Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
593 |
264.2 |
13311096 |
97.8% |
13018251 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,463,185 |
A→G |
G190G (GGT→GGC) |
treB ← |
PTS trehalose‑specific system enzyme IIBC |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,463,185 | 0 | A | G | 85.7%
| 713.4
/ 99.4
| 272 | G190G (GGT→GGC) | treB | PTS trehalose‑specific system enzyme IIBC |
| Reads supporting (aligned to +/- strand): ref base A (21/18); new base G (100/133); total (121/151) |
| Fisher's exact test for biased strand distribution p-value = 2.26e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.95e-01 |
Only 100 of 275 total aligned reads displayed.
ATGCCAAAGTCCCACACTTCCGGCAGCTGCTGCCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATACCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGACCGGCAGGTAGAAGAAGATCGCTTCACCGATCAACCA > NC_000913/4463096‑4463274
|
aTGCCAAAGTCCCACACTTCCGGCAGCTGCTGCCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCa < 2:1035773/93‑1 (MQ=255)
tGCCAAAGTCCCACACTTCCGGTAGCTGCTGCCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCaa < 1:350921/93‑1 (MQ=255)
tGCCAAAGTCCCACACTTCCGGCAGCTGCTGCCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCaa > 2:4348909/1‑93 (MQ=255)
tGCCAAAGTCCCACACTTCCGGCAGCTGCTGCCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCaa > 2:3872330/1‑93 (MQ=255)
gCCAAAGTCCCACACTTCCGGCAGCTGCTGCCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAg < 2:5410769/93‑1 (MQ=255)
gCCAAAGTCCCACACTTCCGGCAGCTGCTGCCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAg > 1:3870521/1‑93 (MQ=255)
gCCAAAGTCCCACACTTCCGGCAGCTGCTGCCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAg < 2:1116083/93‑1 (MQ=255)
gCCAAAGTCCCACACTTCCGGCAGCTGCTGCCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATACCAAg < 2:647797/93‑1 (MQ=255)
ccAAAGTCCCACACTTCCGGCAGCTGCTGCCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAgg > 1:2130109/1‑93 (MQ=255)
ccAAAGTCCCACACTTCCGGCAGCTGCTGCCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAgg < 1:4741192/93‑1 (MQ=255)
cAAAGTCCCACACTTCCGGCAGCTGCTGCCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGa > 1:85245/1‑93 (MQ=255)
aaaGTCCCACACTTCCGGCAGCTGCTGCCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGAt < 1:4453121/93‑1 (MQ=255)
aaGTCCCACACTTCCGGCAGCTGCTGCCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATc < 2:5185386/93‑1 (MQ=255)
aaGTCCCACACTTCCGGCAGCTGCTGCCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATc > 1:4254606/1‑93 (MQ=255)
aaGTCCCACACTTCCGGCAGCTGCTGCCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATc > 2:5546415/1‑93 (MQ=255)
ctCCCACACTTCCGGCAGCTGCTGCCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCgg < 1:194737/92‑1 (MQ=255)
tCCCACACTTCCGGCAGCTGCTGCCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGc < 1:6456633/93‑1 (MQ=255)
cccACACTTCCGGCAGCTGCTGCCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCg < 1:2887413/93‑1 (MQ=255)
ccACACTTCCGGCAGCTGCTGCCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATACCAAGGATCGGCGt > 1:746603/1‑93 (MQ=255)
ccACACGTCCGGCAGCTGCTGCCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGt < 2:1423601/93‑1 (MQ=255)
acacTTCCGGCAGCTGCTGCCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTgc > 2:5926852/1‑93 (MQ=255)
cacTTCCGGCAGCTGCTGCCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTgcc < 1:6347343/93‑1 (MQ=255)
acTTCCGGCAGCTGCTGCCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTgccg < 2:463586/93‑1 (MQ=255)
ttCCGGCAGCTGCTGCCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTgccgcc < 1:3604101/93‑1 (MQ=255)
ccGGTAGCTGCTGCCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCa < 2:3506118/93‑1 (MQ=255)
cGGTAGCTGCTGCCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCAt > 2:3289044/1‑93 (MQ=255)
cGGCAGCTGCTGCCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCAt < 1:2652934/93‑1 (MQ=255)
cGGCAGCTGCTGCCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCAt < 1:2002163/93‑1 (MQ=255)
cGGCAGCTGCTGCCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCAt < 2:1006759/93‑1 (MQ=255)
ggCAGCTGCTGCCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCAtt < 2:2913317/93‑1 (MQ=255)
gCAGCTGCTGCCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCAttt > 2:2354099/1‑93 (MQ=255)
cAGCTGCTGCCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCAtttt < 2:2005071/93‑1 (MQ=255)
aGCTGCTGCCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCAttttt > 2:4167530/1‑93 (MQ=255)
gctgctGCCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCAtttttt > 2:1823497/1‑93 (MQ=255)
gctgctGCCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCAtttttt < 2:6166749/93‑1 (MQ=255)
gctgctGCCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATACCAAGGATCGGCGTGCCGCCCAtttttt < 2:3035349/93‑1 (MQ=255)
gctgcCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATACCAAGGATCGGCGTGCCGCCCATTTTTTTCa > 1:3551199/1‑93 (MQ=255)
ctgcCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCAc > 2:426992/1‑93 (MQ=255)
cccGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGc < 2:589417/93‑1 (MQ=255)
cGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTg > 2:3066205/1‑93 (MQ=255)
cGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTg < 1:1131832/93‑1 (MQ=255)
cGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTg < 1:125392/93‑1 (MQ=255)
cGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTg < 1:5474688/93‑1 (MQ=255)
gAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGa > 1:3435309/1‑93 (MQ=255)
gCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGAcc < 2:451626/93‑1 (MQ=255)
gCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGAcc < 2:2440581/93‑1 (MQ=255)
gCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGAcc < 2:5152912/93‑1 (MQ=255)
gCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGAcc > 2:4006862/1‑93 (MQ=255)
aGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAg > 1:3093002/1‑93 (MQ=255)
gATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGc < 1:5736442/93‑1 (MQ=255)
gATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGc > 1:479151/1‑93 (MQ=255)
tAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATACCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCaa > 1:4903427/1‑93 (MQ=255)
aaGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCaaa < 1:3212379/93‑1 (MQ=255)
aGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAAt < 1:5796776/93‑1 (MQ=255)
aGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAAt > 1:4324890/1‑93 (MQ=255)
cGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATac > 2:5653497/1‑93 (MQ=255)
gTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATacc > 1:613905/1‑93 (MQ=255)
gTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACACCTGACCAGCAAAAacc > 2:3707896/1‑93 (MQ=255)
ttCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATaccg > 1:40277/1‑93 (MQ=255)
tcatcaGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATaccga > 2:699488/1‑93 (MQ=255)
tatcaGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATaccgac < 2:5501894/92‑1 (MQ=255)
catcaGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATaccgac > 2:3171920/1‑93 (MQ=255)
catcaGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATaccgac < 2:173378/93‑1 (MQ=255)
catcaGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATaccgac < 2:265791/93‑1 (MQ=255)
catcaGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATaccgac < 1:5382170/93‑1 (MQ=255)
atcaGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATaccgacc < 2:6510676/93‑1 (MQ=255)
atcaGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATaccgacc > 1:1552698/1‑93 (MQ=255)
gCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGACCGGCa > 2:857022/1‑93 (MQ=255)
tgtgGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGACCGGCAgg > 1:5887711/1‑93 (MQ=255)
gtgGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGACCGGCAGGt < 1:4067019/93‑1 (MQ=255)
gtgGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGACCGGCAGGt < 2:2513821/93‑1 (MQ=255)
gagaAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGACCGGCAGGTaga < 2:3865833/93‑1 (MQ=255)
agaAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGACCGGCAGGTagaa < 2:3392835/93‑1 (MQ=255)
agaAACCAGTGTCACGCCAAGCACGATACCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGACCGGCAGGTagaa < 1:1463986/93‑1 (MQ=255)
gaAACCAGTGTCACGCCAAGCACGATACCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGACCGGCAGGTagaag > 1:3026207/1‑93 (MQ=255)
aaaCCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGACCGGCAGGTagaaga < 2:5608566/93‑1 (MQ=255)
aaaCCAGTGTCACGCCAAGCACGATACCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGACCGGCAGGTagaaga < 1:1196750/93‑1 (MQ=255)
aaCCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGACCGGCAGGTagaagaa < 1:253622/93‑1 (MQ=255)
aCCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGACCGGCAGGTagaagaaa > 1:1767010/1‑92 (MQ=255)
aCCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGACCGGCAGGGagaagaag > 2:156346/1‑93 (MQ=255)
ccAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGACCGGCAGGTagaagaaga < 1:2439273/93‑1 (MQ=255)
ccAGTGTCACGCCAAGCACGATACCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGACCGGCAGGTagaagaaga > 2:4491805/1‑93 (MQ=255)
cAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGACCGGCAGGTAGAAGAAGAt < 2:3219430/93‑1 (MQ=255)
cAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGACCGGCAGGTAGAAGAAGAt < 2:6470158/93‑1 (MQ=255)
gtCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGACCGGCAGGTAGAAGAAGATCGCt < 1:231744/93‑1 (MQ=255)
tCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGACCGGCAGGTAGAAGAAGATCGCtt < 2:1644147/93‑1 (MQ=255)
tCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGACCGGCAGGTAGAAGAAGATCGCtt < 1:1423493/93‑1 (MQ=255)
cACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGACCGGCAGGTAGAAGAAGATCGCTTc < 2:2428465/93‑1 (MQ=255)
ccAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGACCGGCAGGTAGAAGAAGATCGCTTCACCg > 2:4407351/1‑93 (MQ=255)
ccAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGACCGGCAGGTAGAAGAAGATCGCTTCACCg < 2:2134821/93‑1 (MQ=255)
ccAAGCACGATACCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGACCGGCAGGTAGAAGAAGATCGCTTCACCg > 2:6612762/1‑93 (MQ=255)
aGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGACCGGCAGGTAGAAGAAGATCGCTTCACCGATc < 1:1054349/93‑1 (MQ=255)
aGCACGATGCCAAGGATCGGAGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGACCGGCAGGTAGAAGAAGATCGCTTCACCGATc > 2:6372467/1‑93 (MQ=255)
aGCACGATACCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGACCGGCAGGTAGAAGAAGATCGCTTCACCGATc < 2:750868/93‑1 (MQ=255)
cACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGACCGGCAGGTAGAAGAAGATCGCTTCACCGATCaa < 2:934724/93‑1 (MQ=255)
aCGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGACCGGCAGGTAGAAGAAGATCGCTTCACCGATCAAc < 2:2325961/93‑1 (MQ=255)
cGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGACCGGCAGGTAGAAGAGGATCGCTTCACCGATCAAcc < 1:3708126/93‑1 (MQ=255)
cGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGACCGGCAGGTAGAAGAAGATCGCTTCACCGATCAAcc < 1:5067303/93‑1 (MQ=255)
cGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGACCGGCAGGTAGAAGAAGATCGCTTCACCGATCAAcc > 2:3009964/1‑93 (MQ=255)
gATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGACCGGCAGGTAGAAGAAGATCGCTTCACCGATCAACca < 2:5952364/93‑1 (MQ=255)
|
ATGCCAAAGTCCCACACTTCCGGCAGCTGCTGCCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATACCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGACCGGCAGGTAGAAGAAGATCGCTTCACCGATCAACCA > NC_000913/4463096‑4463274
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AACATGCCAAAGTCCCACACTTCCGGCAGCTGCTGCCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATACCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGACCGGCAGGTAGAAGAAGATCGCTTCACCGATCAACCACAGA > NC_000913/4463093‑4463278
|
AACATGCCAAAGTCCCACACTTCCGGCAGCTGCTGCCCGAGCAGATAAGCGTTCATCAGCTGTGGAGGAACCAGTGTCGCGCCCAGCACGATGC > SRR4302547.1364765/1‑94 (MQ=60)
CATGCCAAAGTCCCACACTTCCGGCAGCTGCTGCCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCA > SRR4302547.2807615/1‑94 (MQ=60)
CATGCCAAAGTCCCACACTTCCGGCAGCTGCTGCCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATACCA > SRR4302547.4246734/1‑94 (MQ=60)
ATGCCAAAGTCCCACACTTCCGGCAGCTGCTGCCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAA > SRR4302547.3537733/1‑94 (MQ=60)
ATGCCAAAGTCCCACACTTCCGGCAGCTGCTGCCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAA > SRR4302547.3172731/1‑94 (MQ=60)
TGCCAAAGTCCCACACTTCCGGTAGCTGCTGCCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAG < SRR4302547.357437/94‑1 (MQ=60)
TGCCAAAGTCCCACACTTCCGGCAGCTGCTGCCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAG < SRR4302547.6480916/94‑1 (MQ=60)
TGCCAAAGTCCCACACTTCCGGCAGCTGCTGCCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAG > SRR4302547.3949308/1‑94 (MQ=60)
GCCAAAGTCCCACACTTCCGGCAGCTGCTGCCCGAGCAGATAAGGGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGG < SRR4302547.2908857/94‑1 (MQ=60)
GCCAAAGTCCCACACTTCCGGCAGCTGCTGCCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGG > SRR4302547.2172552/1‑94 (MQ=60)
CCAAAGTCCCACACTTCCGGCAGCTGCTGCCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGA < SRR4302547.4839451/94‑1 (MQ=60)
CCAAAGTCCCACACTTCCGGCAGCTGCTGCCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGA > SRR4302547.86821/1‑94 (MQ=60)
CAAAGTCCCACACTTCCGGCAGCTGCTGCCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGAT > SRR4302547.5869696/1‑94 (MQ=60)
CAAAGTCCCACACTTCCGGCAGCTGCTGCCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGAT > SRR4302547.1435994/1‑94 (MQ=60)
CAAAGTCCCACACTTCCGGCAGCTGCTGCCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATACCAAGGAT < SRR4302547.4761754/94‑1 (MQ=60)
AAAGTCCCACACTTCCGGCAGCTGCTGCCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATC < SRR4302547.6217305/94‑1 (MQ=60)
AAAGTCCCACACTTCCGGCAGCTGCTGCCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATC < SRR4302547.4545170/94‑1 (MQ=60)
AAAGTCCCACACTTCCGGCAGCTGCTGCCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATC > SRR4302547.4341662/1‑94 (MQ=60)
GTCCCACACTTCCGGCAGCTGCTGCCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGC < SRR4302547.4376826/94‑1 (MQ=60)
GTCCCACACTTCCGGCAGCTGCTGCCCGAGCAGAT‑AGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCG < SRR4302547.5565767/94‑1 (MQ=60)
CTCCCACACTTCCGGCAGCTGCTGCCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGC < SRR4302547.198377/94‑1 (MQ=60)
TCCCACACTTCCGGCAGCTGCTGCCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCG < SRR4302547.6591113/94‑1 (MQ=60)
TCCCACACTTCCGGCAGCTGCTGCCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATACCAAGGATCGGCG < SRR4302547.328753/94‑1 (MQ=60)
TCCCACACTTCCGGCAGCTGCTGCCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGAACGATGCCAAGGATCGGCG > SRR4302547.3439424/1‑94 (MQ=60)
CCCACACTTCCGGCAGCTGCTGCCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGT < SRR4302547.2945024/94‑1 (MQ=60)
CCCACACTTCCGGCAGCTGCTGCCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATACCAAGGATCGGCGT > SRR4302547.760667/1‑94 (MQ=60)
CCACACTTCCGGCAGCTGCTGCCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATACCAAGGATCGGCGCG > SRR4302547.4832772/1‑94 (MQ=60)
CACTTCCGGCAGCTGCTGCCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCG < SRR4302547.6479577/94‑1 (MQ=60)
CTTCCGGCAGCTGCTGCCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCC > SRR4302547.2111371/1‑94 (MQ=60)
TTCCGGCAGCTGCTGCCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCC < SRR4302547.3677598/94‑1 (MQ=60)
CGGCAGCTGCTGCCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATT < SRR4302547.4198468/94‑1 (MQ=60)
CGGCAGCTGCTGCCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATT < SRR4302547.2706267/94‑1 (MQ=60)
CGGCAGCTGCTGCCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATT < SRR4302547.2042001/94‑1 (MQ=60)
CGGCAGCTGCTGCCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATT > SRR4302547.6006816/1‑94 (MQ=60)
CGGCAGCTGCTGCCCGAGCAAATAAGCGATCATCAGCTGTGGCGGAACCAGTGTCACGCCAAGCACGATACCAAGGATCGcagcacccgctctt > SRR4302547.199651/1‑80 (MQ=60)
CAGCTGCTGCCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTT < SRR4302547.2978961/94‑1 (MQ=60)
CAGCTGCTGCCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATACCAAGGATCGGCGTGCCGCCCATTTTT > SRR4302547.1941629/1‑94 (MQ=60)
CAGCTGCTGCCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATACCAAGGATCGGCGTGCCGCCCATTTTT < SRR4302547.2642589/94‑1 (MQ=60)
AGCTGCTGCCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTT > SRR4302547.1103299/1‑94 (MQ=60)
AGCTGCTGCCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTT > SRR4302547.2439922/1‑94 (MQ=60)
GCTGCTGCCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTT < SRR4302547.3798201/94‑1 (MQ=60)
TGCTGCCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCA > SRR4302547.3664172/1‑94 (MQ=60)
TGCTGCCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATACCAAGGATCGGCGTGCCGCCCATTTTTTTCA > SRR4302547.3623679/1‑94 (MQ=60)
CTGCCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACC < SRR4302547.6440757/94‑1 (MQ=60)
TGCCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCG > SRR4302547.2488087/1‑94 (MQ=60)
TGCCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATACCAAGGATCGGCGTGCCGCCCATTTTTTTCACCG > SRR4302547.2534448/1‑94 (MQ=60)
CCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTG > SRR4302547.1229165/1‑94 (MQ=60)
GGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGA > SRR4302547.3505343/1‑94 (MQ=60)
CGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGC > SRR4302547.3716991/1‑94 (MQ=60)
CGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGA < SRR4302547.5587773/94‑1 (MQ=60)
CGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGA < SRR4302547.127669/94‑1 (MQ=60)
CGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGA < SRR4302547.2725327/94‑1 (MQ=60)
CGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGA < SRR4302547.1154674/94‑1 (MQ=60)
CGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATACCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGA > SRR4302547.1657192/1‑94 (MQ=60)
GAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGAC > SRR4302547.5078228/1‑94 (MQ=60)
GAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGAC > SRR4302547.1291460/1‑94 (MQ=60)
AGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACC > SRR4302547.1258152/1‑94 (MQ=60)
AGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATACCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACC < SRR4302547.5597229/94‑1 (MQ=60)
GCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCA < SRR4302547.6058384/94‑1 (MQ=60)
CAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAG > SRR4302547.3154319/1‑94 (MQ=60)
CAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATACCAAGGATCGGCGTGCCGCCCATTTTTTTCTTCGCTGATCAG > SRR4302547.5736636/1‑94 (MQ=60)
AGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGC > SRR4302547.978355/1‑94 (MQ=60)
AGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGC > SRR4302547.487948/1‑94 (MQ=60)
AGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGC > SRR4302547.2643523/1‑94 (MQ=60)
GATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCA < SRR4302547.5854960/94‑1 (MQ=60)
ATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATACCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAA > SRR4302547.5004970/1‑94 (MQ=60)
AAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAAT < SRR4302547.4855507/94‑1 (MQ=60)
AAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAAT < SRR4302547.1165188/94‑1 (MQ=60)
AAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAAT < SRR4302547.3276457/94‑1 (MQ=60)
AAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAAT > SRR4302547.4413915/1‑94 (MQ=60)
AAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAAT < SRR4302547.4975306/94‑1 (MQ=60)
AAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATACCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAAT > SRR4302547.3702983/1‑94 (MQ=60)
AGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATA < SRR4302547.5916682/94‑1 (MQ=60)
GCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATACCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATAC < SRR4302547.662589/94‑1 (MQ=60)
CGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACC > SRR4302547.625278/1‑94 (MQ=60)
GTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCG < SRR4302547.993319/94‑1 (MQ=60)
GTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCG > SRR4302547.41020/1‑94 (MQ=60)
GTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCG < SRR4302547.6347139/94‑1 (MQ=60)
TCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGAC > SRR4302547.1169285/1‑94 (MQ=60)
TCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGAC > SRR4302547.3898112/1‑94 (MQ=60)
CATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGACC < SRR4302547.5493293/94‑1 (MQ=60)
CATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGACC > SRR4302547.1583601/1‑94 (MQ=60)
ATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGACCG < SRR4302547.5278821/94‑1 (MQ=60)
TCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGACCGG < SRR4302547.4132401/94‑1 (MQ=60)
CAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGACCGGC < SRR4302547.2347917/94‑1 (MQ=60)
CAGCTGGGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGACCGGC < SRR4302547.773694/94‑1 (MQ=60)
AGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGACCGGCA < SRR4302547.1472407/94‑1 (MQ=60)
AGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGACCGGCA < SRR4302547.5507159/94‑1 (MQ=60)
GCTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGACCGGCAG > SRR4302547.2059532/1‑94 (MQ=60)
CTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCCTTTTTTTCCCTGCTGACCAGCACATACCCACCGGCAGG > SRR4302547.3591984/1‑94 (MQ=60)
CTGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGACCGGCAGG > SRR4302547.6009599/1‑94 (MQ=60)
TGTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGACCGGCAGGT > SRR4302547.3169437/1‑94 (MQ=60)
GTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGACCGGCAGGTA < SRR4302547.2200518/94‑1 (MQ=60)
GTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGACCGGCAGGTA < SRR4302547.4149629/94‑1 (MQ=60)
GTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGACCGGCAGGGA > SRR4302547.5779052/1‑94 (MQ=60)
GTGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGACCGGCAGGGA > SRR4302547.412663/1‑94 (MQ=60)
TGGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGACCGGCAGGTAG < SRR4302547.5215050/94‑1 (MQ=60)
GGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGACCGGCAGGTAGA < SRR4302547.4530269/94‑1 (MQ=60)
GGAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGACCGGCAGGTAGA < SRR4302547.4952534/94‑1 (MQ=60)
GAGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGACCGGCAGGTAGAA < SRR4302547.4045849/94‑1 (MQ=60)
AGAAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGACCGGCAGGTAGAAG < SRR4302547.4399918/94‑1 (MQ=60)
AGAAACCAGTGTCACGCCAAGCACGATACCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGACCGGCAGGTAGAAG > SRR4302547.3086381/1‑94 (MQ=60)
AGAAACCAGTGTCACGCCAAGCACGATACCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGACCGGCAGGTAGAAG < SRR4302547.1493233/94‑1 (MQ=60)
AAACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGACCGGCAGGTAGAAGAA > SRR4302547.3513985/1‑94 (MQ=60)
AAACCAGTGTCACGCCAAGCACGATACCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGACCGGCAGGTAGAAGAA < SRR4302547.1220899/94‑1 (MQ=60)
AACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATAGCGACCGGCAGCTAGAAGAAG < SRR4302547.6636803/94‑1 (MQ=60)
AACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGACCGGCAGGTAGAAGAAG < SRR4302547.258364/94‑1 (MQ=60)
AACCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGACCGGCAGGTAGAAGAAA > SRR4302547.1802061/1‑94 (MQ=60)
CCAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGACCGGCAGGTAGAAGAAGAT < SRR4302547.2488607/94‑1 (MQ=60)
CAGTGTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGACCGGCAGGTAGAAGAAGATC < SRR4302547.365983/94‑1 (MQ=60)
GTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGACCGGCAGGTAGAAGAAGATCGCTT < SRR4302547.2980513/94‑1 (MQ=60)
GTCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGACCGGCAGGTAGAAGAAGATCGCTT < SRR4302547.236104/94‑1 (MQ=60)
TCACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGACCGGCAGGTAGAAGAAGATCGCTTC < SRR4302547.1451992/94‑1 (MQ=60)
CACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGACCGGCAGGTAGAAGAAGATCGCTTCA > SRR4302547.836361/1‑94 (MQ=60)
ACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCCGGAAAGACCGACCGGCAGGGAGAAGAAAATCTCTCCAC > SRR4302547.6136352/1‑94 (MQ=60)
ACGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGACCGGCAGGTAGAAGAAGATCGCTTCAC < SRR4302547.1553138/94‑1 (MQ=60)
CGCCAAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGACCGGCAGGTAGAAGAAGATCGCTTCACC < SRR4302547.5969368/94‑1 (MQ=60)
AAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGACCGGCAGGTAGAAGAAGATCGCTTCACCGATC > SRR4302547.1732368/1‑94 (MQ=60)
AAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGACCGGCAGGTAGAAGAAGATCGCTTCACCGATA > SRR4302547.1988695/1‑94 (MQ=60)
AAGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGACCGGCAGGGAGAAGAAGATCGCTTCACCGATC > SRR4302547.4873497/1‑94 (MQ=60)
AGCACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGACCGGCAGGTAGAAGAAGATCGCTTCACCGATCA < SRR4302547.1075303/94‑1 (MQ=60)
CACGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGACCGGCAGGTAGAAGAAGATCGCTTCACCGATCAAA < SRR4302547.3130298/94‑1 (MQ=60)
CGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGACCGGCAGGTAGAAGAGGATCGCTTCACCGATCAACCA < SRR4302547.3783823/94‑1 (MQ=60)
CGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGACCGGCAGGTAGAAGAAGATCGCTTCACCGATCAACCA < SRR4302547.1508944/94‑1 (MQ=60)
CGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGACCGGCAGGTAGAAGAAGATCGCTTCACCGATCAACCA < SRR4302547.1904873/94‑1 (MQ=60)
CGATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGACCGGCAGGTAGAAGAAGATCGCTTCACCGATCAACCA < SRR4302547.5171858/94‑1 (MQ=60)
ATGCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGACCGGCAGGTAGAAGAAGATCGCTTCACCGATCAACCACA < SRR4302547.4054376/94‑1 (MQ=60)
GCCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGACCGGCAGGTAGAAGAAGATCGCTTCACCGATCAACCACAGA < SRR4302547.3623403/94‑1 (MQ=60)
|
AACATGCCAAAGTCCCACACTTCCGGCAGCTGCTGCCCGAGCAGATAAGCGTTCATCAGCTGTGGAGAAACCAGTGTCACGCCAAGCACGATACCAAGGATCGGCGTGCCGCCCATTTTTTTCACCGCTGACCAGCAAATACCGACCGGCAGGTAGAAGAAGATCGCTTCACCGATCAACCACAGA > NC_000913/4463093‑4463278
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 5 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
