Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
593 |
264.2 |
13311096 |
97.8% |
13018251 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,221,520 |
T→C |
R38R (CGT→CGC) |
metH → |
B12‑dependent homocysteine‑N5‑methyltetrahydrofolate transmethylase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,221,520 | 0 | T | C | 80.9%
| 562.6
/ 132.1
| 251 | R38R (CGT→CGC) | metH | B12‑dependent homocysteine‑N5‑methyltetrahydrofolate transmethylase |
| Reads supporting (aligned to +/- strand): ref base T (19/29); new base C (87/116); total (106/145) |
| Fisher's exact test for biased strand distribution p-value = 7.46e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 265 total aligned reads displayed.
TGCGTGCGCAGTTAAATGAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGATCGCCGCTATCCACA > NC_000913/4221429‑4221611
|
tgcgtgcgCAGTTAAATGAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCgtg < 1:5714321/93‑1 (MQ=255)
gcgtgcgCAGTTAAATGAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCgcgg < 2:1084264/93‑1 (MQ=255)
gtgcgCAGTTAAATGAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCgcggtg > 2:1737264/1‑93 (MQ=255)
tgcgCAGTTAAATGAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGa < 1:221217/93‑1 (MQ=255)
gcgcAGTTAAATGAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGaa > 1:1758162/1‑93 (MQ=255)
gcgcAGTTAAATGAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGaa > 2:4747156/1‑93 (MQ=255)
cgcAGTTAAATGAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAAc < 2:2494315/93‑1 (MQ=255)
cAGTTAAATGAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGc > 2:1123675/1‑93 (MQ=255)
gTTAAATGAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAACGCtt < 1:6381172/93‑1 (MQ=255)
gTTAAATGAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCtt < 1:5785253/93‑1 (MQ=255)
gTTAAATGAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCtt > 2:3325251/1‑93 (MQ=255)
gTTAAATGAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCtt < 1:3453970/93‑1 (MQ=255)
gTTAAATGAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCtt < 2:3516346/93‑1 (MQ=255)
aaaTGAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGc < 2:2795333/93‑1 (MQ=255)
aaTGAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAAGGCTTTGcc > 2:1931897/1‑93 (MQ=255)
tGAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGa < 1:3676169/93‑1 (MQ=255)
gAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGAc > 2:4379349/1‑93 (MQ=255)
aaCGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACt < 1:1106336/93‑1 (MQ=255)
aCGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTg < 1:4267321/93‑1 (MQ=255)
gTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGc > 1:3187490/1‑93 (MQ=255)
gTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGc > 1:686050/1‑93 (MQ=255)
gTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGc < 2:6021900/93‑1 (MQ=255)
tATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGcc < 1:6327159/93‑1 (MQ=255)
aTTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCa < 2:6155851/93‑1 (MQ=255)
aTTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCa < 1:2117623/93‑1 (MQ=255)
ttCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCAt > 1:1007198/1‑93 (MQ=255)
tCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATg < 1:2460284/93‑1 (MQ=255)
tCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATg < 2:3239474/93‑1 (MQ=255)
gTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGAc > 1:5586005/1‑93 (MQ=255)
gTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGAc < 2:2748728/93‑1 (MQ=255)
tGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCTACTGGCCATGCGAcc < 1:5384852/93‑1 (MQ=255)
gCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCt < 1:1781141/93‑1 (MQ=255)
cTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTc < 1:4946585/93‑1 (MQ=255)
cTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTc > 1:6522500/1‑93 (MQ=255)
ggACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAACGCTTTGCCGACTGGCCATGCGACCTCaa > 2:2243675/1‑93 (MQ=255)
ggACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCaa < 2:256978/93‑1 (MQ=255)
gACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCaaa < 2:3372062/93‑1 (MQ=255)
gACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCaaa > 2:6379265/1‑93 (MQ=255)
gACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCaaa < 2:5361283/93‑1 (MQ=255)
aCGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAg < 2:2786241/93‑1 (MQ=255)
cggcggTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAgg > 1:2360195/1‑93 (MQ=255)
cggcggTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAgg < 1:147870/93‑1 (MQ=255)
cggTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGcaa > 1:5251331/1‑93 (MQ=255)
cggGATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGCTGAACGCTTTGCCGACTGGCCATGCGACCTCACCGGcaa > 1:4089426/1‑93 (MQ=255)
ggTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAACGCTTTGCCGACTGGCCATGCGTCCTCAAAGGcaac > 2:3790992/1‑93 (MQ=255)
ggTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGcaac < 2:3020913/93‑1 (MQ=255)
ggTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGcaac < 2:3523888/93‑1 (MQ=255)
ggTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGccac > 1:4759071/1‑93 (MQ=255)
gTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGcaaca > 1:4688060/1‑93 (MQ=255)
gTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGcaaca > 2:2625130/1‑93 (MQ=255)
aTGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCaacaac > 1:6579894/1‑93 (MQ=255)
tGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACg < 2:862998/93‑1 (MQ=255)
gggCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGa > 1:1409205/1‑93 (MQ=255)
gCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGAcc < 2:6207196/93‑1 (MQ=255)
gCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGAcc < 2:1391910/93‑1 (MQ=255)
gCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGAcc < 2:4446367/93‑1 (MQ=255)
gCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGAcc < 1:3075730/93‑1 (MQ=255)
gCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGAcc < 2:3449041/93‑1 (MQ=255)
cACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACct > 1:5746366/1‑93 (MQ=255)
aCCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACctg > 1:6062341/1‑93 (MQ=255)
ccATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACctgc < 2:355247/93‑1 (MQ=255)
cATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACctgct > 2:1367696/1‑93 (MQ=255)
cATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACctgct < 2:2094242/93‑1 (MQ=255)
cATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACctgct < 2:5227228/93‑1 (MQ=255)
cATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACctgct < 1:2063800/93‑1 (MQ=255)
cATGATCCAGAGTTATCGACTGAACGAAGCCGATTCTCGCGGAGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACctgct > 2:4674855/1‑93 (MQ=255)
tCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTAc < 1:3099667/93‑1 (MQ=255)
tCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTAc < 2:1430318/93‑1 (MQ=255)
agagTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCa < 1:3389363/93‑1 (MQ=255)
gagTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAg < 2:5487987/93‑1 (MQ=255)
gagTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAg < 1:2769898/93‑1 (MQ=255)
agTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGt < 1:966703/93‑1 (MQ=255)
gTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTa < 1:1615617/93‑1 (MQ=255)
tATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTaaa > 2:4276415/1‑93 (MQ=255)
tCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAAcc > 2:5918947/1‑93 (MQ=255)
gACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCgg > 2:2408096/1‑93 (MQ=255)
aCTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGa > 2:5009626/1‑93 (MQ=255)
aCTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGa < 1:5074448/93‑1 (MQ=255)
aCTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGa < 2:3684128/93‑1 (MQ=255)
cTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGaa > 1:1644813/1‑93 (MQ=255)
gAACGAAGCCGATTTTCGTGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGt < 1:3754125/93‑1 (MQ=255)
gAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGt > 1:2841638/1‑93 (MQ=255)
gAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGCCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGt < 2:5899287/93‑1 (MQ=255)
aCGAAGCCGATTTTCGTGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGa > 2:2996710/1‑93 (MQ=255)
aCGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGa < 2:3831233/93‑1 (MQ=255)
aCGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGa > 1:271993/1‑93 (MQ=255)
aCGAAGCCCATTTTCGTGGTGAACGCTTTTGCCACTTGCCATGCCACCTTAAAGGCAACAACGACCTGCTTGTACTCAGTAAACCGGAAGTGa < 1:4848038/93‑1 (MQ=255)
cGAAGCCGATTTTCGTGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGAt < 1:5961392/93‑1 (MQ=255)
cGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGAt < 2:3732847/93‑1 (MQ=255)
cGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGAt < 2:5645454/93‑1 (MQ=255)
cGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGAt < 2:455694/93‑1 (MQ=255)
gAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAACGGCAACAACGACCTGCTGGTACTCGGTAAACCGGAAGTGATc < 2:3569145/93‑1 (MQ=255)
aaGCCGATTTTCGTGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGATcg < 1:2669046/93‑1 (MQ=255)
aGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGATcgc > 2:6496365/1‑93 (MQ=255)
aGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGATcgc > 2:1534864/1‑93 (MQ=255)
gCCGATTTTCGTGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGATcgcc < 1:432808/93‑1 (MQ=255)
ttttCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGATCGCCGCTAt > 2:1208616/1‑93 (MQ=255)
tttCGTGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGATCGCCGCTATc < 2:6336961/93‑1 (MQ=255)
ttCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGATCGCCGCTATcc < 2:3760475/93‑1 (MQ=255)
tCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGATCGCCGCTATCca > 1:513302/1‑93 (MQ=255)
|
TGCGTGCGCAGTTAAATGAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGATCGCCGCTATCCACA > NC_000913/4221429‑4221611
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CTGCGTGCGCAGTTAAATGAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGATCGCCGCTATCCACAAC > NC_000913/4221428‑4221613
|
CTGCGTGCGCAGTTAAATGAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCG > SRR4302547.5629951/1‑94 (MQ=60)
TGCGTGCGCAGTTAAATGAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGG < SRR4302547.5832342/94‑1 (MQ=60)
GCGTGCGCAGTTAAATGAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGT < SRR4302547.5982950/94‑1 (MQ=60)
GTGCGCAGTTAAATGAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGA > SRR4302547.5851954/1‑94 (MQ=60)
GTGCGCAGTTAAATGAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGA < SRR4302547.964965/94‑1 (MQ=60)
TGCGCAGTTAAATGAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAA > SRR4302547.1792982/1‑94 (MQ=60)
TGCGCAGTTAAATGAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAA < SRR4302547.225381/94‑1 (MQ=60)
TGCGCAGTTAAATGAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAA < SRR4302547.2120459/94‑1 (MQ=60)
CGCAGTTAAATGACCGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAACG < SRR4302547.3772014/94‑1 (MQ=60)
CGCAGTTAAATGAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACG > SRR4302547.4235412/1‑94 (MQ=60)
CAGTTAAATGAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCT > SRR4302547.1808515/1‑94 (MQ=60)
AGTTAAATGAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTT < SRR4302547.5780388/94‑1 (MQ=60)
GTTAAATGAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAACGCTTT < SRR4302547.6514334/94‑1 (MQ=60)
GTTAAATGAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTT > SRR4302547.3150402/1‑94 (MQ=60)
GTTAAATGAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTT < SRR4302547.3524381/94‑1 (MQ=60)
GTTAAATGAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTT < SRR4302547.5904919/94‑1 (MQ=60)
TTAAATGAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTG < SRR4302547.6022189/94‑1 (MQ=60)
TTAAATGAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTG < SRR4302547.6479765/94‑1 (MQ=60)
TTAAATGAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTG < SRR4302547.3230096/94‑1 (MQ=60)
AAATGAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAACGCTTTGCC > SRR4302547.1678330/1‑94 (MQ=60)
ATGAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAACGCTTTGCCGA < SRR4302547.3273671/94‑1 (MQ=60)
ATGAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGA > SRR4302547.4838011/1‑94 (MQ=60)
TGAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGAC < SRR4302547.3751169/94‑1 (MQ=60)
GAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACT < SRR4302547.3096133/94‑1 (MQ=60)
AACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAACGCTTTGCCGACTG < SRR4302547.3772414/94‑1 (MQ=60)
AACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTG < SRR4302547.3426446/94‑1 (MQ=60)
AACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTG < SRR4302547.5087300/94‑1 (MQ=60)
AACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTG < SRR4302547.1128604/94‑1 (MQ=60)
ACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGG < SRR4302547.4354806/94‑1 (MQ=60)
ACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGG < SRR4302547.4358275/94‑1 (MQ=60)
CGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGC > SRR4302547.3251006/1‑94 (MQ=60)
CGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGC > SRR4302547.698713/1‑94 (MQ=60)
CGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGC > SRR4302547.5375203/1‑94 (MQ=60)
TATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCA > SRR4302547.3623100/1‑94 (MQ=60)
TATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCA < SRR4302547.6458740/94‑1 (MQ=60)
ATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCAT > SRR4302547.1026864/1‑94 (MQ=60)
ATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCAT < SRR4302547.2159831/94‑1 (MQ=60)
TTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATG > SRR4302547.2213868/1‑94 (MQ=60)
TCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGC > SRR4302547.4544800/1‑94 (MQ=60)
TCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGC < SRR4302547.2829587/94‑1 (MQ=60)
TCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGC < SRR4302547.2510010/94‑1 (MQ=60)
CTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAACGCTTTGCCGACTGGCCATGCG > SRR4302547.4171059/1‑94 (MQ=60)
CTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCG < SRR4302547.2301852/94‑1 (MQ=60)
TGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAACGCTTTGCCGACTGGCCATGCGA > SRR4302547.615333/1‑94 (MQ=60)
GGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGAC > SRR4302547.2792265/1‑94 (MQ=60)
GGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGAC > SRR4302547.5701219/1‑94 (MQ=60)
GTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACC > SRR4302547.6505059/1‑94 (MQ=60)
TGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAACGCTTTGCCGACTGGCCATGCGACCT > SRR4302547.2173516/1‑94 (MQ=60)
TGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCTACTGGCCATGCGACCT < SRR4302547.5496040/94‑1 (MQ=60)
GCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTC < SRR4302547.1816437/94‑1 (MQ=60)
GCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTC > SRR4302547.6658286/1‑94 (MQ=60)
CTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCA < SRR4302547.5049028/94‑1 (MQ=60)
TGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAA < SRR4302547.6406241/94‑1 (MQ=60)
GACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAG < SRR4302547.1660668/94‑1 (MQ=60)
ACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGG > SRR4302547.2408026/1‑94 (MQ=60)
ACGGCGGTATGGGCACCATGATCCAGAGTTAGCGACTGAACGAAGCGGATTTTCGTGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGG < SRR4302547.4896864/94‑1 (MQ=60)
CGGCGGTATGGGCCCCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGC < SRR4302547.1278378/94‑1 (MQ=60)
CGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGC < SRR4302547.150556/94‑1 (MQ=60)
GGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCA > SRR4302547.4997318/1‑94 (MQ=60)
GCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAA > SRR4302547.5359460/1‑94 (MQ=60)
GCGGGATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGCTGAACGCTTTGCCGACTGGCCATGCGACCTCACCGGCAA > SRR4302547.4172586/1‑94 (MQ=60)
CGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCCAC > SRR4302547.4857678/1‑94 (MQ=60)
GGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACA > SRR4302547.1821005/1‑94 (MQ=60)
GGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACA > SRR4302547.4785154/1‑94 (MQ=60)
GTATGGGCACCATGATCCAGAGTTAACGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAA < SRR4302547.274350/94‑1 (MQ=60)
TATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAAC > SRR4302547.6716911/1‑94 (MQ=60)
TATGGGCACCATGATCCAGAGTGATCGACTGAACGAAGCCGATTTTCGCGGTGACCGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAAC < SRR4302547.2069051/94‑1 (MQ=60)
TGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGA > SRR4302547.1437393/1‑94 (MQ=60)
GGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACC < SRR4302547.6576952/94‑1 (MQ=60)
GGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACC < SRR4302547.135373/94‑1 (MQ=60)
GCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCT > SRR4302547.5865138/1‑94 (MQ=60)
GCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCT < SRR4302547.6697715/94‑1 (MQ=60)
GCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCT < SRR4302547.3136827/94‑1 (MQ=60)
CACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTG < SRR4302547.3960705/94‑1 (MQ=60)
CACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTG > SRR4302547.6188092/1‑94 (MQ=60)
CATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTG < SRR4302547.6710592/94‑1 (MQ=60)
CATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTG < SRR4302547.2104981/94‑1 (MQ=60)
CATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTG < SRR4302547.2547643/94‑1 (MQ=60)
ATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGG < SRR4302547.5817596/94‑1 (MQ=60)
ATGAGCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGG < SRR4302547.2769827/94‑1 (MQ=60)
GATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGCACGCTTTGCCGACTAGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTC > SRR4302547.4823624/1‑94 (MQ=60)
GATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTA < SRR4302547.5464379/94‑1 (MQ=60)
TCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACT < SRR4302547.3161068/94‑1 (MQ=60)
CCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTC > SRR4302547.1522982/1‑94 (MQ=60)
CCAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTC > SRR4302547.1805513/1‑94 (MQ=60)
CAGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCA > SRR4302547.4336560/1‑94 (MQ=60)
AGAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAG < SRR4302547.3458314/94‑1 (MQ=60)
GAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGT > SRR4302547.1481922/1‑94 (MQ=60)
GAGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGT < SRR4302547.2825393/94‑1 (MQ=60)
AGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTA < SRR4302547.985474/94‑1 (MQ=60)
AGTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTA > SRR4302547.2624157/1‑94 (MQ=60)
GTTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAA < SRR4302547.1647603/94‑1 (MQ=60)
TTATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAA > SRR4302547.5866729/1‑94 (MQ=60)
ATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACC < SRR4302547.5280934/94‑1 (MQ=60)
ATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACC < SRR4302547.1634348/94‑1 (MQ=60)
ATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACC > SRR4302547.2881146/1‑94 (MQ=60)
ATCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACC < SRR4302547.2379574/94‑1 (MQ=60)
TCGACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCG > SRR4302547.3691799/1‑94 (MQ=60)
ACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAA < SRR4302547.5179135/94‑1 (MQ=60)
ACTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAA > SRR4302547.1677308/1‑94 (MQ=60)
CTGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAG > SRR4302547.4459530/1‑94 (MQ=60)
TGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGT > SRR4302547.2898420/1‑94 (MQ=60)
TGAACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGT < SRR4302547.4987948/94‑1 (MQ=60)
GAACGAAGCCGATTTTCGTGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTG < SRR4302547.3830722/94‑1 (MQ=60)
AACGAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGA > SRR4302547.277083/1‑94 (MQ=60)
ACGAAGCCGATTTTCGTGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGAT < SRR4302547.2412526/94‑1 (MQ=60)
ACGAAGCCCATTTTCGTGGTGAACGCTTTTGCCACTTGCCATGCCACCTTAAAGGCAACAACGACCTGCTTGTACTCAGTAAACCGGAAGTGAT < SRR4302547.4948511/94‑1 (MQ=60)
CGAAGCCGATTTTCGTGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGATC < SRR4302547.6085015/94‑1 (MQ=60)
GAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGATCG < SRR4302547.6739959/94‑1 (MQ=60)
GAAGCCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGATCG < SRR4302547.107147/94‑1 (MQ=60)
AAGCCGATTTTCGTGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGATCGC < SRR4302547.2722671/94‑1 (MQ=60)
GCCGATTTTCGTGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGATCGCCG < SRR4302547.440823/94‑1 (MQ=60)
CCGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGATCGCCGC > SRR4302547.3478248/1‑94 (MQ=60)
CGATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGATCGCCGCT > SRR4302547.2928114/1‑94 (MQ=60)
GATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGATCGCCGCTA > SRR4302547.67215/1‑94 (MQ=60)
ATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGATCGCCGCTAT > SRR4302547.5264032/1‑94 (MQ=60)
ATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGATCGCCGCTAT < SRR4302547.5066675/94‑1 (MQ=60)
ATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGATCGCCGCTAT > SRR4302547.5839886/1‑94 (MQ=60)
ATTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGATCGCCGCTAT > SRR4302547.6143036/1‑94 (MQ=60)
TTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGATCGCCGCTATC < SRR4302547.5221576/94‑1 (MQ=60)
TTTTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGATCGCCGCTATC < SRR4302547.3192731/94‑1 (MQ=60)
TTTCGTGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGATCGCCGCTATCC < SRR4302547.1662278/94‑1 (MQ=60)
TTCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGATCGCCGCTATCCA > SRR4302547.522622/1‑94 (MQ=60)
TCGCGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGATCGCCGCTATCCAC > SRR4302547.2173278/1‑94 (MQ=60)
CGTGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGATCGCCGCTATCCACA > SRR4302547.5626285/1‑94 (MQ=60)
CGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGATCGCCGCTATCCACAAC < SRR4302547.4794566/94‑1 (MQ=60)
CGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGATCGCCGCTATCCACAAC > SRR4302547.4926139/1‑94 (MQ=60)
|
CTGCGTGCGCAGTTAAATGAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGATCGCCGCTATCCACAAC > NC_000913/4221428‑4221613
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
