Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
A1 F50 I1 R2
|
775 |
327.3 |
10718052 |
97.2% |
10417946 |
138.8 |
Breseq alignment
BRESEQ :: Evidence
|
evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
RA |
NZ_CP025268 |
400,598 |
+G |
pseudogene (162/260 nt) |
iraP → |
anti‑adapter protein IraP |
|
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
* | NZ_CP025268 | 400,594 | 1 | . | G | 97.7%
| 433.6
/ 3.0
| 130 | pseudogene (158/260 nt) | iraP | anti‑adapter protein IraP |
Reads supporting (aligned to +/- strand): ref base . (3/0); new base G (60/67); total (63/67) |
Fisher's exact test for biased strand distribution p-value = 1.11e-01 |
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.94e-01 |
Only 100 of 145 total aligned reads displayed.
AGTTGTTATTTAAGCTTGCCCAAAAAGAAGAAGAGTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGA‑GGGG‑CGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTAAAAAGTTAATCTTTTCAACAGCTGTCATAAAGT > NZ_CP025268/400456‑400728
|
aGTTGTTATTTAAGCTTGCCCAAAAAGAAGAAGAGTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTaga‑g > 2:354746/1‑140 (MQ=255)
gttgttATTTAAGCTTGCCCAAAAAGAAGAAGAGTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCACTGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGA‑gg < 2:4688308/140‑1 (MQ=255)
gttgttATTTAAGCTTGCCCAAAAAGAAGAAGAGTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGA‑gg < 2:4927418/140‑1 (MQ=255)
ttATTTAAGCTTGCCCAAAAAGAAGAAGAGTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGA‑gggggc > 2:881234/1‑138 (MQ=255)
tctttAAGCTTGCCCAAAAAGAAGAAGAGTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTTGCAATATGGCGAAAAATGACCAACAGCGGTTGATTGATCAGGTAGA‑gggggcg < 2:3186820/138‑4 (MQ=255)
tATTTAAGCTTGCCCAAAAAGAAGAAGAGTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGA‑gggggcg < 1:717009/140‑4 (MQ=255)
tATTTAAGCTTGCCCAAAAAGAAGAAGAGTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGA‑gggggcg < 1:4674370/140‑4 (MQ=255)
aaGCTTGCCCAAAAAGAAGAAGAGCCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGCTTATCGTCACTGCAATGCCTCGCAATCTGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGCAGAGGGGG‑CGCTGTa < 1:4525648/140‑1 (MQ=255)
aGCTTGCCCAAAAAGAAGAAGAGTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGGG‑CGCTGTAc < 1:2818345/140‑1 (MQ=255)
aGCTTGCCCAAAAAGAAGAAGAGTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGGG‑CGCTGTAc < 1:5334576/140‑1 (MQ=255)
aGCTTGCCCAAAAAGAAGAAGAGTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGGG‑CGCTGTAc < 2:4883239/140‑1 (MQ=255)
aGCTTGCCCAAAAAGAAGAAGAGTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGGG‑CGCTGTAc > 1:1162833/1‑140 (MQ=255)
aGCTTGCCCAAAAAGAAGAAGAGTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGGG‑CGCTGTAc < 2:4469211/140‑1 (MQ=255)
aGCTTGCCCAAAAAGAAGAAGAGTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGGG‑CGCTGTAc < 2:4883704/140‑1 (MQ=255)
aGCTTGCCCAAAAAGAAGAAGAGTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGGG‑CGCTGTAc < 2:4882908/140‑1 (MQ=255)
aGCTTGCCCAAAAAGAAGAAGAGTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGA‑gggggcg > 2:2800047/1‑131 (MQ=255)
aGCTTGCCCAAAAAGAAGAAGAGTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGA‑gggggcg < 1:2800047/134‑4 (MQ=255)
aGCTTGACCAAAAAGAAGAAGAGTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAAGATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGGG‑CGCTGTAc < 2:4680614/140‑1 (MQ=255)
gCTTGCCCAAAAAGAAGAAGAGTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGGG‑CGCTGTACg < 1:2045102/140‑1 (MQ=255)
gCTTGCCCAAAAAGAAGAAGAGTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGGG‑CGCTGTACg < 1:2715209/140‑1 (MQ=255)
ttGCCCAAAAAGAAGAAGAGTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGGG‑CGCTGTACGAg > 1:2303553/1‑140 (MQ=255)
gCCCAAAAAGAAGAAGAGTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGGG‑CGCTGTACGAGGt > 2:1228616/1‑140 (MQ=255)
cccAAAAAGAAGAAGAGTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGGG‑CGCTGTACGAGGTa > 2:1001935/1‑140 (MQ=255)
cccAAAAAGAAGAAGAGTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGGG‑CGCTGTACGAGGTa > 2:4574609/1‑140 (MQ=255)
cccAAAAAGAAGAAGAGTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGGG‑CGCTGTACGAGGTa > 1:4212065/1‑140 (MQ=255)
cccAAAAAGAAGAAGAGTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTGGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGGG‑CGCTGTACGAGGTa > 1:740278/1‑140 (MQ=255)
gaagaagaGTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGGG‑CGCTGTACGAGGTAAAGCCCGa < 2:2543409/140‑1 (MQ=255)
agaagaGTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGGG‑CGCTGTACGAGGTAAAGCCCGATg > 2:2981335/1‑140 (MQ=255)
agagTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGGG‑CGCTGTACGAGGTAAAGCCCGATGCCa < 2:1075557/140‑1 (MQ=255)
agTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGGG‑CGCTGTACGAGGGAAAGCCCGATGCCAGc > 2:1149841/1‑140 (MQ=255)
ttCGAAAGATCTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCTCTGCACTGCTTCGCAATATAGCGCAAAATGACCAACAGCGGTTGATGCATCAGGTGGAGGGGG‑CGCTGTACGATGTATAGCCCGATGCCAGCa < 2:2203755/139‑1 (MQ=255)
tCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGA‑ggggg < 2:435232/109‑2 (MQ=255)
tCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGA‑ggggg > 1:435232/1‑108 (MQ=255)
aaGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGGG‑CGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCt < 1:1537481/140‑1 (MQ=255)
gAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGGG‑CGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTga < 1:4982378/140‑1 (MQ=255)
gAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGGG‑CGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTga < 1:4110735/140‑1 (MQ=255)
aCTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGGG‑CGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTgacg < 2:1779559/140‑1 (MQ=255)
aCTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGGG‑CGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTgacg > 2:2137643/1‑140 (MQ=255)
cTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGGG‑CGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTgacga < 2:3223963/140‑1 (MQ=255)
cTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGGG‑CGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTgacga < 2:2173680/140‑1 (MQ=255)
tgtgtgCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGGG‑CGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTgacgac > 1:402205/1‑140 (MQ=255)
tgtgCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGGG‑CGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGAcgacga > 1:2257608/1‑140 (MQ=255)
gtgCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGGG‑CGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGAt > 1:435408/1‑140 (MQ=255)
tgCGCAGGTAGAAGCTTTGGGGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCGGGTAGAGGGGG‑CGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATa < 2:2637169/140‑1 (MQ=255)
tgCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGGG‑CGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATa > 1:4892053/1‑140 (MQ=255)
tgCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGGG‑CGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATa < 1:5193534/140‑1 (MQ=255)
gcAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGGG‑CGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACgg > 1:4401226/1‑140 (MQ=255)
gcAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGGG‑CGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACgg > 2:1508412/1‑140 (MQ=255)
aGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGGG‑CGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAg < 2:2000584/140‑1 (MQ=255)
ggTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGGG‑CGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAgc < 1:1324619/140‑1 (MQ=255)
ggTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGGG‑CGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAgc > 2:5123272/1‑140 (MQ=255)
tAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGGG‑CGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAgctg > 2:3226199/1‑140 (MQ=255)
tAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGGG‑CGCTGTACGAGGTAAAGCCCGACGCCAGCATTCCTGACGACGATACGGAgctg > 1:1603759/1‑140 (MQ=255)
tAGAAGCTTTGGAGATCATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAATAGCGGTTGATTGATCAGGTAGAGGGGG‑CGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAgcag < 1:2976152/140‑3 (MQ=255)
aaGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGGG‑CGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGctgctg < 2:1433557/140‑1 (MQ=255)
gCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGGG‑CGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTgcg < 1:1687233/140‑1 (MQ=255)
ttGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGGG‑CGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGa < 2:652432/140‑1 (MQ=255)
tGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGGG‑CGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGAt > 1:2081760/1‑140 (MQ=255)
tGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGGG‑CGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGAt > 1:1566478/1‑140 (MQ=255)
ggAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGGG‑CGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGAtt < 1:1450232/140‑1 (MQ=255)
ggAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGGG‑CGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGAtt < 1:3060133/140‑1 (MQ=255)
ggAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGGG‑CGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGAtt < 1:3060184/140‑1 (MQ=255)
aTTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGGG‑CGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGt < 1:1001935/140‑1 (MQ=255)
ttATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGGG‑CGCTGTACGAGGTAAAGCCCGGTGCCAGCATTCCTGACGACGATACGGTGCTGCTGCGCGATTACGTa < 2:740278/140‑1 (MQ=255)
aTCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGGG‑CGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTaaa < 2:5030077/140‑1 (MQ=255)
cGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGGG‑CGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAaaga < 1:1488559/140‑1 (MQ=255)
aCTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGGG‑CGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGtt < 1:1250228/140‑1 (MQ=255)
tGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGGG‑CGCTGTACGAGGTAAAGCCCGACGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTAt < 2:1603759/140‑1 (MQ=255)
tGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGAGCAGGTAGAGGGGG‑CGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGGTGACGGAAAGAAGTTAt > 1:3897243/1‑140 (MQ=255)
tGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGGG‑CGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAg > 1:2123906/1‑140 (MQ=255)
tGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGGG‑CGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAg > 1:2123179/1‑140 (MQ=255)
cTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGGG‑CGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCa > 2:491083/1‑140 (MQ=255)
cTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGGG‑CGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCa > 1:4487045/1‑140 (MQ=255)
cTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGGG‑CGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCa > 1:444620/1‑140 (MQ=255)
cGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGGG‑CGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATa < 1:429680/97‑1 (MQ=255)
cGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGGG‑CGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATa > 2:429680/1‑97 (MQ=255)
cAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGGG‑CGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTc > 1:1762514/1‑140 (MQ=255)
tatGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGGG‑CGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGt > 1:3641981/1‑139 (MQ=255)
tatGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGGG‑CGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGt > 1:3641902/1‑139 (MQ=255)
tatGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGGG‑CGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGt < 2:3641981/139‑1 (MQ=255)
cgcAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGGG‑CGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTaa > 1:3553928/1‑140 (MQ=255)
cgcAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGGG‑CGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTaa > 2:398729/1‑140 (MQ=255)
cgcAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGGG‑CGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTaa > 1:823160/1‑140 (MQ=255)
cgcAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGGG‑CGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTaa > 2:1240984/1‑140 (MQ=255)
aaTGACCAACAGCGGTTGATTGATCAGGTAGAGGGGG‑CGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTAAAAAGt > 2:3107158/1‑140 (MQ=255)
tGACCAACAGCGGTTGATTGATCAGGTAGAGGGGG‑CGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTAAAAAGTTa < 2:3547877/140‑1 (MQ=255)
tGACCAACAGCGGTTGATTGATCAGGTAGAGGGGG‑CGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTAAAAAGTTa < 1:4764139/140‑1 (MQ=255)
ccAACAGCGGTTGATTGATCAGGTAGAGGGGG‑CGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTAAAAAGTTAATc > 2:2029946/1‑140 (MQ=255)
aaCAGCGGTTGATTGATCAGGTAGAGGGGG‑CGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGGGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTAAAAAGTTAATCtt < 1:3567171/140‑1 (MQ=255)
aaCAGCGGTTGATTGATCAGGTAGAGGGGG‑CGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTAAAAAGTTAATCtt < 1:3731048/140‑1 (MQ=255)
aGCGGTTGATTGATCAGGTAGAGGGGG‑CGCTGTACg < 1:3208673/36‑1 (MQ=255)
ggTTGATTGATCAGTTAGAGGGGG‑CGCGGTACGAGGGAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTAAAAAGTTAATCTTTTCAAc < 1:3458890/140‑1 (MQ=255)
gTTGATTGATCAGGTAGAGGGGG‑AGCTGTACGAGGGAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTAAAAAGTTAATCTTTTCAACa < 2:5226426/140‑1 (MQ=255)
ttgattgaTCAGGTAGAGGGGG‑CGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTAAAAAGTTAATCTTTTCAACAg < 2:2081760/140‑1 (MQ=255)
ttgattgaTCAGGTAGAGGGGG‑CGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTAAAAAGTTAATCTTTTCAACAg < 1:1071027/140‑1 (MQ=255)
ttgattgaTCAGGTAGAGGGGG‑CGCTGTACGAGCTCAAGCCCGATGCGAGCATTCCTGACGACGATACGGAGCTGATGCGCGCTTACGTACAGAAGTTATTGACGCATCCTCGTCAGTAAAAAGTTAATCTTTTCAAccg < 2:1377486/140‑3 (MQ=255)
atCAGGTAGAGGGGG‑CGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTAAAAAGTTAATCTTTTCAACAGCTGTCAt > 1:2718063/1‑140 (MQ=255)
aGGTAGAGGGGG‑CGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTAAAAAGTTAATCTTTTCAACAGCTGTCATaaa > 2:3105372/1‑140 (MQ=255)
gTAGAGGGGG‑CGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTAAAAAGTTAATCTTTTCAACAGCTGTCATAAAGt > 1:931129/1‑140 (MQ=255)
gTAGA‑GGGGACGCTGTACGAGGTACAGCTCGATGCCAGCATTCCTGACGACGATACGGAGTGGCTGCGCGTGTGCGCAAAGATGTTATAGAAGCTTCCTCGTCAGTAAAAAATTAATGTGTTCAACAGCTGTCTTAAAGt > 2:3795441/1‑140 (MQ=255)
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AGTTGTTATTTAAGCTTGCCCAAAAAGAAGAAGAGTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGA‑GGGG‑CGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTAAAAAGTTAATCTTTTCAACAGCTGTCATAAAGT > NZ_CP025268/400456‑400728
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Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GTTGTTATTTAAGCTTGCCCAAAAAGAAGAAGAGTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGA‑GGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTAAAAAGTTAATCTTTTCAACAGCTGTCATAAAGTTGTCACGGCCGAGACTTATA > NZ_CP025268/400457‑400748
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GTTGTTATTTAAGCTTGCCCAAAAAGAAGAAGAGTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTAC > SRR14920189.1165477/1‑151 (MQ=60)
GTTATTTAAGCTTGCCCAAAAAGAAGAAGAGTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAG > SRR14920189.2308825/1‑151 (MQ=60)
TATTTAAGCTTGCCCAAAAAGAAGAAGAGTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGT < SRR14920189.3794664/151‑1 (MQ=60)
TATTTAAGCTTGCCCAAAAAGAAGAAGAGTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGT < SRR14920189.2806331/151‑1 (MQ=60)
TATTTAAGCTTGCCCAAAAAGAAGAAGAGTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGT < SRR14920189.718811/151‑1 (MQ=60)
TATTTAAGCTTGCCCAAAAAGAAGAAGAGTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGT < SRR14920189.4686092/151‑1 (MQ=60)
ATTTAAGCTTGCCCAAAAAGAAGAAGAGTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTA > SRR14920189.4222457/1‑151 (MQ=60)
ATTTAAGCTTGCCCAAAAAGAAGAAGAGTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTA > SRR14920189.5039790/1‑151 (MQ=60)
ATTTAAGCTTGCCCAAAAAGAAGAAGAGTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTGGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTA > SRR14920189.742133/1‑151 (MQ=60)
AAGCTTGCCCAAAAAGAAGAAGAGCCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGCTTATCGTCACTGCAATGCCTCGCAATCTGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGCAGAGGGG‑GCGCTGTACGAGGTAAAGC < SRR14920189.4536896/151‑1 (MQ=60)
AGCTTGCCCAAAAAGAAGAAGAGTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCC < SRR14920189.314861/151‑1 (MQ=60)
AGCTTGCCCAAAAAGAAGAAGAGTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCC < SRR14920189.2824647/151‑1 (MQ=60)
AGCTTGCCCAAAAAGAAGAAGAGTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCC < SRR14920189.5347626/151‑1 (MQ=60)
gaggtacgcgagatcctgtctttttttcaagcagaagacggcatacgagattagctgcagtctcgtgggctcggagatgtgtataagagacagAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCC < SRR14920189.3216433/58‑1 (MQ=60)
GCTTGCCCAAAAAGAAGAAGAGTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCC < SRR14920189.2049820/151‑1 (MQ=60)
GCTTGCCCAAAAAGAAGAAGAGTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCC < SRR14920189.2721268/151‑1 (MQ=60)
GCCCAAAAAGAAGAAGAGTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATG < SRR14920189.4423260/151‑1 (MQ=60)
AAGAAGAAGAGTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGctgtctcttatacacatctc > SRR14920189.436346/1‑131 (MQ=60)
AGAGTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGAC < SRR14920189.1390650/151‑1 (MQ=60)
AGTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGA > SRR14920189.2246172/1‑151 (MQ=60)
GTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGAC > SRR14920189.403238/1‑151 (MQ=60)
GTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGAC < SRR14920189.1768911/151‑1 (MQ=60)
GTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGAC > SRR14920189.2093580/1‑151 (MQ=60)
CGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGA > SRR14920189.2262792/1‑151 (MQ=60)
GAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGAT > SRR14920189.436522/1‑151 (MQ=60)
AAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATA > SRR14920189.4904414/1‑151 (MQ=60)
AAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATAC < SRR14920189.1540977/151‑1 (MQ=60)
AGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACG > SRR14920189.702960/1‑151 (MQ=60)
GAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGG > SRR14920189.4412049/1‑151 (MQ=60)
GAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGG < SRR14920189.4120887/151‑1 (MQ=60)
GAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGG < SRR14920189.4994891/151‑1 (MQ=60)
GTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGTCGACGATACGGAGCTG > SRR14920189.4364216/1‑151 (MQ=60)
GTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGACGCCAGCATTCCTGACGACGATACGGAGCTG > SRR14920189.1607413/1‑151 (MQ=60)
ctcgtgggctcggagatgtgtataagagacagCTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTG < SRR14920189.430780/119‑1 (MQ=60)
TGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTG < SRR14920189.5206382/151‑1 (MQ=60)
GGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGAT > SRR14920189.2086587/1‑151 (MQ=60)
GGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGAT < SRR14920189.1327599/151‑1 (MQ=60)
GGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGAT > SRR14920189.1570050/1‑151 (MQ=60)
TAGAAGCTTTGGAGATCATCGTCACTGCAATCCTTCGCAATATGGCGCAAAATGACCAATAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCAGCTGCGCGATTA < SRR14920189.2983213/151‑1 (MQ=60)
GCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAA < SRR14920189.1691096/151‑1 (MQ=60)
GGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAG < SRR14920189.3067390/151‑1 (MQ=60)
GGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAG < SRR14920189.1453536/151‑1 (MQ=60)
GGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAG < SRR14920189.3067441/151‑1 (MQ=60)
AGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTT > SRR14920189.3638639/1‑151 (MQ=60)
ATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTAT < SRR14920189.1004269/151‑1 (MQ=60)
ATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGAGCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGGTGACGGAAAGAAGTTAT > SRR14920189.3906531/1‑151 (MQ=60)
CGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAG < SRR14920189.1491949/151‑1 (MQ=60)
CGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAG > SRR14920189.2128111/1‑151 (MQ=60)
CGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAG > SRR14920189.2128841/1‑151 (MQ=60)
TCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCA > SRR14920189.4498218/1‑151 (MQ=60)
TCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCA > SRR14920189.445759/1‑151 (MQ=60)
ACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATC < SRR14920189.1253064/151‑1 (MQ=60)
CTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGGATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCC > SRR14920189.2983814/1‑151 (MQ=60)
GCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTC > SRR14920189.1766539/1‑151 (MQ=60)
ATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTC > SRR14920189.3650513/1‑151 (MQ=60)
ATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTC > SRR14920189.3650433/1‑151 (MQ=60)
TCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTAA > SRR14920189.825160/1‑151 (MQ=60)
TCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTAA > SRR14920189.2573268/1‑151 (MQ=60)
TCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTAA > SRR14920189.1198590/1‑151 (MQ=60)
TCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTAA > SRR14920189.3562321/1‑151 (MQ=60)
TCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGA‑GGGTGCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTAA > SRR14920189.4118862/1‑151 (MQ=60)
GGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTAAGAAGTTAAT > SRR14920189.1602764/1‑151 (MQ=60)
GCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTAAAAAGTTAATC < SRR14920189.1511842/151‑1 (MQ=60)
TGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTAAAAAGTTAATCTTTTCAAC < SRR14920189.4851410/151‑1 (MQ=60)
TGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTAAAAAGTTAATCTTTTCAAC < SRR14920189.4776242/151‑1 (MQ=60)
AACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGGGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTAAAAAGTTAATCTTTTCAACAGCTG < SRR14920189.3575585/151‑1 (MQ=60)
AACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTAAAAAGTTAATCTTTTCAACAGCTG < SRR14920189.3739753/151‑1 (MQ=60)
AACAGCGGTTGACTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTAAAAAGTTAATCTTTTCAACAGCTG < SRR14920189.4585960/151‑1 (MQ=60)
GCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTAAAAAGTTAATCTTTTCAACAGCTGTCAT > SRR14920189.2724124/1‑151 (MQ=60)
GGTTGATTGATCAGTTAGAGGGG‑GCGCGGTACGAGGGAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTAAAAAGTTAATCTTTTCAACAGCTGTCATAA < SRR14920189.3467115/151‑1 (MQ=60)
GGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTAAAAAGTTAATCTTTTCAACAGCTGTCATAA < SRR14920189.3467193/151‑1 (MQ=60)
TTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTAAAAAGTTAATCTTTTCAACAGCTGTCATAAAG < SRR14920189.1073485/151‑1 (MQ=60)
TTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTAAAAAGTTAATCTTTTCAACAGCTGTCATAAAG < SRR14920189.4277671/151‑1 (MQ=60)
TTGATTGATCAGGTAGAGGGG‑GCGCCGTACGAGGTAAAGCCCGCTGCCAGCCTTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTAAAAAGTTAATCTTTTCAACAGCTGTCATAAAG < SRR14920189.4884615/151‑1 (MQ=60)
TGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTAAAAAGTTAATCTTTTCAACAGCTGTCATAAAGT > SRR14920189.933323/1‑151 (MQ=60)
TGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTAAAAAGTTAATCTTTTCAACAGCTGTCATAAAGT > SRR14920189.933049/1‑151 (MQ=60)
TTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTAAAAAGTTAATCTTTTCAACAGCTGTCATAAAGTTGT > SRR14920189.315069/1‑151 (MQ=60)
ATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTAAAAAGTTAATCTTTTCAACAGCTGTCATAAAGTTGTCAC > SRR14920189.4414386/1‑151 (MQ=60)
ATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTAAAAAGTTAATCTTTTCAACAGCTGTCATAAAGTTGTCAC > SRR14920189.4413671/1‑151 (MQ=60)
ATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTAAAAAGTTAATCTTTTCAACAGCTGTCATAAAGTTGTCAC > SRR14920189.1035460/1‑151 (MQ=60)
GGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTAAAAAGTTAATCTTTTCAACAGCTGTCATAAAGTTGTCACGGCC > SRR14920189.4001695/1‑151 (MQ=60)
GGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTAAAAAGTTAATCTTTTCAACAGCTGTCATAAAGTTGTCACGGCC > SRR14920189.3895594/1‑151 (MQ=60)
GGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTAAAAAGTTAATCTTTTCAACAGCTGTCATAAAGTTGTCACGGCC > SRR14920189.2940733/1‑151 (MQ=60)
GGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTAAAAAGTTAATCTTTTCAACAGCTGTCATAAAGTTGTCACGGCC > SRR14920189.2483673/1‑151 (MQ=60)
GTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTAAAAAGTTAATCTTTTCAACAGCTGTCATAAAGTTGTCACGGCCG > SRR14920189.4737961/1‑151 (MQ=60)
agGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTAAAAAGTTAATCTTTTCAACAGCTGTCATAAAGTTGTCACGGCCGAGAC < SRR14920189.4333506/149‑1 (MQ=60)
G‑GGG‑GCGCTGTACGAGGTAAAGCCCGAGGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTAAAAAGTTAATCTTTTCAACAGCTGTCATAAAGTTGTCACGGCCGAGACT < SRR14920189.883346/151‑1 (MQ=60)
GGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTAAAAAGTTAATCTTTTCAACAGCTGTCATAAAGTTGTCACGGCCGAGACTT < SRR14920189.492343/151‑1 (MQ=60)
GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTGATTGAAGCATCCTCGTCAGTAAAAAGTTAATCTTTTCAACAGCTGTCATAAAGTTGTCACGGCCGAGACTTATA > SRR14920189.4253586/1‑151 (MQ=60)
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GTTGTTATTTAAGCTTGCCCAAAAAGAAGAAGAGTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGA‑GGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTAAAAAGTTAATCTTTTCAACAGCTGTCATAAAGTTGTCACGGCCGAGACTTATA > NZ_CP025268/400457‑400748
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Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |