Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
593 |
264.2 |
13311096 |
97.8% |
13018251 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,347,223 |
A→G |
H130H (CAT→CAC) |
yjdG ← |
putative 2‑component transcriptional regulator |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,347,223 | 0 | A | G | 87.6%
| 762.3
/ 83.9
| 275 | H130H (CAT→CAC) | yjdG | putative 2‑component transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base A (13/21); new base G (130/111); total (143/132) |
| Fisher's exact test for biased strand distribution p-value = 1.00e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.78e-01 |
Only 100 of 284 total aligned reads displayed.
CGTTAAGCCTTTTGGCAAGCGACGAGGATCCTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGATGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAGCCTGGAAGGGTTTGATCAGGTAATCCACG > NC_000913/4347133‑4347313
|
cgTTAAGCCTTTTGGCAAGCGACGAGGATCCTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTg > 1:6315531/1‑93 (MQ=255)
gTTAAGCCTTTTGGCAAGCGACGAGGATCCTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGATGt < 1:6553706/93‑1 (MQ=255)
ttAAGCCTTTTGGCAAGCGACGAGGATCCTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATCATACTGGTGtt > 2:1037280/1‑93 (MQ=255)
ttAAGCCTTTTGGCAAGCGACGAGGATCCTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGtt > 2:3264132/1‑93 (MQ=255)
ttAAGCCTTTTGGCAAGCGACGAGGATCCTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGtt < 2:1004097/93‑1 (MQ=255)
tAAGCCTTTTGGCAAGCGACGAGGATCCTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGttt < 1:110699/93‑1 (MQ=255)
aaGCCTTTTGGCAAGCGACGAGGATCCTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGtttt < 1:1005985/93‑1 (MQ=255)
gCCTTTTGGCAAGCGACGAGGATCCTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTc < 2:1208537/93‑1 (MQ=255)
ccTTTTGGCAAGCGACGAGGATCCTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTcc < 2:5653733/93‑1 (MQ=255)
cTTTTGGCAAGCGACGAGGATCCTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCa < 2:1676364/93‑1 (MQ=255)
ttttGGCAAGCGACGAGGATCCTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAg > 2:5395589/1‑93 (MQ=255)
ttttGGCAAGCGACGAGGATCCTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAg > 2:2938605/1‑93 (MQ=255)
tttGGCAAGCGACGAGGATCCTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAgc < 1:3171652/93‑1 (MQ=255)
ttGGCAAGCGACGAGGATCCTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAgcg > 1:6038662/1‑93 (MQ=255)
ttGGCAAGCGACGAGGATCCTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAgcg < 1:4363413/93‑1 (MQ=255)
tGGCAAGCGACGAGGATCCTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAgcgc < 2:1604209/93‑1 (MQ=255)
ggCAAGCGACGAGGATCCTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGcc > 1:6158588/1‑93 (MQ=255)
ggCAAGCGACGAGGATCCTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGcc > 1:1816906/1‑93 (MQ=255)
ggCAAGCGACGAGGATCCTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGCTTTTCCAGCGcc < 1:5309218/93‑1 (MQ=255)
gaaGAGACGAGGATCCTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGATGTTTTTCCAGCGCCAt < 1:5091475/92‑1 (MQ=255)
aGCGACGAGGATCCTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCAttt < 2:2567705/93‑1 (MQ=255)
aGCGACGAGGATCCTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGATGTTTTTCCAGCGCCAttt < 2:3835559/93‑1 (MQ=255)
acgaGGATCCTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCtt > 1:837917/1‑93 (MQ=255)
acgaGGATCCTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCtt > 1:1904178/1‑93 (MQ=255)
acgaGGATCCTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCtt > 2:3938281/1‑93 (MQ=255)
cgaGGATCCTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCttt > 1:4004291/1‑93 (MQ=255)
aGGATCCTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTg > 2:6632102/1‑93 (MQ=255)
ggATCCTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTgc < 2:2500314/93‑1 (MQ=255)
gATCCTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTgcc > 2:6498534/1‑93 (MQ=255)
cggTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCa < 1:3260751/91‑1 (MQ=255)
cTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCa > 2:4129598/1‑93 (MQ=255)
cTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCa < 2:1424943/93‑1 (MQ=255)
tGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAg > 1:2888027/1‑93 (MQ=255)
gTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGc > 2:3539409/1‑93 (MQ=255)
gTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGc > 2:5849605/1‑93 (MQ=255)
ttCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGcc < 1:4455991/93‑1 (MQ=255)
tCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCg < 1:3620972/93‑1 (MQ=255)
tCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCg < 1:1223096/93‑1 (MQ=255)
tCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGATGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCg < 1:5239738/93‑1 (MQ=255)
cGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCgg < 2:1139659/93‑1 (MQ=255)
gTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGt < 2:3430330/93‑1 (MQ=255)
ttGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCCTAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTg > 2:5346302/1‑93 (MQ=255)
ttGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTg > 1:3737294/1‑93 (MQ=255)
ttGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTCCTTTTGCCGCCAGCCGGTg < 1:6416637/93‑1 (MQ=255)
tGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGATGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGa > 2:1980862/1‑93 (MQ=255)
ggAGGTTCTGCGGTGGATGAGCTGATCAAGCTCCGCCTGGTCATAATACTGATGTTTTTCCGGCTCCATTTTCTTTTGCCGCCAGCCGGTGAg < 2:4356430/93‑1 (MQ=255)
gAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAgc > 2:2813839/1‑93 (MQ=255)
aGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAgcg < 2:6293986/93‑1 (MQ=255)
aGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAgcg > 2:3083547/1‑93 (MQ=255)
aGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAgcc > 2:783059/1‑92 (MQ=255)
aGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGATGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAgcg < 1:2311111/93‑1 (MQ=255)
gctgcCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCctc < 1:453284/93‑1 (MQ=255)
gctgcCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCctc < 1:5133472/93‑1 (MQ=255)
ctgcCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCctct > 1:3446289/1‑93 (MQ=255)
tgcCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCtt < 1:2286703/93‑1 (MQ=255)
tgcCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCtt < 1:266456/93‑1 (MQ=255)
tgcCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGATGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCtt < 2:6258876/93‑1 (MQ=255)
cGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCaa > 1:761234/1‑93 (MQ=255)
cGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGATGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCaa > 2:4067785/1‑93 (MQ=255)
tGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAg > 1:5941280/1‑93 (MQ=255)
gATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCg > 2:1829666/1‑93 (MQ=255)
gATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCg < 1:408918/93‑1 (MQ=255)
gATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGATGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCg > 2:2064891/1‑93 (MQ=255)
aTTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCgg < 1:4580696/93‑1 (MQ=255)
tAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGa < 1:542066/93‑1 (MQ=255)
tAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGa < 2:5484219/93‑1 (MQ=255)
aGCTGAGCAAGCTCGGCCTGGTCATAATACTGATGTTTTTCCAGCACCATTTTCTTTAGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGaa < 2:2665363/93‑1 (MQ=255)
tGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAGcc < 1:2718981/93‑1 (MQ=255)
tGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAGcc < 1:1708067/93‑1 (MQ=255)
tGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAGcc < 1:5835016/93‑1 (MQ=255)
gATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAGcat < 2:2442673/93‑3 (MQ=255)
aTCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAGCCTg < 2:3128266/93‑1 (MQ=255)
aaGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAGCCTGGaa < 2:2157604/93‑1 (MQ=255)
aGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAGCCTGGAAg > 2:4930830/1‑93 (MQ=255)
gCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAGCCTGGAAgg > 1:1740645/1‑93 (MQ=255)
tCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAGCCTGGAAGGGt > 2:614364/1‑93 (MQ=255)
tCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAGCCTGGAAGGGt < 2:3628254/93‑1 (MQ=255)
cGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAGCCTGGAAGGGtt < 1:1631850/93‑1 (MQ=255)
cGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAGCCTGGAAGGGtt < 1:6180238/93‑1 (MQ=255)
gCCTGGTCATAATACTGGGGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAGCCTGGAAGGGTTTg > 1:3350574/1‑93 (MQ=255)
ccTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAGCCTGGAAGGGTTTGa < 1:4645648/93‑1 (MQ=255)
cTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAGCCTGGAAGGGTTTGAt > 2:5593246/1‑93 (MQ=255)
tGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAGCCTGGAAGGGTTTGATc < 1:1389196/93‑1 (MQ=255)
tGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAGCCTGGAAGGGTTTGATc > 2:6444863/1‑93 (MQ=255)
ggTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGGGCGCCTCTTCAAAGCGGGAAGCCTGGAAGGGTTTGATCa < 1:5726934/93‑1 (MQ=255)
ggTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAGCCTGGAAGGGTTTGATCa > 1:4872100/1‑93 (MQ=255)
gTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAGCCTGGAAGGGTTTGATCAg > 1:1999988/1‑93 (MQ=255)
gTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAGCCTGGAAGGGTTTGATCAg > 2:3851025/1‑93 (MQ=255)
gTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAGCCTGGAAGGGTTTGATCAg > 2:3154384/1‑93 (MQ=255)
gTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAGCCTGGAAGGGTTTGATCAg > 1:4056473/1‑93 (MQ=255)
tCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAGCCTGGAAGGGTTTGATCAgg > 2:6213063/1‑93 (MQ=255)
cATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAGCCTGGAAGGGTTTGATCAGGt < 2:4447640/93‑1 (MQ=255)
taataCTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAGCCTGGAAGGGTTTGATCAGGTaa > 1:2221536/1‑93 (MQ=255)
aataCTGATGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAGCCTGGAAGGGTTTGATCAGGTAAt < 1:2455128/93‑1 (MQ=255)
ataCTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAGCCTGGAAGGGTTTGATCAGGTAATc > 1:1334428/1‑93 (MQ=255)
taCTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAGCCTGGAAGGGTTTGATCAGGTAATcc < 2:3593906/93‑1 (MQ=255)
taCTGATGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAGCCTGGAAGGGTTTGATCAGGTAATcc > 2:3756424/1‑93 (MQ=255)
aCTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAGCCTGGAAGGGTTTGATCAGGTAATCCa > 2:5013468/1‑93 (MQ=255)
aCTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAGCCTGGAAGGGTTTGATCAGGTAATCCa < 1:3177578/93‑1 (MQ=255)
tGATGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAGCCTGGAAGGGCTTGATCAGGTAATCCACg > 2:6065280/1‑93 (MQ=255)
|
CGTTAAGCCTTTTGGCAAGCGACGAGGATCCTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGATGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAGCCTGGAAGGGTTTGATCAGGTAATCCACG > NC_000913/4347133‑4347313
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGGCGTTAAGCCTTTTGGCAAGCGACGAGGATCCTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGATGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAGCCTGGAAGGGTTTGATCAGGTAATCCACGACA > NC_000913/4347130‑4347316
|
CGGCGTTAAGCCTTTTGGCAAGCGACGAGGATCCTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGG > SRR4302547.3546704/1‑94 (MQ=60)
GGCGTTAAGCCTTTTGGCAAGCGACGAGGATCCTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGT > SRR4302547.6179332/1‑94 (MQ=60)
GGCGTTAAGCCTTTTGGCAAGCGACGAGGATCCTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGT > SRR4302547.3702263/1‑94 (MQ=60)
GCGTTAAGCCTTTTGGCAAGCGACGAGGATCCTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTG > SRR4302547.2310233/1‑94 (MQ=60)
GCGTTAAGCCTTTTGGCAAGCGACGAGGATCCTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTG > SRR4302547.6446855/1‑94 (MQ=60)
CGTTAAGCCTTTTGGCAAGCGACGAGGATCCTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGT < SRR4302547.2438360/94‑1 (MQ=60)
CGTTAAGCCTTTTGGCAAGCGACGAGGATCCTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATAATGGTGT > SRR4302547.2438669/1‑94 (MQ=60)
GTTAAGCCTTTTGGCAAGCGACGAGGATCCTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTT > SRR4302547.5230543/1‑94 (MQ=60)
GTTAAGCCTTTTGGCAAGCGACGAGGATCCTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGATGTT < SRR4302547.6690154/94‑1 (MQ=60)
TTAAGCCTTTTGGCAAGCGACGAGGATCCTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTT > SRR4302547.6117709/1‑94 (MQ=60)
TAAGCCTTTTGGCAAGCGACGAGGATCCTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTT < SRR4302547.112718/94‑1 (MQ=60)
AAGCCTTTTGGCAAGCGACGAGGATCCTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTT < SRR4302547.1025625/94‑1 (MQ=60)
GCCTTTTGGCAAGCGACGAGGATCCTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCC < SRR4302547.6659218/94‑1 (MQ=60)
CCTTTTGGCAAGCGACGAGGATCCTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCA > SRR4302547.2318104/1‑94 (MQ=60)
CTTTTGGCAAGCGACGAGGATCCTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAG > SRR4302547.4050615/1‑94 (MQ=60)
CTTTTGGCAAGCGACGAGGATCCTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAG > SRR4302547.6484999/1‑94 (MQ=60)
CTTTTGGCAAGCGACGAGGATCCTGTTCGTTGGAGCTGCTGCCGTGAATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAG < SRR4302547.4643380/94‑1 (MQ=60)
TTTGGCAAGCGACGAGGATCCTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCG < SRR4302547.3234783/94‑1 (MQ=60)
TTTGGCAAGCGACGAGGATCCTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCG > SRR4302547.6163963/1‑94 (MQ=60)
TTTGGCAAGCGACGAGGATCCTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCG < SRR4302547.849326/94‑1 (MQ=60)
TTGGCAAGCGACGAGGATCCTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGC < SRR4302547.4453024/94‑1 (MQ=60)
TGGCAAGCGACGAGGATCCTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCC > SRR4302547.1852815/1‑94 (MQ=60)
TGGCAAGCGACGAGGATCCTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCC > SRR4302547.6286407/1‑94 (MQ=60)
TGGCAAGCGACGAGGATCCTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGATGTTTTTCCAGCGCC > SRR4302547.3569338/1‑94 (MQ=60)
GGCAAGCGACGAGGATCCTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGCTTTTCCAGCGCCA < SRR4302547.5418719/94‑1 (MQ=60)
gaagaGACGAGGATCCTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGATGTTTTTCCAGCGCCATT < SRR4302547.5196493/89‑1 (MQ=60)
CAAGCGACGAGGATCCTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTCTCCAGCGCCATT > SRR4302547.3247818/1‑94 (MQ=60)
AAGCGACGAGGATCCTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTT > SRR4302547.5567643/1‑94 (MQ=60)
AAGCGACGAGGATCCTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTT > SRR4302547.6265357/1‑94 (MQ=60)
AAGCGACGAGGATCCTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGATGTTTTTCCAGCGCCATTT < SRR4302547.1300805/94‑1 (MQ=60)
GGACGAGGATCCTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCT < SRR4302547.1142714/94‑1 (MQ=60)
GACGAGGATCCTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTT > SRR4302547.853902/1‑94 (MQ=60)
GACGAGGATCCTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTT > SRR4302547.1941851/1‑94 (MQ=60)
GACGAGGATCCTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTT > SRR4302547.1673598/1‑94 (MQ=60)
ACGAGGATCCTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTT > SRR4302547.4085683/1‑94 (MQ=60)
ACGAGGATCCTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTT < SRR4302547.2967179/94‑1 (MQ=60)
ACGAGGATCCTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTT > SRR4302547.4591371/1‑94 (MQ=60)
ACGAGGATCCTATTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTT > SRR4302547.4146215/1‑94 (MQ=60)
CGAGGATCCTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTT > SRR4302547.5989986/1‑94 (MQ=60)
CGAGGATCCTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGATGTTTTTCCAGCGCCATTTTCTTTT < SRR4302547.4096850/94‑1 (MQ=60)
GAGGATCCTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTG > SRR4302547.4518494/1‑94 (MQ=60)
GAGGATCCTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTG > SRR4302547.3236345/1‑94 (MQ=60)
TGGATCCTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGC > SRR4302547.1340925/1‑94 (MQ=60)
ATCCTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGC > SRR4302547.1231139/1‑94 (MQ=60)
CTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAG > SRR4302547.5403200/1‑94 (MQ=60)
CTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAG > SRR4302547.6770678/1‑94 (MQ=60)
CTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAG > SRR4302547.2945645/1‑94 (MQ=60)
CTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGATGTTTTTCCAGCGCCATTTTCTTTTGCCGCCTG < SRR4302547.1819732/94‑1 (MQ=60)
CTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGATGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAG < SRR4302547.3407264/94‑1 (MQ=60)
CTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGGCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAG > SRR4302547.2744644/1‑94 (MQ=60)
CTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTCGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAC > SRR4302547.4182877/1‑94 (MQ=60)
CTGTTCGTTGGAGCTGCTGCCGTGGAGTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGCGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAG > SRR4302547.1675374/1‑94 (MQ=60)
CGGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAG < SRR4302547.3325949/94‑1 (MQ=60)
TTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCG < SRR4302547.4548094/94‑1 (MQ=60)
TTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCG < SRR4302547.2522485/94‑1 (MQ=60)
TCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGG < SRR4302547.1247773/94‑1 (MQ=60)
TCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGG < SRR4302547.3694826/94‑1 (MQ=60)
TCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGATGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGG < SRR4302547.5347596/94‑1 (MQ=60)
GTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTG > SRR4302547.3813602/1‑94 (MQ=60)
GTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGATGTTTTTCCAGGGCCATTTTCTTTTGCCGCCAGCCGGTG < SRR4302547.645249/94‑1 (MQ=60)
TTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGA > SRR4302547.664725/1‑94 (MQ=60)
TTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTCCTTTTGCCGCCAGCCGGTGA < SRR4302547.6550433/94‑1 (MQ=60)
TGGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGA < SRR4302547.4363241/94‑1 (MQ=60)
GGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGC > SRR4302547.2080277/1‑94 (MQ=60)
AGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGC > SRR4302547.5363584/1‑94 (MQ=60)
AGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGATGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGC < SRR4302547.2357974/94‑1 (MQ=60)
CTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCT > SRR4302547.718104/1‑94 (MQ=60)
CTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCT > SRR4302547.2039144/1‑94 (MQ=60)
CTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCT < SRR4302547.1402155/94‑1 (MQ=60)
TGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTC > SRR4302547.3740421/1‑94 (MQ=60)
TGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTC > SRR4302547.5955139/1‑94 (MQ=60)
GCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCT > SRR4302547.3516545/1‑94 (MQ=60)
GCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCT < SRR4302547.461689/94‑1 (MQ=60)
GCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCT < SRR4302547.2663760/94‑1 (MQ=60)
GCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCT < SRR4302547.5239244/94‑1 (MQ=60)
GCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCT < SRR4302547.5239245/94‑1 (MQ=60)
TGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTC > SRR4302547.5561849/1‑94 (MQ=60)
TGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTC < SRR4302547.6287230/94‑1 (MQ=60)
TGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTC < SRR4302547.271443/94‑1 (MQ=60)
TGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTC > SRR4302547.234434/1‑94 (MQ=60)
TGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTC < SRR4302547.2332999/94‑1 (MQ=60)
GCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCA > SRR4302547.4649299/1‑94 (MQ=60)
GCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCA > SRR4302547.2840216/1‑94 (MQ=60)
CCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAA > SRR4302547.775590/1‑94 (MQ=60)
CGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAA < SRR4302547.1974777/94‑1 (MQ=60)
GTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAG > SRR4302547.6064476/1‑94 (MQ=60)
GTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAG > SRR4302547.3251893/1‑94 (MQ=60)
GTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAG < SRR4302547.6349403/94‑1 (MQ=60)
TGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGATGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGC > SRR4302547.1774699/1‑94 (MQ=60)
GGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCG < SRR4302547.3431057/94‑1 (MQ=60)
GATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGG < SRR4302547.416502/94‑1 (MQ=60)
GATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGG > SRR4302547.6227734/1‑94 (MQ=60)
GATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGG < SRR4302547.3498729/94‑1 (MQ=60)
GATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGATGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGG > SRR4302547.2891440/1‑94 (MQ=60)
attggttgagCAAGCTCGGCCTGGTCATAATACTGATGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGG < SRR4302547.1353815/84‑1 (MQ=60)
ATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCATCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGG > SRR4302547.6320363/1‑94 (MQ=60)
ATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGG < SRR4302547.4314205/94‑1 (MQ=60)
ATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGG < SRR4302547.4675495/94‑1 (MQ=60)
ATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGG < SRR4302547.148422/94‑1 (MQ=60)
TAGCTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAA < SRR4302547.551847/94‑1 (MQ=60)
AGCTGATCAAGATCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAG > SRR4302547.4143236/1‑94 (MQ=60)
CTGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAGCC < SRR4302547.3751114/94‑1 (MQ=60)
CTGATCAAGCTCGGCCTGGTCATAATACTGGTGATTTTCCAGCGCCATTTTCTTTTCCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAGCC > SRR4302547.5425159/1‑94 (MQ=60)
TGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAGCCT < SRR4302547.5955745/94‑1 (MQ=60)
TGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAGCCT < SRR4302547.3369037/94‑1 (MQ=60)
TGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAGCCT > SRR4302547.47765/1‑94 (MQ=60)
TGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAGCCT < SRR4302547.2773573/94‑1 (MQ=60)
TGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAGCCT > SRR4302547.1923312/1‑94 (MQ=60)
TGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAGCCT < SRR4302547.1806511/94‑1 (MQ=60)
TGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAGCCT < SRR4302547.1741663/94‑1 (MQ=60)
TGATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAGCCT < SRR4302547.845226/94‑1 (MQ=60)
GATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAGCCTG > SRR4302547.6114579/1‑94 (MQ=60)
ATCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAGCCTGG < SRR4302547.4735785/94‑1 (MQ=60)
TCAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAGCCTGGA < SRR4302547.1068652/94‑1 (MQ=60)
CAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAGCCTGGAA < SRR4302547.1390575/94‑1 (MQ=60)
CAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAGCCTGGAA > SRR4302547.4493902/1‑94 (MQ=60)
CAAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAGCCTGGAA > SRR4302547.6008758/1‑94 (MQ=60)
AAGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAGCCTGGAAG < SRR4302547.5332286/94‑1 (MQ=60)
AAGCTCGGCCTGGTCATAATACTGATGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAGCCTGGAAG > SRR4302547.2955344/1‑94 (MQ=60)
AGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAGCCTGGAAGG < SRR4302547.5284239/94‑1 (MQ=60)
AGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAGCCTGGAAGG > SRR4302547.1774885/1‑94 (MQ=60)
AGCTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAGCCTGGAAGG > SRR4302547.5195617/1‑94 (MQ=60)
CTCGGCCTGGTCATAATACTGGTGTTTTTCCAGCG‑CATTTTTTTTTGGCGCCAAGCCGTGAGCGCCTCTTCAAAacggggaggccgggaggggt > SRR4302547.5050075/1‑74 (MQ=34)
TCGGCCTGGTCATAATACTGATGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAGCCTGGAAGGGTT > SRR4302547.6470684/1‑94 (MQ=60)
CGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAGCCTGGAAGGGTTT < SRR4302547.1664150/94‑1 (MQ=60)
CGGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAGCCTGGAAGGGTTT < SRR4302547.6308515/94‑1 (MQ=60)
GGCCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAGCCTGGAAGGGTTTG < SRR4302547.3864286/94‑1 (MQ=60)
GGCCTGGTCATAATACTGGGGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAGCCTGGAAGGGTTTG > SRR4302547.3418513/1‑94 (MQ=60)
CCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAGCCTGGAAGGGTTTGAT > SRR4302547.1623578/1‑94 (MQ=60)
CCTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAGCCTGGAAGGGTTTGAT < SRR4302547.4741854/94‑1 (MQ=60)
CTGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAGCCTGGAAGGGTTTGATC > SRR4302547.2766555/1‑94 (MQ=60)
TGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAGCCTGGAAGGGTTTGATCA > SRR4302547.4973062/1‑94 (MQ=60)
TGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAGCCTGGAAGGGTTTGATCA < SRR4302547.1417000/94‑1 (MQ=60)
TGGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAGCCTGGAAGGGTTTGATCA < SRR4302547.5952437/94‑1 (MQ=60)
GGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGGGCGCCTCTTCAAAGCGGGAAGCCTGGAAGGGTTTGATCAG < SRR4302547.5845240/94‑1 (MQ=60)
GGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAGCCTGGAAGGGTTTGATCAG > SRR4302547.2039778/1‑94 (MQ=60)
GGTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAGCCTGGAAGGGTTTGATCAG > SRR4302547.4138846/1‑94 (MQ=60)
GTCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAGCCTGGAAGGGTTTGATCAGG > SRR4302547.4877915/1‑94 (MQ=60)
TCATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAGCCTGGAAGGGTTTGATCAGGT > SRR4302547.875969/1‑94 (MQ=60)
CATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAGCCTGGAAGGGTTTGATCAGGTA < SRR4302547.2091563/94‑1 (MQ=60)
CATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAGCCTGGAAGGGTTTGATCAGGTA > SRR4302547.456088/1‑94 (MQ=60)
ATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAGCCTGGAAGGGTTTGATCAGGTAA < SRR4302547.877794/94‑1 (MQ=60)
ATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAGCCTGGAAGGGTTTGATCAGGTAA > SRR4302547.2266294/1‑94 (MQ=60)
ATAATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAGCCTGGAAGGGTTTGATCAGGTAA > SRR4302547.3685204/1‑94 (MQ=60)
AATACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAGCCTGGAAGGGTTTGATCAGGTAATC > SRR4302547.1361258/1‑94 (MQ=60)
AATACTGATGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAGCCTGGAAGGGTTTGATCAGGTAATC < SRR4302547.2504748/94‑1 (MQ=60)
TACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAGCCTGGAAGGGTTTGATCAGGTAATCCA < SRR4302547.1885207/94‑1 (MQ=60)
ACTGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAGCCTGGAAGGGTTTGATCAGGTAATCCAC < SRR4302547.3240872/94‑1 (MQ=60)
TGGTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAGCCTGGAAGGGTTTGATCAGGTAATCCACGA < SRR4302547.4228623/94‑1 (MQ=60)
GTGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAGCCTGGAAGGGTTTGATCAGGTAATCCACGACA < SRR4302547.1500129/94‑1 (MQ=60)
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CGGCGTTAAGCCTTTTGGCAAGCGACGAGGATCCTGTTCGTTGGAGCTGCTGCCGTGGATTAGCTGATCAAGCTCGGCCTGGTCATAATACTGATGTTTTTCCAGCGCCATTTTCTTTTGCCGCCAGCCGGTGAGCGCCTCTTCAAAGCGGGAAGCCTGGAAGGGTTTGATCAGGTAATCCACGACA > NC_000913/4347130‑4347316
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
