Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I2 R1 593 264.2 13311096 97.8% 13018251 93.0

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output
GCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCCG‑‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCACGCCACT  >  NC_000913/4013083‑4013261
                                                                                             |                                                                                       
GCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCG                                                                                         <  SRR4302547.3896698/94‑1 (MQ=60)
GCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCG                                                                                         <  SRR4302547.343514/94‑1 (MQ=60)
GCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCG                                                                                         >  SRR4302547.175434/1‑94 (MQ=60)
GCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCG                                                                                         <  SRR4302547.3728483/94‑1 (MQ=60)
 CTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGG                                                                                        <  SRR4302547.1989282/94‑1 (MQ=60)
 CTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGG                                                                                        >  SRR4302547.4543449/1‑94 (MQ=60)
  TTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGACGAGAAT‑CG‑‑GC                                                                                    >  SRR4302547.6793989/1‑94 (MQ=60)
   TTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAAT‑CG‑‑GCG                                                                                   >  SRR4302547.5015699/1‑94 (MQ=60)
   TTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAAT‑CG‑‑GCG                                                                                   >  SRR4302547.5744662/1‑94 (MQ=60)
   TTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAAT‑CG‑‑GCG                                                                                   >  SRR4302547.6697134/1‑94 (MQ=60)
        ATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGACGAGAATCGGC‑GCGTTA                                                                                >  SRR4302547.2721851/1‑94 (MQ=60)
         TTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAA                                                                               <  SRR4302547.523308/94‑1 (MQ=60)
         TTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAA                                                                               <  SRR4302547.1787618/94‑1 (MQ=60)
            ccagcccgcgccgctTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCCCCATATAAGCCGAGAA‑CCGGCGCGTTAAGAT                                                                            <  SRR4302547.3599331/79‑1 (MQ=60)
            GCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGAT                                                                            <  SRR4302547.450329/94‑1 (MQ=60)
            GCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGAT                                                                            <  SRR4302547.538584/94‑1 (MQ=60)
             CAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATC                                                                           >  SRR4302547.4999842/1‑94 (MQ=60)
             CAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATC                                                                           >  SRR4302547.4147036/1‑94 (MQ=60)
             CAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATC                                                                           <  SRR4302547.2652399/94‑1 (MQ=60)
             CAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATC                                                                           >  SRR4302547.3013683/1‑94 (MQ=60)
             CAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATC                                                                           <  SRR4302547.5898326/94‑1 (MQ=60)
             CAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATC                                                                           <  SRR4302547.3446685/94‑1 (MQ=60)
              AGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCG                                                                          >  SRR4302547.6025373/1‑94 (MQ=60)
              AGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCG                                                                          >  SRR4302547.2098053/1‑94 (MQ=60)
              AGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCG                                                                          >  SRR4302547.1423230/1‑94 (MQ=60)
              AGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCG                                                                          >  SRR4302547.6283206/1‑94 (MQ=60)
              AGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCG                                                                          >  SRR4302547.1439542/1‑94 (MQ=60)
              AGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCG                                                                          >  SRR4302547.2539344/1‑94 (MQ=60)
              AGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGACGAGAATCGGC‑GCGTTAAGATCG                                                                          >  SRR4302547.3721724/1‑94 (MQ=60)
               GCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGG                                                                         <  SRR4302547.6014958/94‑1 (MQ=60)
               GCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGG                                                                         >  SRR4302547.3225439/1‑94 (MQ=60)
                CCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAACGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGT                                                                        >  SRR4302547.4182628/1‑94 (MQ=60)
                  CGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTG                                                                      <  SRR4302547.2186423/94‑1 (MQ=60)
                  CGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTG                                                                      <  SRR4302547.2384567/94‑1 (MQ=60)
                  CGCAGCGCCTGGCACATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTG                                                                      <  SRR4302547.5969329/94‑1 (MQ=60)
                   GCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGC                                                                     >  SRR4302547.3019310/1‑94 (MQ=60)
                   GCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGC                                                                     <  SRR4302547.6535335/94‑1 (MQ=60)
                   GCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGACGAGAATCGGC‑GCGTTAAGATCGGTTGC                                                                     >  SRR4302547.2105217/1‑94 (MQ=60)
                     AGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGA                                                                   >  SRR4302547.3999152/1‑94 (MQ=60)
                     AGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGA                                                                   >  SRR4302547.6361355/1‑94 (MQ=60)
                      GCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGAT                                                                  <  SRR4302547.4439877/94‑1 (MQ=60)
                        GCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATAT                                                                <  SRR4302547.4054253/94‑1 (MQ=60)
                        GCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATAT                                                                >  SRR4302547.5815453/1‑94 (MQ=60)
                         CCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATC                                                               >  SRR4302547.3640364/1‑94 (MQ=60)
                          CTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCA                                                              <  SRR4302547.3718094/94‑1 (MQ=60)
                            GGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAAC                                                            <  SRR4302547.3444696/94‑1 (MQ=60)
                              CGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAG                                                          <  SRR4302547.6723593/94‑1 (MQ=60)
                               GCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGG                                                         <  SRR4302547.794199/94‑1 (MQ=60)
                               GCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGG                                                         >  SRR4302547.5481095/1‑94 (MQ=60)
                                CATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGT                                                        >  SRR4302547.4134259/1‑94 (MQ=60)
                                CATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGT                                                        >  SRR4302547.4590839/1‑94 (MQ=60)
                                CATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGT                                                        <  SRR4302547.1385234/94‑1 (MQ=60)
                                CATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGT                                                        >  SRR4302547.2743773/1‑94 (MQ=60)
                                CATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGT                                                        >  SRR4302547.1669630/1‑94 (MQ=60)
                                 ATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTT                                                       <  SRR4302547.1307392/94‑1 (MQ=60)
                                 ATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTT                                                       <  SRR4302547.4240556/94‑1 (MQ=60)
                                   GGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGT                                                     <  SRR4302547.374588/94‑1 (MQ=60)
                                   GGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGT                                                     <  SRR4302547.4071847/94‑1 (MQ=60)
                                    GTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTT                                                    <  SRR4302547.4302473/94‑1 (MQ=60)
                                      TTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGGTTC                                                  >  SRR4302547.2448862/1‑94 (MQ=60)
                                       TCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCG                                                 <  SRR4302547.4460777/94‑1 (MQ=60)
                                        CAACGCGCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGG                                                <  SRR4302547.1357986/94‑1 (MQ=60)
                                         AACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGT                                               >  SRR4302547.6428218/1‑94 (MQ=60)
                                            GCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAA                                            <  SRR4302547.2356276/94‑1 (MQ=60)
                                             CTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAAT                                           >  SRR4302547.2538336/1‑94 (MQ=60)
                                               CTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTC                                         <  SRR4302547.4431883/94‑1 (MQ=60)
                                               CTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTC                                         >  SRR4302547.6053191/1‑94 (MQ=60)
                                               CTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTC                                         <  SRR4302547.104832/94‑1 (MQ=60)
                                                CCCTGCGTAATGTTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCA                                        <  SRR4302547.1757007/94‑1 (MQ=60)
                                                 ccggcgaaagtCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAG                                       <  SRR4302547.3608710/83‑1 (MQ=60)
                                                  CTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGC                                      <  SRR4302547.3837435/94‑1 (MQ=60)
                                                  CTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGC                                      <  SRR4302547.6167848/94‑1 (MQ=60)
                                                   TGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCG                                     <  SRR4302547.3240280/94‑1 (MQ=60)
                                                   TGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCG                                     <  SRR4302547.1688377/94‑1 (MQ=60)
                                                   TGCGAAATGCTGTTATCTGCACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCG                                     <  SRR4302547.5764247/94‑1 (MQ=60)
                                                    GCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGA                                    <  SRR4302547.969344/94‑1 (MQ=60)
                                                     CGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGAC                                   >  SRR4302547.5536616/1‑94 (MQ=60)
                                                      GGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACT                                  >  SRR4302547.2803738/1‑94 (MQ=60)
                                                      GGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACT                                  <  SRR4302547.2140422/94‑1 (MQ=60)
                                                      GGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACT                                  >  SRR4302547.5897976/1‑94 (MQ=60)
                                                      GGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACT                                  >  SRR4302547.1765720/1‑94 (MQ=60)
                                                      GGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACT                                  >  SRR4302547.1548504/1‑94 (MQ=60)
                                                       GAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTT                                 <  SRR4302547.4985961/94‑1 (MQ=60)
                                                       GAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTT                                 >  SRR4302547.4594900/1‑94 (MQ=60)
                                                        AATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTG                                >  SRR4302547.430400/1‑94 (MQ=60)
                                                        AATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTG                                <  SRR4302547.591075/94‑1 (MQ=60)
                                                        AATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTG                                <  SRR4302547.4442343/94‑1 (MQ=60)
                                                         ATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGT                               <  SRR4302547.1249595/94‑1 (MQ=60)
                                                         ATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGT                               >  SRR4302547.2511502/1‑94 (MQ=60)
                                                         ATGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGT                               >  SRR4302547.5803211/1‑94 (MQ=60)
                                                          TGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTC                              <  SRR4302547.1129114/94‑1 (MQ=60)
                                                          TGCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTC                              <  SRR4302547.5886701/94‑1 (MQ=60)
                                                           GCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCG                             <  SRR4302547.493691/94‑1 (MQ=60)
                                                           GCTGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCG                             <  SRR4302547.213259/94‑1 (MQ=60)
                                                             TGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTTAGCGACTTGTCGCC                           >  SRR4302547.3552496/1‑94 (MQ=60)
                                                             TGTTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCC                           <  SRR4302547.6311594/94‑1 (MQ=60)
                                                               TTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCG                         <  SRR4302547.2135567/94‑1 (MQ=60)
                                                               TTATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCG                         <  SRR4302547.5047080/94‑1 (MQ=60)
                                                                TATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGT                        >  SRR4302547.1474514/1‑94 (MQ=60)
                                                                TATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGT                        >  SRR4302547.720059/1‑94 (MQ=60)
                                                                 ATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTC                       >  SRR4302547.1802448/1‑94 (MQ=60)
                                                                 ATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTC                       <  SRR4302547.1265247/94‑1 (MQ=60)
                                                                 ATCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTC                       >  SRR4302547.6141193/1‑94 (MQ=60)
                                                                  TCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCA                      <  SRR4302547.6652662/94‑1 (MQ=60)
                                                                  TCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCA                      <  SRR4302547.5628745/94‑1 (MQ=60)
                                                                  TCCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCA                      >  SRR4302547.6087333/1‑94 (MQ=60)
                                                                   CCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAG                     >  SRR4302547.4925385/1‑94 (MQ=60)
                                                                   CCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAG                     >  SRR4302547.1907798/1‑94 (MQ=60)
                                                                   CCTGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAG                     <  SRR4302547.1945866/94‑1 (MQ=60)
                                                                     TGACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTT                   >  SRR4302547.1793889/1‑94 (MQ=60)
                                                                     TGACCACCATATAAGACGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTT                   >  SRR4302547.4237841/1‑94 (MQ=60)
                                                                      GACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTT                  <  SRR4302547.2996520/94‑1 (MQ=60)
                                                                      GACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTT                  <  SRR4302547.2662904/94‑1 (MQ=60)
                                                                       ACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTG                 >  SRR4302547.2216476/1‑94 (MQ=60)
                                                                       ACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTG                 >  SRR4302547.1141915/1‑94 (MQ=60)
                                                                       ACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTG                 >  SRR4302547.6752489/1‑94 (MQ=60)
                                                                       ACCACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTG                 >  SRR4302547.2238088/1‑94 (MQ=60)
                                                                         CACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCC               >  SRR4302547.3829103/1‑94 (MQ=60)
                                                                          ACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCG              >  SRR4302547.4647260/1‑94 (MQ=60)
                                                                          ACCATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCG              <  SRR4302547.3308892/94‑1 (MQ=60)
                                                                            CATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTA            >  SRR4302547.1843351/1‑94 (MQ=60)
                                                                            CATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTA            >  SRR4302547.3628290/1‑94 (MQ=60)
                                                                             ATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTAC           >  SRR4302547.1483500/1‑94 (MQ=60)
                                                                             ATATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTAC           >  SRR4302547.2847109/1‑94 (MQ=60)
                                                                               ATAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCA         <  SRR4302547.3140699/94‑1 (MQ=60)
                                                                                TAAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCAC        <  SRR4302547.2930950/94‑1 (MQ=60)
                                                                                 AAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCAac       >  SRR4302547.2685923/1‑92 (MQ=60)
                                                                                 AAGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCACG       <  SRR4302547.3118195/94‑1 (MQ=60)
                                                                                  AGCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCACGC      >  SRR4302547.2627097/1‑94 (MQ=60)
                                                                                   GCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCACGCC     <  SRR4302547.1314422/94‑1 (MQ=60)
                                                                                   GCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCACGCC     <  SRR4302547.826055/94‑1 (MQ=60)
                                                                                   GCCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCACGCC     <  SRR4302547.4899092/94‑1 (MQ=60)
                                                                                    CCGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCACGCCA    >  SRR4302547.502061/1‑94 (MQ=60)
                                                                                     CGAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCACGCCAC   <  SRR4302547.3924126/94‑1 (MQ=60)
                                                                                      GAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCACGCCACT  <  SRR4302547.3193587/94‑1 (MQ=60)
                                                                                      GAGAATCGGC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCACGCCACT  >  SRR4302547.4527702/1‑94 (MQ=60)
                                                                                             |                                                                                       
GCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATCCG‑‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCACGCCACT  >  NC_000913/4013083‑4013261

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 5 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑