Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F1 I1 R1
|
368 |
332.2 |
13092066 |
97.0% |
12699304 |
150.6 |
Breseq alignment
N/A
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CAGAATTGCTGAGGTCTAGGGGCTTCGCTTTGACTGCAACCACCTTCATCTACGCACCTTAAGTATCCAAACAAAATAGTTGGTGTACTAACGATGTGCATTATGGGATGGGAGGGAGGACAGGGGAAAGGGGAAGGAC‑‑‑GGGGGGGGGGC‑GGA‑GGG‑GG‑‑TT‑GGGCAGTTTAGTGTAGGGGGGTAGAAATCACCGCCTCGGCGGCGTGGTCGGTTCCGATCACCAGACCTGCGCGAGCGCCAGCGATGGTGTACTGGGCGACCATCCGGGTGCGTGCCTTGACGTTGCCAACCACGAAGTC > CP009974/2790745‑2791043
|
CAGAATTGCTGAGGTCTAGGGGCTTCGCTTTGACTGCAACCACCTTCATCTACGCACCTTAAGTATCCAAACAAAATAGTTGGTGTACTAACGATGTGCATTATGGGATGGGAGGGAGGACAGGGGAAAGGGGAAGGAC‑‑‑GGGGGGGGGGG‑G > SRR10918232.2343382/1‑151 (MQ=60)
AGAATTGCTGAGGTCTAGGGGCTTCGCTTTGACTGCAACCACCTTCATCTACGCACCTTAAGTATCCAAACAAAATAGTTGGTGTACTAACGATGTGCATTATGGGATGGGAGGGAGGACAGGGGAAAGGGGAAGGAC‑‑‑GGGGGGGGGGC‑GG > SRR10918232.676317/1‑151 (MQ=60)
TGCTGAGGTCTAGGGGCTTCGCTTTGACTGCAACCACCTTCATCTACGCACCTTAAGTATCCAAACAAAATAGTTGGTGTACTAACGATGTGCATTATGGGATGGGAGGGAGGACAGGGGAAAGGGGAAGGAC‑‑‑GGGGGGGGGGggggaggg > SRR10918232.5008222/1‑143 (MQ=60)
GCTGAGGTCTAGGGGCTTCGCTTTGACTGCAACCACCTTCATCTACGCACCTTAAGTATCCAAACAAAATAGTTGGTGTACTAACGATGTGCATTATGGGATGGGAGGGAGGACAGGGGAAAGGGGAAGGAC‑‑‑GGGGGGGGGGC‑GGA‑GGG‑GG > SRR10918232.4739983/1‑151 (MQ=60)
GAGGTCTAGGGGCTTCGCTTTGACTGCAACCACCTTCATCTACGCACCTTAAGTATCCAAACAAAATAGTTGGTGTACTAACGATGTGCATTATGGGATGGGAGGGAGGACAGGGGAAAGGGGAAGGACG‑‑GGGGGGGGGGC‑GGA‑GGG‑GG‑‑TT > SRR10918232.2957778/1‑151 (MQ=60)
GGTCTAGGGGCTTCGCTTTGACTGCAACCACCTTCATCTACGCACCTTAAGTATCCAAACAAAATAGTTGGTGTACTAACGATGTGCATTATGGGATGGGAGGGAGGACAGGGGAAAGGGGAAGGACG‑‑GGGGGGGGGGC‑GGA‑GGG‑GG‑‑TT‑GG > SRR10918232.1194859/1‑151 (MQ=60)
GGTCTAGGGGCTTCGCTTTGACTGCAACCACCTTCATCTACGCACCTTAAGTATCCAAACAAAATAGTTGGTGTACTAACGATGTGCATTATGGGATGGGAGGGAGGACAGGGGAAAGGGGAAGGACG‑‑GGGGGGGGGGC‑GGA‑GGG‑GG‑‑TT‑GG > SRR10918232.2117857/1‑151 (MQ=60)
CTAGGGGCTTCGCTTTGACTGCAACCACCTTCATCTACGCACCTTAAGTATCCAAACAAAATAGTTGGTGTACTAACGATGTGCATTATGGGATGGGAGGGAGGACAGGGGAAAGGGGAAGGAC‑‑‑GGGGGGGGGGgggggggggggggtggg > SRR10918232.591619/1‑134 (MQ=60)
TAGGGGCTTCGCTTTGACTGCAACCACCTTCATCTACGCACCTTAAGTATCCAAACAAAATAGTTGGTGTACTAACGATGTGCATTATGGGATGGGAGGGAGGACAGGGGAAAGGGGAAGGAC‑‑‑GGGGGGGGGGC‑GGA‑GGG‑GG‑‑GT‑GGGCAGT > SRR10918232.314128/1‑151 (MQ=60)
GGCTTCGCTTTGACTGCAACCACCTTCATCTACGCACCTTAAGTATCCAAACAAAATAGTTGGTGTACTAACGATGTGCATTATGGGATGGGAGGGAGGACAGGGGAAAGGGGAAGGAC‑‑‑GGGGGGGGGGG‑GGA‑GGG‑GG‑‑TTagatcggaaga > SRR10918232.342631/1‑140 (MQ=60)
TCGCTTTGACTGCAACCACCTTCATCTACGCACCTTAAGTATCCAAACAAAATAGTTGGTGTACTAACGATGTGCATTATGGGATGGGAGGGAGGACAGGGGAAAGGGGAAGGACG‑‑GGGGGGGGGGC‑GGA‑GGG‑GG‑‑TT‑GGGCAGTTTAGTGT > SRR10918232.2274432/1‑151 (MQ=60)
GCTTTGACTGCAACCACCTTCATCTACGCACCTTAAGTATCCAAACAAAATAGTTGGTGTACTAACGATGTGCATTATGGGATGGGAGGGAGGACAGGGGAAAGGGGAAGGACGGGGGGGGGGGGGC‑GGA‑GGG‑GG‑‑GT‑GGGCAGTTTAGggg > SRR10918232.4494741/1‑148 (MQ=60)
GCTTTGACTGCAACCACCTTCATCTACGCACCTTAAGTATCCAAACAAAATAGTTGGTGTACTAACGATGTGCATTATGGGATGGGAGGGAGGACAGGGGAAAGGGGAAGGACG‑‑GGGGGGGGGGC‑GGA‑GGG‑GG‑‑GT‑GGGCAGTTTAGgggag > SRR10918232.3212206/1‑146 (MQ=60)
GCTTTGACTGCAACCACCTTCATCTACGCACCTTAAGTATCCAAACAAAATAGTTGGTGTACTAACGATGTGCATTATGGGATGGGAGGGAGGACAGGGGAAAGGGGAAGGAC‑‑‑GGGGGGGGGGgggggggggggtgggggggtttggggag > SRR10918232.3199500/1‑123 (MQ=60)
CTTTGACTGCAACCACCTTCATCTACGCACCTTAAGTATCCAAACAAAATAGTTGGTGTACTAACGATGTGCATTATGGGATGGGAGGGAGGACAGGGGAAAGGGGAAGGACG‑‑GGGGGGGGGGC‑GGA‑GGG‑GG‑‑GT‑GGGCCGTTTAGGGTAGG > SRR10918232.4739254/1‑151 (MQ=60)
TTTGACTGCAACCACCTTCATCTACGCACCTTAAGTATCCAAACAAAATAGTTGGTGTACTAACGATGTGCATTATGGGATGGGAGGGAGGACAGGGGAAAGGGGAAGGACG‑‑GGGGGGGGGGG‑GGA‑GGG‑GG‑‑TG‑GGGCAGTTTAGTGGAGGG > SRR10918232.4612728/1‑151 (MQ=60)
TTGACTGCAACCACCTTCATCTACGCACCTTAAGTATCCAAACAAAATAGTTGGTGTACTAACGATGTGCATTATGGGATGGGAGGGAGGACAGGGGAAAGGGGAAGGACG‑‑GGGGGGGGGGC‑GGA‑GGG‑GG‑‑TT‑GGGCAGTTTAGTGTAGGGG > SRR10918232.824695/1‑151 (MQ=60)
ACTGCAACCACCTTCATCTACGCACCTTAAGTATCCAAACAAAATAGTTGGTGTACTAACGATGTGCATTATGGGATGGGAGGGAGGACAGGGGAAAGGGGAAGGACG‑‑GGGGGGGGGGC‑GGA‑GGG‑GG‑‑GT‑GGGCCGGTTAGTGTAGGGGGGG > SRR10918232.2252054/1‑151 (MQ=60)
GCAACCACCTTCATCTACGCACCTTAAGTATCCAAACAAAATAGTTGGTGTACTAACGATGTGCATTATGGGATGGGAGGGAGGACAGGGGAAAGGGGAAGGAC‑‑‑GGGGGGGGGGC‑GGA‑GGG‑GG‑‑TT‑GGGCAGTTTAGTGTAGGGGGGTAGAA > SRR10918232.3775857/1‑151 (MQ=60)
cacccattatacgccaccgaaatgaagccacaaaaatagtggggttgaggataaaggtgttggtgggggggggggggggagggggggggagggggggaggggggggGGGGGGGGGGG‑GGG‑GGG‑GG‑‑TT‑GGGCAGTTTAGTGTAGGGGGGTAG < SRR10918232.141767/45‑1 (MQ=60)
aacacgtgctatgacccaacaaaaagaaaaaaaaaaaagagtggggatgaaagaggttggagaggggggggggggagggggggggggggaggggggggggggggggGGGGGGGGGGG‑GGG‑GGG‑GG‑‑TT‑GGGCAGTTTAGTGTAGGGGGGTAG < SRR10918232.911068/45‑1 (MQ=60)
AACCACCTTCATCTACGCACCTTAAGTATCCAAACAAAATAGTTGGTGTACTAACGATGTGCATTATGGGATGGGAGGGAGGACAGGGGAAAGGGGAAGGACG‑‑GGGGGGGGGGC‑GGA‑GGG‑GG‑‑TT‑GGGCAGGTTAGTGTAGGGGGGGAGAAA > SRR10918232.3630713/1‑151 (MQ=60)
ACCACCTTCATCTACGCACCTTAAGTATTCAAACAAAATAGTTGGTGTACTAACGATGTGCATTATGGGATGGGAGGGAGGACAGGGGAAAGGGGAAGGACG‑‑GGGGGGGGGGC‑GGG‑GGG‑GG‑‑TC‑GGGCCGTTTAGTGTAGGGGGGGAGAAAT > SRR10918232.1708264/1‑151 (MQ=60)
ACCACCTTCATCTACGCACCTTAAGTATCCAAACAAAATAGTTGGTGTACTAACGATGTGCATTATGGGATGGGAGGGAGGACAGGGGAAAGGGGAAGGACG‑‑GGGGGGGGGGC‑GGA‑GGG‑GG‑‑TT‑GGGCAGTTTAGTGTAGGGGGGTAGAAAT > SRR10918232.2487282/1‑151 (MQ=60)
ACCACCTTCATCTACGCACCTTAAGTATCCAAACAAAATAGTTGGTGTACTAACGATGTGCATTATGGGATGGGAGGGAGGACAGGGGAAAGGGGAAGGACG‑‑GGGGGGGGGGC‑GGA‑GGG‑GG‑‑GT‑GGGCAGTTTAGTGTAGGGGGGTAGAAAT > SRR10918232.2487300/1‑151 (MQ=60)
CCACCTTCATCTACGCACCTTAAGTATCCAAACAAAATAGTTGGTGTACTAACGATGTGCATTATGGGATGGGAGGGAGGACAGGGGAAAGGGGAAGGACG‑‑GGGGGGGGGGC‑GGA‑GGG‑GG‑‑TT‑GGGCAGTTTAGTGTAGGGGGGGAGAAATC > SRR10918232.6503873/1‑151 (MQ=60)
CACCTTCATCTACGCACCTTAAGTATCCAAACAAAATAGTTGGTGTACTAACGATGTGCATTATGGGATGGGAGGGAGGACAGGGGAAAGGGGAAGGACG‑‑GGGGGGGGGGC‑GGA‑GGG‑GG‑‑TT‑GGGCAGTTTAGTGTAGGGGGGTAGAAATCA > SRR10918232.5380840/1‑151 (MQ=60)
cctctaactacgacaaataataaaaaaaaaaaagaggggtggtaataaagggtgggtatgggggggggggggggagggggggggggggggggggggggggGGGGGGGGGGG‑GGG‑GGG‑GG‑‑TT‑GGGCAGTTTAGTGTAGGGGGGTAGAAATCA < SRR10918232.4118168/51‑1 (MQ=60)
cccctagaacgaaaaaaaataaaaaaaaaaaagtggggttgcgagccgggggtgtgagggggggggggggggggagggggggggggggggggggggggGGGGGGGGGGG‑GGG‑GGG‑GG‑‑TT‑GGGCAGTTTAGTGTAGGGGGGTAGAAATCACC < SRR10918232.3557943/53‑1 (MQ=60)
gtgggggtgggtctgtggggtgggggttggggggggggtctggttcgggtggtggtgggggggggggggggggggggggggggggggggggggggggGGGGGGGGGGG‑GGG‑GGG‑GG‑‑TT‑GGGCAGTTTAGTGTAGGGGGGTAGAAATCACCG < SRR10918232.6445235/54‑1 (MQ=60)
ctcacccccccgtattaaataacaaaaaaaagttggtggtaagcaggatgtttttagtggggggggggggggaggggaggggaaggggggaggggggGGGGGGGGGGG‑GGG‑GGG‑GG‑‑TG‑GGGCAGTTTAGTGTAGGGGGGTAGAAATCACCG < SRR10918232.5759821/54‑1 (MQ=54)
TCATCTACGCACCTTAAGTATCCAAACAAAATAGTTGGTGTACTAACGATGTGCATTATGGGATGGGAGGGAGGACAGGGGAAAGGGGAAGGACG‑‑GGGGGGGGGGC‑GGG‑GGG‑GG‑‑TT‑GGGCAGTTTAGTGTAGGGGGGTAGAAATCACCGCC > SRR10918232.2616491/1‑151 (MQ=60)
caaagagcggaacaaaaagaagaaaaagaaggggggggggaagggggggttggtgtggggggggggggggggggggggggggggggggggggggggGGGGGGGGGGG‑GGG‑GGG‑GG‑‑TG‑GGGCAGTTTAGTGTAGGGGGGTAGAAATCACCGC < SRR10918232.6440727/55‑1 (MQ=57)
agcggacacgcaataaagcagaaagaaaaaggtgggagaccaaggatggggtaggggggggggggggggggggagaggaaggggggaggggggGGGGGGGGGGA‑GGG‑GGG‑GG‑‑TT‑GGGCAGTTTAGTGTAGGGGGGTAGAAATCACCGCCTC < SRR10918232.6051121/58‑1 (MQ=60)
ACGCACCTTAAGTATCCAAACAAAATAGTTGGTGTACTAACGATGTGCATTATGGGATGGGAGGGAGGACAGGGGAAAGGGGAAGGACGGGGGGGGGGGGGG‑GGG‑GGG‑GG‑‑GG‑GGGGGGTTTAGGGTAGGGGGGGAGAAATCACCGCCCCGG > SRR10918232.3963030/1‑151 (MQ=60)
AAGTATCCAAACAAAATAGTTGGTGTACTAACGATGTGCATTATGGGATGGGAGGGAGGACAGGGGAAAGGGGAAGGACG‑‑GGGGGGGGGGC‑GGA‑GGG‑GG‑‑TT‑GGGCAGTTTAGTGTAGGGGGGTAGAAATCACCGCCTCGGCGGCGTGGTCG > SRR10918232.2053481/1‑151 (MQ=60)
AAGTATCCAAACAAAATAGTTGGTGTACTAACGATGTGCATTATGGGATGGGAGGGAGGACAGGGGAAAGGGGAAGGACG‑‑GGGGGGGGGGC‑GGA‑GGG‑GG‑‑TT‑GGGCAGTTTAGTGTAGGGGGGTAGAAATCACCGCCTCGGCGGCGTGGTCG > SRR10918232.5944464/1‑151 (MQ=60)
AGTATCCAAACAAAATAGTTGGTGTACTAACGATGTGCATTATGGGATGGGAGGGAGGACAGGGGAAAGGGGAAGGACG‑‑GGGGGGGGGGC‑GGA‑GGG‑GG‑‑TT‑GGGCAGTTTAGTGTGGGGGGGTAGAAATAACCGCCTCGGCGGCGTGGTCGG > SRR10918232.5289917/1‑151 (MQ=60)
AGTATCCAAACAAAATAGTTGGTGTACTAACGATGTGCATTATGGGATGGGAGGGAGGACAGGGGAAAGGGGAAGGACG‑‑GGGGGGGGGGC‑GGA‑GGG‑GG‑‑TT‑GGGCAGTTTAGTGTAGGGGGGTAGAAATCACCGCCTCGGCGGCGGGGTCGG > SRR10918232.5853518/1‑151 (MQ=60)
aaaaaaaaaaagtgtgtggtaatgaaggggggtaggggggggggggggggggggggggggggggggggggggggggGGGGGGGGGGG‑GGG‑GGG‑GG‑‑TTGGGGCAGTTTAGTGTAGGGGGGTAGAAATCACCttcctccccccaaaaaagcgc < SRR10918232.4207733/75‑22 (MQ=44)
acaaaaaagagtgttggtgaagtaggagggtggataggggggggggggggggggggggggaagggggggggggggGGGGGGGGGGG‑GGG‑GGG‑GG‑‑TT‑GGGCAGTTTAGTGTAGGGGGGTAGAAATCACCGCCTCGGCGGCGTGGTCGGTTCC < SRR10918232.691614/76‑1 (MQ=60)
CAAACAAAATAGTTGGTGTACTAACGATGTGCATTATGGGATGGGAGGGAGGACAGGGGAAAGGGGAAGGACG‑‑GGGGGGGGGGC‑GGA‑GGG‑GG‑‑GT‑GGGCAGTTTAGTGTAGGGGGGGAGAAATCACCGCCTCGGCGGCGTGGTCGGTTCCGA > SRR10918232.3309560/1‑151 (MQ=60)
CAAACAAAATAGTTGGTGTACTAACGATGTGCATTATGGGATGGGAGGGAGGACAGGGGAAAGGGGAAGGAC‑‑‑GGGGGGGGGGC‑GGA‑GGG‑GG‑‑TT‑GGGCAGTTTAGTGTAGGGGGGTAGAAATCACCGCCTCGGCGGCGTGGTCGGTTCCGAT > SRR10918232.587325/1‑151 (MQ=60)
gcaaaaaaaagaggggggatcaaaattgtgggtgcttgggggggggggggggaagccgggggagggggggggggGGGGGGGGGGCGGGG‑GGG‑GG‑‑TT‑GGGGAGTTTAGTGTAGGGGGGTAGAAATCACCGCCTCGGCGGCGTGGTCGGTTCC < SRR10918232.5447625/77‑1 (MQ=60)
caaaagttcagatagttgtcacaggatggggtctgcggggggggggggggagagggggaggggggggcgaggggGGGGGGGGGGC‑GGG‑GGG‑GGGTTT‑GGGAAGTTTAGTGTAGGGGGGTAGAAATCACCGCCTCGGCGGCGTGGTCGGTTC < SRR10918232.2311007/77‑1 (MQ=60)
AAACAAAATAGTTGGTGTACTAACGATGTGCATTATGGGATGGGAGGGAGGACAGGGGAAAGGGGAAGGAC‑‑‑GGGGGGGGGGC‑GGA‑GGG‑GG‑‑TT‑GGGCAGTTTAGTGTAGGGGGGTAGAAATCACCGCCTCGGCGGCGTGGTCGGTTCCGATC > SRR10918232.3689145/1‑151 (MQ=60)
aatggtgggtggtgaaacgaggggtgataggggggggggagggggggagggggaggggggaggggggggggGGGGGGGGGGG‑GGG‑GGG‑GG‑‑TG‑GGGCAGTTTAGTGTAGGGGGGTAGAAATCACCGCCTCGGCGGCGTGGTCGGTTCCGATC < SRR10918232.3036353/80‑1 (MQ=60)
CAAAATAGTTGGTGTACTAACGATGTGCATTATGGGATGGGAGGGAGGACAGGGGAAAGGGGAAGGACG‑‑GGGGGGGGGGC‑GGA‑GGG‑GG‑‑TT‑GGGCAGTTTAGTGTAGGGGGGTAGAAATCACCGCCTCGGCGGCGTGGTCGGTTCCGGTCAC > SRR10918232.997676/1‑151 (MQ=60)
AAAATAGTTGGTGTACTAACGATGTGCATTATGGGATGGGAGGGAGGACAGGGGAAAGGGGAAGGAC‑‑‑GGGGGGGGGGC‑GGA‑GGG‑GG‑‑TT‑GGGCAGGTTAGTGTAGGGGGGTAGAAATCACCGCCTCGGCGGCGTGGTCGGTTCCGATCACCA > SRR10918232.3150305/1‑151 (MQ=60)
AAAATAGTTGGTGTACTAACGATGTGCATTATGGGATGGGAGGGAGGACAGGGGAAAGGGGAAGGAC‑‑‑GGGGGGGGGGC‑GGA‑GGG‑GG‑‑TT‑GGGCAGGTTAGTGTAGGGGGGGAGAAATCACCGCCTCGGCGGCGTGGTCGGTTCCGATCACCA > SRR10918232.3155356/1‑151 (MQ=60)
tggtggtgaaagaagagtggtgatgggggggggggggggggggaggggggggggggggggggggggGGGGGGGGGGG‑GGG‑GGG‑GT‑‑TT‑GGGCAGTTTAGTGTAGGGGGGTAGAAATCACCGCCTCGGCGGCGTGGTCGGTTCCGATCACCAG < SRR10918232.6118085/85‑1 (MQ=60)
AGTTGGTGTACTAACGATGTGCATTATGGGATGGGAGGGAGGACAGGGGAAAGGGGAAGGACG‑‑GGGGGGGGGGC‑GGA‑GGG‑GG‑‑GT‑GGGCAGTTTAGGGTAGGGGGGGAGAAATCACCGCCTCGGCGGCGTGGTCGGTTCCGATCACCAGACC > SRR10918232.5554528/1‑151 (MQ=60)
GTTGGTGTACTAACGATGTGCATTATGGGATGGGAGGGAGGACAGGGGAAAGGGGAAGGACG‑‑GGGGGGGGGGC‑GGA‑GGG‑GG‑‑TT‑GGGCAGTTTAGTGTAGGGGGGTAGAAATCACCGCCTCGGCGGCGTGGTCGGTTCCGATCACCAGACCT > SRR10918232.3367415/1‑151 (MQ=60)
GTGTACTAACGATGTGCATTATGGGATGGGAGGGAGGACAGGGGAAAGGGGAAGGACG‑‑GGGGGGGGGGC‑GGA‑GGG‑GG‑‑TT‑GGGCAGTTTAGTGTAGGGGGGTAGAAATCACCGCCTCGGCGGCGTGGTCGGTTCCGATCACCAGACCTGCGC > SRR10918232.736593/1‑151 (MQ=60)
TGTACTAACGATGTGCATTATGGGATGGGAGGGAGGACAGGGGAAAGGGGAAGGACG‑‑GGGGGGGGGGC‑GGA‑GGG‑GG‑‑TT‑GGGCAGTTTAGTGTAGGGGGGGAGAAATCACCGCCTCGGCGGCGTGGGCGGTTCCGATCACCAGACCTGCGCG > SRR10918232.4861350/1‑151 (MQ=60)
gggaaagggggggtgatttggtggggggggggggaggacgggggagggggggggggggGGGGGGGGGGG‑GGG‑GGG‑GG‑‑TT‑GGGCAGTTTAGTGTAGGGGGGTAGAAATCACCGCCTCGGCGGCGTGGTCGGTTCCGATCACCAGACCTGCGC < SRR10918232.4648636/93‑1 (MQ=60)
TACTAACGATGTGCATTATGGGATGGGAGGGAGGACAGGGGAAAGGGGAAGGAC‑‑‑GGGGGGGGGGC‑GGA‑GGG‑GG‑‑TT‑GGGCAGTTTAGTGTAGGGGGGTAGAAATCACCGCCTCGGCGGCGTGGTCGGTTCCGATCACCAGACCTGCGCGAGC > SRR10918232.5263183/1‑151 (MQ=60)
gaggaagggggggtgaggggggggggggggggggggagggggggggggggggggggGGGGGGGGGGG‑GGG‑GGG‑GG‑‑TG‑GGGGAGTTTAGTGTGGGGGGGTAGAAATCACCGCCTCGGCGGCGTGGTCGGTTCCGATCACCAGACCTGCGCGA < SRR10918232.3680783/95‑1 (MQ=60)
ggtgtggagtgatgagggggggggggggaagggggggggagaagggggggaggggGGGGGGGGGGG‑GGG‑GGG‑GG‑‑TG‑GGGAAGTTTAGTGTAGGGGGGTAGAAATCACCGCCTCGGCGGCGTGGTCGGTTCCGATCACCAGACCTGCGCGAG < SRR10918232.5423612/96‑1 (MQ=60)
CTAACGATGTGCATTATGGGATGGGAGGGAGGACAGGGGAAAGGGGAAGGACG‑‑GGGGGGGGGGC‑GGA‑GGG‑GG‑‑TT‑GGGCAGTTTAGTGTAGGGGGGGAGAAATCACCGCCTCGGCGGCGTGGTCGGTTCCGATCACCAGACCTGCGCGAGCG > SRR10918232.4977929/1‑151 (MQ=60)
CTAACGATGTGCATTATGGGATGGGAGGGAGGACAGGGGAAAGGGGAAGGACG‑‑GGGGGGGGGGC‑GGA‑GGG‑GG‑‑GT‑GGGCAGTTTAGGGTAGGGGGGTAGAAATCACCGCCTCGGCGGCGTGGTCGGTTCCGATCACCAGACCTGCGCGAGCG > SRR10918232.3543425/1‑151 (MQ=60)
AACGATGTGCATTATGGGATGGGAGGGAGGACAGGGGAAAGGGGAAGGAC‑‑‑GGGGGGGGGGC‑GGA‑GGG‑GG‑‑TT‑GGGCAGTTTAGTGTAGGGGGGTAGAAATCACCGCCTCGGCGGCGTGGTCGGTTCCGATCACCAGACCTGCGCGAGCGCCA > SRR10918232.5171601/1‑151 (MQ=60)
ACGATGTGCATTATGGGATGGGAGGGAGGACAGGGGAAAGGGGAAGGAC‑‑‑GGGGGGGGGGC‑GGA‑GGG‑GG‑‑TT‑GGGCAGTTTAGTGTAGGGGGGTAGAAATCACCGCCTCGGCGGCGTGGTCGGTTCCGATCACCAGACCTGCGCGAGCagatc > SRR10918232.5230237/1‑146 (MQ=60)
ACGATGTGCATTATGGGATGGGAGGGAGGACAGGGGAAAGGGGAAGGAC‑‑‑GGGGGGGGGGC‑GGA‑GGG‑GG‑‑TT‑GGGCAGTTTAGTGTAGGGGGGTAGAAATCACCGCCTCGGCGGCGTGGTCGGTTCCGATCACCAGACCTGCGCGAGCGCCAG > SRR10918232.5660529/1‑151 (MQ=60)
gggtgggtgagggaggggggggggggggagaggggggggagggggggggggGGGGGGGGGGG‑GGAGGGG‑GG‑‑TT‑GGGCAGTTTAGTGTAGGGGGGTAGAAATCACCGCCTCGGCGGCGTGGTCGGTTCCGATCACCAGACCTGCGCGAGCGC < SRR10918232.2945780/100‑1 (MQ=60)
ggggggggggggggggggggggggggggggggggggggggggggggggggGGGGGGGGGGG‑GGG‑GGG‑GG‑‑TT‑GGGCAGTTTAGTGTAGGGGGGTAGAAATCACCGCCTCGGCGGCGTGGTCGGTTCCGATCACCAGACCTGCGCGAGCGCCA < SRR10918232.4219474/101‑1 (MQ=60)
gtgtgaaaagagggggagggggggagggggggggagggggggaggggggGGGGGGGGGGG‑GGG‑GGG‑GT‑‑TT‑GGGCAGTTTAGTGTAGGGGGGTAGAAATCACCGCCTCGGCGGCGTGGTCGGTTCCGATCACCAGACCTGCGCGAGCGCCAG < SRR10918232.353773/102‑1 (MQ=60)
gtggtatgtgagggggggcgggggaggaaggagagagggggggggggggGGGGGGGGGGC‑GG‑‑GGG‑GG‑‑TG‑GGGCAGTTTAGTGTAGGGGGGTAGAAATCACCGCCTCGGCGGCGTGGTCGGTTCCGATCACCAGACCTGCGCGAGCGCCAGC < SRR10918232.2788077/102‑1 (MQ=60)
ATGTGCATTATGGGATGGGAGGGAGGACAGGGGAAAGGGGAAGGACG‑‑GGGGGGGGGGC‑GGA‑GGG‑GG‑‑TT‑GGGCAGTTTAGTGTAGGGGGGGAGAAATCACCGCCTCGGCGGCGTGGTCGGTTCCGATCACCAGACCTGCGCGAGCGCCAGCG > SRR10918232.1766623/1‑151 (MQ=60)
gggggattgggggggggggggggggggaggggaggggggggggggggGGGGGGGGGGG‑GGG‑GGG‑GG‑‑TT‑GGGCAGTTTAGTGTAGGGGGGTAGAAATCACCGCCTCGGCGGCGTGGTCGGTTCCGATCACCAGACCTGCGCGAGCGCCAGCG < SRR10918232.71187/104‑1 (MQ=60)
GTGCATTATGGGATGGGAGGGAGGACAGGGGAAAGGGGAAGGACG‑‑GGGGGGGGGGC‑GGA‑GGG‑GG‑‑TT‑GGGCAGGTTAGTGTAGGGGGGTAGAAATCACCGCCTCGGCGGCGGGGTCGGTTCCGATCACCAGACCTGCGCGAGCGCCAGCGAG > SRR10918232.3363628/1‑151 (MQ=60)
GCATTATGGGATGGGAGGGAGGACAGGGGAAAGGGGAAGGACG‑‑GGGGGGGGGGC‑GGA‑GGG‑GG‑‑TT‑GGGCAGTTTAGTGTAGGGGGGTAGAAATCACCGCCTCGGCGGCGTGGGCGGTTCCGATCACCAGACCTGCTCGAGCGCCAGCGATGG > SRR10918232.6218472/1‑151 (MQ=60)
gtgtgtggggggggggggggagaggggggaagggggggggggggGGGGGGGGGGG‑GGG‑GGG‑GG‑‑TT‑GGGCAGTTTAGTGTAGGGGGGTAGAAATCACCGCCTCGGCGGCGTGGTCGGTTCCGATCACCAGACCTGCGCGAGCGCCAGCGATG < SRR10918232.739113/107‑1 (MQ=60)
ATTATGGGATGGGAGGGAGGACAGGGGAAAGGGGAAGGACG‑‑GGGGGGGGGGC‑GGA‑GGG‑GG‑‑TT‑GGGCAGTTTAGTGTAGGGGGGTAGAAATCACCGCCTCGGCGGCGTGGTCGGTTCCGATCACCAGACCTGCGCGAGCGCCAGCGATGGTG > SRR10918232.4265317/1‑151 (MQ=60)
TTATGGGATGGGAGGGAGGACAGGGGAAAGGGGAAGGACG‑‑GGGGGGGGGGC‑GGA‑GGG‑GG‑‑TT‑GGGCAGTTTAGTGTAGGGGGGTAGAAATCACCGCCTCGGCGGCGTGGTCGGTTCCGATCACCAGACCTGCGCGAGCGCCAGCGATGGTGT > SRR10918232.693938/1‑151 (MQ=60)
aggagggtgggggcacggaggggggcgcggggaagggggggcGGGGGGGGC‑GGG‑GGG‑GGT‑TT‑GGGCAGTTTAGTCTAGGGGGGTAGAAATCACCGCCTCGGCGGCGTGGTCGGTTCCGATCACCAGACCTGCGCGAGCGCCAGCGATGGTG < SRR10918232.5716580/109‑1 (MQ=60)
ATGGGATGGGAGGGAGGACAGGGGAAAGGGGAAGGAC‑‑‑GGGGGGGGGGC‑GGA‑GGG‑GG‑‑TT‑GGGCAGTTTAGTGTAGGGGGGTAGAAATCACCGCCTCGGCGGCGTGGTCGGTTCCGATCACCAGACCTGCGCGAGCGCCAGCGATGGTGTACT > SRR10918232.6205957/1‑151 (MQ=60)
GGGATGGGAGGGAGGACAGGGGAAAGGGGAAGGACG‑‑GGGGGGGGGGC‑GGA‑GGG‑GG‑‑TT‑GGGCAGTTTAGTGTAGGGGGGTAGAAATCACCGCCTCGGCGGCGTGGTCGGTTCCGATCACCAGACCTGCGCGAGCGCCAGCGATGGTGTCCTG > SRR10918232.4425342/1‑151 (MQ=60)
ggggtggggggggggggggggggggggggggggggggGGGGGGGGGGG‑GGG‑GGG‑GG‑‑TT‑GGGCAGTTTAGTGTAGGGGGGTAGAAATCACCGCCTCGGCGGCGTGGTCGGTTCCGATCACCAGACCTGCGCGAGCGCCAGCGATGGTGTACT < SRR10918232.5162900/114‑1 (MQ=60)
gggggggggggggggggggggaggggggaggggggggGGGGGGGGGGG‑GGG‑GGG‑GG‑‑TT‑GGGCAGTTTAGTGTAGGGGGGTAGAAATCACCGCCTCGGCGGCGTGGTCGGTTCCGATCACCAGACCTGCGCGAGCGCCAGCGATGGTGTACT < SRR10918232.4137612/114‑1 (MQ=60)
GGGAGGGAGGACAGGGGAAAGGGGAAGGACG‑‑GGGGGGGGGGC‑GGA‑GGG‑GG‑‑TT‑GGGCAGTTTAGTGTAGGGGGGTAGAAATCACCGCCTCGGCGGCGTGGTCGGTTCCGATCACCAGACCTGCGCGAGCGCCAGCGATGGTGTACTGGGCGA > SRR10918232.2482947/1‑151 (MQ=60)
GGAGGGAGGACAGGGGAAAGGGGAAGGACG‑‑GGGGGGGGGGC‑GGA‑GGG‑GG‑‑TT‑GGGCAGTTTAGTGTAGGGGGGTAGAAATCACCGCCTCGGCGGCGTGGTCGGTTCCGATCACCAGACCTGCGCGAGCGCCAGCGATGGTGTACTGGGCGAC > SRR10918232.3325294/1‑151 (MQ=60)
ggggggggggggaggggggggggggggGGGGGGGGGGG‑GGG‑GGG‑GG‑‑TT‑GGGAAGTTTGGTGTAGGGGGGTAGAAATCACCGCCTCGGCGGCGTGGTCGGTTCCGATCACCAGACCTGCGCGAGCGCCAGCGATGGTGTACTGGGCGACCAT < SRR10918232.3267163/124‑1 (MQ=60)
ggggggggggggggggggggggggggGGGGGGGGGGG‑GGG‑GGG‑GG‑‑TG‑GGGCAGTTTAGTGTAGGGGGGTAGAAATCACCGCCTCGGCGGCGTGGTCGGTTCCGATCACCAGACCTGCGCGAGCGCCAGCGATGGTGTACTGGGCGACCATC < SRR10918232.3045402/125‑1 (MQ=60)
AGGACAGGGGAAAGGGGAAGGAC‑‑‑GGGGGGGGGGC‑GGA‑GGG‑GG‑‑TT‑GGGCAGTTTAGTGTAGGGGGGTAGAAATCACCGCCTCGGCGGCGTGGTCGGTTCCGATCACCAGACCTGCGCGAGCGCCAGCGATGGTGTACTGGGCGACCATCCGG > SRR10918232.652900/1‑151 (MQ=60)
ggaggggggggggggggggggggggGGGGGGGGGGG‑GGG‑GGG‑GG‑‑TT‑GGGCAGTTTAGTGTAGGGGGGTAGAAATCACCGCCTCGGCGGCGTGGTCGGTTCCGATCACCAGACCTGCGCGAGCGCCAGCGATGGTGTACTGGGCGACCATCC < SRR10918232.3671660/126‑1 (MQ=60)
agagggaggagaggaggggggggggGGGGGGGGGGG‑GGG‑GGG‑GG‑‑TT‑GGGCAGTTTAGTGTAGGGGGGTAGAAATCACCGCCTCGGCGGCGTGGTCGGTTCCGATCACCAGACCTGCGCGAGCGCCAGCGATGGTGTACTGGGCGACCATCC < SRR10918232.2885922/126‑1 (MQ=60)
ggggggggggggggggggggGGGGGGGGGGG‑GGG‑GGG‑GG‑‑TG‑GGGCAGTTTAGTGTAGGGGGGTAGAAATCACCGCCTCGGCGGCGTGGTCGGTTCCGATCACCAGACCTGCGCGAGCGCCAGCGATGGTGTACTGGGCGACCATCCGGGTG < SRR10918232.3905493/131‑1 (MQ=60)
GGGAAAGGGGAAGGACG‑‑GGGGGGGGGGC‑GGG‑GGG‑GG‑‑TT‑GGGCAGTTTAGTGTAGGGGGGAAGAAATCACCGCCTCCGCGGCGTGGGCGGTTCCGATCACCAGACCTGCCCGAGCGCCAGCGATGGTGGACTGGGCGACCATCCGGGagcgg > SRR10918232.3735523/1‑146 (MQ=60)
AAGGGGAAGGACG‑‑GGGGGGGGGGC‑GGA‑GGG‑GG‑‑TT‑GGGCAGTTTAGGGTAGGGGGGTAGAAATCACCGCCTCGGCGGCGTGGTCGGTTCCGATCACCAGACCTGCGCGAGCGCCAGCGATGGTGTACTGGGCGACCATCCGGGTGCGGGCCT > SRR10918232.5661120/1‑151 (MQ=60)
GGGAAGGACG‑‑GGGGGGGGGGC‑GGA‑GGG‑GG‑‑TT‑GGGCAGTTTAGTGTAGGGGGGTAGAAATCACCGCCTCGGCGGCGTGGTCGGTTCCGATCACCAGACCTGCGCGAGCGCCAGCGATGGTGTACTGGGCGACCATCCGGGTGCGTGCCTTGA > SRR10918232.625487/1‑151 (MQ=60)
gggggggGGGGGGGGGGG‑GGG‑GGG‑GG‑‑TG‑GGGCAGTTTAGTGTAGGGGGGTAGAAATCACCGCCTCGGCGGCGTGGTCGGTTCCGATCACCAGACCTGCGCGAGCGCCAGCGATGGTGTACTGGGCGACCATCCGGGTGCGTGCCTTGACGT < SRR10918232.5515030/144‑1 (MQ=60)
GGACGG‑GGGGGGGGGGC‑GGA‑GGG‑GG‑‑TT‑GGGCAGTTTAGTGTAGGGGGGTAGAAATCACCGCCTCGGCGGCGTGGTCGGTTCCGATCACCAGACCTGCGCGAGCGCCAGCGATGGTGTACTGGGCGACCATCCGGGTGCGTGCCTTGACGTT > SRR10918232.4034102/1‑151 (MQ=60)
GGACG‑‑GGGGGGGGGGC‑GGA‑GGG‑GG‑‑TT‑GGGCAGTTTAGTGTAGGGGGGTAGAAATCACCGCCTCGGCGGCGTGGTCGGTTCCGATCACCAGACCTGCGCGAGCGCCAGCGATGGTGTACTGGGCGACCATCCGGGTGCGTGCCTTGACGTTG > SRR10918232.1015356/1‑151 (MQ=60)
GAG‑‑‑GGGGGGGGGGG‑GGG‑GGG‑GG‑‑TTGGGGCAGTTTAGTGTAGGGGGGTAGAAATCACCGCCTCGGCGGCGTGGTCGGTTCCGATCACCAGACCTGCGCGAGCGCCAGCGATGGTGTACTGGGCGACCATCCGGGTGCGTGCCTTGACGTTGC < SRR10918232.2356964/151‑1 (MQ=60)
AC‑‑‑GGGGGGGGGGC‑GGA‑GGG‑GG‑‑TT‑GGGCAGTTTAGTGTAGGGGGGTAGAAATCACCGCCTCGGCGGCGTGGTCGGTTCCGATCACCAGACCTGCGCGAGCGCCAGCGATGGTGTACTGGGCGACCATCCGGGTGCGTGCCTTGACGTTGCCA > SRR10918232.1325342/1‑151 (MQ=60)
acggGGGGGGGGGGC‑GGA‑GGG‑GG‑‑TT‑GGGCAGTTTAGGGTAGGGGGGTAGAAATCACCGCCTCGGCGGCGTGGTCGGTTCCGATCACCAGACCTGCGCGAGCGCCAGCGATGGTGTACTGGGCGACCATCCGGGGGCGTGCCTTGACGTTGC > SRR10918232.1470739/5‑151 (MQ=60)
G‑‑‑GGGGGGGGGGG‑GGG‑GGG‑GG‑‑TT‑GGGCAGTTTAGTGTAGGGGGGTAGAAATCACCGCCTCGGCGGCGTGGTCGGTTCCGATCACCAGACCTGCGCGAGCGCCAGCGATGGTGTACTGGGCGACCATCCGGGTGCGTGCCTTGACGTTGCCAA < SRR10918232.518090/151‑1 (MQ=60)
G‑‑‑GGGGGGGGGGG‑GGG‑GGG‑GG‑‑TT‑GGGCAGTTTAGTGTAGGGGGGTAGAAATCACCGCCTCGGCGGCGTGGTCGGTTCCGATCACCAGACCTGCGCGAGCGCCAGCGATGGTGTACTGGGCGACCATCCGGGTGCGTGCCTTGACGTTGCCAA < SRR10918232.3446180/151‑1 (MQ=60)
G‑‑‑GGGGGGGGGGG‑GGG‑GGG‑GG‑‑TG‑GGGCAGTTTAGTGTAGGGGGGTAGAAATCACCGCCTCGGCGGCGTGGTCGGTTCCGATCACCAGACCTGCGCGAGCGCCAGCGATGGTGTACTGGGCGACCATCCGGGTGCGTGCCTTGACGTTGCCAA < SRR10918232.519002/151‑1 (MQ=60)
acgGGGGGGGGGGC‑GGA‑GGG‑GG‑‑TT‑GGGCAGTTTAGTGTAGGGGGGTAGAAATCACCGCCTCGGCGGCGTGGTCGGTTCCGATCACCAGACCTGCGCGAGCGCCAGCGATGGTGTACTGGGCGACCATCCGGGTGCGTGCCTTGACGTTGCC > SRR10918232.6021519/4‑151 (MQ=60)
ggGGGGGGGGGGT‑GGA‑GGGTGG‑‑TT‑GGTCAGTTTAGTGTAGGGGGGTAGAAATCACCGCCTCGGCGGCGTGGTCGGTTCCGATCACCAGACCTGCGCGAGCGCCAGCGATGGTGTACTGGGCGACCATCCGGGTGCGTGCCTTGACGTTGCC < SRR10918232.977704/149‑1 (MQ=60)
cgGGGGGGGGGGC‑GGA‑GGG‑GG‑‑TT‑GGGCAGTTTAGTGTAGGGGGGTAGAAATCACCGCCTCGGCGGCGTGGTCGGTTCCGATCACCAGACCTGCGCGAGCGCCAGCGATGGTGTACTGGGCGACCATCCGGGTGCGTGCCTTGACGTTGCCA > SRR10918232.3297298/3‑151 (MQ=60)
GGGGGGGGGG‑‑‑‑‑‑GGG‑GG‑‑TT‑GGGCAGTTTAGTGTAGGGGGGTAGAAATCACCGCCTCGGCGGCGTGGTCGGTTCCGATCACCAGACCTGCGCGAGCGCCAGCGATGGTGTACTGGGCGACCATCCGGGTGCGTGCCTTGACGTTGCCAACCACG < SRR10918232.4212012/151‑1 (MQ=60)
GGGGGGGG‑GGG‑GGG‑GG‑‑TT‑GGGCAGTTTAGTGTAGGGGGGTAGAAATCACCGCCTCGGCGGCGTGGTCGGTTCCGATCACCAGACCTGCGCGAGCGCCAGCGATGGTGTACTGGGCGACCATCCGGGTGCGTGCCTTGACGTTGCCAACCAC < SRR10918232.5662962/151‑1 (MQ=60)
GGGGGGGC‑GGA‑GGG‑GG‑‑TT‑GGGCAGTTTAGTGTAGGGGGGTAGAAATCACCGCCTCGGCGGCGTGGTCGGTTCCGATCACCAGACCTGCGCGAGCGCCAGCGATGGTGTACTGGGCGACCATCCGGGTGCGTGCCTTGACGTTGCCAACCAC > SRR10918232.5989469/1‑151 (MQ=60)
GGGGGGGC‑GGA‑GGG‑GG‑‑TT‑GGGCAGTTTAGTGTAGGGGGGTAGAAATCACCGCCTCGGCGGCGTGGTCGGTTCCGATCACCAGACCTGCGCGAGCGCCAGCGATGGTGTACTGGGCGACCATCCGGGTGCGTGCCTTGACGTTGCCAACCAC > SRR10918232.1850287/1‑151 (MQ=60)
GGGGGGGC‑GGA‑GGG‑GG‑‑TT‑GGGCAGTTTAGTGTAGGGGGGTAGAAATCACCGCCTCGGCGGCGTGGTCGGTTCCGATCACCAGACCTGCGCGAGCGCCAGCGATGGTGTACTGGGCGACCATCCGGGTGCGTGCCTTGACGTTGCCAACCAC > SRR10918232.713648/1‑151 (MQ=60)
GGGGGGC‑GGA‑GGG‑GT‑‑TT‑GGGCAGTTTAGTGTAGGGGGGTAGAAATCACCGCCTCGGCGGCGTGGTCGGTTCCGATCACCAGACCTGCGCGAGCGCCAGCGATGGTGTACTGGGCGACCATCCGGGTGCGTGCCTTGACGTTGCCAACCACG < SRR10918232.340563/151‑1 (MQ=60)
GGC‑GGA‑GGG‑GG‑‑TT‑GGGCAGTTTAGTGTAGGGGGGTAGAAATCACCGCCTCGGCGGCGTGGTCGGTTCCGATCACCAGACCTccagcagtaccgcctgcatctggtgcaggttgcaggttttgccggctcgcctgccgtgccttctgtaggc > SRR10918232.6061858/1‑81 (MQ=60)
GC‑GGA‑GGG‑GG‑‑TT‑GGGCAGTTTAGTGTAGGGGGGTAGAAATCACCGCCTCGGCGGCGTGGTCGGTTCCGATCACCAGACCTGCGCGAGCGCCAGCGATGGTGTACTGGGCGACCATCCGGGTGCGTGCCTTGACGTTGCCAACCACGAAGTC > SRR10918232.2770974/1‑151 (MQ=60)
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CAGAATTGCTGAGGTCTAGGGGCTTCGCTTTGACTGCAACCACCTTCATCTACGCACCTTAAGTATCCAAACAAAATAGTTGGTGTACTAACGATGTGCATTATGGGATGGGAGGGAGGACAGGGGAAAGGGGAAGGAC‑‑‑GGGGGGGGGGC‑GGA‑GGG‑GG‑‑TT‑GGGCAGTTTAGTGTAGGGGGGTAGAAATCACCGCCTCGGCGGCGTGGTCGGTTCCGATCACCAGACCTGCGCGAGCGCCAGCGATGGTGTACTGGGCGACCATCCGGGTGCGTGCCTTGACGTTGCCAACCACGAAGTC > CP009974/2790745‑2791043
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
