Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F50 I1 R1	775	316.5	10245680	97.2%	9958800	138.8

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NZ_CP025268	2,466,923	(C)_8→9	intergenic (+242/‑123)	fadL → / → CXP41_RS12955	long‑chain fatty acid transporter FadL/protein YfdF

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP025268	2,466,915	1	.	C	94.8%	419.9 / 15.6	136	intergenic (+234/‑131)	fadL/CXP41_RS12955	long‑chain fatty acid transporter FadL/protein YfdF
Reads supporting (aligned to +/- strand): ref base . (0/7); new base C (12/115); total (12/124)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 171 total aligned reads displayed.

TTGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑CC‑C‑CC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATATATATTTGTAACAAATCAATCAAAA  >  NZ_CP025268/2466778‑2467033

ttGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑cc                                                                                                                         >  1:1019616/1‑140 (MQ=255)

ttGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑cc                                                                                                                         >  1:1019589/1‑140 (MQ=255)

 tGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑cc‑c                                                                                                                       <  1:865367/140‑1 (MQ=255)

 tGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑cc‑c                                                                                                                       <  2:2013432/140‑1 (MQ=255)

 tGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑cc‑c                                                                                                                       <  2:2571955/140‑1 (MQ=255)

 tGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑cc‑c                                                                                                                       <  2:2587901/140‑1 (MQ=255)

 tGCAAACAACATGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACCAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTCCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATCCT‑‑cc‑c                                                                                                                       <  2:3754949/140‑1 (MQ=255)

  ccaaccggCCTCTTGCCAGCTGCCCCTTTCAAATCAATAACCGGTACCCACAACCAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCGGCCCGTCCTCCCCAAAGAGTTTACTTTTCTGCATTCCCAGGATAcc‑‑cc‑c‑c                                                                                                                     <  2:682656/133‑1 (MQ=255)

     aaCAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑cc‑c‑cc‑cc                                                                                                                 <  2:5093455/140‑1 (MQ=255)

     aaCAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑cc‑c‑cc‑cc                                                                                                                 <  1:3904351/140‑1 (MQ=255)

     aaCAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑cc‑c‑cc‑cc                                                                                                                 <  1:1247132/140‑1 (MQ=255)

     aaCAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑cc‑c‑cc‑cc                                                                                                                 <  1:2354048/140‑1 (MQ=255)

      aCAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑cc‑c‑cc‑ccc                                                                                                                <  2:4892166/140‑1 (MQ=255)

       cAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGAGACT‑‑cc‑c‑cc‑cccc                                                                                                               <  2:1383981/140‑2 (MQ=255)

       cAGCCTGTTGGCAGCTTGCCCTTTCAAATAAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAACGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑cc‑c‑cc‑cccc                                                                                                               <  2:170575/140‑2 (MQ=255)

       cAGCCTGTTGGCAGCTTGCCCTTCCAAATCAATAACCGGTATCCACAGCCAAACCTAAAGGGAAAGGCATTTTTTCAGGCGTTCTGCCCGTCCTTCCCAAAGAGTTTCCTTTTCTGCTTTCCCAGGATCCT‑‑cc‑c‑cc‑cccc                                                                                                               <  2:1727510/140‑2 (MQ=255)

        aGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑cc‑c‑cc‑cccct                                                                                                              <  2:1866859/140‑3 (MQ=255)

          ccTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATCCT‑‑cc‑c‑cc‑cccctgg                                                                                                            <  1:3419970/140‑5 (MQ=255)

          ccTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑cc‑c‑cc‑cccctgg                                                                                                            <  1:1889368/140‑5 (MQ=255)

          ccTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTAGCCCCAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑cc‑c‑cc‑cccctgg                                                                                                            <  2:282656/140‑5 (MQ=255)

            tGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CC‑C‑CC‑CCCTGGCt                                                                                                           <  1:3311790/140‑1 (MQ=255)

              ttGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAATGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CC‑C‑CC‑CCCTGGCTAt                                                                                                         <  2:3841222/140‑1 (MQ=255)

                ggCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CC‑C‑CC‑CCCTGGCTATtg                                                                                                       <  1:5065065/140‑1 (MQ=255)

                ggCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CC‑C‑CC‑CCCTGGCTATtg                                                                                                       <  1:5064411/140‑1 (MQ=255)

                ggCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CC‑C‑CC‑CCCTGGCTATtg                                                                                                       <  1:2707736/140‑1 (MQ=255)

                  cAGCTTGCCCTTTCAAATCAATCAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CC‑C‑CC‑CCCTGGCTATtgtg                                                                                                     <  2:4629283/140‑1 (MQ=255)

                  cAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CC‑C‑CC‑CCCTGGCTATtgtg                                                                                                     <  1:1997654/140‑1 (MQ=255)

                  cAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CC‑C‑CC‑CCCTGGCTATtgtg                                                                                                     <  1:2755030/140‑1 (MQ=255)

                  cAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CC‑C‑CC‑CCCTGGCTATtgtg                                                                                                     <  1:2866661/140‑1 (MQ=255)

                  cAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CC‑C‑CC‑CCCTGGCTATtgtg                                                                                                     <  1:415405/140‑1 (MQ=255)

                    gcgtGCCCGTTCAAATCAATAAGCGGTATCCACAGACAAACCGCACGGGAAAGGCATATTTTCAGGCGTTCTGCTCGCCCTTCTCAAAAAGTTTCCTTGTCTGCATTTCCAGGATACTC‑CC‑C‑CC‑CCCTGGCGATTGTgcg                                                                                                   <  2:1567840/137‑1 (MQ=255)

                    gcctGCCCTTTCAAATCAATAACCGGTATCCCCAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CC‑C‑CC‑CCCTGGCTATTGTgcg                                                                                                   <  2:4936737/137‑1 (MQ=255)

                    gCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CC‑C‑CC‑CCCTGGCTATTGTgcg                                                                                                   <  1:3322789/140‑1 (MQ=255)

                    gCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CC‑C‑CC‑CCCTGGCTATTGTgcg                                                                                                   <  1:130597/140‑1 (MQ=255)

                       tGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CC‑C‑CC‑CCCTGGCTATTGTGCGCTc                                                                                                <  2:2884167/140‑1 (MQ=255)

                         cccTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CC‑C‑CC‑CCCTGGCTATTGTGCGCTCAt                                                                                              <  2:3777425/140‑1 (MQ=255)

                          ccTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CC‑C‑CC‑CCCTGGCTATTGTGCGCTCATa                                                                                             <  1:1043266/140‑1 (MQ=255)

                          ccTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CC‑C‑CC‑CCCTGGCTATTGTGCGCTCATa                                                                                             <  2:3959975/140‑1 (MQ=255)

                          ccTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CC‑C‑CC‑CCCTGGCTATTGTGCGCTCATa                                                                                             <  1:4331905/140‑1 (MQ=255)

                              tCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CC‑C‑CC‑CCCTGGCTATTGTGCGCTCATACACt                                                                                         <  1:4687254/140‑1 (MQ=255)

                              tCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CC‑C‑CC‑CCCTGGCTATTGTGCGCTCATACACt                                                                                         >  2:576049/1‑140 (MQ=255)

                              tCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CC‑C‑CC‑CCCTGGCTATTGTGCGCTCATACACt                                                                                         <  1:2550974/140‑1 (MQ=255)

                               cAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CC‑C‑CC‑CCCTGGCTATTGTGCGCTCATACACTc                                                                                        <  1:4171006/140‑1 (MQ=255)

                               cAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CC‑C‑CC‑CCCTGGCTATTGTGCGCTCATACACTc                                                                                        <  2:3731709/140‑1 (MQ=255)

                                  aTCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CC‑C‑CC‑CCCTGGCTATTGTGCGCTCATACACTCaaa                                                                                     <  1:3862068/140‑1 (MQ=255)

                                     aaTAAGCGGTATCCACAGACAAAGCTGAAGGGAAAGGCATCTTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CC‑C‑CC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTa                                                                                  <  1:4689952/140‑1 (MQ=255)

                                     aaTAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CC‑C‑CC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTa                                                                                  <  2:918650/140‑1 (MQ=255)

                                     aaTAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CC‑C‑CC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTa                                                                                  <  1:3835108/140‑1 (MQ=255)

                                          tcgttATCTACATACAAACCTGAAGGGAAAGGCATGTTTTCTGGCGTCCTGCTCGTCCTTTCCAAAGATGTTACTTTTCTTCATCGCCAGGATACT‑‑CCTC‑TC‑CCCTGGCCCTTGTGCGCCCATTCACTCAACTTaaattt                                                                             <  2:1829499/136‑4 (MQ=255)

                                          gaggTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTGTCAGGATACT‑‑CC‑CTCC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGAt                                                                             <  2:1838474/138‑1 (MQ=255)

                                          gCGGTATCCACAGACAAACCTGAAGGGAAAGGCATCTTTTCAGGCGTTCTGCCCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CC‑C‑CC‑CCCTGGCTATTGTGCGCCCATACACTCAAATTAAAGAt                                                                             <  2:4051320/140‑1 (MQ=255)

                                          gCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CC‑C‑CC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGAt                                                                             <  1:598570/140‑1 (MQ=255)

                                          gCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CC‑C‑CC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGAt                                                                             <  2:857960/140‑1 (MQ=255)

                                          gCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CC‑C‑CC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGAt                                                                             <  1:1330219/140‑1 (MQ=255)

                                          gCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CC‑C‑CC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGAt                                                                             <  1:2622590/140‑1 (MQ=255)

                                          gCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CC‑C‑CC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGAt                                                                             <  1:2956620/140‑1 (MQ=255)

                                           cGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCCCC‑C‑CC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGAt                                                                             <  1:3557708/140‑1 (MQ=255)

                                               aTCCACAGACACACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CC‑C‑CC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGtt                                                                        <  2:4313393/140‑1 (MQ=255)

                                               aTCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGTATACTC‑CC‑C‑CC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGtt                                                                        <  2:3399099/140‑1 (MQ=255)

                                               aTCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CC‑C‑CC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGtt                                                                        <  1:1108566/140‑1 (MQ=255)

                                               aTCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CC‑C‑CC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGtt                                                                        <  1:285531/140‑1 (MQ=255)

                                                        cAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CC‑C‑CC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCtaaataaa                                                               >  1:1508521/1‑140 (MQ=255)

                                                            ccTGATGGGAAAGGGATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTCCATTTCCAGGATACTC‑CC‑C‑CC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAg                                                           <  2:4503125/140‑1 (MQ=255)

                                                            ccTGAAGGTAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAATAGTTTACTTTTCTGCATTTCCAGGATACTC‑CC‑C‑CC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAg                                                           <  2:4539999/140‑1 (MQ=255)

                                                            ccTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CC‑C‑CC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAg                                                           >  2:3267810/1‑140 (MQ=255)

                                                               gAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CC‑C‑CC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGt                                                        >  1:3381841/1‑140 (MQ=255)

                                                                aaGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CC‑C‑CC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGtt                                                       <  2:4454303/140‑1 (MQ=255)

                                                                 aGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CC‑C‑CC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGttt                                                      >  1:2591335/1‑140 (MQ=255)

                                                                     aaaGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CC‑C‑CC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTg                                                  <  2:3679353/140‑1 (MQ=255)

                                                                      aaGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CC‑C‑CC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGa                                                 <  2:695697/140‑1 (MQ=255)

                                                                      aaGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CC‑C‑CC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGa                                                 <  2:2278085/140‑1 (MQ=255)

                                                                      aaGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CC‑C‑CC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGa                                                 <  1:2231479/140‑1 (MQ=255)

                                                                      aaGGCATATTTTCAGGCGTTCTGCTCGTCCTGCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CC‑C‑CC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGa                                                 <  1:1620737/140‑1 (MQ=255)

                                                                        ggCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CC‑C‑CC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATa                                               <  1:1094564/140‑1 (MQ=255)

                                                                         gCATATTTTCAGGCCTTCTGCTCGTCCTTCTCAAAGAGCTTACTTTTCTGCATTTCCAGGATACTC‑CC‑C‑CC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTACAGATAGGTTCTACATAAATGAGCGTTTTTTGATAg                                              <  1:194025/140‑1 (MQ=255)

                                                                          cATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CC‑C‑CC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGt                                             <  1:4403802/140‑1 (MQ=255)

                                                                          cATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CC‑C‑CC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGt                                             <  2:3257690/140‑1 (MQ=255)

                                                                            tatTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CC‑C‑CC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCt                                           <  1:3742955/140‑1 (MQ=255)

                                                                            tatTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑CC‑C‑CC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTa                                          <  1:3590984/140‑1 (MQ=255)

                                                                              ttttCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCCCC‑C‑CC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTa                                          <  2:3918109/140‑1 (MQ=255)

                                                                                  cAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CC‑C‑CC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCa                                     <  2:1019589/140‑1 (MQ=255)

                                                                                  cAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CC‑C‑CC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCa                                     <  1:4692334/140‑1 (MQ=255)

                                                                                  cAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CC‑C‑CC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCa                                     <  2:1019706/140‑1 (MQ=255)

                                                                                   aGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CC‑C‑CC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCa                                     >  1:1645013/1‑139 (MQ=255)

                                                                                   aGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CC‑C‑CC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCAt                                    >  2:4469707/1‑140 (MQ=255)

                                                                                    ggCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CC‑C‑CC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCAtt                                   <  2:1407156/140‑1 (MQ=255)

                                                                                     gCGTTCTGCTCGTCCTTCTCAAATAGTTTACTTTTCTGCATTTCCAGGATACTC‑CC‑C‑CC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTa                                  <  2:4043554/140‑1 (MQ=255)

                                                                                     gCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CC‑C‑CC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTa                                  <  2:336767/140‑1 (MQ=255)

                                                                                     gCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CC‑C‑CC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTa                                  >  1:1306395/1‑140 (MQ=255)

                                                                                      cGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CC‑C‑CC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAg                                 <  1:704637/140‑1 (MQ=255)

                                                                                       gTTCTGCTCTCCTTTCTCAAAGAGTTTACTTTTCTTCATTTCCAGGATTCT‑‑CC‑C‑CCTCCCTGGCTATTGTGCGCTCATACACTCAAATTTAAGATAGGTTCTAAGTAAATGAGCGTTTTTTGACAGTCTATTTCATTAgg                                <  2:2768038/140‑1 (MQ=255)

                                                                                       gTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CC‑C‑CC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAgg                                <  1:2378611/140‑1 (MQ=255)

                                                                                       cttCCGCTCGTCCTTCCCCAAGAGTTTACTCTTCTGCATTTCCAGGATACTC‑CC‑C‑CC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAgg                                <  2:3914099/139‑1 (MQ=255)

                                                                                         tCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CC‑C‑CC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTa                              <  2:349439/140‑1 (MQ=255)

                                                                                         tCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CC‑C‑CC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTa                              <  2:3381841/140‑1 (MQ=255)

                                                                                         tCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CC‑C‑CC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTa                              <  2:4120039/140‑1 (MQ=255)

                                                                                             cTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CC‑C‑CC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAg                                                           <  1:2352268/107‑1 (MQ=255)

                                                                                             cTCGCCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CC‑C‑CC‑CCCTGGCTATTGTGCGCTCATACACTCCAATCAAAGATAGGTTCTAAATAAATGCGCGTTTTTTGATAGTCTATTTCATTAGGTAatat                          <  2:2790068/140‑1 (MQ=255)

                                                                                                                     tttCTGCATTTCCAGGATACTC‑CC‑C‑CC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATATATATTTGTAACAAATCAATCaaaa  <  2:1618044/140‑1 (MQ=255)

                                                                                                                     tttCTGCATTTCCAGGATACTC‑CC‑C‑CC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATATATATTTGTAACAAATCAATCaaaa  <  2:3093161/140‑1 (MQ=255)

TTGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑CC‑C‑CC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATATATATTTGTAACAAATCAATCAAAA  >  NZ_CP025268/2466778‑2467033

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

GAGTTTTGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑CCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATATATATTTGTAACAAATCAATCAAAATGGAATAAAATCATGCTACCATCTATTTC  >  NZ_CP025268/2466773‑2467062

GAGTTTTGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑CCCCCCCC                                                                                                                                             <  SRR14920169.2461781/151‑1 (MQ=60)

GAGTTTTGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑CCCCCCCC                                                                                                                                             <  SRR14920169.2461927/151‑1 (MQ=60)

GAGTTTTGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑CCCCCCCC                                                                                                                                             <  SRR14920169.4699392/151‑1 (MQ=60)

GAGTTTGGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑CCCCCCCC                                                                                                                                             <  SRR14920169.4974487/151‑1 (MQ=60)

 AGTTTTGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑CCCCCCCCC                                                                                                                                            <  SRR14920169.2354353/151‑1 (MQ=60)

 AGTTTTGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑CCCCCCCCC                                                                                                                                            <  SRR14920169.1882989/151‑1 (MQ=60)

      TGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCCCTGGCT                                                                                                                                        <  SRR14920169.3424014/151‑1 (MQ=60)

      TGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCCCTGGCT                                                                                                                                        <  SRR14920169.3275909/151‑1 (MQ=60)

      TGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCCCTGGCT                                                                                                                                        <  SRR14920169.867342/151‑1 (MQ=60)

       GCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGGTTACTTTTCTGCATTTCCAGGATACTCCCCCCCCCCTGGCT                                                                                                                                        <  SRR14920169.1163156/151‑1 (MQ=60)

        CAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCCCTGGCTAT                                                                                                                                      <  SRR14920169.3888651/151‑1 (MQ=60)

          AACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCCCTGGCTATTG                                                                                                                                    <  SRR14920169.2359101/151‑1 (MQ=60)

          AACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCCCTGGCTATTG                                                                                                                                    <  SRR14920169.2359301/151‑1 (MQ=60)

          AACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCCCTGGCTATTG                                                                                                                                    <  SRR14920169.3913685/151‑1 (MQ=60)

          AACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCCCTGGCTATTG                                                                                                                                    <  SRR14920169.1249900/151‑1 (MQ=60)

               CCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATCCTC‑CCCCCCCCTGGCTATTGTGCGC                                                                                                                               <  SRR14920169.3427900/151‑1 (MQ=60)

               CCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCCCTGGCTATTGTGCGC                                                                                                                               <  SRR14920169.1754810/151‑1 (MQ=60)

               CCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCCCTGGCTATTGTGCGC                                                                                                                               <  SRR14920169.1893625/151‑1 (MQ=60)

                 TGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCCCTGGCTATTGTGCGCTC                                                                                                                             <  SRR14920169.3319553/151‑1 (MQ=60)

                     GGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCCCTGGCTATTGTGCGCTCATAC                                                                                                                         <  SRR14920169.2713752/151‑1 (MQ=60)

                     GGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCCCTGGCTATTGTGCGCTCATAC                                                                                                                         <  SRR14920169.5076412/151‑1 (MQ=60)

                     GGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCCCTGGCTATTGTGCGCTCATAC                                                                                                                         <  SRR14920169.5077066/151‑1 (MQ=60)

                     GGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCCCTGGCTATGGTGCGCTCATAC                                                                                                                         <  SRR14920169.2061716/151‑1 (MQ=60)

                       CAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCCCTGGCTATTGTGCGCTCATACAC                                                                                                                       <  SRR14920169.2761148/151‑1 (MQ=60)

                       CAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCCCTGGCTATTGTGCGCTCATACAC                                                                                                                       <  SRR14920169.2873389/151‑1 (MQ=60)

                       CAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCCCTGGCTATTGTGCGCTCATACAC                                                                                                                       <  SRR14920169.2873542/151‑1 (MQ=60)

                       CAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCCCTGGCTATTGTGCGCTCATACAC                                                                                                                       <  SRR14920169.416373/151‑1 (MQ=60)

                       CAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCCCTGGCTATTGTGCGCTCATACAC                                                                                                                       <  SRR14920169.1265155/151‑1 (MQ=60)

                       CAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCCCTGGCTATTGTGCGCTCATACAC                                                                                                                       <  SRR14920169.1534778/151‑1 (MQ=60)

                       CAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCCCTGGCTATTGTGCGCTCATACAC                                                                                                                       <  SRR14920169.2002226/151‑1 (MQ=60)

                         GCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCCCTGGCTATTGTGCGCTCATACACTC                                                                                                                     <  SRR14920169.3330568/151‑1 (MQ=60)

                         GCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCCCTGGCTATTGTGCGCTCATACACTC                                                                                                                     <  SRR14920169.130935/151‑1 (MQ=60)

                         GCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCCCTGGCTATTGTGCGCTCATACACTC                                                                                                                     <  SRR14920169.1898481/151‑1 (MQ=60)

                         GCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCCCTGGCTATTGTGCGCTCATACACTC                                                                                                                     <  SRR14920169.576413/151‑1 (MQ=60)

                               CCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTA                                                                                                               <  SRR14920169.4342391/151‑1 (MQ=60)

                               CCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTA                                                                                                               <  SRR14920169.1045625/151‑1 (MQ=60)

                                   TCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGA                                                                                                           <  SRR14920169.2556640/151‑1 (MQ=60)

                                   TCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGA                                                                                                           <  SRR14920169.4698653/151‑1 (MQ=60)

                                    CAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGAT                                                                                                          <  SRR14920169.661233/151‑1 (MQ=60)

                                    CAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGAT                                                                                                          <  SRR14920169.4181058/151‑1 (MQ=60)

                                    CAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGAT                                                                                                          <  SRR14920169.2774701/151‑1 (MQ=60)

                                       ATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGG                                                                                                       <  SRR14920169.3871262/151‑1 (MQ=60)

                                          AATAAGCGGTATCCACAGACAAAGCTGAAGGGAAAGGCATCTTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTC                                                                                                    <  SRR14920169.4701354/151‑1 (MQ=60)

                                          AATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTC                                                                                                    <  SRR14920169.3844243/151‑1 (MQ=60)

                                               GCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAAT                                                                                               <  SRR14920169.599980/151‑1 (MQ=60)

                                               GCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAAT                                                                                               <  SRR14920169.2700666/151‑1 (MQ=60)

                                               GCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAAT                                                                                               <  SRR14920169.2963526/151‑1 (MQ=60)

                                               GCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAAT                                                                                               <  SRR14920169.4722917/151‑1 (MQ=60)

                                               GCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAAT                                                                                               <  SRR14920169.1333159/151‑1 (MQ=60)

                                               GCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAAT                                                                                               <  SRR14920169.2628383/151‑1 (MQ=60)

                                                CGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCCCCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAAT                                                                                               <  SRR14920169.3565853/151‑1 (MQ=60)

                                                  GTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAA                                                                                            >  SRR14920169.1511913/1‑151 (MQ=60)

                                                    ATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATG                                                                                          <  SRR14920169.804065/151‑1 (MQ=60)

                                                    ATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATG                                                                                          <  SRR14920169.286208/151‑1 (MQ=60)

                                                    ATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATG                                                                                          <  SRR14920169.1111058/151‑1 (MQ=60)

                                                    ATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTGCTGCATTTCCTGGATGCTG‑CCCCCCCCTGGCTATTGTGCGCTCAGACACTCAAATTAAAGGTAGGTTCTAAATAAATG                                                                                          <  SRR14920169.2731723/151‑1 (MQ=60)

                                                         CAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGT                                                                                     >  SRR14920169.3389707/1‑151 (MQ=60)

                                                           GACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTT                                                                                   >  SRR14920169.2597080/1‑151 (MQ=60)

                                                           GACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTT                                                                                   >  SRR14920169.2596217/1‑151 (MQ=60)

                                                                 cggagatgtgtataagagacagCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGAT                                                                             <  SRR14920169.2357521/129‑1 (MQ=60)

                                                                 CCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGAT                                                                             <  SRR14920169.1342911/151‑1 (MQ=60)

                                                                 CCTGAAGGGAAAGGCATAGTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGAT                                                                             <  SRR14920169.4396671/151‑1 (MQ=60)

                                                                       GGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTGCTAAATAAATGAGCGTTTTTTGATAGTCTA                                                                       >  SRR14920169.2349408/1‑151 (MQ=60)

                                                                           AAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTC                                                                   <  SRR14920169.2236510/151‑1 (MQ=60)

                                                                           AAGGCATATTTTCAGGCGTTCTGCTCGTCCTGCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCGATTTC                                                                   <  SRR14920169.1624356/151‑1 (MQ=60)

                                                                            aggcatcatttcacgccttcttctcgtcactttcaaagcgttttccttttcgtcttttccggatacctcCCCCCCCCTGGCTATTGTGCTCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTC                                                                   <  SRR14920169.2093551/82‑1 (MQ=60)

                                                                             TGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCAT                                                                 <  SRR14920169.1096795/151‑1 (MQ=60)

                                                                             GGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCAT                                                                 <  SRR14920169.1097012/151‑1 (MQ=60)

                                                                             GGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCAT                                                                 >  SRR14920169.1648688/1‑151 (MQ=60)

                                                                              GCATATTTTCAGGCCTTCTGCTCGTCCTTCTCAAAGAGCTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTACAGATAGGTTCTACATAAATGAGCGTTTTTTGATAGTCTATTTCATT                                                                <  SRR14920169.194495/151‑1 (MQ=60)

                                                                               CATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTA                                                               >  SRR14920169.1309247/1‑151 (MQ=60)

                                                                               CATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTA                                                               <  SRR14920169.4414405/151‑1 (MQ=60)

                                                                                 TATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGG                                                             <  SRR14920169.3799045/151‑1 (MQ=60)

                                                                                 TATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGG                                                             <  SRR14920169.3751810/151‑1 (MQ=60)

                                                                                 TATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑CCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGT                                                            <  SRR14920169.3599196/151‑1 (MQ=60)

                                                                                       CAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATAT                                                       <  SRR14920169.4703740/151‑1 (MQ=60)

                                                                                       CAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATAT                                                       <  SRR14920169.4702750/151‑1 (MQ=60)

                                                                                       CAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATAT                                                       <  SRR14920169.3352401/151‑1 (MQ=60)

                                                                                        AGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑CCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATATAT                                                     <  SRR14920169.3684680/151‑1 (MQ=60)

                                                                                          GCGTTCTGTTCGTCCTTCTCAAATAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCCCTGGCTATTGTCCGCTCATACACTCAAATTAGAGATAGGTTCTAAATCAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATATATA                                                    <  SRR14920169.2872948/151‑1 (MQ=60)

                                                                                           CGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATATATAT                                                   <  SRR14920169.1330734/151‑1 (MQ=60)

                                                                                           CGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATATATAT                                                   <  SRR14920169.706295/151‑1 (MQ=60)

                                                                                            GTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATATATATT                                                  <  SRR14920169.2513712/151‑1 (MQ=60)

                                                                                            GTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATATATATT                                                  <  SRR14920169.2383916/151‑1 (MQ=60)

                                                                                              TCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATATATATTTG                                                <  SRR14920169.4052489/151‑1 (MQ=60)

                                                                                                  CTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATATATATTTGTAAC                                            <  SRR14920169.4282409/151‑1 (MQ=60)

                                                                                                         TTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATATATATTTGTAACAAATCAA                                     >  SRR14920169.3545096/1‑151 (MQ=60)

                                                                                                            TCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑CCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATATATATTTGTAACAAATCAATCA                                  <  SRR14920169.4594610/151‑1 (MQ=60)

                                                                                                                                           TACTC‑CCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATATATATTTGTAACAAATCAATCAAAATGGAATAAAATCATGCTACCATCTATTT   <  SRR14920169.975887/151‑1 (MQ=60)

                                                                                                                                            ACTC‑CCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATATATATTTGTAACAAATCAATCAAAATGGAATAAAATCATGCTACCATCTATTTC  <  SRR14920169.3275501/151‑1 (MQ=60)

GAGTTTTGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑CCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATATATATTTGTAACAAATCAATCAAAATGGAATAAAATCATGCTACCATCTATTTC  >  NZ_CP025268/2466773‑2467062

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`