 (MQ=60)
TGGGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGCATGAAATGTATCCG < SRR4302547.2109436/94‑1 (MQ=60)
GGCTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGCATGAAATGTATCCGAG < SRR4302547.2027828/94‑1 (MQ=60)
CTGTTTCAACTGGCGGGACGAGCCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGCATGAAATGTATCCGAGCA < SRR4302547.5724362/94‑1 (MQ=60)
CTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGCATGAAATGTATCCGAGCA > SRR4302547.1370494/1‑94 (MQ=60)
CTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGCATGAAATGTATCCGAGCA > SRR4302547.4103057/1‑94 (MQ=60)
CTGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGCTACTGCGGGCATGAAATGTATCCGAGCA > SRR4302547.6294043/1‑94 (MQ=60)
TGTTTCAACTGGCCGGGCGAGGCGTACAACTGGGGGAGCTTTACCGATCGCATAAATACTGTGGTTACTGAGGGCATGAAATGTATCCGAGCAA > SRR4302547.747489/1‑94 (MQ=60)
TGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGCATGAAATGTATCCGAGCAA > SRR4302547.6550352/1‑94 (MQ=60)
TGTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGCATGAAATGTATCCGAGCAA < SRR4302547.3963519/94‑1 (MQ=60)
GTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGCATGAAATGTATCCGCGCAAA > SRR4302547.1914647/1‑94 (MQ=60)
GTTTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGCATGAAATGTATCCGAGCAAA < SRR4302547.1939041/94‑1 (MQ=60)
GTCTCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGCATGAAATGTATCCGAGCAAA > SRR4302547.4335123/1‑94 (MQ=60)
TTTCAACTGGCCGGACGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGCATGAAATGTATCCGAGCAAAA < SRR4302547.4521642/94‑1 (MQ=60)
TCAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGCATGAAATGTATCCGAGCAAAACC > SRR4302547.5893645/1‑94 (MQ=60)
CAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGCATGAAATGTATCCGAGCAAAACCG < SRR4302547.6560967/94‑1 (MQ=60)
CAACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGCATGAAATGTATCCGAGCAAAACCG > SRR4302547.686607/1‑94 (MQ=60)
CAACTGGCCGGACGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGCATGAAATGTATCCGAGCAAAACCG < SRR4302547.1598588/94‑1 (MQ=60)
ACTGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGCATGAAATGTATCCGAGCAAAACCGAA > SRR4302547.2586703/1‑94 (MQ=60)
TGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGCATGAAATGTATCCGAGCAAAACCGAATG < SRR4302547.4449414/94‑1 (MQ=60)
CGGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCCATCGCATAAAATCTGAGGTTACTGCGGGCATGCAATCTATCCGATCAACACC‑AATGG > SRR4302547.3050220/1‑94 (MQ=44)
GGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGCATGAAATGTATCCGAGCAAAACCGAATGG > SRR4302547.5992439/1‑94 (MQ=60)
GGCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGCATGAAATGTATCCGAGCAAAACCGAATGG < SRR4302547.4727611/94‑1 (MQ=60)
GGCCGGACGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGCATGAAATGTATCCGAGCAAAACCGAATGG < SRR4302547.5024789/94‑1 (MQ=60)
GACCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGCATGAAATGTATCCGAGCAAAACCGAATGG < SRR4302547.2441494/94‑1 (MQ=60)
GCCGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGCATGAAATGTATCCGAGCAAAACCGAATGGG < SRR4302547.4524404/94‑1 (MQ=60)
GCCGGGCGAGGCGTACAACTAGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGCATGAAATGTATCCGAGCAAAACCGAATGGG > SRR4302547.6630790/1‑94 (MQ=60)
CGGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGCATGAAATGTATCCGAGCAAAACCGAATGGGCG < SRR4302547.1379700/94‑1 (MQ=60)
GGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGCATGAAATGTATCCGAGCAAAACCGAATGGGCGA > SRR4302547.6776559/1‑94 (MQ=60)
GGGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGCATGAAATGTATCCGAGCAAAACCGAATGGGCGA > SRR4302547.3451819/1‑94 (MQ=60)
GGACGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGCATGAAATGTATCCGAGCAAAACCGAATGGGCGA > SRR4302547.3040200/1‑94 (MQ=60)
GGCGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGCATGAAATGTATCCGAGCAAAACCGAATGGGCGAT < SRR4302547.729228/94‑1 (MQ=60)
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CTGTTTGGTTAGTACAACAGCAGCGGCGTCACGATATGGGGTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGACGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGCATGAAATGTATCCGAGCAAAACCGAATGGGCGAT > NC_000913/4194638‑4194821
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
