Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F21 I1 R7
|
781 |
589.5 |
21734725 |
98.3% |
21365234 |
134.3 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NZ_CP025268 |
2,997,620 |
T→C |
*144* (TAA→TAG) |
CXP41_RS24400 ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP025268 | 2,997,620 | 0 | T | C | 100.0%
| 112.3
/ NA
| 35 | *144* (TAA→TAG) | CXP41_RS24400 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (19/16); total (19/16) |
TGAAATAATAATGAAATATAATTAAAAATAAAATTTTTGCGTAAAAAAAATACCACAGGCATTAAAAAATCATGAGATGATTAAAATATTACAATTAGATTATATTCAAATCATTAAACTTGAGCCAGGGAGTTATAAGTCCTCAGGGCTTGCCAAAACAGAATTATTCATATCCAAAGAATGTGTTTCAAACATTTTTTCAACTAAATAATGTCTGGCTTGTTCGCAGATTTCGTTAACCTTGTCAGGGGAGAAACAATGATTATTA > NZ_CP025268/2997488‑2997755
|
tgaAATAATAATGAAATATAATTAAAAATAAAATTTTTGCGT‑AAAAAAATACCACAGGCATTAAAAAATCATGAGATGATTAAAATATTACAATTAGATTATATTCAAATCATTAAACTTGAGCCAGGGAGCTATAAGTc > 1:5565903/1‑140 (MQ=255)
aatGAAATATAATTAAAAATAAAATTTTTGCGT‑AAAAAAATACCACAGGCATTAAAAAATCATGAGATGATTAAAATATTACAATTAGATTATATTCAAATCATTAAACTTGAGCCAGGGAGCTATAAGTCCTCAGGTCt > 1:4286493/1‑140 (MQ=255)
aatGAAATATAATTAAAAATAAAATTTTTGCGT‑AAAAAAATACCACAGGCATTAAAAAATCATGAGATGATTAAAATATTACAATTAGATTATATTCAAATCATTAAACTTGAGCCAGGGAGCTATAAGTCCTCAGGTCt > 1:4285867/1‑140 (MQ=255)
atatAATTAAAAATAAAATTTTTGCGT‑AAAAAAACACCACAGGCATTAAAAAATCATGAGATGATTAAAATATTACAATTAGATTATATTCAAATCATTAAACTTGAGCCAGGGAGCTATAAGTCCTCAGGGCTTGCCaa > 1:1569148/1‑140 (MQ=255)
aaaatTTTTGCGT‑AAAAAAATACCACAGGCATTAAAAAATCATGAGATGATTAAAATATTACAATTAGATTATATTCAAATCATTAAACTTGAGCCAGGGAGCTATAAGTCCTCAGGTCTTGCCAAAACAGAATTATTCa < 2:4285867/140‑1 (MQ=255)
aaaatTTTTGCGT‑AAAAAAATACCACAGGCATTAAAAAATCATGAGATGATTAAAATATTACAATTAGATTATATTCAAATCATTAAACTTGAGCCAGGGAGCTATAAGTCCTCAGGTCTTGCCAAAACAGAATTATTCa < 2:4286493/140‑1 (MQ=255)
ttttGCTT‑AAAAAAATACCACAGGCATTAAAAAATCATGAGATGATTAAAATATTACAATTAGATTATATTCAAATCATTAAACTTGAGCCAGGGAGCTATAAGTCCTCAGGGCTTGCCATAACAGAATTATTCATATcc < 2:2453627/140‑1 (MQ=255)
aTTAAAAAATCATGAGATGATTAAAATATTACAATTAGATTATATTCAAATCATTAAACTTGAGCCAGGGAGCTATAAGTCCTCAGGGCTTGCCAAAACAGAATTATTCATATCCAAAGAATGTGTTTCAAACAtttttt < 1:10040331/140‑1 (MQ=255)
aTTAAAAAATCATGAGATGATTAAAATATTACAATTAGATTATATTCAAATCATTAAACTTGAGCCAGGGAGCTATAAGTCCTCAGGGCTTGCCAAAACAGAATTATTCATATCCAAAGAATGTGTTTCAAACAtttttt < 1:9113430/140‑1 (MQ=255)
atTAAAATATTACAATTAGATTATATTCAAATCATTAAACTTGAGCCAGGGAGCTATAAGTCCTCAGGGCTTGCCAAAACAGAATTATTCATATCCAAAGAATGTGTTTCAAACATTTTTTCAACTAAATAATGTCTGGc > 2:5738991/1‑140 (MQ=255)
tatTACAATTAGATTATATTCAAATCATTAACCTTGAGCCAGGGAGCTATAAGTCCTCAGGGCTTGCCAAAACAGAATTATTCAGATCCAAAGAATGTGTTTCAAACATTTTTTCAACTAAATAATGTCTGGCTTGTTCg < 1:7181153/140‑1 (MQ=255)
taaaaTTAGATTATATTCAAATCATTAAACTTGAGCCAGGGAGCTATTATTCCTCAGGGCTTGCCAAAACAGAATTATTCATTTACAAAGAATGTGTTTCAAACATTTTTTCAACTAAATAATGTCTGGCTTGTTCGCAg < 2:6380764/137‑1 (MQ=255)
tataTTCAAATCATTAAACTTGAGCCAGGGAGCTNTAAGTCCTCAGGGCTTGCCAAAACAGAATTATTCATATCCAAAGAATGTGTTTCAAACATTTTTTCAACTAAATAATGTCTGGCNTGTTCGCAGATTTCGTTAAc < 1:5738991/140‑1 (MQ=255)
tatTCAAATCATTAAACTTGAGCCAGGGAGCTATAAGTCCTCAGGGCTTGCCAAAACAGAATTATTCATATCCAAAGAATGTGTTTCAAACATTTTTTCAACTAAATAATGTCTGGCTTGTTCGCAGATTTCGTTAACCt > 2:1312621/1‑140 (MQ=255)
ttCAAATCATTAAACTTGAGCCAGGGAGCTATAAGTCCTCAGGGCTTGCCAAAACAGAATTATTCATATCCAAAGAATGTGTTTCAAACATTTTTTCAACTAAATAATGTCTGGCTTGTTCGCAGATTTCGtt > 1:4572949/1‑133 (MQ=255)
ttCAAATCATTAAACTTGAGCCAGGGAGCTATAAGTCCTCAGGGCTTGCCAAAACAGAATTATTCATATCCAAAGAATGTGTTTCAAACATTTTTTCAACTAAATAATGTCTGGCTTGTTCGCAGATTTCGtt < 2:4572949/133‑1 (MQ=255)
ttCAAATCATTAAACTTGAGCCAGGGAGCTATAAGTCCTCAGGGCTTGCCAAAACAGAATTATTCATATCCAAAGAATGTGTTTCAAACATTTTTTCAACTAAATAATGTCTGGCTTGTTCGCAGATTTCGTTAACCTTg > 1:4210648/1‑140 (MQ=255)
ttCAAATCATTAAACTTGAGCCAGGGAGCTATAAGTCCTCAGGGCTTGCCAAAACAGAATTATTCATATCCAAAGAATGTGTTTCAAACATTTTTTCAACTAAATAATGTCTGGCTTGTTCGAAGATTTCGTTAACCTTg > 2:4858430/1‑140 (MQ=255)
cAAATCATTAAACTTGAGCCAGGGAGCTATAAGTCCTCAGGGCTTGCCAAAACAGAATTATTCATATCCAAAGAATGTGTTTCAAACATTTTTTCAACTAAATAATGTCTGGCTTGTTCGCAGATTTCGTTAACCTTGTc < 2:4210648/140‑1 (MQ=255)
aaaTCATTAAACTTGAGCCAGGGAGCTATAAGTCCTCAGGGCTTGCCAAAACAGAATTATTCATATCCAAAGAATGTGTTTCAAACATTTTTTCAACTAAATAATGTCTGGCTTGTTCGCAGATTTCGTTAACCTTGTCa > 1:4210204/1‑140 (MQ=255)
aTCATTAAACTTGAGCCAGGGAGCTATAAGTCCTCAGGGCTTGCCAAAACAGAATTATTCATATCCAAAGAATGTGTTTCAAACATTTTTTCAACTAAATAATGTCTGGCTTGTTCGCAGATTTCGTTAACCTTGTCAgg > 1:5430301/1‑140 (MQ=255)
aTTAAACTTGAGCCAGGGAGCTATAAGTCCTCAGGGCTTGCCAAAACAGAATTATTCATATCCAAAGAAtgtg < 2:2143598/73‑1 (MQ=255)
aTTAAACTTGAGCCAGGGAGCTATAAGTCCTCAGGGCTTGCCAAAACAGAATTATTCATATCCAAAGAAtgtg > 1:2143598/1‑73 (MQ=255)
aTTAAACTTGAGCCAGGGAGCTATAAGTCCTCAGGGCTTGCCAAAACAGAATTATTCATATCCAAAGAATGTGTTTCAAACATTTTTTCAACTAAATAATGTCTGGCTTGTTCGCAGATTTCGTTAACCTTGTCAGGGga > 1:4742610/1‑140 (MQ=255)
tAAACTTGAGCCAGGGAGCTATAAGTCCTCAGGGCTTGCCAAAACAGAATTATTCATATCCAAAGAATGTGTTTCAAACATTTTTTCAACTAAATAATGTCTGGCTTGTTCGCAGATTTCGtt > 2:7283218/1‑123 (MQ=255)
tAAACTTGAGCCAGGGAGCTATAAGTCCTCAGGGCTTGCCAAAACAGAATTATTCATATCCAAAGAATGTGTTTCAAACATTTTTTCAACTAAATAATGTCTGGCTTGTTCGCAGATTTCGtt < 1:7283219/123‑1 (MQ=255)
aGGGAGCTATAAGTCCTCAGGGCTTGCCAAAACAGAATTATTCATATCCAAAGAATGTGTTTCAAACATTTTTTCAACTAAATAATGTCTGGCTTGTTCGCAGATTTCGTTAACCTTGTCAGGGGAGAAACAATGattat < 2:5565903/140‑1 (MQ=255)
gggAGCTATAAGTCCTCAGGGCTTGCCAAAACAGAATTATTCATATcc < 2:2961148/48‑1 (MQ=255)
gggAGCTATAAGTCCTCAGGGCTTGCCAAAACAGAATTATTCATATcc < 2:2960906/48‑1 (MQ=255)
gggAGCTATAAGTCCTCAGGGCTTGCCAAAACAGAATTATTCATATcc > 1:2961148/1‑48 (MQ=255)
gggAGCTATAAGTCCTCAGGGCTTGCCAAAACAGAATTATTCATATcc > 1:2960906/1‑48 (MQ=255)
ggAGCTATAAGTCCTCAGGGCTTGCCAAAACAGAATTATTCATATCCAAAGAATGTGTTTCAAACATTTTTTCAACTAAATAATGTCTGGCTTGTTCGCAGATTTCGTTAACCTTGTCAGGGgaga > 2:2196356/1‑126 (MQ=255)
ggAGCTATAAGTCCTCAGGGCTTGCCAAAACAGAATTATTCATATCCAAAGAATGTGTTTCAAACATTTTTTCAACTAAATAATGTCTGGCTTGTTCGCAGATTTCGTTAACCTTGTCAGGGgaga < 1:2196356/126‑1 (MQ=255)
ggAGCTATAAGTCCTCAGGGCTTGCCAAAACAGAATTATTCATATCCAAAGAATGTGTTTCAAACATTTTTTCAACTAAATAATGTCTGGCTTGTTCGCAGATTTCGTTAACCTTGTCAGGGGAGAAACAATGAttatta > 1:7566130/1‑140 (MQ=255)
ggAGCTATAAGTCCTCAGGGCTTGCCAAAACAGAATTATTCATATCCAAAGAATGTGTTTCAAACATTTTTTCAACTAAATAATGTCTGGCTTGTTCGCAGATTTCGTTAACCTTGTCAGGGGAGAAACAATGAttatta > 1:7566115/1‑140 (MQ=255)
|
TGAAATAATAATGAAATATAATTAAAAATAAAATTTTTGCGTAAAAAAAATACCACAGGCATTAAAAAATCATGAGATGATTAAAATATTACAATTAGATTATATTCAAATCATTAAACTTGAGCCAGGGAGTTATAAGTCCTCAGGGCTTGCCAAAACAGAATTATTCATATCCAAAGAATGTGTTTCAAACATTTTTTCAACTAAATAATGTCTGGCTTGTTCGCAGATTTCGTTAACCTTGTCAGGGGAGAAACAATGATTATTA > NZ_CP025268/2997488‑2997755
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GAATACATTGATGAAATAATAATGAAATATAATTAAAAATAAAATTTTTGCGTAAAAAAAATACCACAGGCATTAAAAAATCATGAGATGATTAAAATATTACAATTAGATTATATTCAAATCATTAAACTTGAGCCAGGGAGTTATAAGTCCTCAGGGCTTGCCAAAACAGAATTATTCATATCCAAAGAATGTGTTTCAAACATTTTTTCAACTAAATAATGTCTGGCTTGTTCGCAGATTTCGTTAACCTTGTCAGGGGAGAAACAATGATTATTAATTAAATATTGCTCA > NZ_CP025268/2997477‑2997770
|
cccccccccccccccccccccccccccccccccccccccttttcaagcagaagacggcatacgagatgtagagaggtctcgtgggctcggagatgtgtataagagacAGATTATATTCAAATCATTAAACTTGAGCCAGGGAGCTATAAGT < SRR14920197.9920668/44‑1 (MQ=60)
ccccccccccccccccccccccccccccccccccccccccccatttcaagccgaagacggcatacgagatgtagagaggtctcgtgggctcggagatgtgtataagagacagATATTCAAATCATTAAACTTGAGCCAGGGAGCTATAAGT < SRR14920197.3614541/39‑1 (MQ=60)
ccccccccccccccccccccccccccccccccccccccccacttttcaagcagaagacggcatacgagatgtagagaggtctcgtgggctcggagatgtgtataagagacagATATTCAAATCATTAAACTTGAGCCAGGGAGCTATAAGT < SRR14920197.3614089/39‑1 (MQ=60)
GAATACATTGATGAAATAATAATGAAATATAATTAAAAATAAAATTTTTGCGT‑AAAAAAATACCACAGGCATTAAAAAATCATGAGATGATTAAAATATTACAATTAGATTATATTCAAATCATTAAACTTGAGCCAGGGAGCTATAAGTC > SRR14920197.5808653/1‑151 (MQ=60)
ccccccccccccccccccccccccccccccccccccccccccttttcaagcagaagacggcatactagatgtagagaggtctcgtgggctcggagatgtgtataagagacagTCATTAAACTTGAGCCAGGGAGCTATAAGTCCTCAGGGC < SRR14920197.2938334/39‑1 (MQ=60)
GATGAAATAATAATGAAATATAATTAAAAATAAAATTTTTGCGT‑AAAAAAATACCACAGGCATTAAAAAATCATGAGATGATTAAAATATTACAATTAGATTATATTCAAATCATTAAACTTGAGCCAGGGAGCTATAAGTCCTCAGGTCT > SRR14920197.4473028/1‑151 (MQ=60)
GATGAAATAATAATGAAATATAATTAAAAATAAAATTTTTGCGT‑AAAAAAATACCACAGGCATTAAAAAATCATGAGATGATTAAAATATTACAATTAGATTATATTCAAATCATTAAACTTGAGCCAGGGAGCTATAAGTCCTCAGGTCT > SRR14920197.4472373/1‑151 (MQ=60)
ATAATAATGAAATATAATTAAAAATAAAATTTTTGCGT‑AAAAAAACACCACAGGCATTAAAAAATCATGAGATGATTAAAATATTACAATTAGATTATATTCAAATCATTAAACTTGAGCCAGGGAGCTATAAGTCCTCAGGGCTTGCCAA > SRR14920197.1638013/1‑151 (MQ=60)
cccccccccctttttcaagcagaagacggcatacgagatgtagagaggtctcgtgggctcggagatgtgtataagagacagCATTAAACTTGAGCCAGGGAGCTATAAGTCCTCAGGGCTTGCCAAAACAGAATTATTCATATCCAAAGAA < SRR14920197.2977054/70‑1 (MQ=60)
ATTAAAAAATCATGAGATGATTAAAATATTACAATTAGATTATATTCAAATCATTAAACTTGAGCCAGGGAGCTATAAGTCCTCAGGGCTTGCCAAAACAGAATTATTCATATCCAAAGAATGTGTTTCAAACATTTTTTCAACTAAATAA < SRR14920197.9502671/151‑1 (MQ=60)
ATTAAAAAATCATGAGATGATTAAAATATTACAATTAGATTATATTCAAATCATTAAACTTGAGCCAGGGAGCTATAAGTCCTCAGGGCTTGCCAAAACAGAATTATTCATATCCAAAGAATGTGTTTCAAACATTTTTTCAACTAAATAA < SRR14920197.10466893/151‑1 (MQ=60)
TATTACAATTAGATTATATTCAAATCATTAACCTTGAGCCAGGGAGCTATAAGTCCTCAGGGCTTGCCAAAACAGAATTATTCAGATCCAAAGAATGTGTTTCAAACATTTTTTCAACTAAATAATGTCTGGCTTGTTCGCAGATTTCGTT < SRR14920197.7491721/151‑1 (MQ=60)
ATTAGATTATATTCAAATCATTAAACTTGAGCCAGGGAGCTATAAGTCCTCAGGGCTTGCCAAAACAGAATTATTCATATCCAAAGAATGTGTTTCAAACATTTTTTCAACTAAATAATGTCTGGCTTGTTCGCAGATTTCGTTAACCTTG > SRR14920197.4771626/1‑151 (MQ=60)
ATTAGATTATATTCAAATCATTAAACTTGAGCCAGGGAGCTATAAGTCCTCAGGGCTTGCCAAAACAGAATTATTCATATCCAAAGAATGTGTTTCAAACATTTTTTCAACTAAATAATGTCTGGCTTGTTCGCAGATTTCGTTAACCTTG > SRR14920197.4393880/1‑151 (MQ=60)
AGATTATATTCAAATCATTAAACTTGAGCCAGGGAGCTATAAGTCCTCAGGGCTTGCCAAAACAGAATTATTCATATCCAAAGAATGTGTTTCAAACATTTTTTCAACTAAATAATGTCTGGCTTGTTCGCAGATTTCGTTAACCTTGTCA > SRR14920197.4393419/1‑151 (MQ=60)
agacagATTCAAATCATTAAACTTGAGCCAGGGAGCTATAAGTCCTCAGGGCTTGCCAAAACAGAATTATTCATATCCAAAGAATGTGTTTCAAACATTTTTTCAACTAAATAATGTCTGGCTTGTTCGCAGATTTCGTTAACCTTGTCAG < SRR14920197.7597825/145‑1 (MQ=60)
ATTATATTCAAATCATTAAACTTGAGCCAGGGAGCTATAAGTCCTgtctcttatacacatctccgagcccacgagacctctctacatctcgtatgccgtcttctgcttgaaaagggggggggggggggggggggggggggggggggggggg > SRR14920197.7124174/1‑45 (MQ=60)
ATTATATTCAAATCATTAAACTTGAGCCAGGGAGCTATAAGTCCTgtctcttatacacatctccgagcccacgagacctctctacatctcgtatgccgtcttctgcttgaaaagggggggggggggggggggggggggggggggggggggg > SRR14920197.2825324/1‑45 (MQ=60)
ATTATATTCAAATCATTAAACTTGAGCCAGGGAGCTATAAGTCCTCAGGGCTTGCCAAAACAGAATTATTCATATCCAAAGAATGTGTTTCAAACATTTTTTCAACTAAATAATGTCTGGCTTGTTCGCAGATTTCGTTAACCTTGTCAGG > SRR14920197.5667140/1‑151 (MQ=60)
TATATTCAAATCATTAAACTTGAGCCNGGGAGCTNTAAGTCCTCAGGGCTTGCCAAAACAGAATTATTCATATCCAAAGAATGTGTTTCAAACATTTTTTCAACTAAATAATGTCTGGCNTGTTCGCAGATTTCGTTAACCTTGTCAGGGG < SRR14920197.5989000/151‑1 (MQ=60)
ATATTCAAATCATTAAACTTGAGCCAGGGAGCTATAAGTCCTCAGGGCTTGCCAAAACAGAATTATTCATATCCAAAGAATGTGTTTCAAACATTctgtctcttatacacatctccgagcccacgagacctctctacatctcgtatgccgt > SRR14920197.2237163/1‑95 (MQ=60)
ATATTCAAATCATTAAACTTGAGCCAGGGAGCTATAAGTCCTCAGGGCTTGCCAAAACAGAATTATTCATATCCAAAGAATGTGTTTCAAACATTTTTTCAACTAAATAATGTCTGGCTTGTTCGCAGATTTCGTTAACCTTGTCAGGGGA > SRR14920197.4948165/1‑151 (MQ=60)
cagACTTGAGCCAGGGAGCTATAAGTCCTCAGGGCTTGCCAAAACAGAATTATTCATATCCAAAGAATGTGTTTCAAACATTTTTTCAACTAAATAATGTCTGGCTTGTTCGCAGATTTCGTTAACCTTGTCAGGGGAGAAACAATGATTA < SRR14920197.2292348/148‑1 (MQ=60)
AACTTGAGCCAGGGAGCTATAAGTCCTCAGGGCTTGCCAAAACAGAATTATTCATATCCAAAGAATGTGTctgtctcttatacacatctccgagcccacgagacctctctacatctcgtatgccgtcttctgcttgaaatggggggggggg > SRR14920197.3090067/1‑70 (MQ=60)
AACTTGAGCCAGGGAGCTATAAGTCCTCAGGGCTTGCCAAAACAGAATTATTCATATCCAAAGAATGTGTctgtctcttatacacatctccgagcccacgagacctctctacatctcgtatgccgtcttctgctggaaacggggggggggg > SRR14920197.3089816/1‑70 (MQ=60)
ACTTGAGCCAGGGAGCTATAAGTCCTCAGGGCTTGCCAAAACAGAATTATTCATATCCAAAGAATGTGTTTCAAACATTTTTTCAACTAAATAATGTCTGGCTTGTTCGCAGATTTCGTTAACCTTGTCAGGGGAGAAACAATGATTATTA > SRR14920197.7892357/1‑151 (MQ=60)
ACTTGAGCCAGGGAGCTATAAGTCCTCAGGGCTTGCCAAAACAGAATTATTCATATCCAAAGAATGTGTTTCAAACATTTTTTCAACTAAATAATGTCTGGCTTGTTCGCAGATTTCGTTAACCTTGTCAGGGGAGAAACAATGATTATTA > SRR14920197.7892342/1‑151 (MQ=60)
AGCCAGGGAGCTATAAGTCCTCAGGGCTTGCCAAAACctgtctcttatacacatctccgagcccacgagacctctctacatctcgtatgccgtcttctgcttgaaaagggggggggggggggggggggggggggggggggggggggggggg > SRR14920197.6280548/1‑37 (MQ=60)
GGGAGCTATAAGTCCTCAGGGCTTGCCAAAACAGAATTATTCATATCCAAAGAATGctgtctcttatacacatctccgagcccacgagacctctctacatctcgtatgccgtcttctgcttgaaaaggggggggggggggggggggggggg > SRR14920197.5429048/1‑56 (MQ=60)
AGCTATAAGTCCTCAGGGCTTGCCAAAACAGAATTATTCATATCCAAAGAATGTGTTTCAAACATTTTTTCAACTAAATAATGTCTGGCTTGTTCGCAGATTTCGTTAACCTTGTCAGGGGAGAAACAATGATTATTActgtctcttatac > SRR14920197.5920932/1‑138 (MQ=60)
AGCTATAAGTCCTCAGGGCTTGCCAAAACAGAATTATTCATATCCAAAGAATGTGTTTCAAACATTTTTTCAACTAAATAATGTCTGGCTTGTTCGCAGATTTCGTTAACCTTGTCAGGGGAGAAACAATGATTATTAATTAAATATTGCT > SRR14920197.3261413/1‑151 (MQ=60)
GCTATAAGTCCTCAGGGCTTGCCAAAACAGAATTATTCATATCCAAAGAActgtctcttatacacatctccgagcccacgagacctctctacatctcgtatgccgtcttctgcttgaaaatgggggggggggggggggggggggggggggg > SRR14920197.411360/1‑50 (MQ=60)
GCTATAAGTCCTCAGGGCTTGCCAAAACAGAATTATTCATATCCAAAGAActgtctcttatacacatctccgagcccacgagacctctctacatctcgtatgccgtcttctgcttgaaaaggggggggggggggggggggggggggggggg > SRR14920197.84335/1‑50 (MQ=60)
GCTATAAGTCCTCAGGGCTTGCCAAAACAGAATTATTCATATCCAAAGAActgtctcttatacacatctccgagcccacgagacctctctacatctcgtatgccgtcttctgcttgaaaaggggggggggggggggggggggggggggggg > SRR14920197.412228/1‑50 (MQ=60)
GCTATAAGTCCTCAGGGCTTGCCAAAACAGAATTATTCATATCCAAAGAActgtctcttatacacatctccgagcccacgagacctctctacatctcgtatgccgtcttctgcttgaaaaagggggggggggggggggggggggggggggg > SRR14920197.2359811/1‑50 (MQ=60)
GCTATAAGTCCTCAGGGCTTGCCAAAACAGAATTATTCATATCCAAAGAATGctgtctcttatacacatctccgagcccacgagacctctctacatctcgtatgccgtcttctgcttgaaaagtggggggggggggggggggggggggggg > SRR14920197.11327809/1‑52 (MQ=60)
GCTATAAGTCCTCAGGGCTTGCCAAAACAGAATTATTCATATCCAAAGAATGTGTTTCAAACATTTTTTCAACTAAATAATGTCTGGCTTGTTCGCAGATTTCGTTAACCTTGTCAGGGGAGAAACAATGATTATTAATTAAATATTGCTC > SRR14920197.2831430/1‑151 (MQ=60)
CTATAAGTCCTCAGGGCTTGCCAAAACAGAATTATTCATATCCAAAGAATGTGTTTCAAACATTTTTTCAACTAAATAATGTCTGtctcttatacacatctccgagcccacgagacctctctacatctcgtatgccgtcttctgcttgaaa > SRR14920197.2504644/1‑85 (MQ=60)
CTATAAGTCCTCAGGGCTTGCCAAAACAGAATTATTCATATCCAAAGAATGTGTTTCAAACATTTTTTCAACTAAATAATGTCTGGCTTGTTCGCAGATTTCGTTAACCTTGTCAGGGGAGAAACAATGATctgtctcttatacacatctc > SRR14920197.2697048/1‑131 (MQ=60)
CTATAAGTCCTCAGGGCTTGCCAAAACAGAATTATTCATATCCAAAGAATGTGTTTCAAACATTTTTTCAACTAAATAATGTCTGGCTTGTTCGCAGATTTCGTTAACCTTGTCAGGGGAGAAACAATGATTATctgtctcttatacacat > SRR14920197.9855590/1‑134 (MQ=60)
CTATAAGTCCTCAGGGCTTGCCAAAACAGAATTATTCATATCCAAAGAATGTGTTTCAAACATTTTTTCAACTAAATAATGTCTGGCTTGTTCGCAGATTTCGTTAACCTTGTCAGGGGAGAAACAATGATTATTAATTAAATATTGCTCA > SRR14920197.1757847/1‑151 (MQ=60)
|
GAATACATTGATGAAATAATAATGAAATATAATTAAAAATAAAATTTTTGCGTAAAAAAAATACCACAGGCATTAAAAAATCATGAGATGATTAAAATATTACAATTAGATTATATTCAAATCATTAAACTTGAGCCAGGGAGTTATAAGTCCTCAGGGCTTGCCAAAACAGAATTATTCATATCCAAAGAATGTGTTTCAAACATTTTTTCAACTAAATAATGTCTGGCTTGTTCGCAGATTTCGTTAACCTTGTCAGGGGAGAAACAATGATTATTAATTAAATATTGCTCA > NZ_CP025268/2997477‑2997770
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
