Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F224 I0 R1 1457 284.0 9290224 95.7% 8890744 150.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP009273 312,532 G→A 93.8% pseudogene (349/684 nt) ykgA ← pseudogene, AraC family;putative regulator; Not classified; putative ARAC‑type regulatory protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP009273312,5320GA93.8% 743.4 / 29.7 224pseudogene (349/684 nt)ykgApseudogene, AraC family;putative regulator; Not classified; putative ARAC‑type regulatory protein
Reads supporting (aligned to +/- strand):  ref base G (8/6);  new base A (126/84);  total (134/90)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.95e-01

Only 100 of 225 total aligned reads displayed.

CCGGTGATTTATTCGACACTTCAATGTCATATTTAAATGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACGGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCGGACAAGAATGGCGGCACGACAAAGCCTTC  >  CP009273/312385‑312678
                                                                                                                                                   |                                                                                                                                                  
ccGGTGATTTATTCGACACTTCAATGTCATATTTAAATGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACGGt                                                                                                                                                  >  2:334607/1‑150 (MQ=255)
ccGGTGATTTATTCGACACTTCAATGTCATATTTAAATGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGt                                                                                                                                                  <  2:3488934/150‑1 (MQ=255)
  ggTGATTTATTCGACACTTCAATGTCATATTTAAATGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTgg                                                                                                                                                >  1:847785/1‑150 (MQ=255)
    tGATTTATTCGACACTTCAATGTCATATTTAAATGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACGGTGGCg                                                                                                                                              <  2:1914631/150‑1 (MQ=255)
     gATTTATTCGACACTTCAATGTCATATTTAAATGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCgg                                                                                                                                             >  1:2252594/1‑150 (MQ=255)
       tttATTCGACACTTCAATGTCATATTTAAATGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTa                                                                                                                                           >  1:4564329/1‑150 (MQ=255)
        ttATTCGACACTTCAATGTCATATTTAAATGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTAt                                                                                                                                          <  2:4396327/150‑1 (MQ=255)
         tATTCGACACTTCAATGTCATATTTAAATGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTAtt                                                                                                                                         <  1:864720/150‑1 (MQ=255)
          aTTCGACACTTCAATGTCATATTTAAATGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTc                                                                                                                                        <  2:3547235/150‑1 (MQ=255)
            tCGACACTTCAATGTCATATTTAAATGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCAc                                                                                                                                      <  1:37797/150‑1 (MQ=255)
               acacTTCAATGTCATATTTAAATGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACggg                                                                                                                                   >  2:842033/1‑150 (MQ=255)
                cacTTCAATGTCATATTTAAATGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACgggg                                                                                                                                  <  2:4100764/150‑1 (MQ=255)
                cacTTCAATGTCATATTTAAATGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACgggg                                                                                                                                  >  1:2828449/1‑150 (MQ=255)
                cacTTCAATGTCATATTTAAATGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACgggg                                                                                                                                  >  2:2747528/1‑150 (MQ=255)
                cacTTCAATGTCATATTTAAATGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACgggg                                                                                                                                  >  1:1498870/1‑150 (MQ=255)
                 acTTCAATGTCATATTTAAATGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGga                                                                                                                                 <  2:1712372/150‑1 (MQ=255)
                      aaTGTCATATTTAAATGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGagca                                                                                                                            <  2:2937340/150‑1 (MQ=255)
                      aaTGTCATATTTAAATGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGagca                                                                                                                            >  1:2814563/1‑150 (MQ=255)
                         gTCATATTTAAATGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGcc                                                                                                                         >  2:2486212/1‑150 (MQ=255)
                          tCATATTTAAATGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCATGGGGAGAGCAGCCg                                                                                                                        <  2:2393294/150‑1 (MQ=255)
                           cATATTTAAATGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGa                                                                                                                       <  1:4507119/150‑1 (MQ=255)
                           cATATTTAAATGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGa                                                                                                                       <  2:2349789/150‑1 (MQ=255)
                              atTTAAATGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATa                                                                                                                    >  1:1589097/1‑150 (MQ=255)
                              atTTAAATGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATa                                                                                                                    <  1:1473395/150‑1 (MQ=255)
                                   aaTGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACttt                                                                                                               <  2:2317575/150‑1 (MQ=255)
                                    aTGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACGGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACtttt                                                                                                              <  2:3809675/150‑1 (MQ=255)
                                    aTGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACtttt                                                                                                              <  2:2781813/150‑1 (MQ=255)
                                     tGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACttttt                                                                                                             >  2:199275/1‑150 (MQ=255)
                                     tGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACttttt                                                                                                             <  1:4344868/150‑1 (MQ=255)
                                     tGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACttttt                                                                                                             <  1:1065901/150‑1 (MQ=255)
                                       aGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTaa                                                                                                           >  1:1284266/1‑150 (MQ=255)
                                        gTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTaaa                                                                                                          <  1:4575997/150‑1 (MQ=255)
                                         ttGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAAt                                                                                                         <  2:1818421/150‑1 (MQ=255)
                                          tGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAAtt                                                                                                        >  2:2088805/1‑150 (MQ=255)
                                          tGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAAtt                                                                                                        >  1:1340360/1‑150 (MQ=255)
                                           gCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTc                                                                                                       <  1:831095/150‑1 (MQ=255)
                                            ccAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTcg                                                                                                      >  1:3611711/1‑150 (MQ=255)
                                                aaaTAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACGGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGc                                                                                                  >  1:2130715/1‑150 (MQ=255)
                                                 aaTAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCt                                                                                                 >  1:3058437/1‑150 (MQ=255)
                                                 aaTAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCt                                                                                                 >  1:3058144/1‑150 (MQ=255)
                                                 aaTAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCt                                                                                                 <  1:4394839/150‑1 (MQ=255)
                                                    aGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGaa                                                                                              >  2:1476708/1‑150 (MQ=255)
                                                     ggTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAAt                                                                                             <  2:1286773/150‑1 (MQ=255)
                                                         tctcAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGACGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGAct                                                                                         >  2:1123634/1‑150 (MQ=255)
                                                          ctcAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGActg                                                                                        >  2:511565/1‑150 (MQ=255)
                                                             aGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGActgctg                                                                                     >  2:1390387/1‑150 (MQ=255)
                                                                aaaGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGa                                                                                  <  2:2433663/150‑1 (MQ=255)
                                                                  aGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAAt                                                                                <  2:2054281/150‑1 (MQ=255)
                                                                  aGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAAt                                                                                <  1:419899/150‑1 (MQ=255)
                                                                        ttAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAAt                                                                          >  1:1288237/1‑150 (MQ=255)
                                                                         tAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATg                                                                         >  2:920816/1‑150 (MQ=255)
                                                                         tAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATg                                                                         <  2:1937693/150‑1 (MQ=255)
                                                                          aaTCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGc                                                                        <  1:2355702/150‑1 (MQ=255)
                                                                             cTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCaaa                                                                     >  2:1892214/1‑150 (MQ=255)
                                                                                  cTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAagagag                                                                >  1:2604496/1‑150 (MQ=255)
                                                                                  cTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAagagag                                                                <  1:2666891/150‑1 (MQ=255)
                                                                                     cGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGc                                                             <  2:4311633/150‑1 (MQ=255)
                                                                                     cGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGc                                                             <  2:780883/150‑1 (MQ=255)
                                                                                      gTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCa                                                            >  1:1123210/1‑150 (MQ=255)
                                                                                      gTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCa                                                            >  1:2493907/1‑150 (MQ=255)
                                                                                       tCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCaa                                                           >  2:2160125/1‑150 (MQ=255)
                                                                                       tCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCaa                                                           >  2:3782810/1‑150 (MQ=255)
                                                                                             gCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCaa                                                     >  2:36275/1‑150 (MQ=255)
                                                                                              cTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAg                                                    >  1:672253/1‑150 (MQ=255)
                                                                                               tGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACGGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAGc                                                   >  1:3277336/1‑150 (MQ=255)
                                                                                                 ttGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAGCAt                                                 >  2:478621/1‑150 (MQ=255)
                                                                                                  tGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAGCATa                                                <  1:582147/150‑1 (MQ=255)
                                                                                                  tGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAGCATa                                                <  1:488079/150‑1 (MQ=255)
                                                                                                      gTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAGCATAGAtt                                            <  1:2344119/150‑1 (MQ=255)
                                                                                                      gTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAGCATAGAtt                                            <  1:3014488/150‑1 (MQ=255)
                                                                                                       tATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAGCATAGAttt                                           >  1:4267002/1‑150 (MQ=255)
                                                                                                       tATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAGCATAGAttt                                           <  2:167499/150‑1 (MQ=255)
                                                                                                        aTTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTc                                          >  2:152471/1‑150 (MQ=255)
                                                                                                              aaaGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTg                                    >  2:2163619/1‑150 (MQ=255)
                                                                                                                  aagGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGcc                                >  2:2550763/1‑150 (MQ=255)
                                                                                                                  aagGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGcc                                >  2:2119926/1‑150 (MQ=255)
                                                                                                                  aagGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGcc                                >  1:750278/1‑150 (MQ=255)
                                                                                                                     ggAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCGGa                             >  2:2567013/1‑150 (MQ=255)
                                                                                                                     ggAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCGGa                             >  2:232029/1‑150 (MQ=255)
                                                                                                                      gAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCGGAc                            <  1:4071837/150‑1 (MQ=255)
                                                                                                                      gAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCGGAc                            >  1:2341413/1‑150 (MQ=255)
                                                                                                                         gATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCGGACAAg                         >  2:325146/1‑150 (MQ=255)
                                                                                                                         gATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCGGACAAg                         >  2:324251/1‑150 (MQ=255)
                                                                                                                           tatTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCGGACAAGaa                       <  1:3381506/150‑1 (MQ=255)
                                                                                                                            atTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCGGACAAGAAt                      >  1:4132839/1‑150 (MQ=255)
                                                                                                                             tttGCGAGATCCCAATAATCACGGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCGGACAAGAATg                     <  1:216789/150‑1 (MQ=255)
                                                                                                                             tttGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCGGACAAGAATg                     <  1:1715559/150‑1 (MQ=255)
                                                                                                                                 cGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCGGACAAGAATggcgg                 <  2:317384/150‑1 (MQ=255)
                                                                                                                                 cGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCGGACAAGAATggcgg                 >  2:4547980/1‑150 (MQ=255)
                                                                                                                                  gagaTCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCGGACAAGAATggcggc                >  2:3534733/1‑150 (MQ=255)
                                                                                                                                   agaTCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCGGACAAGAATGGCGGCa               <  2:712074/150‑1 (MQ=255)
                                                                                                                                        ccAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCGGACAAGAATGGCGGCACGACa          >  2:864504/1‑150 (MQ=255)
                                                                                                                                         cAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTTGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCGGACAAGAATGGCGGCACGACaa         >  1:1660296/1‑150 (MQ=255)
                                                                                                                                          aataatCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCGGACAAGAATGGCGGCACGACaaa        <  1:1777131/150‑1 (MQ=255)
                                                                                                                                          aataatCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCGGACAAGAATGGCGGCACGACaaa        >  2:70914/1‑150 (MQ=255)
                                                                                                                                           ataatCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCGGACAAGAATGGCGGCACGACAAAg       >  1:2075482/1‑150 (MQ=255)
                                                                                                                                           ataatCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCGGACAAGAATGGCGGCACGACAAAg       >  1:1915953/1‑150 (MQ=255)
                                                                                                                                             aatCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCGGACAAGAATGGCGGCACGACAAAGcc     >  2:176489/1‑150 (MQ=255)
                                                                                                                                              atCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCGGACAAGAATGGCGGCACGACAAAGCCt    >  2:3098268/1‑150 (MQ=255)
                                                                                                                                                cacaGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCGGACAAGAATGGCGGCACGACAAAGCCTTc  >  2:4187338/1‑150 (MQ=255)
                                                                                                                                                   |                                                                                                                                                  
CCGGTGATTTATTCGACACTTCAATGTCATATTTAAATGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACGGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCGGACAAGAATGGCGGCACGACAAAGCCTTC  >  CP009273/312385‑312678

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
GGTGATTTATTCGACACTTCAATGTCATATTTAAATGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACGGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCGGACAAGAATGGCGGCACGACAAAGCCTTCGTT  >  CP009273/312387‑312681
                                                                                                                                                 |                                                                                                                                                     
GGTGATTTATTCGACACTTCAATGTCATATTTAAATGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGG                                                                                                                                                   >  SRR19973072.849608/1‑150 (MQ=60)
 GTGATTTATTCGACACTTCAATGTCATATTTAAATGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGC                                                                                                                                                  >  SRR19973072.544621/1‑150 (MQ=60)
   GATTTATTCGACACTTCAATGTCATATTTAAATGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGG                                                                                                                                                >  SRR19973072.2257446/1‑150 (MQ=60)
   GATTTATTCGACACTTCAATGTCATATTTAAATGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGG                                                                                                                                                >  SRR19973072.2257792/1‑150 (MQ=60)
     TTTATTCGACACTTCAATGTCATATTTAAATGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTA                                                                                                                                              >  SRR19973072.4573935/1‑150 (MQ=60)
      TTATTCGACACTTCAATGTCATATTTAAATGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTAT                                                                                                                                             <  SRR19973072.3365568/150‑1 (MQ=60)
       TATTCGACACTTCAATGTCATATTTAAATGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATT                                                                                                                                            <  SRR19973072.866580/150‑1 (MQ=60)
       TATTCGACACTTCAATGTCATATTTAAATGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATT                                                                                                                                            <  SRR19973072.866570/150‑1 (MQ=60)
        ATTCGACACTTCAATGTCATATTTAAATGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTC                                                                                                                                           >  SRR19973072.2837130/1‑150 (MQ=60)
          TCGACACTTCAATGTCATATTTAAATGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCAC                                                                                                                                         <  SRR19973072.37901/150‑1 (MQ=60)
              CACTTCAATGTCATATTTAAATGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGG                                                                                                                                     >  SRR19973072.1502042/1‑150 (MQ=60)
              CACTTCAATGTCATATTTAAATGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGG                                                                                                                                     >  SRR19973072.1502065/1‑150 (MQ=60)
              CACTTCAATGTCATATTTAAATGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGG                                                                                                                                     >  SRR19973072.2834506/1‑150 (MQ=60)
                    AATGTCATATTTAAATGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCA                                                                                                                               >  SRR19973072.2820712/1‑150 (MQ=60)
                    AATGTCATATTTAAATGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCA                                                                                                                               >  SRR19973072.2820593/1‑150 (MQ=60)
                    AATGTCATATTTAAATGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCA                                                                                                                               >  SRR19973072.2820492/1‑150 (MQ=60)
                        TCATATTTAAATGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCG                                                                                                                           <  SRR19973072.3566687/150‑1 (MQ=60)
                         CATATTTAAATGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGA                                                                                                                          <  SRR19973072.4516636/150‑1 (MQ=60)
                            ATTTAAATGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATA                                                                                                                       <  SRR19973072.1476551/150‑1 (MQ=60)
                            ATTTAAATGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATA                                                                                                                       >  SRR19973072.1592509/1‑150 (MQ=60)
                            ATTTAAATGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATA                                                                                                                       >  SRR19973072.1592713/1‑150 (MQ=60)
                            ATTTAAATGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATA                                                                                                                       >  SRR19973072.1592801/1‑150 (MQ=60)
                               TAAATGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACT                                                                                                                    <  SRR19973072.4153554/150‑1 (MQ=60)
                                   TGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTT                                                                                                                <  SRR19973072.4353968/150‑1 (MQ=60)
                                   TGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTT                                                                                                                <  SRR19973072.1068186/150‑1 (MQ=60)
                                   TGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTT                                                                                                                <  SRR19973072.1068182/150‑1 (MQ=60)
                                    GAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTA                                                                                                               >  SRR19973072.1237209/1‑150 (MQ=60)
                                     AGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAA                                                                                                              >  SRR19973072.1287040/1‑150 (MQ=60)
                                      GTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAA                                                                                                             <  SRR19973072.4585647/150‑1 (MQ=60)
                                      GTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAA                                                                                                             <  SRR19973072.4585624/150‑1 (MQ=60)
                                        TGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATT                                                                                                           >  SRR19973072.1343293/1‑150 (MQ=60)
                                         GCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTC                                                                                                          <  SRR19973072.832884/150‑1 (MQ=60)
                                          CCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCG                                                                                                         >  SRR19973072.3619314/1‑150 (MQ=60)
                                          CCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCG                                                                                                         >  SRR19973072.1341791/1‑150 (MQ=60)
                                              AAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACGGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGC                                                                                                     >  SRR19973072.1750667/1‑150 (MQ=60)
                                              AAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACGGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGC                                                                                                     >  SRR19973072.2135358/1‑150 (MQ=60)
                                              AAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACGGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGC                                                                                                     >  SRR19973072.2135351/1‑150 (MQ=60)
                                               AATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCT                                                                                                    <  SRR19973072.4404030/150‑1 (MQ=60)
                                               AATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCT                                                                                                    <  SRR19973072.4404078/150‑1 (MQ=60)
                                               AATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCT                                                                                                    >  SRR19973072.1538622/1‑150 (MQ=60)
                                               AATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCT                                                                                                    >  SRR19973072.3064899/1‑150 (MQ=60)
                                               AATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCT                                                                                                    >  SRR19973072.3064611/1‑150 (MQ=60)
                                               AATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCT                                                                                                    >  SRR19973072.3064606/1‑150 (MQ=60)
                                                 TAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGA                                                                                                  >  SRR19973072.1404172/1‑150 (MQ=60)
                                                   GGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAAT                                                                                                >  SRR19973072.2665175/1‑150 (MQ=60)
                                                           AGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTG                                                                                        >  SRR19973072.4546777/1‑150 (MQ=60)
                                                            GGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGT                                                                                       <  SRR19973072.3879466/150‑1 (MQ=60)
                                                               AAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAA                                                                                    >  SRR19973072.3716641/1‑150 (MQ=60)
                                                                AGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAAT                                                                                   <  SRR19973072.420845/150‑1 (MQ=60)
                                                                AGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAAT                                                                                   <  SRR19973072.290424/150‑1 (MQ=60)
                                                                      TTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAAT                                                                             >  SRR19973072.1291024/1‑150 (MQ=60)
                                                                        AATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGC                                                                           <  SRR19973072.2360759/150‑1 (MQ=60)
                                                                        AATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGC                                                                           <  SRR19973072.2360769/150‑1 (MQ=60)
                                                                           CTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAA                                                                        <  SRR19973072.2003655/150‑1 (MQ=60)
                                                                           CTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAA                                                                        >  SRR19973072.4221316/1‑150 (MQ=60)
                                                                                CTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAG                                                                   >  SRR19973072.2610111/1‑150 (MQ=60)
                                                                                CTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAG                                                                   <  SRR19973072.2672594/150‑1 (MQ=60)
                                                                                 TCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGT                                                                  >  SRR19973072.1715404/1‑150 (MQ=60)
                                                                                  CCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTG                                                                 <  SRR19973072.4576642/150‑1 (MQ=60)
                                                                                    GTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCA                                                               >  SRR19973072.1125573/1‑150 (MQ=60)
                                                                                    GTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCA                                                               >  SRR19973072.2499326/1‑150 (MQ=60)
                                                                                    GTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCA                                                               >  SRR19973072.2499364/1‑150 (MQ=60)
                                                                                      CTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAAT                                                             <  SRR19973072.772537/150‑1 (MQ=60)
                                                                                      CTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAAT                                                             >  SRR19973072.1896902/1‑150 (MQ=60)
                                                                                          TGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCA                                                         >  SRR19973072.1289318/1‑150 (MQ=60)
                                                                                            CTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAG                                                       >  SRR19973072.673753/1‑150 (MQ=60)
                                                                                             TGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACGGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAGC                                                      >  SRR19973072.3284293/1‑150 (MQ=60)
                                                                                                TGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAGCATA                                                   <  SRR19973072.583504/150‑1 (MQ=60)
                                                                                                TGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAGCATA                                                   <  SRR19973072.489234/150‑1 (MQ=60)
                                                                                                TGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAGCATA                                                   <  SRR19973072.583585/150‑1 (MQ=60)
                                                                                                    GTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAGCATAGATT                                               <  SRR19973072.3020892/150‑1 (MQ=60)
                                                                                                    GTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAGCATAGATT                                               <  SRR19973072.2349150/150‑1 (MQ=60)
                                                                                                     TATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAGCATAGATTT                                              >  SRR19973072.4275874/1‑150 (MQ=60)
                                                                                                     TATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAGCATAGATTT                                              >  SRR19973072.2264636/1‑150 (MQ=60)
                                                                                                     TATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAGCATAGATTT                                              >  SRR19973072.4275914/1‑150 (MQ=60)
                                                                                                            AAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTG                                       <  SRR19973072.4588954/150‑1 (MQ=60)
                                                                                                              AGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAG                                     <  SRR19973072.3129130/150‑1 (MQ=60)
                                                                                                                AAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCC                                   >  SRR19973072.751875/1‑150 (MQ=60)
                                                                                                                    GAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAGGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCGGAC                               >  SRR19973072.2346585/1‑150 (MQ=60)
                                                                                                                    GAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCGGAC                               >  SRR19973072.2346436/1‑150 (MQ=60)
                                                                                                                    GAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCGGAC                               <  SRR19973072.4080380/150‑1 (MQ=60)
                                                                                                                      AGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCGGACAA                             >  SRR19973072.1316463/1‑150 (MQ=60)
                                                                                                                         TATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCGGACAAGAA                          <  SRR19973072.3388656/150‑1 (MQ=60)
                                                                                                                          ATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCGGACAAGAAT                         >  SRR19973072.4141511/1‑150 (MQ=60)
                                                                                                                          ATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCGGACAAGAAT                         >  SRR19973072.4141318/1‑150 (MQ=60)
                                                                                                                           TTTGCGAGATCCCAATAATCACGGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCGGACAAGAATG                        <  SRR19973072.217333/150‑1 (MQ=60)
                                                                                                                           TTTGCGAGATCCCAATAATCACGGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCGGACAAGAATG                        <  SRR19973072.217261/150‑1 (MQ=60)
                                                                                                                           TTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCGGACAAGAATG                        <  SRR19973072.1719316/150‑1 (MQ=60)
                                                                                                                           TTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCGGACAAGAATG                        <  SRR19973072.843848/150‑1 (MQ=60)
                                                                                                                               CGAGATCCCAATAATCACGGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCGGACAAGAATGGCGG                    >  SRR19973072.252965/1‑150 (MQ=60)
                                                                                                                                 AGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCGGACAAGAATGGCGGCA                  >  SRR19973072.685671/1‑150 (MQ=60)
                                                                                                                                       CAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTTGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCGGACAAGAATGGCGGCACGACAA            >  SRR19973072.1663938/1‑150 (MQ=60)
                                                                                                                                        AATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCGGACAAGAATGGCGGCACGACAAA           <  SRR19973072.2227689/150‑1 (MQ=60)
                                                                                                                                        AATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCGGACAAGAATGGCGGCACGACAAA           >  SRR19973072.3059670/1‑150 (MQ=60)
                                                                                                                                        AATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCGGACAAGAATGGCGGCACGACAAA           >  SRR19973072.4361625/1‑150 (MQ=60)
                                                                                                                                        AATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCGGACAAGAATGGCGGCACGACAAA           >  SRR19973072.4467890/1‑150 (MQ=60)
                                                                                                                                        AATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCGGACAAGAATGGCGGCACGACAAA           <  SRR19973072.1781020/150‑1 (MQ=60)
                                                                                                                                         ATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCGGACAAGAATGGCGGCACGACAAAG          >  SRR19973072.2080001/1‑150 (MQ=60)
                                                                                                                                         ATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCGGACAAGAATGGCGGCACGACAAAG          >  SRR19973072.1920030/1‑150 (MQ=60)
                                                                                                                                          TAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCGGACAAGAATGGCGGCACGACAAAGC         >  SRR19973072.4086056/1‑150 (MQ=60)
                                                                                                                                          TAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCGGACAAGAATGGCGGCACGACAAAGC         >  SRR19973072.2475429/1‑150 (MQ=60)
                                                                                                                                           AATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCGGACAAGAATGGCGGCACGACAAAGCC        <  SRR19973072.3327788/150‑1 (MQ=60)
                                                                                                                                             TCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCGGACAAGAATGGCGGCACGACAAAGCCTT      <  SRR19973072.19354/150‑1 (MQ=60)
                                                                                                                                             TCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCGGACAAGAATGGCGGCACGACAAAGCCTT      <  SRR19973072.78771/150‑1 (MQ=60)
                                                                                                                                                 AGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCGGACAAGAATGGCGGCACGACAAAGCCTTCGTT  <  SRR19973072.512785/150‑1 (MQ=60)
                                                                                                                                                 AGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCGGACAAGAATGGCGGCACGACAAAGCCTTCGTT  >  SRR19973072.2927258/1‑150 (MQ=60)
                                                                                                                                                 AGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCGGACAAGAATGGCGGCACGACAAAGCCTTCGTT  >  SRR19973072.2927292/1‑150 (MQ=60)
                                                                                                                                                 AGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCGGACAAGAATGGCGGCACGACAAAGCCTTCGTT  >  SRR19973072.853108/1‑150 (MQ=60)
                                                                                                                                                 AGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCGGACAAGAATGGCGGCACGACAAAGCCTTCGTT  >  SRR19973072.2927421/1‑150 (MQ=60)
                                                                                                                                                 |                                                                                                                                                     
GGTGATTTATTCGACACTTCAATGTCATATTTAAATGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACGGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCGGACAAGAATGGCGGCACGACAAAGCCTTCGTT  >  CP009273/312387‑312681

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑