Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
593 |
264.2 |
13311096 |
97.8% |
13018251 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,522,123 |
A→G |
R152R (CGT→CGC) |
b4298 ← |
putative lyase/synthase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,522,123 | 0 | A | G | 84.3%
| 699.4
/ 120.0
| 286 | R152R (CGT→CGC) | b4298 | putative lyase/synthase |
| Reads supporting (aligned to +/- strand): ref base A (24/21); new base G (131/110); total (155/131) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.62e-01 |
Only 100 of 293 total aligned reads displayed.
CCGACTTAACTGTGTTGATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCGATCTGCT > NC_000913/4522032‑4522214
|
ccGACTTAACTGTGTTGATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGAc < 1:5942119/93‑1 (MQ=255)
cGACTTAACTGTGTTGATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGTGCCAGGcg < 1:6478900/93‑1 (MQ=255)
cGACTTAACTGTGTTGATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGcg > 1:3344889/1‑93 (MQ=255)
cGACTTAACTGTGTTGATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGcg < 1:5599787/93‑1 (MQ=255)
cGACTTAACTGTGTTGATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGcg > 1:2145072/1‑93 (MQ=255)
aCTTAACTGTGTTGATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGcgcg > 2:4538231/1‑93 (MQ=255)
ttAACTGTGTTGATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGACGCGTc > 2:768095/1‑93 (MQ=255)
tAACTGTGTTGATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGACGCGTCa > 2:6247575/1‑93 (MQ=255)
aaCTGTGTTGATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCAc < 2:4028070/93‑1 (MQ=255)
aaCTGTGTTGATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCAc < 2:2220234/93‑1 (MQ=255)
tgtgTTGATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGt < 2:6460483/93‑1 (MQ=255)
tgtgTTGATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGt > 1:220542/1‑93 (MQ=255)
tgtgTTGATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGt > 1:1480319/1‑93 (MQ=255)
gtgtTGATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGACGCGTCACGGtt < 1:1129473/93‑1 (MQ=255)
gtgtTGATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGACGCGTCACGGtt < 1:627276/93‑1 (MQ=255)
tgtTGATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGttt > 2:2585975/1‑93 (MQ=255)
ttGATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTcc < 2:108519/93‑1 (MQ=255)
atcatcGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCggg < 1:5027057/93‑1 (MQ=255)
tcatcGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCgggg > 1:3531569/1‑93 (MQ=255)
tcGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTa > 2:3030243/1‑93 (MQ=255)
cGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTaa < 1:5151174/93‑1 (MQ=255)
gTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAg > 2:2328120/1‑93 (MQ=255)
gTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAg > 2:850569/1‑93 (MQ=255)
tACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGt > 1:2646827/1‑93 (MQ=255)
tACGCAAGTGACCAACGCTGTCGATGGTGGCTTTGATGCCAACGATATTCTCGTTTTGCAGAGACAGGCGCGTCACGGTTTCCGGGGTTAAGt > 2:3767144/1‑93 (MQ=255)
aCGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTc < 1:657200/93‑1 (MQ=255)
cGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTcc < 1:2969122/93‑1 (MQ=255)
gCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCt < 2:1444556/93‑1 (MQ=255)
gCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCt < 2:2127312/93‑1 (MQ=255)
cAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTg < 1:1391273/93‑1 (MQ=255)
aGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGAc > 1:2072/1‑93 (MQ=255)
gTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGAcc < 2:5170624/93‑1 (MQ=255)
gTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGAcc < 2:5621490/93‑1 (MQ=255)
ccAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTc < 1:955478/93‑1 (MQ=255)
ccAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTc > 1:2219696/1‑93 (MQ=255)
ccAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTc < 2:2305347/93‑1 (MQ=255)
ccAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTc > 1:3142244/1‑93 (MQ=255)
caaaCGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTc > 1:6139137/3‑93 (MQ=255)
aaCGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAg > 2:3487135/1‑93 (MQ=255)
cTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATcc > 1:177/1‑93 (MQ=255)
cTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATcc > 1:3200884/1‑93 (MQ=255)
tCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGa > 1:5395954/1‑93 (MQ=255)
tCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGa > 2:2037105/1‑93 (MQ=255)
gATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGaaa > 2:5973640/1‑93 (MQ=255)
aTGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTGCTGACCCGTCAGATCCGGAAAg > 1:2365870/1‑93 (MQ=255)
aTGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAg > 2:4770853/1‑93 (MQ=255)
aTGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGATTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAg > 2:3795813/1‑93 (MQ=255)
tGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGt > 2:1184974/1‑93 (MQ=255)
tGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGt < 1:1066489/93‑1 (MQ=255)
gtgtCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTg > 2:5541627/1‑93 (MQ=255)
gtgtCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTg > 1:3655612/1‑93 (MQ=255)
gtgtCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTg < 2:3600643/93‑1 (MQ=255)
tgtCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGt > 2:530770/1‑93 (MQ=255)
tgtCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGt < 1:5083036/93‑1 (MQ=255)
gtCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTa > 2:91880/1‑93 (MQ=255)
gtCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTa < 1:5515247/93‑1 (MQ=255)
tCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTAc > 2:5776208/1‑93 (MQ=255)
cTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACa < 1:2037105/93‑1 (MQ=255)
tttGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAg > 2:1705511/1‑93 (MQ=255)
tttGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAg < 2:4366600/93‑1 (MQ=255)
gATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGAt > 2:5915921/1‑93 (MQ=255)
aTGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATc > 1:5300408/1‑93 (MQ=255)
tGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCa > 1:4025037/1‑93 (MQ=255)
tGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCa > 1:134095/1‑93 (MQ=255)
tGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCa < 2:3164036/93‑1 (MQ=255)
tGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCa < 1:4483397/93‑1 (MQ=255)
ccAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCAcc > 2:1658143/1‑93 (MQ=255)
cAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCg > 2:5013098/1‑93 (MQ=255)
aaCGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCgg > 1:1701375/1‑93 (MQ=255)
aaCGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCgg > 2:5352513/1‑93 (MQ=255)
aaCGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCgg < 1:4245447/93‑1 (MQ=255)
aCGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGt > 1:4413533/1‑93 (MQ=255)
aCGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGt < 1:6114018/93‑1 (MQ=255)
aCGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGt < 2:1975269/93‑1 (MQ=255)
cGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGTa < 1:6376121/93‑1 (MQ=255)
gATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGTAg < 2:1215187/93‑1 (MQ=255)
tatTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGTAggg < 2:4949805/93‑1 (MQ=255)
tatTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGTAggg < 1:1022975/93‑1 (MQ=255)
tatTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGTAggg < 1:4284773/93‑1 (MQ=255)
ttCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGTAGGGTg > 1:3975451/1‑93 (MQ=255)
tcGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGTAGGGTGACg < 2:464560/93‑1 (MQ=255)
gTTTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCt > 2:5462811/1‑93 (MQ=255)
gTTGTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCt < 1:2500215/93‑1 (MQ=255)
ttttGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTa > 2:1551667/1‑93 (MQ=255)
ttttGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTa > 2:5226847/1‑93 (MQ=255)
tttGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGTAGGGGGACGCTAc > 2:4585479/1‑93 (MQ=255)
tGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACgg < 2:3308138/93‑1 (MQ=255)
tGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACgg < 1:4891286/93‑1 (MQ=255)
gCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACggg < 1:5875579/93‑1 (MQ=255)
gCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACggg < 1:4617451/93‑1 (MQ=255)
cAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGc > 2:4159304/1‑93 (MQ=255)
agagCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCg > 2:2515872/1‑93 (MQ=255)
agagCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCg > 2:4846794/1‑93 (MQ=255)
gagCCAGACGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCGa > 2:3361857/1‑93 (MQ=255)
gCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCGATc < 1:277847/93‑1 (MQ=255)
ccAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCGATct < 2:2840731/93‑1 (MQ=255)
ccAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCGATct < 1:2483018/93‑1 (MQ=255)
ccAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCGATct < 1:722228/93‑1 (MQ=255)
cAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCGATctg > 2:3697867/1‑93 (MQ=255)
gACGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCGATctgct < 1:3286335/93‑1 (MQ=255)
|
CCGACTTAACTGTGTTGATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCGATCTGCT > NC_000913/4522032‑4522214
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TACCGACTTAACTGTGTTGATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCGATCTGCTGG > NC_000913/4522030‑4522216
|
TACCGACTTAACTGTGTTGATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGG < SRR4302547.3557822/94‑1 (MQ=60)
TACCGACTTAACTGTGTTGATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGG < SRR4302547.3896434/94‑1 (MQ=60)
TACCGACTTAACTGTGTTGATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGG < SRR4302547.6300773/94‑1 (MQ=60)
ACCGACTTAACTGTGTTGATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGC < SRR4302547.1059871/94‑1 (MQ=60)
ACCGACTTAACTGTGTTGATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGC < SRR4302547.6042062/94‑1 (MQ=60)
ACCGACTTAACTGTGTGGATCATCGTACGCAAGTGACAAACGCTGTCGATGGTGTATTTGATGCCAACGATATTCTCGTTTTGCAGAGGCAGGC < SRR4302547.576969/94‑1 (MQ=60)
CCGACTTAACTGTGTTGATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCG > SRR4302547.2187859/1‑94 (MQ=60)
CCGACTTAACTGTGTTGATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCG > SRR4302547.3412619/1‑94 (MQ=60)
CCGACTTAACTGTGTTGATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCG < SRR4302547.4055673/94‑1 (MQ=60)
CCGACTTAACTGTGTTGATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCG > SRR4302547.4345933/1‑94 (MQ=60)
CCGACTTAACTGTGTTGATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCG > SRR4302547.4892732/1‑94 (MQ=60)
CCGACTTAACTGTGTTGATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCG > SRR4302547.5382974/1‑94 (MQ=60)
CCGACTTAACTGTGTTGATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCG < SRR4302547.899633/94‑1 (MQ=60)
CCGACTTAACTGTGTTGATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGACG < SRR4302547.5664536/94‑1 (MQ=60)
CCGACTTAACTGTGTTGATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGACG < SRR4302547.6065333/94‑1 (MQ=60)
CGACTTAACTGTGTTGATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGTGCCAGGCGC < SRR4302547.6613795/94‑1 (MQ=60)
CGACTTAACTGTGTTGATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGC < SRR4302547.2228632/94‑1 (MQ=60)
CGACTTAACTGTGTTGATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGC < SRR4302547.5715295/94‑1 (MQ=60)
GACTTAACTGTGTTGATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCG > SRR4302547.4555524/1‑94 (MQ=60)
GACTTAACTGTGTTGATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCG < SRR4302547.1151129/94‑1 (MQ=60)
ACTTAACTGTGTTGATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGT > SRR4302547.4758425/1‑94 (MQ=60)
TAACTGTGTTGATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCAC < SRR4302547.5068691/94‑1 (MQ=60)
AACTGTGTTGATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACG > SRR4302547.2810512/1‑94 (MQ=60)
AACTGTGTTGATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACG < SRR4302547.2092034/94‑1 (MQ=60)
CTGTGTTGATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGT > SRR4302547.1509880/1‑94 (MQ=60)
CTGTGTTGATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGT > SRR4302547.224697/1‑94 (MQ=60)
GTGTTGATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTT < SRR4302547.1309706/94‑1 (MQ=60)
GTGTTGATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGACGCGTCACGGTTT < SRR4302547.1152271/94‑1 (MQ=60)
GTGTTGATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGACGCGTCACGGTTT < SRR4302547.638856/94‑1 (MQ=60)
GTTGATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCC < SRR4302547.2379342/94‑1 (MQ=60)
GTTGATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGACGCGTCACGGTTTCC < SRR4302547.2208739/94‑1 (MQ=60)
TTGATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCG < SRR4302547.1368648/94‑1 (MQ=60)
GATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGG < SRR4302547.6216701/94‑1 (MQ=60)
ATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGG < SRR4302547.5130923/94‑1 (MQ=60)
ATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGG > SRR4302547.3603676/1‑94 (MQ=60)
ATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGG > SRR4302547.3376755/1‑94 (MQ=60)
ATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGACGCGTCACGGCTTCCGGGG > SRR4302547.4570136/1‑94 (MQ=60)
TCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGT < SRR4302547.278920/94‑1 (MQ=60)
CATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTT < SRR4302547.6644548/94‑1 (MQ=60)
agcttacaCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTA < SRR4302547.6534120/86‑1 (MQ=60)
CGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAG < SRR4302547.6657719/94‑1 (MQ=60)
CGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAG < SRR4302547.5257277/94‑1 (MQ=60)
CGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAG > SRR4302547.1868742/1‑94 (MQ=60)
GTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGT > SRR4302547.2700074/1‑94 (MQ=60)
ACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCC > SRR4302547.2136106/1‑94 (MQ=60)
ACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCC > SRR4302547.2688010/1‑94 (MQ=60)
ACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTCC < SRR4302547.669304/94‑1 (MQ=60)
CGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCT < SRR4302547.3028221/94‑1 (MQ=60)
GCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTG > SRR4302547.5161830/1‑94 (MQ=60)
GCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTG < SRR4302547.1622890/94‑1 (MQ=60)
GCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTG < SRR4302547.4497968/94‑1 (MQ=60)
CAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGA < SRR4302547.1419118/94‑1 (MQ=60)
AAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGAC > SRR4302547.2107/1‑94 (MQ=60)
AAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGAC > SRR4302547.5027453/1‑94 (MQ=60)
AGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACC < SRR4302547.3436082/94‑1 (MQ=60)
TGACGAACGCTGTCGATTGGGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCCCGGTTTTCGGGGTTAAGTTCTGACCCG > SRR4302547.3727209/1‑94 (MQ=60)
GACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGT < SRR4302547.5774698/94‑1 (MQ=60)
GACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGT < SRR4302547.2420229/94‑1 (MQ=60)
ACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTC > SRR4302547.3204666/1‑94 (MQ=60)
ACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTC > SRR4302547.2264408/1‑94 (MQ=60)
ACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTC > SRR4302547.106488/1‑94 (MQ=60)
ACAAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTC > SRR4302547.6266492/1‑94 (MQ=60)
CCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCA > SRR4302547.556118/1‑94 (MQ=60)
CCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCA < SRR4302547.974041/94‑1 (MQ=60)
CCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCA > SRR4302547.2259735/1‑94 (MQ=60)
ACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGGTAAGTCCTGACCCGTCAGAT > SRR4302547.3294333/1‑94 (MQ=60)
GCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCC > SRR4302547.3264705/1‑94 (MQ=60)
GCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCC > SRR4302547.182/1‑94 (MQ=60)
TGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGG > SRR4302547.6003975/1‑94 (MQ=60)
TGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGG > SRR4302547.5371997/1‑94 (MQ=60)
TGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGG > SRR4302547.5199163/1‑94 (MQ=60)
TGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGG > SRR4302547.1415355/1‑94 (MQ=60)
TGTCGATCGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGG < SRR4302547.1856813/94‑1 (MQ=60)
GTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGA > SRR4302547.5507435/1‑94 (MQ=60)
CGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAA > SRR4302547.172215/1‑94 (MQ=60)
CGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGACAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGGAA > SRR4302547.3590334/1‑94 (MQ=60)
GATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTGCTGACCCGTCAGATCCGGAAAG > SRR4302547.2413826/1‑94 (MQ=60)
GATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAG > SRR4302547.1489575/1‑94 (MQ=60)
GATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAG < SRR4302547.3819607/94‑1 (MQ=60)
ATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGT > SRR4302547.917248/1‑94 (MQ=60)
TGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTT < SRR4302547.1087719/94‑1 (MQ=60)
TGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCGGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTG < SRR4302547.3026128/94‑1 (MQ=60)
GGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTG > SRR4302547.5204481/1‑94 (MQ=60)
GGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTG < SRR4302547.5876646/94‑1 (MQ=60)
GGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTG > SRR4302547.3730190/1‑94 (MQ=60)
GTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGT < SRR4302547.4643500/94‑1 (MQ=60)
GTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGT < SRR4302547.3260795/94‑1 (MQ=60)
GTGTCTTTGATGCCAACGATATTCTCGTTCTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGT < SRR4302547.3731384/94‑1 (MQ=60)
TGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTA < SRR4302547.5187901/94‑1 (MQ=60)
TGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGACCCGGAAAGTTGTA < SRR4302547.2275397/94‑1 (MQ=60)
GTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTAC > SRR4302547.2975704/1‑94 (MQ=60)
GTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTAC < SRR4302547.5629103/94‑1 (MQ=60)
CTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAG < SRR4302547.2077714/94‑1 (MQ=60)
CTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAG < SRR4302547.2477085/94‑1 (MQ=60)
CTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAG > SRR4302547.3126447/1‑94 (MQ=60)
CTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAG > SRR4302547.1793049/1‑94 (MQ=60)
TGATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGAT < SRR4302547.6378003/94‑1 (MQ=60)
GATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATC > SRR4302547.5409766/1‑94 (MQ=60)
ATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCA < SRR4302547.4260246/94‑1 (MQ=60)
ATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCA > SRR4302547.4106814/1‑94 (MQ=60)
ATGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCA > SRR4302547.136519/1‑94 (MQ=60)
TGCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCAC < SRR4302547.4576017/94‑1 (MQ=60)
GCCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACC < SRR4302547.2952286/94‑1 (MQ=60)
CCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCG < SRR4302547.6245088/94‑1 (MQ=60)
CCAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCG < SRR4302547.3257681/94‑1 (MQ=60)
CAACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGG > SRR4302547.1734807/1‑94 (MQ=60)
AACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGT > SRR4302547.4504549/1‑94 (MQ=60)
AACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGT < SRR4302547.4332288/94‑1 (MQ=60)
ACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGTA < SRR4302547.2090378/94‑1 (MQ=60)
ACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGTA > SRR4302547.3382954/1‑94 (MQ=60)
ACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGTA < SRR4302547.6011045/94‑1 (MQ=60)
ACGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGTA < SRR4302547.6240840/94‑1 (MQ=60)
CGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGTAG > SRR4302547.940580/1‑94 (MQ=60)
CGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGTAG < SRR4302547.6509167/94‑1 (MQ=60)
CGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGTAG < SRR4302547.6417492/94‑1 (MQ=60)
CGATATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGTAG < SRR4302547.4089027/94‑1 (MQ=60)
CGATATTCTCGTTTTGCAGAGCCAGACGCGTCACGGTTTCGGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGTAG < SRR4302547.2175635/94‑1 (MQ=60)
GATATTCTCGTTTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGTAGG < SRR4302547.3505760/94‑1 (MQ=60)
ATATTCTCGTTTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGTAGGG < SRR4302547.6219534/94‑1 (MQ=60)
TATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGTAGGGT < SRR4302547.5648785/94‑1 (MQ=60)
TATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGTAGGGT < SRR4302547.1043044/94‑1 (MQ=60)
TATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGTAGGGT < SRR4302547.4372822/94‑1 (MQ=60)
TATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGTAGGGT < SRR4302547.4598511/94‑1 (MQ=60)
TATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGTAGGGG > SRR4302547.4340861/1‑94 (MQ=60)
GATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGTAGGGT < SRR4302547.6464106/94‑1 (MQ=60)
ATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGTAGGGTG > SRR4302547.4056291/1‑94 (MQ=60)
ATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGTAGGGTG < SRR4302547.3123850/94‑1 (MQ=60)
ATTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGTAGGGTG < SRR4302547.5158764/94‑1 (MQ=60)
TTCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGTAGGGTGA < SRR4302547.5486359/94‑1 (MQ=60)
TCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGTAGGGTGAC < SRR4302547.4330942/94‑1 (MQ=60)
TCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGTAGGGTGAC > SRR4302547.406802/1‑94 (MQ=60)
TCTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGTAGGGTGAC > SRR4302547.680962/1‑94 (MQ=60)
CTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCTGTCAGATCCGGAAAGTTGTACAGGATCACCGGTAGGGTGACG > SRR4302547.6312442/1‑94 (MQ=60)
CTCGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGTAGGGTGACG > SRR4302547.5526163/1‑94 (MQ=60)
CTCGTTTAGCAGAGCCAGGCGCGTCACGGTTTCGGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACTGGATCACCGGTAGGGTGACG < SRR4302547.6609961/94‑1 (MQ=60)
CGTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCT > SRR4302547.1102378/1‑94 (MQ=60)
CGTTGTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCT < SRR4302547.3628713/94‑1 (MQ=60)
GTTTTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTA < SRR4302547.2251623/94‑1 (MQ=60)
GTTGTGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTA < SRR4302547.2550724/94‑1 (MQ=60)
TGCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCTGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGG < SRR4302547.2535549/94‑1 (MQ=60)
TGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGG < SRR4302547.4992590/94‑1 (MQ=60)
GCAGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGC < SRR4302547.5997212/94‑1 (MQ=60)
GCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGC < SRR4302547.4713062/94‑1 (MQ=60)
AGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCGA < SRR4302547.1437819/94‑1 (MQ=60)
AGAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCGA < SRR4302547.1249514/94‑1 (MQ=60)
GAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCGAT > SRR4302547.180156/1‑94 (MQ=60)
GAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCGAT < SRR4302547.6761287/94‑1 (MQ=60)
GAGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCGAT > SRR4302547.5451662/1‑94 (MQ=60)
AGCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCGATC > SRR4302547.2630802/1‑94 (MQ=60)
GCCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCGATCT < SRR4302547.283031/94‑1 (MQ=60)
GCCAGACGCGTCACGCTTTCCGGGGTTAAGTCCTGACCCGTTAGATCCGGAAACTTGTCCAGGATCACCGGTAGGGTGACGCTACGGGCGATCT < SRR4302547.3299964/94‑1 (MQ=60)
CCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCGATCTG < SRR4302547.2533201/94‑1 (MQ=60)
CCAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCGATCTG < SRR4302547.735679/94‑1 (MQ=60)
CAGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCGATCTGC > SRR4302547.3485932/1‑94 (MQ=60)
AGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGTGCGATCTGCT > SRR4302547.1742465/1‑94 (MQ=60)
AGGCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCGATCTGCT > SRR4302547.6236973/1‑94 (MQ=60)
GACGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCGATCTGCTG < SRR4302547.3352249/94‑1 (MQ=60)
GCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCGATCTGCTGG < SRR4302547.5540505/94‑1 (MQ=60)
GCGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCGATCTGCTGG < SRR4302547.1538221/94‑1 (MQ=60)
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TACCGACTTAACTGTGTTGATCATCGTACGCAAGTGACCAACGCTGTCGATGGTGTCTTTGATGCCAACGATATTCTCGTTTTGCAGAGCCAGACGCGTCACGGTTTCCGGGGTTAAGTCCTGACCCGTCAGATCCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCGATCTGCTGG > NC_000913/4522030‑4522216
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 5 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
