Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
593 |
264.2 |
13311096 |
97.8% |
13018251 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,621,505 |
A→G |
M61T (ATG→ACG) |
lplA ← |
lipoate‑protein ligase A |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,621,505 | 0 | A | G | 85.6%
| 654.2
/ 93.4
| 257 | M61T (ATG→ACG) | lplA | lipoate‑protein ligase A |
| Reads supporting (aligned to +/- strand): ref base A (23/14); new base G (126/94); total (149/108) |
| Fisher's exact test for biased strand distribution p-value = 7.19e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.55e-01 |
Only 100 of 262 total aligned reads displayed.
CAGCCATAAAGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGT > NC_000913/4621413‑4621596
|
agccaTAAAGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCAt > 2:4160288/1‑93 (MQ=255)
gccaTAAAGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTc > 1:6478527/1‑93 (MQ=255)
gccaTAAAGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTc < 2:3790299/93‑1 (MQ=255)
ccaTAAAGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTcc > 2:3380256/1‑93 (MQ=255)
aTAAAGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATccgc > 2:3005707/1‑93 (MQ=255)
tAAAGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTccgcc < 2:2045668/93‑1 (MQ=255)
tAAAGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATccgcc > 2:6623330/1‑93 (MQ=255)
aaaGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTccgccg > 1:9221/1‑93 (MQ=255)
aaaGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTccgccg < 1:4608363/93‑1 (MQ=255)
aaGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATCCGCCgg > 1:6606469/1‑93 (MQ=255)
aGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCggg > 1:1197940/1‑93 (MQ=255)
ggTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCACCAGGCGGACGTTATCTTCTTCCATCCGCCGGGt > 1:3221172/1‑93 (MQ=255)
tAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTAt < 1:4869161/93‑1 (MQ=255)
tAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTAt < 1:3183223/93‑1 (MQ=255)
aaaGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTAtt < 2:1088480/93‑1 (MQ=255)
aGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTac > 1:1586871/1‑93 (MQ=255)
aGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTac > 1:2633584/1‑93 (MQ=255)
gCAGGTGTTGCCGAGATGGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTaca < 2:2828091/93‑1 (MQ=255)
ggTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACActc > 1:3347309/1‑93 (MQ=255)
ggTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACActc > 1:3715331/1‑93 (MQ=255)
gTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACActct < 2:1549010/93‑1 (MQ=255)
tATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCtt < 1:2717219/93‑1 (MQ=255)
tATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCtt > 2:3270678/1‑93 (MQ=255)
aTTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCttt > 1:1969378/1‑93 (MQ=255)
aTTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCttt > 1:5948795/1‑93 (MQ=255)
ttGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTc > 1:477547/1‑93 (MQ=255)
gtGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTc < 2:6150384/92‑1 (MQ=255)
tcccGAGATCGTCGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTcc < 1:1251426/91‑1 (MQ=255)
tGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTcc < 2:4634998/93‑1 (MQ=255)
gCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCa < 1:4741593/93‑1 (MQ=255)
ccGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCAc < 1:6111519/93‑1 (MQ=255)
ccGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCAc < 2:5582101/93‑1 (MQ=255)
ccGAGATCGTCGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCAc < 1:1546174/93‑1 (MQ=255)
gagaTCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACgg < 1:5221696/93‑1 (MQ=255)
gaTCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGt > 2:6173784/1‑93 (MQ=255)
gaTCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGt < 2:4564481/93‑1 (MQ=255)
gaTCGTGGAACACAGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGt < 1:1220198/93‑1 (MQ=255)
aTCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGtt > 2:3083030/1‑93 (MQ=255)
aTCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGtt > 2:2959188/1‑93 (MQ=255)
tCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTc < 1:5585897/93‑1 (MQ=255)
tCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTc < 2:215986/93‑1 (MQ=255)
cGTGGAACCCCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCt < 2:4835387/93‑1 (MQ=255)
gTGGAACCCCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTg < 2:5228580/93‑1 (MQ=255)
gTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTg > 2:5889851/1‑93 (MQ=255)
gTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTg > 2:4061810/1‑93 (MQ=255)
gTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTg > 2:819646/1‑93 (MQ=255)
tGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTgc > 1:424648/1‑93 (MQ=255)
ggAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTgcg < 2:1586846/93‑1 (MQ=255)
aaCACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTgcgcg > 2:5051540/1‑93 (MQ=255)
acacCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTgcgcgc < 1:3011854/93‑1 (MQ=255)
acacCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTgcgcgc < 2:2767204/93‑1 (MQ=255)
cacCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGcgcgcg > 2:545025/1‑93 (MQ=255)
acCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGcgcgcgc > 2:3867569/1‑92 (MQ=255)
acCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGa > 1:3470190/1‑93 (MQ=255)
ccGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGAc < 1:3793062/93‑1 (MQ=255)
cgccgcCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCaa < 2:4238478/93‑1 (MQ=255)
cgccgcCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCaa > 2:1474232/1‑93 (MQ=255)
cccgccACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAAt < 2:6344225/92‑1 (MQ=255)
cgccACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATta > 1:1781813/1‑93 (MQ=255)
cgacACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATta > 2:1640401/4‑93 (MQ=255)
gccACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATtac > 1:6311222/1‑93 (MQ=255)
gccACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATtac < 2:5361247/93‑1 (MQ=255)
cACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATtacta > 1:735174/1‑93 (MQ=255)
cACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATtacta > 1:6388816/1‑93 (MQ=255)
aCCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATtactac > 2:267571/1‑93 (MQ=255)
ccGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTAcc < 2:1848129/93‑1 (MQ=255)
ccGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTAcc > 2:1413148/1‑93 (MQ=255)
ccGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTAcc < 1:2587853/93‑1 (MQ=255)
gCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCgt > 1:5376744/1‑93 (MQ=255)
gCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCgt > 1:386671/1‑93 (MQ=255)
gCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCgt > 1:4809018/1‑93 (MQ=255)
tACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCgtgt > 1:2031954/1‑93 (MQ=255)
tGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCgg > 1:6129004/1‑93 (MQ=255)
cgccgcgccAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCa > 1:1838097/1‑93 (MQ=255)
gccgcgccAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTGCTACCGTGTCGGCAt < 2:1823008/93‑1 (MQ=255)
ccgcgccAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCact > 2:527053/1‑91 (MQ=255)
cgcgccAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTg > 2:1014418/1‑93 (MQ=255)
gcgccAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTgc > 2:6020430/1‑93 (MQ=255)
ccAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGcc > 1:1119632/1‑93 (MQ=255)
ccAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGcc > 2:1448645/1‑93 (MQ=255)
ccAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGcc < 1:5194084/93‑1 (MQ=255)
ccAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGcc > 2:5183500/1‑93 (MQ=255)
aGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCag > 1:1653521/1‑93 (MQ=255)
ggCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCaga < 2:2142928/93‑1 (MQ=255)
gACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGaaa > 2:2575188/1‑93 (MQ=255)
gACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGaaa > 1:949970/1‑93 (MQ=255)
gACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGaaa < 2:645920/93‑1 (MQ=255)
gACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGaaa > 1:5764731/1‑93 (MQ=255)
gACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGaaa > 2:5349266/1‑93 (MQ=255)
gACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGaaa < 2:3449126/93‑1 (MQ=255)
aCGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAAc > 1:2876284/1‑93 (MQ=255)
cGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACa < 2:319331/93‑1 (MQ=255)
tATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAGaa < 2:6280457/93‑1 (MQ=255)
tcttctTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAGAAcg > 1:1486754/1‑93 (MQ=255)
tcttctTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTACGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAGAAcg > 2:6577879/1‑93 (MQ=255)
cttcttCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAGAAcgc < 1:2279623/93‑1 (MQ=255)
cttcttCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAGAAcgc > 2:4909490/1‑93 (MQ=255)
cttcCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCt > 1:5062482/1‑93 (MQ=255)
cttcCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCt < 2:1309207/93‑1 (MQ=255)
ttcCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTg > 1:360890/1‑93 (MQ=255)
|
CAGCCATAAAGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGT > NC_000913/4621413‑4621596
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CCAGCCATAAAGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGG > NC_000913/4621412‑4621598
|
CCAGCCATAAAGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCG > SRR4302547.1863599/1‑94 (MQ=60)
CCAGCCATAAAGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCG > SRR4302547.784123/1‑94 (MQ=60)
AGCCATAAAGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTC > SRR4302547.6613418/1‑94 (MQ=60)
AGCCATAAAGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTC > SRR4302547.3081334/1‑94 (MQ=60)
CATAAAGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGC > SRR4302547.1844928/1‑94 (MQ=60)
ATAAAGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCC > SRR4302547.1822770/1‑94 (MQ=60)
TAAAGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCG > SRR4302547.9392/1‑94 (MQ=60)
TAAAGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCG > SRR4302547.1642969/1‑94 (MQ=60)
AAAGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGG < SRR4302547.4703737/94‑1 (MQ=60)
AAAGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATCCGCCGG > SRR4302547.5305743/1‑94 (MQ=60)
AAAGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATCCGCCGG > SRR4302547.6743995/1‑94 (MQ=60)
AAGGTAAAGCAGGTATTGCCGAGATCGTGGCACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGG > SRR4302547.564681/1‑94 (MQ=60)
AAGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGG > SRR4302547.3285124/1‑94 (MQ=60)
AAGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGG > SRR4302547.4497011/1‑94 (MQ=60)
AAGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGG > SRR4302547.1222111/1‑94 (MQ=60)
AGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGT < SRR4302547.4920939/94‑1 (MQ=60)
AGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGT > SRR4302547.1236923/1‑94 (MQ=60)
AGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCACCAGGCGGACGTTATCTTCTTCCATCCGCCGGGT > SRR4302547.3285424/1‑94 (MQ=60)
GGTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTA > SRR4302547.1875045/1‑94 (MQ=60)
TAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATT < SRR4302547.3246657/94‑1 (MQ=60)
TAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATT < SRR4302547.4970066/94‑1 (MQ=60)
AAAGCAGGTATTGCAGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTA > SRR4302547.6516339/1‑94 (MQ=60)
AAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTAC > SRR4302547.1618414/1‑94 (MQ=60)
AAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTAC > SRR4302547.2686633/1‑94 (MQ=60)
AGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACC > SRR4302547.962931/1‑94 (MQ=60)
GCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACAC < SRR4302547.246868/94‑1 (MQ=60)
CAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACT > SRR4302547.304022/1‑94 (MQ=60)
CAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACT < SRR4302547.4885792/94‑1 (MQ=60)
CAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACT > SRR4302547.1283353/1‑94 (MQ=60)
AGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTC > SRR4302547.5501760/1‑94 (MQ=60)
AGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTC > SRR4302547.2047135/1‑94 (MQ=60)
AGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTC > SRR4302547.2759536/1‑94 (MQ=60)
AGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTC > SRR4302547.3415150/1‑94 (MQ=60)
AGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTC > SRR4302547.3791166/1‑94 (MQ=60)
GGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCT < SRR4302547.3581565/94‑1 (MQ=60)
TATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTT > SRR4302547.2008497/1‑94 (MQ=60)
TATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTT > SRR4302547.6072155/1‑94 (MQ=60)
TATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTT < SRR4302547.2771768/94‑1 (MQ=60)
TATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTT < SRR4302547.3491496/94‑1 (MQ=60)
ATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTC > SRR4302547.486322/1‑94 (MQ=60)
TTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCC > SRR4302547.5853240/1‑94 (MQ=60)
TGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCA > SRR4302547.2551163/1‑94 (MQ=60)
TCCCGAGATCGTCGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCA < SRR4302547.1276680/94‑1 (MQ=60)
GCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCAC > SRR4302547.6040289/1‑94 (MQ=60)
GCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCAC < SRR4302547.4839858/94‑1 (MQ=60)
CCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACG < SRR4302547.6238291/94‑1 (MQ=60)
CCGAGATCGTCGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACG < SRR4302547.1576959/94‑1 (MQ=60)
ccagatcccggcacactGCGCCGCCGCCGCTACCGCGCCGCGCCCCGCGGACGTTATCTTCTTCCGTCCGCCGGGCATTACACTCTTTCCACGG > SRR4302547.6164083/18‑94 (MQ=58)
CGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGG > SRR4302547.5229244/1‑94 (MQ=60)
CGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGG < SRR4302547.2251041/94‑1 (MQ=60)
GAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGG > SRR4302547.2703917/1‑94 (MQ=60)
GAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGG < SRR4302547.5329145/94‑1 (MQ=60)
GAGATCGTGGAACACCGCGCCGCCACCGCCACTGCGCCGCGCCTGTCGGACGCTATCTTCTGCCGGCCGCCGGGTATTACACTTCTTCCACGGG > SRR4302547.4366860/1‑94 (MQ=53)
AGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGT > SRR4302547.1545407/1‑94 (MQ=60)
GATCGTGGAACACAGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTT < SRR4302547.1244825/94‑1 (MQ=60)
TCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCT < SRR4302547.5701108/94‑1 (MQ=60)
CGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTG > SRR4302547.946204/1‑94 (MQ=60)
GTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGC > SRR4302547.432519/1‑94 (MQ=60)
GTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGC < SRR4302547.378300/94‑1 (MQ=60)
GTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGC > SRR4302547.6571310/1‑94 (MQ=60)
GTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGC < SRR4302547.3723272/94‑1 (MQ=60)
gggatctCCGCGCCGCCACCGCTACTTCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCG < SRR4302547.4059093/87‑1 (MQ=60)
TGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCG > SRR4302547.4863593/1‑94 (MQ=60)
TGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCG < SRR4302547.4305219/94‑1 (MQ=60)
AACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGC > SRR4302547.2679366/1‑94 (MQ=60)
AACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGC < SRR4302547.913023/94‑1 (MQ=60)
ACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCG < SRR4302547.3306603/94‑1 (MQ=60)
ACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCG < SRR4302547.3071736/94‑1 (MQ=60)
ACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCG > SRR4302547.1572649/1‑94 (MQ=60)
CACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGA > SRR4302547.3540962/1‑94 (MQ=60)
ACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGAC < SRR4302547.4789754/94‑1 (MQ=60)
CCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACC < SRR4302547.3870392/94‑1 (MQ=60)
CGCGCCGCAACAGCTACTGCGCCGCGCCAGGCGGTCGTTATCTTCTTCCGTCCGCCAGGTATTACACTCataacacagagtctccgcgtgacca > SRR4302547.1676231/1‑69 (MQ=56)
GCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAA < SRR4302547.5305882/94‑1 (MQ=60)
CCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTA > SRR4302547.1817119/1‑94 (MQ=60)
CGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTAC < SRR4302547.6061761/94‑1 (MQ=60)
CGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTAC > SRR4302547.6442444/1‑94 (MQ=60)
CCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTA > SRR4302547.748920/1‑94 (MQ=60)
CCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTA > SRR4302547.6522116/1‑94 (MQ=60)
CCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTA > SRR4302547.175072/1‑94 (MQ=60)
CCCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACC < SRR4302547.314572/94‑1 (MQ=60)
CCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCG < SRR4302547.2640066/94‑1 (MQ=60)
CCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCG > SRR4302547.5343672/1‑94 (MQ=60)
CGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGT > SRR4302547.393840/1‑94 (MQ=60)
CGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGT > SRR4302547.5487727/1‑94 (MQ=60)
CGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGT > SRR4302547.4908695/1‑94 (MQ=60)
GCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTG < SRR4302547.6252152/94‑1 (MQ=60)
GCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTG < SRR4302547.4965183/94‑1 (MQ=60)
CTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGT < SRR4302547.1903272/94‑1 (MQ=60)
CTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGT > SRR4302547.2990888/1‑94 (MQ=60)
CTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGT > SRR4302547.2072425/1‑94 (MQ=60)
CTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGG > SRR4302547.641311/1‑94 (MQ=60)
CTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGG > SRR4302547.6256144/1‑94 (MQ=60)
TGCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGC < SRR4302547.779498/94‑1 (MQ=60)
GCGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCA > SRR4302547.1874426/1‑94 (MQ=60)
CGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCAT > SRR4302547.4778457/1‑94 (MQ=60)
CGCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCAT > SRR4302547.5290104/1‑94 (MQ=60)
GCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATT < SRR4302547.2101304/94‑1 (MQ=60)
GCCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATC < SRR4302547.3914905/94‑1 (MQ=60)
CCGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTG > SRR4302547.1589877/1‑94 (MQ=60)
CGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGC < SRR4302547.1168352/94‑1 (MQ=60)
CGCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGC > SRR4302547.3405093/1‑94 (MQ=60)
GCGCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCG > SRR4302547.5105511/1‑94 (MQ=60)
GCCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCC > SRR4302547.1142199/1‑94 (MQ=60)
CCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCA < SRR4302547.5300981/94‑1 (MQ=60)
CCAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCA > SRR4302547.3531289/1‑94 (MQ=60)
CAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAG > SRR4302547.1666977/1‑94 (MQ=60)
CAGGCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAG > SRR4302547.1686142/1‑94 (MQ=60)
GCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGTGCCAGAGA < SRR4302547.6447851/94‑1 (MQ=60)
GCGGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGA > SRR4302547.3936253/1‑94 (MQ=60)
GGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAA > SRR4302547.968422/1‑94 (MQ=60)
GGACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAA > SRR4302547.5883956/1‑94 (MQ=60)
GACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAAC > SRR4302547.2933702/1‑94 (MQ=60)
ACGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACA < SRR4302547.67992/94‑1 (MQ=60)
CGTTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAG > SRR4302547.1269217/1‑94 (MQ=60)
TTATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAGAA < SRR4302547.4879666/94‑1 (MQ=60)
ATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACG > SRR4302547.4256558/1‑94 (MQ=60)
ATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACG < SRR4302547.606325/94‑1 (MQ=60)
ATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACG > SRR4302547.1516435/1‑94 (MQ=60)
ATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACG > SRR4302547.668797/1‑94 (MQ=60)
ATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACG < SRR4302547.665272/94‑1 (MQ=60)
ATCTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACG > SRR4302547.2878454/1‑94 (MQ=60)
CTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCG < SRR4302547.2325763/94‑1 (MQ=60)
CTTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCG < SRR4302547.1311194/94‑1 (MQ=60)
TTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGC < SRR4302547.3856687/94‑1 (MQ=60)
TTCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGC > SRR4302547.1243250/1‑94 (MQ=60)
TCTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCT > SRR4302547.5166945/1‑94 (MQ=60)
CTTCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTG > SRR4302547.367585/1‑94 (MQ=60)
TCCGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCG > SRR4302547.4828688/1‑94 (MQ=60)
CGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTG < SRR4302547.4702680/94‑1 (MQ=60)
CGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTG < SRR4302547.107115/94‑1 (MQ=60)
CGTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTG < SRR4302547.6344523/94‑1 (MQ=60)
GTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGG < SRR4302547.4346154/94‑1 (MQ=60)
|
CCAGCCATAAAGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGG > NC_000913/4621412‑4621598
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
