Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A2 F1 I1 R1
|
404 |
265.1 |
10478538 |
96.8% |
10143224 |
150.7 |
Breseq alignment
N/A
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GGCCGGTGAAACCAGCGCGCCGTACACCCACGACGCACAGGGCGATGACGTCTACCAGGACGCAGGCCAGATCAGTCTGGGCATCACGTCCGCTGTGGATATAGACGGTCACACCTTTGAGAACCTGGAACTGGGTGGTGCTGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGCTGACCGCGACCCCGTCGGTCACCGAAGG‑GGTGGCAGTCAGCTTGGCCACGACTTCGTCGAGGGTGTCGGTCACTTGAACCGAAGCAGCACCACC > CP009974/1897750‑1898031
|
GGCCGGTGAAACCAGCGCGCCGTACACCCACGACGCACAGGGCGATGACGTCTACCAGGACGCAGGCCAGATCAGTCTGGGCATCACGTCCGCTGTGGATATAGACGGTCACACCTTTGAGAACCTGGAACTGGGTGGTGCTGCTTCGGTT > SRR10918231.746179/1‑151 (MQ=8)
GGCCGGTGAAACCAGCGCGCCGTACACCCACGACGCACAGGGCGATGACGTCTACCAGGACGCAGGCCAGATCAGTCTGGGCATCACGTCCGCTGTGGATATAGACGGTCACACCTTTGAGAACCTGGAACTGGGTGGTGCTGCTTCGGTT > SRR10918231.746153/1‑151 (MQ=8)
GGCCGGTGAAACCAGCGCGCCGTACACCCACGACGCACAGGGCGATGACGTCTACCAGGACGCAGGCCAGATCAGTCTGGGCATCACGTCCGCTGTGGATATAGACGGTCACACCTTTGAGAACCTGGAACTGGGTGGTGCTGCTTCGGTT > SRR10918231.702419/1‑151 (MQ=8)
GGCCGGTGAAACCAGCGCGCCGTACACCCACGACGCACAGGGCGATGACGTCTACCAGGACGCAGGCCAGATCAGTCTGGGCATCACGTCCGCTGTGGATATAGACGGTCACACCTTTGAGAACCTGGAACTGGGTGGTGCTGCTTCGGTT > SRR10918231.158707/1‑151 (MQ=8)
GCCGGTGAGACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACCAGGACGCTGGCCAGATCAGTCTGGGCATCACGTCCGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGGAACTGGGCGGTGCTGCTTCGGTTC > SRR10918231.2679254/1‑151 (MQ=4)
GCCGGTGAGACCAGCGCGCCGTACACCCACGACGCACAGGGCGATGACGTCTACCAGGACGCAGGCCAGATCAGTCTGGGCATCACGTCCGCTGTGGATATAGACGGTCACACCTTTGAGAACCTGGAACTGGGTGGTGCTGCTTCGGTTC < SRR10918231.1652877/151‑1 (MQ=5)
GCCGGTGAAACCAGCGCGCCGTACACCCACGACGCACAGGGCGATGACGTCTACCAGGACGCAGGCCAGATCAGTCTGGGCATCACGTCCGCTGTGGATATAGACGGTCACACCTTTGAGAACCTGGAACTGGGTGGTGCTGCTTCGGTTC > SRR10918231.1073105/1‑151 (MQ=8)
GCCGGTGAAACCAGCGCGCCGTACACCCACGACGCACAGGGCGATGACGTCTACCAGGACGCAGGCCAGATCAGTCTGGGCATCACGTCCGCTGTGGATATAGACGGTCACACCTTTGAGAACCTGGAACTGGGTGGTGCTGCTTCGGTTC < SRR10918231.4812943/151‑1 (MQ=8)
GCCGGTGAAACCAGCGCGCCGTACACCCACGACGCACAGGGCGATGACGTCTACCAGGACGCAGGCCAGATCAGTCTGGGCATCACGTCCGCTGTGGATATAGACGGTCACACCTTTGAGAACCTGGAACTGGGTGGTGCTGCTTCGGTTC > SRR10918231.2089961/1‑151 (MQ=8)
GCCGGTGAAACCAGCGCGCCGTACACCCACGACGCACAGGGCGATGACGTCTACCAGGACGCAGGCCAGATCAGTCTGGGCATCACGTCCGCTGTGGATATAGACGGTCACACCTTTGAGAACCTGGAACTGGGTGGTGCTGCTTCGGTTC < SRR10918231.367928/151‑1 (MQ=8)
GCCGGTGAAACCAGCGCGCCGTACACCCACGACGCACAGGGCGATGACGTCTACCAGGACGCAGGCCAGATCAGTCTGGGCATCACGTCCGCTGTGGATATAGACGGTCACACCTTTGAGAACCTGGAACTGGGTGGTGCTGCTTCGGTTC > SRR10918231.595339/1‑151 (MQ=8)
CCGGTGAAACCAGCGCGCCGTACACCCACGACGCACAGGGCGATGACGTCTACCAGGACGCAGGCCAGATCAGTCTGGGCATCACGTCCGCTGTGGATATAGACGGTCACACCTTTGAGAACCTGGAACTGGGTGGTGCTGCTTCGGTTCA > SRR10918231.867043/1‑151 (MQ=8)
CGGTGAAACCAGCGCGCCGTACACCCACGACGCACAGGGCGATGACGTCTACCAGGACGCAGGCCAGATCAGTCTGGGCATCACGTCCGCTGTGGATATAGACGGTCACACCTTTGAGAACCTGGAACTGGGTGGTGCTGCTTCGGTTCAA > SRR10918231.2658286/1‑151 (MQ=6)
CGGTGAAACCAGCGCGCCGTACACCCACGACGCACAGGGCGATGACGTCTACCAGGACGCAGGCCAGATCAGTCTGGGCATCACGTCCGCTGTGGATATAGACGGTCACACCTTTGAGAACCTGGAACTGGGTGGTGCTGCTTCGGTTCAA > SRR10918231.3479773/1‑151 (MQ=6)
CGGTGAAACCAGCGCGCCGTACACCCACGACGCACAGGGCGATGACGTCTACCAGGACGCAGGCCAGATCAGTCTGGGCATCACGTCCGCTGTGGATATAGACGGTCACACCTTTGAGAACCTGGAACTGGGTGGTGCTGCTTCGGTTCAA > SRR10918231.4087429/1‑151 (MQ=6)
CGGTGAAACCAGCGCGCCGTACACCCACGACGCACAGGGCGATGACGTCTACCAGGACGCAGGCCAGATCAGTCTGGGCATCACGTCCGCTGTGGATATAGACGGTCACACCTTTGAGAACCTGGAACTGGGTGGTGCTGCTTCGGTTCAA > SRR10918231.4496758/1‑151 (MQ=6)
GGTGAGACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACCAGGACGCTGGCCAGATCAGTCTGGGCATCACGTCCGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGGAACTGGGCGGTGCTGCTTCGGTTCAAG < SRR10918231.625064/151‑1 (MQ=0)
GGTGAAACCAGCGCGCCGTACACCCACGACGCACAGGGCGATGACGTCTACCAGGACGCAGGCCAGATCAGTCTGGGCATCACGTCCGCTGTGGATATAGACGGTCACACCTTTGAGAACCTGGAACTGGGTGGTGCTGCTTCGGTTCAAG > SRR10918231.3630949/1‑151 (MQ=3)
GGTGAAACCAGCGCGCCGTACACCCACGACGCACAGGGCGATGACGTCTACCAGGACGCAGGCCAGATCAGTCTGGGCATCACGTCCGCTGTGGATATAGACGGTCACACCTTTGAGAACCTGGAACTGGGTGGTGCTGCTTCGGTTCAAG > SRR10918231.5093197/1‑151 (MQ=3)
GGTGAAACCAGCGCGCCGTACACCCACGACGCACAGGGCGATGACGTCTACCAGGACGCAGGCCAGATCAGTCTGGGCATCACGTCCGCTGTGGATATAGACGGTCACACCTTTGAGAACCTGGAACTGGGTGGTGCTGCTTCGGTTCAAG > SRR10918231.3291543/1‑151 (MQ=3)
GGTGAAACCAGCGCGCCGTACACCCACGACGCACAGGGCGATGACGTCTACCAGGACGCAGGCCAGATCAGTCTGGGCATCACGTCCGCTGTGGATATAGACGGTCACACCTTTGAGAACCTGGAACTGGGTGGTGCTGCTTCGGTTCAAG > SRR10918231.3907457/1‑151 (MQ=3)
GGTGAAACCAGCGCGCCGTACACCCACGACGCACAGGGCGATGACGTCTACCAGGACGCAGGCCAGATCAGTCTGGGCATCACGTCCGCTGTGGATATAGACGGTCACACCTTTGAGAACCTGGAACTGGGTGGTGCGGCTTCGGTTCAAG > SRR10918231.3230283/1‑151 (MQ=3)
GTGAAACCAGCGCGCCGTACACCCACGACGCACAGGGCGATGACGTCTACCAGGACGCAGGCCAGATCAGTCTGGGCATCACGTCCGCTGTGGATATAGACGGTCACACCTTTGAGAACCTGGAACTGGGTGGTGCTGCTTCGGTTCAAGT < SRR10918231.1225738/151‑1 (MQ=1)
GTGAAACCAGCGCGCCGTACACCCACGACGCACAGGGCGATGACGTCTACCAGGACGCAGGCCAGATCAGTCTGGGCATCACGTCCGCTGTGGATATAGACGGTCACACCTTTGAGAACCTGGAACTGGGTGGTGCTGCTTCGGTTCAAGT < SRR10918231.2200502/151‑1 (MQ=1)
GTGAAACCAGCGCGCCGTACACCCACGACGCACAGGGCGATGACGTCTACCAGGACGCAGGCCAGATCAGTCTGGGCATCACGTCCGCTGTGGATATAGACGGTCACACCTTTGAGAACCTGGAACTGGGTGGTGCTGCTTCGGTTCAAGT < SRR10918231.4875772/151‑1 (MQ=1)
ctAAACCAGCGCGCCGTACACCCACGACGCACAGGGCGATGACGTCTACCAGGACGCAGGCCAGATCAGTCTGGGCATCACGTCCGCTGTGGATATAGACGGTCACACCTTTGAGAACCTGGAACTGGGTGGTGCTGCTTCGGTTCAAGTG < SRR10918231.3179073/149‑1 (MQ=0)
TGAAACCAGCGCGCCGTACACCCACGACGCACAGGGCGATGACGTCTACCAGGACGCAGGCCAGATCAGTCTGGGCATCACGTCCGCTGTGGATATAGACGGTCACACCTTTGAGAACCTGGAACTGGGTGGTGCTGCTTCGGTTCAAGTG > SRR10918231.2067840/1‑151 (MQ=0)
TGAAACCAGCGCGCCGTACACCCACGACGCACAGGGCGATGACGTCTACCAGGACGCAGGCCAGATCAGTCTGGGCATCACGTCCGCTGTGGATATAGACGGTCACACCTTTGAGAACCTGGAACTGGGTGGTGCTGCTTCGGTTCAAGTG > SRR10918231.2955009/1‑151 (MQ=0)
TGAAACCAGCGCGCCGTACACCCACGACGCACAGGGCGATGACGTCTACCAGGACGCAGGCCAGATCAGTCTGGGCATCACGTCCGCTGTGGATATAGACGGTCACACCTTTGAGAACCTGGAACTGGGTGGTGCTGCTTCGGTTCAAGTG > SRR10918231.3386137/1‑151 (MQ=0)
TGAAACCAGCGCGCCGTACACCCACGACGCACAGGGCGATGACGTCTACCAGGACGCAGGCCAGATCAGTCTGGGCATCACGTCCGCTGTGGATATAGACGGTCACACCTTTGAGAACCTGGAACTGGGTGGTGCTGCTTCGGTTCAAGTG > SRR10918231.3778388/1‑151 (MQ=0)
TGAAACCAGCGCGCCGTACACCCACGACGCACAGGGCGATGACGTCTACCAGGACGCAGGCCAGATCAGTCTGGGCATCACGTCCGCTGTGGATATAGACGGTCACACCTTTGAGAACCTGGAACTGGGTGGTGCTGCTTCGGTTCAAGTG > SRR10918231.400168/1‑151 (MQ=0)
GAGACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACCAGGACGCTGGCCAGATCAGTCTGGGCATCACGTCCGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGGAACTGGGCGGTGCTGCTTCGGTTCAAGTGA < SRR10918231.3118608/151‑1 (MQ=0)
GAAACCAGCGCGCCGTACACCCACGACGCACAGGGCGATGACGTCTACCAGGACGCAGGCCAGATCAGTCTGGGCATCACGTCCGCTGTGGATATAGACGGTCACACCTTTGAGAACCTGGAACTGGGTGGTGCTGCTTCGGTTCAAGTGA < SRR10918231.1910597/151‑1 (MQ=0)
GAAACCAGCGCGCCGTACACCCACGACGCACAGGGCGATGACGTCTACCAGGACGCAGGCCAGATCAGTCTGGGCATCACGTCCGCTGTGGATATAGACGGTCACACCTTTGAGAACCTGGAACTGGGTGGTGCTGCTTCGGTTCAAGTGA > SRR10918231.4915500/1‑151 (MQ=0)
GAAACCAGCGCGCCGTACACCCACGACGCACAGGGCGATGACGTCTACCAGGACGCAGGCCAGATCAGTCTGGGCATCACGTCCGCTGTGGATATAGACGGTCACACCTTTGAGAACCTGGAACTGGGTGGTGCTGCTTCGGTTCAAGTGA < SRR10918231.4369450/151‑1 (MQ=0)
AAACCAGCGCGCCGTACACCCACGACGCACAGGGCGATGACGTCTACCAGGACGCAGGCCAGATCAGTCTGGGCATCACGTCCGCTGTGGATATAGACGGTCACACCTTTGAGAACCTGGAACTGGGTGGTGCTGCTTCGGTTCAAGTGAC > SRR10918231.2379656/1‑151 (MQ=0)
aaccagcgcgccgtacacccacgacgcacagatcggaagagcacacgtctgaactccagtcactggtgaagatctcgtatgccgtcttctgcttgaaaaaaaaaaattaGAGAACCTGGAACTGGGTGGTGCTGCTTCGCTTCAATTGACC > SRR10918231.1445333/110‑151 (MQ=0)
AACCAGCGCGCCGTACACCCACGACGCACAGGGCGATGACGTCTACCAGGACGCAGGCCAGATCAGTCTGGGCATCACGTCCGCTGTGGATATAGACGGTCACACCTTTGAGAACCTGGAACTGGGTGGTGCTGCTTCGGTTCAAGTGACC < SRR10918231.3964472/151‑1 (MQ=0)
AACCAGCGCGCCGTACACCCACGACGCACAGGGCGATGACGTCTACCAGGACGCAGGCCAGATCAGTCTGGGCATCACGTCCGCTGTGGATATAGACGGTCACACCTTTGAGAACCTGGAACTGGGTGGTGCTGCTTCGGTTCAAGTGACC < SRR10918231.2603273/151‑1 (MQ=0)
AACCAGCGCGCCGTACACCCACGACGCACAGGGCGATGACGTCTACCAGGACGCAGGCCAGATCAGTCTGGGCATCACGTCCGCTGTGGATATAGACGGTCACACCTTTGAGAACCTGGAACTGGGTGGTGCTGCTTCGGTTCAAGTGACC > SRR10918231.3187745/1‑151 (MQ=0)
AACCAGCGCGCCGTACACCCACGACGCACAGGGCGATGACGTCTACCAGGACGCAGGCCAGATCAGTCTGGGCATCACGTCCGCTGTGGATATAGACGGTCACACCTTTGAGAACCTGGAACTGGGTGGTGCTGCTTCGGTTCAAGTGACC < SRR10918231.289446/151‑1 (MQ=0)
AACCAGCGCGCCGTACACCCACGACGCACAGGGCGATGACGTCTACCAGGACGCAGGCCAGATCAGTCTGGGCATCACGTCCGCTGTGGATATAGACGGTCACACCTTTGAGAACCTGGAACTGGGTGGTGCTGCTTCGGTTCAAGTGACC < SRR10918231.2905749/151‑1 (MQ=0)
AACCAGCGCGCCGTACACCCACGACGCACAGGGCGATGACGTCTACCAGGACGCAGGCCAGATCAGTCTGGGCATCACGTCCGCTGTGGATATAGACGGTCACACCTTTGAGAACCTGGAACTGGGTGGTGCTGCTTCGGTTCAAGTGACC < SRR10918231.3072675/151‑1 (MQ=0)
ACCAGCGCGCCGTACACCCACGACGCACAGGGCGATGACGTCTACCAGGACGCAGGCCAGATCAGTCTGGGCATCACGTCCGCTGTGGATATAGACGGTCACACCTTTGAGAACCTGGAACTGGGTGGTGCTGCTTCGGTTCAAGTGACCG < SRR10918231.1338054/151‑1 (MQ=0)
ACCAGCGCGCCGTACACCCACGACGCACAGGGCGATGACGTCTACCAGGACGCAGGCCAGATCAGTCTGGGCATCACGTCCGCTGTGGATATAGACGGTCACACCTTTGAGAACCTGGAACTGGGTGGTGCTGCTTCGGTTCAAGTGACCG > SRR10918231.4495488/1‑151 (MQ=0)
CCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACCAGGACGCTGGCCAGATCAGTCTGGGCATCACGTCCGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGGAACTGGGCGGTGCTGCTTCGGTTCAAGTGACCGA > SRR10918231.1611166/1‑151 (MQ=0)
CCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACCAGGACGCTGGCCAGATCAGTCTGGGCATCACGTCCGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGGAACTGGGCGGTGCTGCTTCGGTTCAAGTGACCGA > SRR10918231.3548890/1‑151 (MQ=0)
CCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACCAGGACGCTGGCCAGATCAGTCTGGGCATCACGTCCGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGGAACTGGGCGGTGCTGCTTCGGTTCAAGTGACCGA > SRR10918231.2363421/1‑151 (MQ=0)
CCAGCGCGCCGTACACCCACGACGCACAGGGCGATGACGTCTACCAGGACGCAGGCCAGATCAGTCTGGGCATCACGTCCGCTGTGGATATAGACGGTCACACCTTTGAGAACCTGGAACTGGGTGGTGCTGCTTCGGTTCAAGTGACCGA > SRR10918231.1224729/1‑151 (MQ=0)
CAGCGCGCCGTACACCCACGACGCACAGGGCGATGACGTCTACCAGGACGCAGGCCAGATCAGTCTGGGCATCACGTCCGCTGTGGATATAGACGGTCACACCTTTGAGAACCTGGAACTGGGTGGTGCTGCTTCGGTTCAAGTGACCGAC > SRR10918231.2297422/1‑151 (MQ=0)
ccgatctCGTACACCCACGACGCACAGGGCGATGACGTCTACCAGGACGCAGGCCAGATCAGTCTGGGCATCACGTCCGCTGTGGATATAGACGGTCACACCTTTGAGAACCTGGAACTGGGTGGTGCTGCTTCGGTTCAAGTGACCGACA < SRR10918231.1075982/144‑1 (MQ=0)
AGCGCGCCGTACACCCACGACGCACAGGGCGATGACGTCTACCAGGACGCAGGCCAGATCAGTCTGGGCATCACGTCCGCTGTGGATATAGACGGTCACACCTTTGAGAACCTGGAACTGGGTGGTGCTGCTTCGGTTCAAGTGACCGACA > SRR10918231.324626/1‑151 (MQ=0)
AGCGCGCCGTACACCCACGACGCACAGGGCGATGACGTCTACCAGGACGCAGGCCAGATCAGTCTGGGCATCACGTCCGCTGTGGATATAGACGGTCACACCTTTGAGAACCTGGAACTGGGTGGTGCTGCTTCGGTTCAAGTGACCGACA < SRR10918231.160157/151‑1 (MQ=0)
AGCGCGCCATACACCCACGACGCACAGGGCGATGACGTCTACCAGGACGCAGGCCAGATCAGTCTGGGCATCACGTCCGCTGTGGATATAGACGGTCACACCTTTGAGAACCTGGAACTGGGTGGTGCTGCTTCGGTTCAAGTGACCGACA < SRR10918231.4785262/151‑1 (MQ=0)
GCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACCAGGACGCTGGCCAGATCAGTCTGGGCATCACGTCCGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGGAACTGGGCGGTGCTGCTTCGGTTCAAGTGACCGACAC < SRR10918231.2779375/151‑1 (MQ=0)
CGCGCCGTACACCCACGACGCACAGGGCGATGACGTCTACCAGGACGCAGGCCAGATCAGTCTGGGCATCACGTCCGCTGTGGATATAGACGGTCACACCTTTGAGAACCTGGAACTGGGTGGTGCTGCTTCGGTTCAAGTGACCGACACC < SRR10918231.3624370/151‑1 (MQ=0)
CGCGCCGTACACCCACGACGCACAGGGCGATGACGTCTACCAGGACGCAGGCCAGATCAGTCTGGGCATCACGTCCGCTGTGGATATAGACGGTCACACCTTTGAGAACCTGGAACTGGGTGGTGCTGCTTCGGTTCAAGTGACCGACACC < SRR10918231.3944710/151‑1 (MQ=0)
caaggcgatgacgtctacaacgatgctggccagatcagccttggtatcaattcggcggtagacgccaccggcgcaacgttcgagaacctgcaactgggcggcaacGCTTCGGTCCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGC > SRR10918231.4889104/106‑151 (MQ=0)
aggcgatgacgtctacaacgatgctggccagatcagccttggtatcaattcggcggtagacgccaccggcgcaacgttcgagaacctgcaactgggcggcaacGCTTCGGTCCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGCTG > SRR10918231.250507/104‑151 (MQ=8)
ggcgatgacgtctacaacgatgctggccagatcagccttggtatcaattcggcggtagacgccaccggcgcaacgttcgagaacctgcaactgggcggcaacGCTTCGGTCCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGCTGA < SRR10918231.3285583/49‑1 (MQ=14)
cgatgacgtctacaacgatgctggccagatcagccttggtatcaattcggcggtagacgccaccggcgcaacgttcgagaacctgcaactgggcggcaacGCTTCGGTCCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGCTGACC < SRR10918231.1782277/51‑1 (MQ=13)
atgacgtctacaacgatgctggccagatcagccttggtatcaattcggcggtagacgccaccggcgcaacgttcgagaacctgcaactgggcggcaacGCTTCGGTCCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGCTGACCGC < SRR10918231.4236493/53‑1 (MQ=13)
tgacgtctacaacgatgctggccagatcagccttggtatcaattcggcggtagacgccaccggcgcaacgttcgagaacctgcaactgggcggcaacGCTTCGGTCCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGCTGACCGCG < SRR10918231.3284310/54‑1 (MQ=13)
cgtctacaacgatgctggccagatcagccttggtatcaattcggcggtagacgccaccggcgcaacgttcgagaacctgcaactgggcggcaacGCTTCGGTCCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGCTGACCGCGACC < SRR10918231.372667/57‑1 (MQ=12)
gtctacaacgatgctggccagatcagccttggtatcaattcggcggtagacgccaccggcgcaacgttcgagaacctgcaactgggcggcaacGCTTCGGTCCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGCTGACCGCGACCC > SRR10918231.1090106/94‑151 (MQ=12)
gtctacaacgatgctggccagatcagccttggtatcaattcggcggtagacgccaccggcgcaacgttcgagaacctgcaactgggcggcaacGCTTCGGTCCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGCTGACCGCGACCC > SRR10918231.2675773/94‑151 (MQ=12)
gtctacaacgatgctggccagatcagccttggtatcaattcggcggtagacgccaccggcgcaacgttcgagaacctgcaactgggcggcaacGCTTCGGTCCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGCTGACCGCGACCC > SRR10918231.2272055/94‑151 (MQ=12)
acaacgatgctggccagatcagccttggtatcaattcggcggtagacgccaccggcgcaacgttcgagaacctgcaactgggcggcaacGCTTCGGTCCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGCTGACCGCGACCCCGTC > SRR10918231.377306/90‑151 (MQ=24)
acaacgatgctggccagatcagccttggtatcaattcggcggtagacgccaccggcgcaacgttcgagaacctgcaactgggcggcaacGCTTCGGTCCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGCTGACCGCGACCCCGTC < SRR10918231.1383008/62‑1 (MQ=60)
acgatgctggccagatcagccttggtatcaattcggcggtagacgccaccggcgcaacgttcgagaacctgcaactgggcggcaacGCTTCGGTCCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGCTGACCGCGACCCCGTCGGT > SRR10918231.4340933/87‑151 (MQ=29)
atgctggccagatcagccttggtatcaattcggcggtagacgccaccggcgcaacgttcgagaacctgcaactgggcggcaacGCTTCGGTCCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGCTGACCGCGACCCCGTCGGTCAC < SRR10918231.4425680/68‑1 (MQ=29)
atgctggccagatcagccttggtatcaattcggcggtagacgccaccggcgcaacgttcgagaacctgcaactgggcggcaacGCTTCGGTCCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGCTGACCGCGACCCCGTCGGTCAC < SRR10918231.2379573/68‑1 (MQ=29)
ctggccagatcagccttggtatcaattcggcggtagacgccaccggcgcaacgttcgagaacctgcaactgggcggcaacGCTTCGGTCCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGCTGACCGCGACCCCGTCGGTCACCGA < SRR10918231.4585001/71‑1 (MQ=28)
ctggccagatcagccttggcatcaactcggcggtagacgccactggtgcgaccttcgagaacctgcaactgggcggcaacGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTCGTGGCCAAGCTGACCGCGACCCCGTCGGTCACCGA < SRR10918231.228012/71‑1 (MQ=5)
tggccagatcagccttggtatcaattcggcggtagacgccaccggcgcaacgttcgagaacctgcaactgggcggcaacGCTTCGGTCCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGCTGACCGCGACCCCGTCGGTCACCGAA < SRR10918231.4774224/72‑1 (MQ=28)
TGGCCAGATCAGTCTGGGCATCACGTCCGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGGAACTGGGCGGTGCTGCTTCGGTTCAAGTGACCGACACCCTCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCTTCGGTCACCGAA < SRR10918231.378829/151‑1 (MQ=0)
gccagatcagccttggtatcaattcggcggtagacgccaccggcgcaacgttcgagaacctgcaactgggcggcaacGCTTCGGTCCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGCTGACCGCGACCCCGTCGGTCACCGAAGG > SRR10918231.1614341/78‑151 (MQ=28)
GCCAGATCAGTCTGGGCATCACGTCCGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGGAACTGGGCGGTGCTGCTTCGGTTCAAGTGACCGACACCCTCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCTTCGGTCACCGAAGG > SRR10918231.836206/1‑151 (MQ=2)
GCCAGATCAGTCTGGGCATCACGTCCGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGGAACTGGGCGGTGCTGCTTCGGTTCAAGTGACCGACACCCTCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCTTCGGTCACCGAAGG < SRR10918231.4965752/151‑1 (MQ=2)
ccagatcagccttggtatcaattcggcggtagacgccaccggcgcaacgttcgagaacctgcaactgggcggcaacGCTTCGGTCCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGCTGACCGCGACCCCGTCGGTCACCGAAGG‑C < SRR10918231.149433/75‑1 (MQ=25)
ccagatcagccttggtatcaattcggcggtagacgccaccggcgcaacgttcgagaacctgcaactgggcggcaacGCTTCGGTCCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGCTGACCGCGACCCCGTCGGTCACCGAAGG‑C < SRR10918231.5110095/75‑1 (MQ=25)
ccagatcagccttggtatcaattcggcggtagacgccaccggcgcaacgttcgagaacctgcaactgggcggcaacGCTTCGGTCCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGCTGACAGCGACCCCGTCGGTCACCGAAGG‑C > SRR10918231.2646369/77‑151 (MQ=23)
ccagatcagccttgggatcaattcggcggtagacgccaccggcgcaacgttcgagaacctgcaactgggcggcaacGCTTCGGTCCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGCTGACCGCGACCCCGTCGGTCACCGAAGG‑C < SRR10918231.2266892/75‑1 (MQ=25)
CCAGATCAGTCTGGGCATCACGTCCGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGGAACTGGGCGGTGCTGCTTCGGTTCAAGTGACCGACACCCTCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCTTCGGTCACCGAAGG‑C < SRR10918231.658313/151‑1 (MQ=2)
CCAGATCAGTCTGGGCATCACGTCCGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGGAACTGGGCGGTGCTGCTTCGGTTCAAGTGACCGACACCCTCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCTTCGGTCACCGAAGG‑C < SRR10918231.3385250/151‑1 (MQ=2)
tccgatcttgggcatcaactcggcggtagacgccactggtgcgaccttcgagaacctgcaactgggcggcaacGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTCGTGGCCAAGCTGACCGCGACCCCGTCGGTCACCGAAGGcggc < SRR10918231.2808131/78‑5 (MQ=0)
gatcagccttggtatcaattcggcggtagacgccaccggcgcaacgttcgagaacctgcaactgggcggcaacGCTTCGGTCCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGCTGACCGCGACCCCGTCGGTCACCGAAGGcggc > SRR10918231.3908940/74‑147 (MQ=60)
GATCAGTCTGGGCATCACGTCCGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGGAACTGGGCGGTGCTGCTTCGGTTCAAGTGACCGACACCCTCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGT < SRR10918231.4706241/151‑1 (MQ=2)
ATCAGTCTGGGCATCACGTCCGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGGAACTGGGCGGTGCTGCTTCGGTTCAAGTGACCGACACCCTCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTG < SRR10918231.1798283/151‑1 (MQ=2)
tcagccttggtatcaattcggcggtagacgccaccggcgcaacgttcgagaacctgcaactgggcggcaacGCTTCGGTCCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGCTGACCGCGACCCCGTCGGTCACCGAAGGcggcga > SRR10918231.2512316/72‑145 (MQ=8)
agccttggtatcaattcggcggtagacgccaccggcgcaacgttcgagaacctgcaactgggcggcaacGCTTCGGTCCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGCTGACCGCGACCCCGTCGGTCACCGAAGGcggcgaga > SRR10918231.2716326/70‑143 (MQ=3)
AGTCTGGGCATCACGTCCGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGGAACTGGGCGGTGCTGCTTCGGTTCAAGTGACCGACACCCTCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCTTCGGTCACCGAAGGcggtgaga < SRR10918231.3900084/151‑9 (MQ=2)
gccttggtatcaattcggcggtagacgccaccggcgcaacgttcgagaacctgcaactgggcggcaacGCTTCGGTCCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGCTGACCGCGACCCCGTCGGTCACCGAAGGcggcgagat > SRR10918231.3379115/69‑142 (MQ=0)
TCTGGGCATCACGTCCGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGGAACTGGGCGGTGCTGCTTCGGTTCAAGTGACCGACACCCTCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCTTCGGTCACCGAAGGcggtgagatc < SRR10918231.890451/151‑11 (MQ=2)
TGGGCATCACGTCCGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGGAACTGGGCGGTGCTGCTTCGGTTCAAGTGACCGACACCCTCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCTTCGGTCACCGAAGGcggtgagatcac > SRR10918231.142215/1‑139 (MQ=2)
TGGGCATCACGTCCGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGGAACTGGGCGGTGCTGCTTCGGTTCAAGTGACCGACACCCTCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCTTCGGTCACCGAAGGcggtgagatcac < SRR10918231.3190243/151‑13 (MQ=2)
ggtatcaattcggcggtagacgccaccggcgcaacgttcgagaacctgcaactgggcggcaacGCTTCGGTCCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGCTGACCGCGACCCCGTCGGTGACCGAAGGcggcgagatccctt > SRR10918231.752597/64‑137 (MQ=0)
gcatcaactcggcggtagacgccactggtgcgaccttcgagaacctgcaactgggcggcaacGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTCGTGGCCAAGCTGACCGCGACCCCGTCagatcggaagagcacacgtctgaactc > SRR10918231.2290707/63‑124 (MQ=6)
CATCACGTCCGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGGAACTGGGCGGTGCTGCTTCGGTTCACGTGACCGACACCCTCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCTTCGGTCACCGAAGGcggtgagatcacctac > SRR10918231.940001/1‑135 (MQ=2)
CATCACGTCCGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGGAACTGGGCGGTGCTGCTTCGGTTCAAGTGACCGACACCCTCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCTTCGGTCACCGAAGGcggtgagatcacctac < SRR10918231.2645021/151‑17 (MQ=2)
CATCACGTCCGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGGAACTGGGCGGTGCTGCTTCGGTTCAAGTGACCGACACCCTCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCTTCGGTCACCGAAGGcggtgagatcacctac > SRR10918231.2042634/1‑135 (MQ=2)
CACGTCCGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGGAACTGGGCGGTGCTGCTTCGGTTCAAGTGACCGACACCCTCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCTTCGGTCACCGAAGGcggtgagatcacctacacc < SRR10918231.2412449/151‑20 (MQ=2)
GTCCGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGGAACTGGGCGGTGCTGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCCAAGCTGACCGCGACCCCTGCGGTCACCGAAGGcggtgagatcacctacaccatc < SRR10918231.604931/151‑23 (MQ=2)
CCGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGGAACTGGGCGGTGCTGCTTCGGTTCAAGTGACCGACACCCTCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCTTCGGTCACCGAAGGcggtgagatcacctacaccatcac < SRR10918231.734382/151‑25 (MQ=1)
CCGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGGAACTGGGCGGTGCTGCTTCGGTTCAAGTGACCGACACCCTCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCTTCGGTCACCGAAGGcggtgagatcacctacaccatcac < SRR10918231.742684/151‑25 (MQ=1)
CCGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGGAACTGGGCGGTGCTGCTTCGGTTCAAGTGACCGACACCCTCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCTTCGGTCACCGAAGGcggtgagatcacctacaccatcac > SRR10918231.4506935/1‑127 (MQ=1)
CCGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGGAACTGGGCGGTGCTGCTTCGGTTCAAGTGACCGACACCCTCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCTTCGGTCACCGAAGGcggtgagatcacctacaccatcac < SRR10918231.4825527/151‑25 (MQ=1)
CGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGGAACTGGGCGGTGCTGCTTCGGTTCAAGTGACCGACACCCTCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCTTCGGTCACCGAAGGcggtgagatcacctacaccatcacg < SRR10918231.3599663/151‑26 (MQ=1)
CTGTGGATGTAGACGGTCACACCTTCGAGAACCTGGAACTGGGCGGTGCTGCTTCGGTTCAAGTGACCGACACCCTCGACGAAGTGGTGGCCAAGCTGACCGCGACCCCTTCGGTCACCGAAGGcggtgagatcacctacaccatcacgct < SRR10918231.5123253/151‑28 (MQ=0)
gggcggcaacGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGagatcggaagagcacacgtctgaactccagtcactggtgaagatctcgtatgccgtcttctgcttgaaaaaaaaaacctgacgctcaacaaccacagtgca > SRR10918231.2964657/11‑50 (MQ=27)
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GGCCGGTGAAACCAGCGCGCCGTACACCCACGACGCACAGGGCGATGACGTCTACCAGGACGCAGGCCAGATCAGTCTGGGCATCACGTCCGCTGTGGATATAGACGGTCACACCTTTGAGAACCTGGAACTGGGTGGTGCTGCTTCGGTTCAAGTGACCGACACCACCGACGAAGTAGTGGCCAAGCTGACCGCGACCCCGTCGGTCACCGAAGG‑GGTGGCAGTCAGCTTGGCCACGACTTCGTCGAGGGTGTCGGTCACTTGAACCGAAGCAGCACCACC > CP009974/1897750‑1898031
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
