Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F202 I0 R1
|
1397 |
275.7 |
9089454 |
95.2% |
8653160 |
150.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
CP009273 |
1,444,739 |
G→A |
12.1% |
P290S (CCC→TCC) |
tynA ← |
tyramine oxidase, copper‑requiring |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP009273 | 1,444,739 | 0 | G | A | 12.1%
| 746.1
/ 75.6
| 247 | P290S (CCC→TCC) | tynA | tyramine oxidase, copper‑requiring |
| Reads supporting (aligned to +/- strand): ref base G (102/115); new base A (17/13); total (119/128) |
| Fisher's exact test for biased strand distribution p-value = 3.37e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.61e-01 |
Only 100 of 253 total aligned reads displayed.
AATGATTTGCATAGGCTTAACTGCCGGAGCAACGCGGTCACGGCCATCAAATGGGCGTGCGGTCATTGGCACCGGAACTACCGGACCTTCTTCAATCTTAACGA‑TTTTTTTCTGTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTACGGTCAGCGGCGTGGTAATCACTTTTTTCGCATCAGTAATACCGCGTTTCT > CP009273/1444590‑1444888
|
tGATTTGCATAGGCTTAACTGCCGGAGCAACGCGGTCACGGCCATCAAATGGGCGTGCGGTCATTGGCACCGGAACTACCGGACCTTCTTCAATCTTAACGA‑TTTTTTTCTGTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGGAt > 1:348004/1‑150 (MQ=255)
gATTTGCATAGGCTTAACTGCCGGAGCAACGCGGTCACGGCCATCAAATGGGCGTGCGGTCATTGGCACCGGAACTACCGGACCTTCTTCAATCTTAACGA‑TTTTTTTCTGTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGAAtg < 1:1359658/150‑1 (MQ=255)
aTTTGCATAGGCTTAACTGCCGGAGCAACGCGGTCACGGCCATCAAATGGGCGTGCGGTCATTGGCACCGGAACTACCGGACCTTCTTCAATCTTAACGA‑TTTTTTTCTGTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGGAtgt < 2:1484628/150‑1 (MQ=255)
aTTTGCATAGGCTTAACTGCCGGAGCAACGCGGTCACGGCCATCAAATGGGCGTGCGGTCATTGGCACCGGAACTACCGGACCTTCTTCAATCTTAACGA‑TTTTTTTCTGTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGGAtgt < 2:429806/150‑1 (MQ=255)
aTAGGCTTAACTGCCGGAGCAACGCGGTCACGGCCATCAAATGGGCGTGCGGTCATTGGCACCGGAACTACCGGACCTTCTTCAATCTTAACGA‑TTTTTTTCTGTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCag > 2:2890129/1‑150 (MQ=255)
tAGGCTTAACTGCCGGAGCAACGCGGTCACGGCCATCAAATGGGCGTGCGGTCATTGGCACCGGAACTACCGGACCTTCTTCAATCTTAACGA‑TTTTTTTCTGTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCagt < 1:3208644/150‑1 (MQ=255)
aGGCTTAACTGCCGGAGCAACGCGGTCACGGCCATCAAATGGGCGTGCGGTCATTGGCACCGGAACTACCGGACCTTCTTCAATCTTAACGA‑TTTTTTTCTGTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCagta > 1:4403020/1‑150 (MQ=255)
aGGCTTAACTGCCGGAGCAACGCGGTCACGGCCATCAAATGGGCGTGCGGTCATTGGCACCGGAACTACCGGACCTTCTTCAATCTTAACGA‑TTTTTTTCTGTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCagta > 1:2850174/1‑150 (MQ=255)
aGGCTTAACTGCCGGAGCAACGCGGTCACGGCCATCAAATGGGCGTGCGGTCATTGGCACCGGAACTACCGGACCTTCTTCAATCTTAACGA‑TTTTTTTCTGTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCagta < 2:3607217/150‑1 (MQ=255)
gCTTAACTGCCGGAGCAACGCGGTCACGGCCATCAAATGGGCGTGCGGTCATGGGCACCGGAACTACCGGACCTTCTTCAATCTTAACGA‑TTTTTTTCTGTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGAATGTGCCCagtagt < 1:653773/150‑1 (MQ=255)
cTTAACTGCCGGAGCAACGCGGTCACGGCCATCAAATGGGCGTGCGGTCATTGGCACCGGAACTACCGGACCTTCTTCAATCTTAACGA‑TTTTTTTCTGTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGtt < 1:2244589/150‑1 (MQ=255)
tGCCGGAGCAACGCGGTCACGGCCATCAAATGGGCGTGCGGTCATTGGCACCGGAACTACCGGACCTTCTTCAATCTTAACGA‑TTTTTTTCTGTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATc < 2:174001/150‑1 (MQ=255)
gCCGGAGCAACGCGGTCACGGCCATCAAATGGGCGTGCGGTCATTGGCACCGGAACTACCGGACCTTCTTCAATCTTAACGA‑TTTTTTTCTGTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCa < 2:1158920/150‑1 (MQ=255)
ccGGAGCAACGCGGTCACGGCCATCAAATGGGCGTGCGGTCATTGGCACCGGAACTACCGGACCTTCTTCAATCTTAACGA‑TTTTTTTCTGTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCAc > 2:2798068/1‑150 (MQ=255)
catcgcgGTCACGGCCATCTCATGGGCTTGTGTTCATTGTCACCGTAATTACCGTACCTTATTCAAACTTAACGA‑TTTTTTTCTTTTCTAAATAAACGACAGACACCATGTTTTATATTGGATGTGCCCAGTAGTTGCAATCACCGACAt < 2:2095039/147‑1 (MQ=255)
cAACGCGGTCACGGCCATCAAATGGGCGTGCGGTCATTGGCACCGGAACTACCGGACCTTCTTCAATCTTAACGA‑TTTTTTTCTGTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACAt > 1:796281/1‑150 (MQ=255)
gTCACGGCCATCAAATGGGCGTGCGGTCATTGGCACCGGAACTACCGGACCTTCTTCAATCTTAACGA‑TTTTTTTCTGTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATa > 1:2706557/1‑150 (MQ=255)
cACGGCCATCAAATGGGCGTGCGGTCATTGGCACCGGAACTACCGGACCTTCTTCAATCTTAACGA‑TTTTTTTCTGTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGAATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGc > 2:704396/1‑150 (MQ=255)
aTCAAATGGGCGTGCGGTCATTGGCACCGGAACTACCGGACCTTCTTCAATCTTAACGA‑TTTTTTTCTGTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGAc > 2:3582760/1‑150 (MQ=255)
aTCAAATGGGCGTGCGGTCATTGGCACCGGAACTACCGGACCTTCTTCAATCTTAACGA‑TTTTTTTCTGTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGAc > 1:1266214/1‑150 (MQ=255)
gggCGTGCGGTCATTGGCACCGGAACTACCGGACCTTCTTCAATCTTAACGA‑TTTTTTTCTGTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGc < 2:604126/150‑1 (MQ=255)
gggCGTGCGGTCATTGGCACCGGAACTACCGGACCTTCTTCAATCTTAACGA‑TTTTTTTCTGTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGc < 2:2441904/150‑1 (MQ=255)
ggCGTGCGGTCATTGGCACCGGAACTACCGGACCTTCTTCAATCTTAACGA‑TTTTTTTCTGTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGAATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCa > 2:3301780/1‑150 (MQ=255)
cGTGCGGTCATTGGCACCGGAACTACCGGACCTTCTTCAATCTTAACGA‑TTTTTTTCTGTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAAc < 2:2995591/150‑1 (MQ=255)
cGTGCGGTCATTGGCACCGGAACTACCGGACCTTCTTCAATCTTAACGA‑TTTTTTTCTGTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGAATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAAc > 1:3770713/1‑150 (MQ=255)
gTGCGGTCATTGGCACCGGAACTACCGGACCTTCTTCAATCTTAACGA‑TTTTTTTCTGTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAAcc < 1:3571054/150‑1 (MQ=255)
gTGCGGTCATTGGCACCGGAACTACCGGACCTTCTTCAATCTTAACGA‑TTTTTTTCTGTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAAcc < 2:247759/150‑1 (MQ=255)
gCGGTCATTGGCACCGGAACTACCGGACCTTCTTCAATCTTAACGA‑TTTTTTTCTGTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCgg > 2:2347643/1‑150 (MQ=255)
gCGGTCATTGGCACCGGAACTACCGGACCTTCTTCAATCTTAACGA‑TTTTTTTCTGTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGAATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCgg < 2:2709054/150‑1 (MQ=255)
cGGTCATTGGCACCGGAACTACCGGACCTTCTTCAATCTTAACGA‑TTTTTTTCTGTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCggg > 2:4132138/1‑150 (MQ=255)
ggTCATTGGCACCGGAACTACCGGACCTTCTACAATCTTAACGA‑TTTTTTTCTGTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGc > 2:559530/1‑150 (MQ=255)
ttGGCACCGGAACTACCGGACCTTCTTCAATCTTAACGA‑TTTTTTTCTGTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCtt < 1:2773768/150‑1 (MQ=255)
ttGGCACCGGAACTACCGGACCTTCTTCAATCTTAACGA‑TTTTTTTCTGTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGAATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCtt < 2:3410672/150‑1 (MQ=255)
ggCACCGGAACTACCGGACCTTCTTCAATCTTAACGA‑TTTTTTTCTGTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGt < 1:958869/150‑1 (MQ=255)
gCACCGGAACTACCGGACCTTCTTCAATCTTAACGA‑TTTTTTTCTGTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGAATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGtt < 2:709603/150‑1 (MQ=255)
cACCGGAACTACCGGACCTTCTTCAATCTTAACGATTTTTTTTCTGTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGtt > 1:2335632/1‑150 (MQ=255)
aCCGGAACTACCGGACCTTCTTCAATCTTAACGA‑TTTTTTTCTGTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTc < 1:2283234/150‑1 (MQ=255)
cctgAACTTCCGGTCCTTCTTCAATCTTAAAGA‑TTTTTTTCTGTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCTTCACCGACATCAAGATTGCTGATGTCTTTGAGCTACCGGGCATCTTGTTTCa < 2:2685090/147‑1 (MQ=255)
ccGGAACTACCGGACCTTCTTCAATCTTAACGA‑TTTTTTTCTGTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCa < 1:316259/150‑1 (MQ=255)
cGGAACTACCGGACCTTCTTCAATCTTAACGA‑TTTTTTTCTGTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAg < 2:4187590/150‑1 (MQ=255)
cGGAACTACCGGACCTTCTTCAATCTTAACGA‑TTTTTTTCTGTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGAATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAg > 1:4538667/1‑150 (MQ=255)
cGGAACTACCGGACCTTCTTCAATCTTAACGA‑TTTTTTTCTGTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGAATGTGCCCAGTAGTTGACATCACCGAAATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAg < 1:3703861/150‑1 (MQ=255)
ggAACTACCGGACCTTCTTCAATCTTAACGA‑TTTTTTTCTGTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAgg < 2:2238564/150‑1 (MQ=255)
ggAACTACCGGACCTTCTTCAATCTTAACGA‑TTTTTTTCTGTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAgg > 2:3699046/1‑150 (MQ=255)
aCCGGACCTTCTTCAATCTTAACGA‑TTTTTTTCTGTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCt < 1:1090503/150‑1 (MQ=255)
ggACCTTCTTCAATCTTAACGATTTTTTTTCTGTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCttt > 2:4467178/1‑150 (MQ=255)
cttcttCAATCTTAACGA‑TTTTTTTCTGTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCAt < 1:1520642/150‑1 (MQ=255)
ttcttcAATCTTAACGA‑TTTTTTTCTGTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATc > 1:2504834/1‑150 (MQ=255)
ttcttcAATCTTAACGA‑TTTTTTTCTGTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATc > 1:4237463/1‑150 (MQ=255)
cttcAATCTTAACGA‑TTTTTTTCTGTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGa > 2:1867884/1‑150 (MQ=255)
cttcAATCTTAACGA‑TTTTTTTCTGTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGa < 2:85850/150‑1 (MQ=255)
ttcTATCTTAACTA‑TTTTTTTCTGTTCTAAATCAACGACCGCCACCTGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGTTGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGaa < 1:672286/150‑1 (MQ=255)
ttcAATCTTAACGA‑TTTTTTTCTGTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGaa < 1:1682384/150‑1 (MQ=255)
cAATCTTAACGA‑TTTTTTTCTGTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAAt > 1:848005/1‑150 (MQ=255)
aTCTTAACGA‑TTTTTTTCTGTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATaa > 2:2028161/1‑150 (MQ=255)
aTCTTAACGA‑TTTTTTTCTGTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATaa > 2:1519313/1‑150 (MQ=255)
cTTAACGA‑TTTTTTTCTGTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAAcc < 2:276991/150‑1 (MQ=255)
cTTAACGA‑TTTTTTTCTGTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAAcc > 1:2430302/1‑150 (MQ=255)
tAACGA‑TTTTTTTCTGTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTa > 1:3962439/1‑150 (MQ=255)
tAACGA‑TTTTTTTCTGTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTa > 2:1728208/1‑150 (MQ=255)
tAACGA‑TTTTTTTCTGTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGAATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTa > 1:2827261/1‑150 (MQ=255)
aaCGA‑TTTTTTTCTGTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTAc > 1:1632337/1‑150 (MQ=255)
aaCGA‑TTTTTTTCTGTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTAc < 2:1002802/150‑1 (MQ=255)
gatttttttttCTGTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTACg > 2:1557792/5‑150 (MQ=255)
cGA‑TTTTTTTCTGTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTACgg > 1:292379/1‑150 (MQ=255)
tttttttCTGTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTACGGTCa < 1:1093505/150‑1 (MQ=255)
tttttttCTGTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTACGGTCa < 1:3875426/150‑1 (MQ=255)
ttttttCTGTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTACGGTCAg > 1:4248372/1‑150 (MQ=255)
ttttCTGTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTACGGTCAgcg < 2:4154072/150‑1 (MQ=255)
ttttCTGTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTACGGTCAgcg < 2:1969590/150‑1 (MQ=255)
tttCTGTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTACGGTCAgcgg < 2:2631742/150‑1 (MQ=255)
cTGTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTACGGTCAGCGGCGt > 1:3310877/1‑150 (MQ=255)
tGTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTACGGTCAGCGGCGTg < 1:26387/150‑1 (MQ=255)
gTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCACCCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTACGGTCAGCGGCGTgg > 1:1496510/1‑150 (MQ=255)
cTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTACGGTCAGCGGCGTGGTaa > 2:1185984/1‑150 (MQ=255)
cTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTACGGTCAGCGGCGTGGTaa > 1:4381126/1‑150 (MQ=255)
tAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTACGGTCAGCGGCGTGGTAAt < 2:958932/150‑1 (MQ=255)
aaaTCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTACGGTCAGCGGCGTGGTAATc < 2:898934/150‑1 (MQ=255)
aaaTCAACGACCGCCACCAGGTTTTCGATGGAATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTACGGTCAGCGGCGTGGTAATc > 1:3640980/1‑150 (MQ=255)
aaTCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTACGGTCAGCGGCGTGGTAATCa < 1:4033282/150‑1 (MQ=255)
aaTCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTACGGTCAGCGGCGTGGTAATCa < 2:1221201/150‑1 (MQ=255)
aaTCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTACGGTCAGCGGCGTGGTAATCa < 2:1220021/150‑1 (MQ=255)
aaTCAACGACCGCCACCAGGTTTTCGATGGAATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTACGGTCAGCGGCGTGGTAATCa > 1:2819473/1‑150 (MQ=255)
tCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTACGGTCAGCGGCGTGGTAATCACt < 2:598689/150‑1 (MQ=255)
cAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTACGGTCAGCGGCGTGGTAATCACtt > 2:2692814/1‑150 (MQ=255)
aaCGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTACGGTCAGCGGCGTGGTAATCACttt < 1:1852353/150‑1 (MQ=255)
aaCGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTACGGTCAGCGGCGTGGTAATCACttt > 2:619701/1‑150 (MQ=255)
aaCGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTACGGTCAGCGGCGTGGTAATCACttt < 1:2578773/150‑1 (MQ=255)
aCGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTACGGTCAGCGGCGTGGTAATCACtttt < 2:1749747/150‑1 (MQ=255)
ccGCCACCAGGTTTTCGATGGAATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTACGGTCAGCGGCGTGGTAATCACTTTTTTCg < 1:2122899/150‑1 (MQ=255)
cGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTACGGTCAGCGGCGTGGTAATCACTTTTTTCGc < 1:4125999/150‑1 (MQ=255)
accaGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTACGGTCAGCGGCGTGGTAATCACTTTTTTCGCATCa < 1:2798097/150‑1 (MQ=255)
accaGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTACGGTCAGCGGCGTGGTAATCACTTTTTTCGCATCa < 2:4403020/150‑1 (MQ=255)
accaGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTACGGTCAGCGGCGTGGTAATCACTTTTTTCGCATCa > 1:3341861/1‑150 (MQ=255)
accaGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTACGGTCAGCGGCGTGGTAATCACTTTTTTCGCATCa > 2:3161232/1‑150 (MQ=255)
ccaGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTACGGTCAGCGGCGTGGTAATCACTTTTTTCGCATCAg > 2:304095/1‑150 (MQ=255)
aGGTTTTCGTTGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCTTCGAAATATCCTACGGTCAGCGGCGTGGTAATCACTTTTTTCGCATCAGTa < 1:3032407/150‑1 (MQ=255)
gTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTACGGTCAGCGGCGTGGTAATCACTTTTTTCGCATCAGTAAt > 1:671032/1‑150 (MQ=255)
gTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTACGGTCAGCGGCGTGGTAATCACTTTTTTCGCATCAGTAAt > 2:1631091/1‑150 (MQ=255)
gATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTACGGTCAGCGGCGTGGTAATCACTTTTTTCGCATCAGTAATACCGCGTttct > 1:4280044/1‑150 (MQ=255)
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AATGATTTGCATAGGCTTAACTGCCGGAGCAACGCGGTCACGGCCATCAAATGGGCGTGCGGTCATTGGCACCGGAACTACCGGACCTTCTTCAATCTTAACGA‑TTTTTTTCTGTTCTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTACGGTCAGCGGCGTGGTAATCACTTTTTTCGCATCAGTAATACCGCGTTTCT > CP009273/1444590‑1444888
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
